2025-10-11T03:59:56,828 Created temporary directory: /tmp/pip-ephem-wheel-cache-44a8m12h
2025-10-11T03:59:56,830 Created temporary directory: /tmp/pip-build-tracker-07n5bzyy
2025-10-11T03:59:56,831 Initialized build tracking at /tmp/pip-build-tracker-07n5bzyy
2025-10-11T03:59:56,831 Created build tracker: /tmp/pip-build-tracker-07n5bzyy
2025-10-11T03:59:56,832 Entered build tracker: /tmp/pip-build-tracker-07n5bzyy
2025-10-11T03:59:56,833 Created temporary directory: /tmp/pip-wheel-d92qwhni
2025-10-11T03:59:56,836 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2025-10-11T03:59:56,838 Created temporary directory: /tmp/pip-ephem-wheel-cache-sfovc6q3
2025-10-11T03:59:56,859 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2025-10-11T03:59:56,862 2 location(s) to search for versions of automorphotrack:
2025-10-11T03:59:56,862 * https://pypi.org/simple/automorphotrack/
2025-10-11T03:59:56,862 * https://www.piwheels.org/simple/automorphotrack/
2025-10-11T03:59:56,863 Fetching project page and analyzing links: https://pypi.org/simple/automorphotrack/
2025-10-11T03:59:56,864 Getting page https://pypi.org/simple/automorphotrack/
2025-10-11T03:59:56,865 Found index url https://pypi.org/simple
2025-10-11T03:59:57,004 Fetched page https://pypi.org/simple/automorphotrack/ as application/vnd.pypi.simple.v1+json
2025-10-11T03:59:57,006   Skipping link: No binaries permitted for automorphotrack: https://files.pythonhosted.org/packages/07/76/7ed16ee4e7915539ecdaf863830495610ee6c4a075b1e35da95d4e758e72/AutoMorphoTrack-1.0.0-py3-none-any.whl (from https://pypi.org/simple/automorphotrack/) (requires-python:>=3.9)
2025-10-11T03:59:57,007   Found link https://files.pythonhosted.org/packages/16/8a/039014d575bcba42961419f4014a907b1b22c7dc5abe6991b40c02f96530/AutoMorphoTrack-1.0.0.tar.gz (from https://pypi.org/simple/automorphotrack/) (requires-python:>=3.9), version: 1.0.0
2025-10-11T03:59:57,008   Skipping link: No binaries permitted for automorphotrack: https://files.pythonhosted.org/packages/65/81/e83d4fd743032f0849fe18c0f2cdbd7bb26a0d77bb53eb2f08e8548a306d/automorphotrack-1.0.5-py3-none-any.whl (from https://pypi.org/simple/automorphotrack/) (requires-python:>=3.9)
2025-10-11T03:59:57,009   Found link https://files.pythonhosted.org/packages/22/92/9c0273d9ed1abd0d29864432161e7176d4cd0e3fc73f6855995e62b2b60f/automorphotrack-1.0.5.tar.gz (from https://pypi.org/simple/automorphotrack/) (requires-python:>=3.9), version: 1.0.5
2025-10-11T03:59:57,010 Fetching project page and analyzing links: https://www.piwheels.org/simple/automorphotrack/
2025-10-11T03:59:57,010 Getting page https://www.piwheels.org/simple/automorphotrack/
2025-10-11T03:59:57,012 Found index url https://www.piwheels.org/simple
2025-10-11T03:59:57,175 Fetched page https://www.piwheels.org/simple/automorphotrack/ as text/html
2025-10-11T03:59:57,176 Skipping link: not a file: https://www.piwheels.org/simple/automorphotrack/
2025-10-11T03:59:57,176 Skipping link: not a file: https://pypi.org/simple/automorphotrack/
2025-10-11T03:59:57,195 Given no hashes to check 1 links for project 'automorphotrack': discarding no candidates
2025-10-11T03:59:57,213 Collecting automorphotrack==1.0.5
2025-10-11T03:59:57,215   Created temporary directory: /tmp/pip-unpack-vvgtu7nb
2025-10-11T03:59:57,429   Downloading automorphotrack-1.0.5.tar.gz (14 kB)
2025-10-11T03:59:57,478   Added automorphotrack==1.0.5 from https://files.pythonhosted.org/packages/22/92/9c0273d9ed1abd0d29864432161e7176d4cd0e3fc73f6855995e62b2b60f/automorphotrack-1.0.5.tar.gz to build tracker '/tmp/pip-build-tracker-07n5bzyy'
2025-10-11T03:59:57,480   Running setup.py (path:/tmp/pip-wheel-d92qwhni/automorphotrack_0fa8fc01ccef463ba53628cc96fb1aa1/setup.py) egg_info for package automorphotrack
2025-10-11T03:59:57,481   Created temporary directory: /tmp/pip-pip-egg-info-0eynssxj
2025-10-11T03:59:57,482   Preparing metadata (setup.py): started
2025-10-11T03:59:57,483   Running command python setup.py egg_info
2025-10-11T03:59:58,386   /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2025-10-11T03:59:58,387   !!

