2025-10-15T17:23:04,269 Created temporary directory: /tmp/pip-ephem-wheel-cache-s_blke5m
2025-10-15T17:23:04,271 Created temporary directory: /tmp/pip-build-tracker-qvfx_eiz
2025-10-15T17:23:04,272 Initialized build tracking at /tmp/pip-build-tracker-qvfx_eiz
2025-10-15T17:23:04,272 Created build tracker: /tmp/pip-build-tracker-qvfx_eiz
2025-10-15T17:23:04,272 Entered build tracker: /tmp/pip-build-tracker-qvfx_eiz
2025-10-15T17:23:04,273 Created temporary directory: /tmp/pip-wheel-hccojggo
2025-10-15T17:23:04,276 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2025-10-15T17:23:04,279 Created temporary directory: /tmp/pip-ephem-wheel-cache-tezwjepq
2025-10-15T17:23:04,300 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2025-10-15T17:23:04,304 2 location(s) to search for versions of datasets-bio:
2025-10-15T17:23:04,304 * https://pypi.org/simple/datasets-bio/
2025-10-15T17:23:04,304 * https://www.piwheels.org/simple/datasets-bio/
2025-10-15T17:23:04,305 Fetching project page and analyzing links: https://pypi.org/simple/datasets-bio/
2025-10-15T17:23:04,306 Getting page https://pypi.org/simple/datasets-bio/
2025-10-15T17:23:04,307 Found index url https://pypi.org/simple
2025-10-15T17:23:04,583 Fetched page https://pypi.org/simple/datasets-bio/ as application/vnd.pypi.simple.v1+json
2025-10-15T17:23:04,585   Found link https://files.pythonhosted.org/packages/4d/67/f62cb566721b49ebb0a79f545ab434ae4cab915cf8b99cceacbcd088c9e1/datasets_bio-0.1.0.tar.gz (from https://pypi.org/simple/datasets-bio/), version: 0.1.0
2025-10-15T17:23:04,586   Found link https://files.pythonhosted.org/packages/52/74/1174e8cbd318023705a96a3101a071fc58205bf02ef7548c35e1a4bf9991/datasets_bio-0.1.1.tar.gz (from https://pypi.org/simple/datasets-bio/), version: 0.1.1
2025-10-15T17:23:04,587   Found link https://files.pythonhosted.org/packages/9f/90/7fc6544222094603fd5f486e3fd1e1cdc7c001979326994a09e6317b4052/datasets_bio-0.1.2.tar.gz (from https://pypi.org/simple/datasets-bio/) (requires-python:>=3.7), version: 0.1.2
2025-10-15T17:23:04,588   Found link https://files.pythonhosted.org/packages/27/49/e886239dbd6e5a21587e9c7cff5e1612189e6e6a2ca199e72043c3612978/datasets_bio-0.1.3.tar.gz (from https://pypi.org/simple/datasets-bio/) (requires-python:<3.12,>=3.10), version: 0.1.3
2025-10-15T17:23:04,589   Skipping link: No binaries permitted for datasets-bio: https://files.pythonhosted.org/packages/6c/0e/bbec9c1deb72665b873c98fbefc7b8f28608e4dea7733f73326addd12d58/datasets_bio-0.1.4-cp311-cp311-manylinux_2_39_x86_64.whl (from https://pypi.org/simple/datasets-bio/) (requires-python:<3.12,>=3.10)
2025-10-15T17:23:04,590   Found link https://files.pythonhosted.org/packages/5f/ef/3fc3a24a76af8dd84a6891d6474e05fa7dfb01f5b95baff47b538c2c5064/datasets_bio-0.1.4.tar.gz (from https://pypi.org/simple/datasets-bio/) (requires-python:<3.12,>=3.10), version: 0.1.4
2025-10-15T17:23:04,591 Fetching project page and analyzing links: https://www.piwheels.org/simple/datasets-bio/
2025-10-15T17:23:04,592 Getting page https://www.piwheels.org/simple/datasets-bio/
2025-10-15T17:23:04,593 Found index url https://www.piwheels.org/simple
2025-10-15T17:23:04,773 Fetched page https://www.piwheels.org/simple/datasets-bio/ as text/html
2025-10-15T17:23:04,777   Skipping link: No binaries permitted for datasets-bio: https://archive1.piwheels.org/simple/datasets-bio/datasets_bio-0.1.3-py3-none-any.whl#sha256=a9022149a599d056fcc86001ccb43679899bc447a6760c4a208a3be21cd25b62 (from https://www.piwheels.org/simple/datasets-bio/) (requires-python:>=3.10,<3.12)
