2025-10-15T18:55:47,994 Created temporary directory: /tmp/pip-build-tracker-fkfwvozb 2025-10-15T18:55:47,994 Initialized build tracking at /tmp/pip-build-tracker-fkfwvozb 2025-10-15T18:55:47,994 Created build tracker: /tmp/pip-build-tracker-fkfwvozb 2025-10-15T18:55:47,995 Entered build tracker: /tmp/pip-build-tracker-fkfwvozb 2025-10-15T18:55:47,995 Created temporary directory: /tmp/pip-wheel-217_er99 2025-10-15T18:55:47,998 Created temporary directory: /tmp/pip-ephem-wheel-cache-ukz5a2qp 2025-10-15T18:55:48,060 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-10-15T18:55:48,062 2 location(s) to search for versions of hic-straw: 2025-10-15T18:55:48,062 * https://pypi.org/simple/hic-straw/ 2025-10-15T18:55:48,062 * https://www.piwheels.org/simple/hic-straw/ 2025-10-15T18:55:48,063 Fetching project page and analyzing links: https://pypi.org/simple/hic-straw/ 2025-10-15T18:55:48,063 Getting page https://pypi.org/simple/hic-straw/ 2025-10-15T18:55:48,064 Found index url https://pypi.org/simple/ 2025-10-15T18:55:48,211 Fetched page https://pypi.org/simple/hic-straw/ as application/vnd.pypi.simple.v1+json 2025-10-15T18:55:48,215 Found link https://files.pythonhosted.org/packages/58/12/da9e47221a82011797d19832a2dbc8843b0a96c483874f17010b4921c993/hic-straw-0.0.6.tar.gz (from https://pypi.org/simple/hic-straw/), version: 0.0.6 2025-10-15T18:55:48,215 Skipping link: No binaries permitted for hic-straw: https://files.pythonhosted.org/packages/a4/89/1fc2a4e6d9b5379ac4ea0add62658d519095d22a8fef6feb32d1f6d04341/hic_straw-0.0.6-py3-none-any.whl (from https://pypi.org/simple/hic-straw/) 2025-10-15T18:55:48,216 Found link https://files.pythonhosted.org/packages/b4/b5/1784dd8b56f1c3242e4876a816515a453bfb302177900ba89315240e2d69/hic-straw-1.0.0.0.tar.gz (from https://pypi.org/simple/hic-straw/) (requires-python:>3.3), version: 1.0.0.0 2025-10-15T18:55:48,216 Skipping link: No binaries permitted for hic-straw: https://files.pythonhosted.org/packages/f4/64/b77b8acee62ce4088fde83fea0b45b61ac273f676453fc551a1e2402f1df/hic_straw-1.0.0.0-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,217 Found link https://files.pythonhosted.org/packages/33/d1/0cb9b1ea2021664d748177878ab9aaa3d6a87e5ab96c2579cf229477baa8/hic-straw-1.0.0.1.tar.gz (from https://pypi.org/simple/hic-straw/) (requires-python:>3.3), version: 1.0.0.1 2025-10-15T18:55:48,217 Skipping link: No binaries permitted for hic-straw: https://files.pythonhosted.org/packages/0f/27/74d140215ca8b246971566707e35c6865dd2076d59a1dcba4b21d20aed7f/hic_straw-1.0.0.1-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,217 Found link https://files.pythonhosted.org/packages/4e/98/5e25a075010114b063044296dcca74be78b27c94deb282b661c2c55f667e/hic-straw-1.1.0.tar.gz (from https://pypi.org/simple/hic-straw/) (requires-python:>3.3), version: 1.1.0 2025-10-15T18:55:48,217 Skipping link: No binaries permitted for hic-straw: https://files.pythonhosted.org/packages/ed/b6/9dd021f8ae8744255035c5eddcd68478db957480d3674ceb00abe95bc28d/hic_straw-1.1.0-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,218 Found link https://files.pythonhosted.org/packages/10/91/7678a69e8b1b3ff5a0aa603d3d81794a095db4aeb089574acc0ec78e768a/hic-straw-1.1.2.tar.gz (from https://pypi.org/simple/hic-straw/) (requires-python:>3.3), version: 1.1.2 2025-10-15T18:55:48,218 Skipping link: No binaries permitted for hic-straw: https://files.pythonhosted.org/packages/06/95/4601e73dfae01c423e39139874f8ac02a767d75b7e9dfb271d8e53abaa78/hic_straw-1.1.2-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,218 