2025-10-11T03:59:58,388           ********************************************************************************
2025-10-11T03:59:58,388           Please consider removing the following classifiers in favor of a SPDX license expression:

2025-10-11T03:59:58,389           License :: OSI Approved :: MIT License

2025-10-11T03:59:58,390           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2025-10-11T03:59:58,391           ********************************************************************************

2025-10-11T03:59:58,391   !!
2025-10-11T03:59:58,392     self._finalize_license_expression()
2025-10-11T03:59:58,416   running egg_info
2025-10-11T03:59:58,443   creating /tmp/pip-pip-egg-info-0eynssxj/AutoMorphoTrack.egg-info
2025-10-11T03:59:58,444   writing /tmp/pip-pip-egg-info-0eynssxj/AutoMorphoTrack.egg-info/PKG-INFO
2025-10-11T03:59:58,448   writing dependency_links to /tmp/pip-pip-egg-info-0eynssxj/AutoMorphoTrack.egg-info/dependency_links.txt
2025-10-11T03:59:58,450   writing requirements to /tmp/pip-pip-egg-info-0eynssxj/AutoMorphoTrack.egg-info/requires.txt
2025-10-11T03:59:58,451   writing top-level names to /tmp/pip-pip-egg-info-0eynssxj/AutoMorphoTrack.egg-info/top_level.txt
2025-10-11T03:59:58,453   writing manifest file '/tmp/pip-pip-egg-info-0eynssxj/AutoMorphoTrack.egg-info/SOURCES.txt'
2025-10-11T03:59:58,540   reading manifest file '/tmp/pip-pip-egg-info-0eynssxj/AutoMorphoTrack.egg-info/SOURCES.txt'
2025-10-11T03:59:58,541   reading manifest template 'MANIFEST.in'
2025-10-11T03:59:58,543   warning: no files found matching 'LICENSE'
2025-10-11T03:59:58,543   warning: no files found matching 'requirements.txt'
2025-10-11T03:59:58,553   warning: no files found matching '*.csv' under directory 'automorphotrack'
2025-10-11T03:59:58,558   warning: no files found matching '*.txt' under directory 'automorphotrack'
2025-10-11T03:59:58,563   warning: no files found matching '*.ipynb' under directory 'automorphotrack'
2025-10-11T03:59:58,568   warning: no files found matching '*.png' under directory 'automorphotrack'
2025-10-11T03:59:58,573   warning: no files found matching '*.jpg' under directory 'automorphotrack'
2025-10-11T03:59:58,578   warning: no files found matching '*.tif' under directory 'automorphotrack'
2025-10-11T03:59:58,583   warning: no files found matching '*.json' under directory 'automorphotrack'
2025-10-11T03:59:58,584   warning: no previously-included files matching '__pycache__' found anywhere in distribution
2025-10-11T03:59:58,584   warning: no previously-included files matching '*.py[cod]' found anywhere in distribution
2025-10-11T03:59:58,585   warning: no previously-included files matching '.DS_Store' found anywhere in distribution
2025-10-11T03:59:58,585   adding license file 'LICENSE.md'
2025-10-11T03:59:58,588   writing manifest file '/tmp/pip-pip-egg-info-0eynssxj/AutoMorphoTrack.egg-info/SOURCES.txt'
2025-10-11T03:59:58,698   Preparing metadata (setup.py): finished with status 'done'
2025-10-11T03:59:58,703   Source in /tmp/pip-wheel-d92qwhni/automorphotrack_0fa8fc01ccef463ba53628cc96fb1aa1 has version 1.0.5, which satisfies requirement automorphotrack==1.0.5 from https://files.pythonhosted.org/packages/22/92/9c0273d9ed1abd0d29864432161e7176d4cd0e3fc73f6855995e62b2b60f/automorphotrack-1.0.5.tar.gz
2025-10-11T03:59:58,704   Removed automorphotrack==1.0.5 from https://files.pythonhosted.org/packages/22/92/9c0273d9ed1abd0d29864432161e7176d4cd0e3fc73f6855995e62b2b60f/automorphotrack-1.0.5.tar.gz from build tracker '/tmp/pip-build-tracker-07n5bzyy'
2025-10-11T03:59:58,710 Created temporary directory: /tmp/pip-unpack-kq6fro8y
2025-10-11T03:59:58,711 Building wheels for collected packages: automorphotrack
2025-10-11T03:59:58,716   Created temporary directory: /tmp/pip-wheel-vtdv73jw
2025-10-11T03:59:58,717   Building wheel for automorphotrack (setup.py): started
2025-10-11T03:59:58,718   Destination directory: /tmp/pip-wheel-vtdv73jw
2025-10-11T03:59:58,718   Running command python setup.py bdist_wheel
2025-10-11T03:59:59,536   /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2025-10-11T03:59:59,536   !!