2025-10-15T17:23:04,778   Skipping link: No binaries permitted for datasets-bio: https://archive1.piwheels.org/simple/datasets-bio/datasets_bio-0.1.2-py3-none-any.whl#sha256=14bdbcd74e8339b535291ed5aa23a2b6201b1fb4884e586a7ff0cd451bd0c5d5 (from https://www.piwheels.org/simple/datasets-bio/) (requires-python:>=3.7)
2025-10-15T17:23:04,778   Skipping link: No binaries permitted for datasets-bio: https://archive1.piwheels.org/simple/datasets-bio/datasets_bio-0.1.1-py2.py3-none-any.whl#sha256=5a5c2c58671855b27dd07f4ddce998de077e63dd8d6cfa5044d24b10f95a2d38 (from https://www.piwheels.org/simple/datasets-bio/)
2025-10-15T17:23:04,779   Skipping link: No binaries permitted for datasets-bio: https://archive1.piwheels.org/simple/datasets-bio/datasets_bio-0.1.0-py2.py3-none-any.whl#sha256=a00dc036e9703995e27bfb0918b53f519796e1ad497b3846f9d40d9d808e3bac (from https://www.piwheels.org/simple/datasets-bio/)
2025-10-15T17:23:04,780 Skipping link: not a file: https://www.piwheels.org/simple/datasets-bio/
2025-10-15T17:23:04,781 Skipping link: not a file: https://pypi.org/simple/datasets-bio/
2025-10-15T17:23:04,809 Given no hashes to check 1 links for project 'datasets-bio': discarding no candidates
2025-10-15T17:23:04,827 Collecting datasets-bio==0.1.4
2025-10-15T17:23:04,829   Created temporary directory: /tmp/pip-unpack-6c8841wc
2025-10-15T17:23:05,053   Downloading datasets_bio-0.1.4.tar.gz (44.3 MB)
2025-10-15T17:23:14,170   Added datasets-bio==0.1.4 from https://files.pythonhosted.org/packages/5f/ef/3fc3a24a76af8dd84a6891d6474e05fa7dfb01f5b95baff47b538c2c5064/datasets_bio-0.1.4.tar.gz to build tracker '/tmp/pip-build-tracker-qvfx_eiz'
2025-10-15T17:23:14,178   Created temporary directory: /tmp/pip-build-env-lb_6p9jn
2025-10-15T17:23:14,182   Installing build dependencies: started
2025-10-15T17:23:14,183   Running command pip subprocess to install build dependencies
2025-10-15T17:23:15,311   Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11)
2025-10-15T17:23:15,902   DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2025-10-15T17:23:15,925   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2025-10-15T17:23:16,508   Collecting poetry-core>=1.0.0
2025-10-15T17:23:16,544     Using cached https://www.piwheels.org/simple/poetry-core/poetry_core-2.2.1-py3-none-any.whl (338 kB)
2025-10-15T17:23:18,340   Collecting Cython>=3.0.11
2025-10-15T17:23:18,362     Using cached cython-3.1.4-py3-none-any.whl (1.2 MB)
2025-10-15T17:23:19,339     Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/3a/be/650f9c091ef71cb01d735775d554e068752d3ff63d7943b26316dc401749/numpy-1.21.2.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11)
2025-10-15T17:23:19,346     Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/5f/d6/ad58ded26556eaeaa8c971e08b6466f17c4ac4d786cd3d800e26ce59cc01/numpy-1.21.3.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11)
2025-10-15T17:23:19,353     Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/fb/48/b0708ebd7718a8933f0d3937513ef8ef2f4f04529f1f66ca86d873043921/numpy-1.21.4.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11)
2025-10-15T17:23:19,360     Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/c2/a8/a924a09492bdfee8c2ec3094d0a13f2799800b4fdc9c890738aeeb12c72e/numpy-1.21.5.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11)
2025-10-15T17:23:19,367     Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/45/b7/de7b8e67f2232c26af57c205aaad29fe17754f793404f59c8a730c7a191a/numpy-1.21.6.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11)
2025-10-15T17:23:19,990   Collecting numpy>=1.22.4