2025-10-11T03:59:59,537           ********************************************************************************
2025-10-11T03:59:59,538           Please consider removing the following classifiers in favor of a SPDX license expression:

2025-10-11T03:59:59,539           License :: OSI Approved :: MIT License

2025-10-11T03:59:59,540           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2025-10-11T03:59:59,540           ********************************************************************************

2025-10-11T03:59:59,541   !!
2025-10-11T03:59:59,542     self._finalize_license_expression()
2025-10-11T03:59:59,542   running bdist_wheel
2025-10-11T03:59:59,673   running build
2025-10-11T03:59:59,673   running build_py
2025-10-11T03:59:59,704   creating build/lib/automorphotrack
2025-10-11T03:59:59,707   copying automorphotrack/colocalization.py -> build/lib/automorphotrack
2025-10-11T03:59:59,709   copying automorphotrack/morphology.py -> build/lib/automorphotrack
2025-10-11T03:59:59,711   copying automorphotrack/summary.py -> build/lib/automorphotrack
2025-10-11T03:59:59,713   copying automorphotrack/motility.py -> build/lib/automorphotrack
2025-10-11T03:59:59,716   copying automorphotrack/shape_profiling.py -> build/lib/automorphotrack
2025-10-11T03:59:59,718   copying automorphotrack/tracking.py -> build/lib/automorphotrack
2025-10-11T03:59:59,720   copying automorphotrack/lyso_count.py -> build/lib/automorphotrack
2025-10-11T03:59:59,722   copying automorphotrack/tracking_overlay.py -> build/lib/automorphotrack
2025-10-11T03:59:59,724   copying automorphotrack/utils.py -> build/lib/automorphotrack
2025-10-11T03:59:59,726   copying automorphotrack/__init__.py -> build/lib/automorphotrack
2025-10-11T03:59:59,728   copying automorphotrack/shape_features.py -> build/lib/automorphotrack
2025-10-11T03:59:59,730   copying automorphotrack/detection.py -> build/lib/automorphotrack
2025-10-11T03:59:59,732   running egg_info
2025-10-11T03:59:59,758   writing AutoMorphoTrack.egg-info/PKG-INFO
2025-10-11T03:59:59,762   writing dependency_links to AutoMorphoTrack.egg-info/dependency_links.txt
2025-10-11T03:59:59,764   writing requirements to AutoMorphoTrack.egg-info/requires.txt
2025-10-11T03:59:59,765   writing top-level names to AutoMorphoTrack.egg-info/top_level.txt
2025-10-11T03:59:59,794   reading manifest file 'AutoMorphoTrack.egg-info/SOURCES.txt'
2025-10-11T03:59:59,797   reading manifest template 'MANIFEST.in'
2025-10-11T03:59:59,798   warning: no files found matching 'LICENSE'
2025-10-11T03:59:59,799   warning: no files found matching 'requirements.txt'
2025-10-11T03:59:59,808   warning: no files found matching '*.csv' under directory 'automorphotrack'
2025-10-11T03:59:59,813   warning: no files found matching '*.txt' under directory 'automorphotrack'
2025-10-11T03:59:59,818   warning: no files found matching '*.ipynb' under directory 'automorphotrack'
2025-10-11T03:59:59,823   warning: no files found matching '*.png' under directory 'automorphotrack'
2025-10-11T03:59:59,828   warning: no files found matching '*.jpg' under directory 'automorphotrack'
2025-10-11T03:59:59,834   warning: no files found matching '*.tif' under directory 'automorphotrack'
2025-10-11T03:59:59,839   warning: no files found matching '*.json' under directory 'automorphotrack'
2025-10-11T03:59:59,839   warning: no previously-included files matching '__pycache__' found anywhere in distribution
2025-10-11T03:59:59,840   warning: no previously-included files matching '*.py[cod]' found anywhere in distribution
2025-10-11T03:59:59,841   warning: no previously-included files matching '.DS_Store' found anywhere in distribution
2025-10-11T03:59:59,842   adding license file 'LICENSE.md'
2025-10-11T03:59:59,844   writing manifest file 'AutoMorphoTrack.egg-info/SOURCES.txt'
2025-10-11T03:59:59,874   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2025-10-11T03:59:59,874   !!

2025-10-11T03:59:59,876           ********************************************************************************
2025-10-11T03:59:59,876           Please avoid running ``setup.py`` directly.
2025-10-11T03:59:59,876           Instead, use pypa/build, pypa/installer or other
2025-10-11T03:59:59,877           standards-based tools.

2025-10-11T03:59:59,878           By 2025-Oct-31, you need to update your project and remove deprecated calls
2025-10-11T03:59:59,879           or your builds will no longer be supported.

2025-10-11T03:59:59,879           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2025-10-11T03:59:59,880           ********************************************************************************

2025-10-11T03:59:59,881   !!
2025-10-11T03:59:59,882     self.initialize_options()
2025-10-11T03:59:59,902   installing to build/bdist.linux-armv7l/wheel
2025-10-11T03:59:59,903   running install
2025-10-11T03:59:59,927   running install_lib
2025-10-11T03:59:59,954   creating build/bdist.linux-armv7l/wheel
2025-10-11T03:59:59,956   creating build/bdist.linux-armv7l/wheel/automorphotrack
2025-10-11T03:59:59,957   copying build/lib/automorphotrack/colocalization.py -> build/bdist.linux-armv7l/wheel/./automorphotrack
2025-10-11T03:59:59,960   copying build/lib/automorphotrack/morphology.py -> build/bdist.linux-armv7l/wheel/./automorphotrack
2025-10-11T03:59:59,962   copying build/lib/automorphotrack/summary.py -> build/bdist.linux-armv7l/wheel/./automorphotrack
2025-10-11T03:59:59,964   copying build/lib/automorphotrack/motility.py -> build/bdist.linux-armv7l/wheel/./automorphotrack
2025-10-11T03:59:59,966   copying build/lib/automorphotrack/shape_profiling.py -> build/bdist.linux-armv7l/wheel/./automorphotrack
2025-10-11T03:59:59,968   copying build/lib/automorphotrack/tracking.py -> build/bdist.linux-armv7l/wheel/./automorphotrack
2025-10-11T03:59:59,970   copying build/lib/automorphotrack/lyso_count.py -> build/bdist.linux-armv7l/wheel/./automorphotrack
2025-10-11T03:59:59,972   copying build/lib/automorphotrack/tracking_overlay.py -> build/bdist.linux-armv7l/wheel/./automorphotrack
2025-10-11T03:59:59,975   copying build/lib/automorphotrack/utils.py -> build/bdist.linux-armv7l/wheel/./automorphotrack
2025-10-11T03:59:59,976   copying build/lib/automorphotrack/__init__.py -> build/bdist.linux-armv7l/wheel/./automorphotrack
2025-10-11T03:59:59,978   copying build/lib/automorphotrack/shape_features.py -> build/bdist.linux-armv7l/wheel/./automorphotrack
2025-10-11T03:59:59,981   copying build/lib/automorphotrack/detection.py -> build/bdist.linux-armv7l/wheel/./automorphotrack
2025-10-11T03:59:59,982   running install_egg_info
2025-10-11T04:00:00,018   Copying AutoMorphoTrack.egg-info to build/bdist.linux-armv7l/wheel/./AutoMorphoTrack-1.0.5-py3.11.egg-info