2025-10-15T17:23:20,442     Using cached https://www.piwheels.org/simple/numpy/numpy-2.3.3-cp311-cp311-linux_armv7l.whl (6.1 MB)
2025-10-15T17:23:22,111   Collecting setuptools
2025-10-15T17:23:22,267     Using cached https://www.piwheels.org/simple/setuptools/setuptools-80.9.0-py3-none-any.whl (1.2 MB)
2025-10-15T17:23:25,362   Installing collected packages: setuptools, poetry-core, numpy, Cython
2025-10-15T17:23:39,037     Creating /tmp/pip-build-env-lb_6p9jn/overlay/local/bin
2025-10-15T17:23:39,040     changing mode of /tmp/pip-build-env-lb_6p9jn/overlay/local/bin/f2py to 755
2025-10-15T17:23:39,042     changing mode of /tmp/pip-build-env-lb_6p9jn/overlay/local/bin/numpy-config to 755
2025-10-15T17:23:42,207     changing mode of /tmp/pip-build-env-lb_6p9jn/overlay/local/bin/cygdb to 755
2025-10-15T17:23:42,209     changing mode of /tmp/pip-build-env-lb_6p9jn/overlay/local/bin/cython to 755
2025-10-15T17:23:42,212     changing mode of /tmp/pip-build-env-lb_6p9jn/overlay/local/bin/cythonize to 755
2025-10-15T17:23:42,249   Successfully installed Cython-3.1.4 numpy-2.3.3 poetry-core-2.2.1 setuptools-80.9.0
2025-10-15T17:23:42,682   Installing build dependencies: finished with status 'done'
2025-10-15T17:23:42,689   Getting requirements to build wheel: started
2025-10-15T17:23:42,690   Running command Getting requirements to build wheel
2025-10-15T17:23:43,165   Getting requirements to build wheel: finished with status 'done'
2025-10-15T17:23:43,168   Created temporary directory: /tmp/pip-modern-metadata-nedt7ni_
2025-10-15T17:23:43,171   Preparing metadata (pyproject.toml): started
2025-10-15T17:23:43,172   Running command Preparing metadata (pyproject.toml)
2025-10-15T17:23:43,888   Preparing metadata (pyproject.toml): finished with status 'done'
2025-10-15T17:23:43,892   Source in /tmp/pip-wheel-hccojggo/datasets-bio_d4f06e5093bb44fe922beddb43cf23ef has version 0.1.4, which satisfies requirement datasets-bio==0.1.4 from https://files.pythonhosted.org/packages/5f/ef/3fc3a24a76af8dd84a6891d6474e05fa7dfb01f5b95baff47b538c2c5064/datasets_bio-0.1.4.tar.gz
2025-10-15T17:23:43,893   Removed datasets-bio==0.1.4 from https://files.pythonhosted.org/packages/5f/ef/3fc3a24a76af8dd84a6891d6474e05fa7dfb01f5b95baff47b538c2c5064/datasets_bio-0.1.4.tar.gz from build tracker '/tmp/pip-build-tracker-qvfx_eiz'
2025-10-15T17:23:43,900 Created temporary directory: /tmp/pip-unpack-64ubvqen
2025-10-15T17:23:43,900 Building wheels for collected packages: datasets-bio
2025-10-15T17:23:43,905   Created temporary directory: /tmp/pip-wheel-2nfuhfzp
2025-10-15T17:23:43,905   Destination directory: /tmp/pip-wheel-2nfuhfzp
2025-10-15T17:23:43,907   Building wheel for datasets-bio (pyproject.toml): started
2025-10-15T17:23:43,909   Running command Building wheel for datasets-bio (pyproject.toml)
2025-10-15T17:23:59,259   Compiling src/bio_datasets/structure/pdbx/encoding.pyx because it changed.
2025-10-15T17:23:59,259   [1/1] Cythonizing src/bio_datasets/structure/pdbx/encoding.pyx
2025-10-15T17:26:33,037   Building wheel for datasets-bio (pyproject.toml): finished with status 'done'
2025-10-15T17:26:34,013   Created wheel for datasets-bio: filename=datasets_bio-0.1.4-cp311-cp311-manylinux_2_36_armv7l.whl size=46792200 sha256=364cb3447c8dc824b464cac28e10efa000481ad64f3659400792c720f257b307
2025-10-15T17:26:34,015   Stored in directory: /tmp/pip-ephem-wheel-cache-tezwjepq/wheels/7a/4c/d0/0187e68773f9427b1c9be392abd038534dba259a77e8b2e64d
2025-10-15T17:26:34,044 Successfully built datasets-bio
2025-10-15T17:26:36,042 Removed build tracker: '/tmp/pip-build-tracker-qvfx_eiz'