2025-10-11T04:00:00,029   running install_scripts
2025-10-11T04:00:00,042   creating build/bdist.linux-armv7l/wheel/automorphotrack-1.0.5.dist-info/WHEEL
2025-10-11T04:00:00,045   creating '/tmp/pip-wheel-vtdv73jw/automorphotrack-1.0.5-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2025-10-11T04:00:00,047   adding 'automorphotrack/__init__.py'
2025-10-11T04:00:00,049   adding 'automorphotrack/colocalization.py'
2025-10-11T04:00:00,051   adding 'automorphotrack/detection.py'
2025-10-11T04:00:00,053   adding 'automorphotrack/lyso_count.py'
2025-10-11T04:00:00,055   adding 'automorphotrack/morphology.py'
2025-10-11T04:00:00,056   adding 'automorphotrack/motility.py'
2025-10-11T04:00:00,058   adding 'automorphotrack/shape_features.py'
2025-10-11T04:00:00,060   adding 'automorphotrack/shape_profiling.py'
2025-10-11T04:00:00,061   adding 'automorphotrack/summary.py'
2025-10-11T04:00:00,063   adding 'automorphotrack/tracking.py'
2025-10-11T04:00:00,064   adding 'automorphotrack/tracking_overlay.py'
2025-10-11T04:00:00,065   adding 'automorphotrack/utils.py'
2025-10-11T04:00:00,068   adding 'automorphotrack-1.0.5.dist-info/licenses/LICENSE.md'
2025-10-11T04:00:00,069   adding 'automorphotrack-1.0.5.dist-info/METADATA'
2025-10-11T04:00:00,070   adding 'automorphotrack-1.0.5.dist-info/WHEEL'
2025-10-11T04:00:00,071   adding 'automorphotrack-1.0.5.dist-info/top_level.txt'
2025-10-11T04:00:00,072   adding 'automorphotrack-1.0.5.dist-info/RECORD'
2025-10-11T04:00:00,073   removing build/bdist.linux-armv7l/wheel
2025-10-11T04:00:00,190   Building wheel for automorphotrack (setup.py): finished with status 'done'
2025-10-11T04:00:00,193   Created wheel for automorphotrack: filename=automorphotrack-1.0.5-py3-none-any.whl size=21636 sha256=f8fe25820d8ca48ad0cf19b490342e4a2150881af206d501c333e5d6b24aa9c5
2025-10-11T04:00:00,194   Stored in directory: /tmp/pip-ephem-wheel-cache-sfovc6q3/wheels/2e/6d/ac/9be9ab5de1e26f198b4d5d25a88d0a38d2c388779bdf6da334
2025-10-11T04:00:00,206 Successfully built automorphotrack
2025-10-11T04:00:00,209 Removed build tracker: '/tmp/pip-build-tracker-07n5bzyy'