Found link https://files.pythonhosted.org/packages/a3/f1/19bb1d40f659e5daa98ba6a2d845c1203ec45661c1b855958643ccc37c66/hic-straw-1.1.3.tar.gz (from https://pypi.org/simple/hic-straw/) (requires-python:>3.3), version: 1.1.3 2025-10-15T18:55:48,218 Skipping link: No binaries permitted for hic-straw: https://files.pythonhosted.org/packages/75/c1/65991d0759ac4631dfd929121d30889d79b9937ada5197a0e77dcf4d5b4c/hic_straw-1.1.3-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,219 Found link https://files.pythonhosted.org/packages/90/c0/c8eb0d0ff42bc42a3d0858773bfe498eee073c873035440150c78b291b02/hic-straw-1.2.0.tar.gz (from https://pypi.org/simple/hic-straw/) (requires-python:>3.3), version: 1.2.0 2025-10-15T18:55:48,219 Skipping link: No binaries permitted for hic-straw: https://files.pythonhosted.org/packages/aa/9c/28b4a0dca05ef063fc28842e3dda8c5bbb6b048921f29e2462b7202324aa/hic_straw-1.2.0-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,219 Found link https://files.pythonhosted.org/packages/c5/59/79ef668fcb7ad3815ff1afd767c9421300ac4705f8f37d276a4053b97bbc/hic-straw-1.2.1.tar.gz (from https://pypi.org/simple/hic-straw/) (requires-python:>3.3), version: 1.2.1 2025-10-15T18:55:48,219 Skipping link: No binaries permitted for hic-straw: https://files.pythonhosted.org/packages/58/cf/b8be42b2c62d6296eb8951ac8867468dd4c516eca9b0fa62b0efe31ac4a9/hic_straw-1.2.1-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,220 Found link https://files.pythonhosted.org/packages/88/5d/e3ee3ae11156bae3729bba14c0670dc0e309653010d9280ae7fce980f4a5/hic-straw-1.3.0.tar.gz (from https://pypi.org/simple/hic-straw/) (requires-python:>3.3), version: 1.3.0 2025-10-15T18:55:48,220 Skipping link: No binaries permitted for hic-straw: https://files.pythonhosted.org/packages/69/32/41853a2ade089836f3049c828058a9cb66980f7bfa7d990d1b9790bdf64b/hic_straw-1.3.0-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,220 Found link https://files.pythonhosted.org/packages/8e/ec/431c76970f8973ea5937a9b5f2d1689a641b3fe6475246a32451274fa2dd/hic-straw-1.3.1.tar.gz (from https://pypi.org/simple/hic-straw/) (requires-python:>3.3), version: 1.3.1 2025-10-15T18:55:48,220 Skipping link: No binaries permitted for hic-straw: https://files.pythonhosted.org/packages/09/90/fa240ee10625db3d81901a1ce60f5302d43c81422db901d0f9931902d7d4/hic_straw-1.3.1-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,221 Fetching project page and analyzing links: https://www.piwheels.org/simple/hic-straw/ 2025-10-15T18:55:48,221 Getting page https://www.piwheels.org/simple/hic-straw/ 2025-10-15T18:55:48,222 Found index url https://www.piwheels.org/simple/ 2025-10-15T18:55:48,321 Fetched page https://www.piwheels.org/simple/hic-straw/ as text/html 2025-10-15T18:55:48,339 Skipping link: No binaries permitted for hic-straw: https://archive1.piwheels.org/simple/hic-straw/hic_straw-1.3.1-cp35-cp35m-linux_armv6l.whl#sha256=df13fa64d86a3f34d39f47d024145d2d52fe028bfd0ffe67d7dac97911b4508b (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,340 Skipping link: No binaries permitted for hic-straw: https://archive1.piwheels.org/simple/hic-straw/hic_straw-1.3.1-cp35-cp35m-linux_armv7l.whl#sha256=df13fa64d86a3f34d39f47d024145d2d52fe028bfd0ffe67d7dac97911b4508b (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,340 Skipping link: No binaries permitted for hic-straw: https://archive1.piwheels.org/simple/hic-straw/hic_straw-1.3.1-cp37-cp37m-linux_armv6l.whl#sha256=de78ccc4e40d042078c2bd084948fb806bc8ff9274bedf5baedee013ceac97e0 (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,340 Skipping link: No binaries permitted for hic-straw: https://archive1.piwheels.org/simple/hic-straw/hic_straw-1.3.1-cp37-cp37m-linux_armv7l.whl#sha256=de78ccc4e40d042078c2bd084948fb806bc8ff9274bedf5baedee013ceac97e0 (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,340 Skipping link: No binaries permitted for hic-straw: https://archive1.piwheels.org/simple/hic-straw/hic_straw-1.3.1-cp39-cp39-linux_armv6l.whl#sha256=15b954af8aed9705e991d4e51a2cacf7e65a4702fd4bb09c41205fec7ef6a26c (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,340 Skipping link: No binaries permitted for hic-straw: https://archive1.piwheels.org/simple/hic-straw/hic_straw-1.3.1-cp39-cp39-linux_armv7l.whl#sha256=15b954af8aed9705e991d4e51a2cacf7e65a4702fd4bb09c41205fec7ef6a26c (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,340 Skipping link: No binaries permitted for hic-straw: https://archive1.piwheels.org/simple/hic-straw/hic_straw-1.3.1-cp311-cp311-linux_armv6l.whl#sha256=5a17e420ecf338de1dbee854895d5f764a4cfd3cecb045cd0579565044828514 (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,341 Skipping link: No binaries permitted for hic-straw: https://archive1.piwheels.org/simple/hic-straw/hic_straw-1.3.1-cp311-cp311-linux_armv7l.whl#sha256=5a17e420ecf338de1dbee854895d5f764a4cfd3cecb045cd0579565044828514 (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,341 Skipping link: No binaries permitted for hic-straw: https://www.piwheels.org/simple/hic-straw/hic_straw-1.3.1-cp313-cp313-linux_armv6l.whl#sha256=f5e9425d10f91efb1f03bab5f241d7d414b5f797c489989466fd2928f476e75f (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,341 Skipping link: No binaries permitted for hic-straw: https://www.piwheels.org/simple/hic-straw/hic_straw-1.3.1-cp313-cp313-linux_armv7l.whl#sha256=f5e9425d10f91efb1f03bab5f241d7d414b5f797c489989466fd2928f476e75f (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,341 Skipping link: No binaries permitted for hic-straw: https://archive1.piwheels.org/simple/hic-straw/hic_straw-1.3.0-cp35-cp35m-linux_armv6l.whl#sha256=152dff3c09781f277d13095abd00d0447dbd94f19945778df8bd5719b9840d22 (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,341 Skipping link: No binaries permitted for hic-straw: https://archive1.piwheels.org/simple/hic-straw/hic_straw-1.3.0-cp35-cp35m-linux_armv7l.whl#sha256=152dff3c09781f277d13095abd00d0447dbd94f19945778df8bd5719b9840d22 (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,341 Skipping link: No binaries permitted for hic-straw: https://archive1.piwheels.org/simple/hic-straw/hic_straw-1.3.0-cp37-cp37m-linux_armv6l.whl#sha256=ca0c0edbe75c3caed5b5925f077f7789e924e057ba74039318575c6c21cbce07 (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,341 Skipping link: No binaries permitted for hic-straw: https://archive1.piwheels.org/simple/hic-straw/hic_straw-1.3.0-cp37-cp37m-linux_armv7l.whl#sha256=ca0c0edbe75c3caed5b5925f077f7789e924e057ba74039318575c6c21cbce07 (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,341 Skipping link: No binaries permitted for hic-straw: https://archive1.piwheels.org/simple/hic-straw/hic_straw-1.3.0-cp39-cp39-linux_armv6l.whl#sha256=2a8a3fb3af81b6cf1f3bbc9a71fdf7d4765d313851b29fdcc0bb5bfe62efe9b4 (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,342 Skipping link: No binaries permitted for hic-straw: https://archive1.piwheels.org/simple/hic-straw/hic_straw-1.3.0-cp39-cp39-linux_armv7l.whl#sha256=2a8a3fb3af81b6cf1f3bbc9a71fdf7d4765d313851b29fdcc0bb5bfe62efe9b4 (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,342 Skipping link: No binaries permitted for hic-straw: https://archive1.piwheels.org/simple/hic-straw/hic_straw-1.3.0-cp311-cp311-linux_armv6l.whl#sha256=7db6fcb72462e78c342fb319ec35c66ce7f5bab0817ea9cfa0bee8d8da65023d (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,342 Skipping link: No binaries permitted for hic-straw: https://archive1.piwheels.org/simple/hic-straw/hic_straw-1.3.0-cp311-cp311-linux_armv7l.whl#sha256=7db6fcb72462e78c342fb319ec35c66ce7f5bab0817ea9cfa0bee8d8da65023d (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,342 Skipping link: No binaries permitted for hic-straw: https://www.piwheels.org/simple/hic-straw/hic_straw-1.3.0-cp313-cp313-linux_armv6l.whl#sha256=ba31aed3249063486a9bfca19d64312cba55dd5cb2b5d59d9307525b2d6625f4 (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,342 Skipping link: No binaries permitted for hic-straw: https://www.piwheels.org/simple/hic-straw/hic_straw-1.3.0-cp313-cp313-linux_armv7l.whl#sha256=ba31aed3249063486a9bfca19d64312cba55dd5cb2b5d59d9307525b2d6625f4 (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,342 Skipping link: No binaries permitted for hic-straw: https://archive1.piwheels.org/simple/hic-straw/hic_straw-1.2.1-cp35-cp35m-linux_armv6l.whl#sha256=39f533f627b292a1dd1790ef951418bf80feb7cb19dc3d915eea04fabf2e2102 (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,342 Skipping link: No binaries permitted for hic-straw: https://archive1.piwheels.org/simple/hic-straw/hic_straw-1.2.1-cp35-cp35m-linux_armv7l.whl#sha256=39f533f627b292a1dd1790ef951418bf80feb7cb19dc3d915eea04fabf2e2102 (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,343 Skipping link: No binaries permitted for hic-straw: https://archive1.piwheels.org/simple/hic-straw/hic_straw-1.2.1-cp37-cp37m-linux_armv6l.whl#sha256=0aa787f65d29deea4a8c6030d66d04136b8c9f3cf0aba72fef3654396293736a (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,343 Skipping link: No binaries permitted for hic-straw: https://archive1.piwheels.org/simple/hic-straw/hic_straw-1.2.1-cp37-cp37m-linux_armv7l.whl#sha256=0aa787f65d29deea4a8c6030d66d04136b8c9f3cf0aba72fef3654396293736a (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,343 Skipping link: No binaries permitted for hic-straw: https://archive1.piwheels.org/simple/hic-straw/hic_straw-1.2.1-cp39-cp39-linux_armv6l.whl#sha256=b274d66f1ff272331ace048c42cf474d408194f2849ba2d6c6dfb86d601faada (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,343 Skipping link: No binaries permitted for hic-straw: https://archive1.piwheels.org/simple/hic-straw/hic_straw-1.2.1-cp39-cp39-linux_armv7l.whl#sha256=b274d66f1ff272331ace048c42cf474d408194f2849ba2d6c6dfb86d601faada (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,343 Skipping link: No binaries permitted for hic-straw: https://archive1.piwheels.org/simple/hic-straw/hic_straw-1.2.1-cp311-cp311-linux_armv6l.whl#sha256=a3546918dd047f25475631af9ff26dd18cf25c13661faecb394538083d5533da (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,343 Skipping link: No binaries permitted for hic-straw: https://archive1.piwheels.org/simple/hic-straw/hic_straw-1.2.1-cp311-cp311-linux_armv7l.whl#sha256=a3546918dd047f25475631af9ff26dd18cf25c13661faecb394538083d5533da (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,343 Skipping link: No binaries permitted for hic-straw: https://www.piwheels.org/simple/hic-straw/hic_straw-1.2.1-cp313-cp313-linux_armv6l.whl#sha256=d10012db7d10726043d56a61622b48df4b884c214d3fe8dd9a798ea9240e513c (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,344 Skipping link: No binaries permitted for hic-straw: https://www.piwheels.org/simple/hic-straw/hic_straw-1.2.1-cp313-cp313-linux_armv7l.whl#sha256=d10012db7d10726043d56a61622b48df4b884c214d3fe8dd9a798ea9240e513c (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,344 Skipping link: No binaries permitted for hic-straw: 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https://archive1.piwheels.org/simple/hic-straw/hic_straw-1.0.0.1-cp37-cp37m-linux_armv7l.whl#sha256=dbb1fad14d61d1428f96999f9013aaf4a1dd78ca5259eb429aebaada9ff108c2 (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,351 Skipping link: No binaries permitted for hic-straw: https://www.piwheels.org/simple/hic-straw/hic_straw-1.0.0.1-cp313-cp313-linux_armv6l.whl#sha256=f8638e141e1ae5f4c1317ee36b8b4fc886228cd032e3c6424f1be254fd676879 (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,351 Skipping link: No binaries permitted for hic-straw: https://www.piwheels.org/simple/hic-straw/hic_straw-1.0.0.1-cp313-cp313-linux_armv7l.whl#sha256=f8638e141e1ae5f4c1317ee36b8b4fc886228cd032e3c6424f1be254fd676879 (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,351 Skipping link: No binaries permitted for hic-straw: https://archive1.piwheels.org/simple/hic-straw/hic_straw-1.0.0.0-cp311-cp311-linux_armv6l.whl#sha256=aec9e2c8ab63f6dd5bd212961154f18250c8aa0db1a581bbb6f89d342e7ba777 (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,351 Skipping link: No binaries permitted for hic-straw: https://archive1.piwheels.org/simple/hic-straw/hic_straw-1.0.0.0-cp311-cp311-linux_armv7l.whl#sha256=aec9e2c8ab63f6dd5bd212961154f18250c8aa0db1a581bbb6f89d342e7ba777 (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,351 Skipping link: No binaries permitted for hic-straw: https://archive1.piwheels.org/simple/hic-straw/hic_straw-1.0.0.0-cp35-cp35m-linux_armv6l.whl#sha256=b24cdecc8100c133f9261ac5922e102b9a6a9604610045fbc3b7ab87e592b669 (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,351 Skipping link: No binaries permitted for hic-straw: https://archive1.piwheels.org/simple/hic-straw/hic_straw-1.0.0.0-cp35-cp35m-linux_armv7l.whl#sha256=b24cdecc8100c133f9261ac5922e102b9a6a9604610045fbc3b7ab87e592b669 (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,351 Skipping link: No binaries permitted for hic-straw: https://archive1.piwheels.org/simple/hic-straw/hic_straw-1.0.0.0-cp37-cp37m-linux_armv6l.whl#sha256=cd52040cb7e390fc7ff2e576aced504ee8675b5936b490e479327fab793a39ce (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,352 Skipping link: No binaries permitted for hic-straw: https://archive1.piwheels.org/simple/hic-straw/hic_straw-1.0.0.0-cp37-cp37m-linux_armv7l.whl#sha256=cd52040cb7e390fc7ff2e576aced504ee8675b5936b490e479327fab793a39ce (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,352 Skipping link: No binaries permitted for hic-straw: https://archive1.piwheels.org/simple/hic-straw/hic_straw-1.0.0.0-cp39-cp39-linux_armv6l.whl#sha256=63b9a8b712b0ad252026eb358d561833eba65c4c0977a99570646a02ed9351be (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,352 Skipping link: No binaries permitted for hic-straw: https://archive1.piwheels.org/simple/hic-straw/hic_straw-1.0.0.0-cp39-cp39-linux_armv7l.whl#sha256=63b9a8b712b0ad252026eb358d561833eba65c4c0977a99570646a02ed9351be (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,352 Skipping link: No binaries permitted for hic-straw: https://www.piwheels.org/simple/hic-straw/hic_straw-1.0.0.0-cp313-cp313-linux_armv6l.whl#sha256=66dd8885aba618c79128089c515c37fb34921b96c0322ca1ba49549956a80d12 (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,352 Skipping link: No binaries permitted for hic-straw: https://www.piwheels.org/simple/hic-straw/hic_straw-1.0.0.0-cp313-cp313-linux_armv7l.whl#sha256=66dd8885aba618c79128089c515c37fb34921b96c0322ca1ba49549956a80d12 (from https://www.piwheels.org/simple/hic-straw/) (requires-python:>3.3) 2025-10-15T18:55:48,352 Skipping link: No binaries permitted for hic-straw: https://archive1.piwheels.org/simple/hic-straw/hic_straw-0.0.6-py3-none-any.whl#sha256=fd355fddfb43bb7a152125200a96a959bbe2fa3e4f5e1d41d0af8f27ebecf69e (from https://www.piwheels.org/simple/hic-straw/) 2025-10-15T18:55:48,352 Skipping link: not a file: https://www.piwheels.org/simple/hic-straw/ 2025-10-15T18:55:48,353 Skipping link: not a file: https://pypi.org/simple/hic-straw/ 2025-10-15T18:55:48,376 Given no hashes to check 1 links for project 'hic-straw': discarding no candidates 2025-10-15T18:55:48,377 Collecting hic-straw==1.2.0 2025-10-15T18:55:48,378 Created temporary directory: /tmp/pip-unpack-n9elzzlc 2025-10-15T18:55:48,514 Downloading hic-straw-1.2.0.tar.gz (17 kB) 2025-10-15T18:55:48,541 Added hic-straw==1.2.0 from https://files.pythonhosted.org/packages/90/c0/c8eb0d0ff42bc42a3d0858773bfe498eee073c873035440150c78b291b02/hic-straw-1.2.0.tar.gz to build tracker '/tmp/pip-build-tracker-fkfwvozb' 2025-10-15T18:55:48,543 Running setup.py (path:/tmp/pip-wheel-217_er99/hic-straw_15ac6e0226884a14b942e553e46a4ccf/setup.py) egg_info for package hic-straw 2025-10-15T18:55:48,544 Created temporary directory: /tmp/pip-pip-egg-info-hqglzeud 2025-10-15T18:55:48,544 Preparing metadata (setup.py): started 2025-10-15T18:55:48,545 Running command python setup.py egg_info 2025-10-15T18:55:49,449 /usr/local/lib/python3.13/dist-packages/setuptools/__init__.py:92: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2025-10-15T18:55:49,450 !! 2025-10-15T18:55:49,450 ******************************************************************************** 2025-10-15T18:55:49,450 Requirements should be satisfied by a PEP 517 installer. 2025-10-15T18:55:49,450 If you are using pip, you can try `pip install --use-pep517`. 2025-10-15T18:55:49,450 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-10-15T18:55:49,450 or your builds will no longer be supported. 2025-10-15T18:55:49,451 ******************************************************************************** 2025-10-15T18:55:49,451 !! 2025-10-15T18:55:49,451 dist.fetch_build_eggs(dist.setup_requires) 2025-10-15T18:55:52,420 running egg_info 2025-10-15T18:55:52,496 creating /tmp/pip-pip-egg-info-hqglzeud/hic_straw.egg-info 2025-10-15T18:55:52,496 writing /tmp/pip-pip-egg-info-hqglzeud/hic_straw.egg-info/PKG-INFO 2025-10-15T18:55:52,497 writing dependency_links to /tmp/pip-pip-egg-info-hqglzeud/hic_straw.egg-info/dependency_links.txt 2025-10-15T18:55:52,498 writing requirements to /tmp/pip-pip-egg-info-hqglzeud/hic_straw.egg-info/requires.txt 2025-10-15T18:55:52,498 writing top-level names to /tmp/pip-pip-egg-info-hqglzeud/hic_straw.egg-info/top_level.txt 2025-10-15T18:55:52,498 writing manifest file '/tmp/pip-pip-egg-info-hqglzeud/hic_straw.egg-info/SOURCES.txt' 2025-10-15T18:55:52,646 reading manifest file '/tmp/pip-pip-egg-info-hqglzeud/hic_straw.egg-info/SOURCES.txt' 2025-10-15T18:55:52,647 reading manifest template 'MANIFEST.in' 2025-10-15T18:55:52,651 writing manifest file '/tmp/pip-pip-egg-info-hqglzeud/hic_straw.egg-info/SOURCES.txt' 2025-10-15T18:55:52,759 Preparing metadata (setup.py): finished with status 'done' 2025-10-15T18:55:52,764 Source in /tmp/pip-wheel-217_er99/hic-straw_15ac6e0226884a14b942e553e46a4ccf has version 1.2.0, which satisfies requirement hic-straw==1.2.0 from https://files.pythonhosted.org/packages/90/c0/c8eb0d0ff42bc42a3d0858773bfe498eee073c873035440150c78b291b02/hic-straw-1.2.0.tar.gz 2025-10-15T18:55:52,764 Removed hic-straw==1.2.0 from https://files.pythonhosted.org/packages/90/c0/c8eb0d0ff42bc42a3d0858773bfe498eee073c873035440150c78b291b02/hic-straw-1.2.0.tar.gz from build tracker '/tmp/pip-build-tracker-fkfwvozb' 2025-10-15T18:55:52,769 Created temporary directory: /tmp/pip-unpack-gx6oyj8l 2025-10-15T18:55:52,769 Created temporary directory: /tmp/pip-unpack-1dlgjqid 2025-10-15T18:55:52,769 Building wheels for collected packages: hic-straw 2025-10-15T18:55:52,771 Created temporary directory: /tmp/pip-wheel-64zho1v8 2025-10-15T18:55:52,771 DEPRECATION: Building 'hic-straw' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'hic-straw'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-10-15T18:55:52,772 Building wheel for hic-straw (setup.py): started 2025-10-15T18:55:52,773 Destination directory: /tmp/pip-wheel-64zho1v8 2025-10-15T18:55:52,773 Running command python setup.py bdist_wheel 2025-10-15T18:55:53,591 /usr/local/lib/python3.13/dist-packages/setuptools/__init__.py:92: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2025-10-15T18:55:53,592 !! 2025-10-15T18:55:53,592 ******************************************************************************** 2025-10-15T18:55:53,592 Requirements should be satisfied by a PEP 517 installer. 2025-10-15T18:55:53,592 If you are using pip, you can try `pip install --use-pep517`. 2025-10-15T18:55:53,592 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-10-15T18:55:53,592 or your builds will no longer be supported. 2025-10-15T18:55:53,592 ******************************************************************************** 2025-10-15T18:55:53,593 !! 2025-10-15T18:55:53,593 dist.fetch_build_eggs(dist.setup_requires) 2025-10-15T18:55:54,249 running bdist_wheel 2025-10-15T18:55:54,552 running build 2025-10-15T18:55:54,552 running build_ext 2025-10-15T18:55:54,560 creating tmp 2025-10-15T18:55:54,560 arm-linux-gnueabihf-g++ -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -I/usr/include/python3.13 -c /tmp/tmpxtymz6c5.cpp -o tmp/tmpxtymz6c5.o -std=c++14 2025-10-15T18:55:54,623 arm-linux-gnueabihf-g++ -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -I/usr/include/python3.13 -c /tmp/tmp75vde8yi.cpp -o tmp/tmp75vde8yi.o -fvisibility=hidden 2025-10-15T18:55:55,028 building 'hicstraw' extension 2025-10-15T18:55:55,033 creating build/temp.linux-armv7l-cpython-313/src 2025-10-15T18:55:55,033 arm-linux-gnueabihf-g++ -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -I/tmp/pip-wheel-217_er99/hic-straw_15ac6e0226884a14b942e553e46a4ccf/.eggs/pybind11-3.0.1-py3.13.egg/pybind11/include -I/tmp/pip-wheel-217_er99/hic-straw_15ac6e0226884a14b942e553e46a4ccf/.eggs/pybind11-3.0.1-py3.13.egg/pybind11/include -I/usr/include/python3.13 -c src/straw.cpp -o build/temp.linux-armv7l-cpython-313/src/straw.o -DVERSION_INFO=\"1.2.0\" -std=c++14 -fvisibility=hidden 2025-10-15T18:56:00,890 src/straw.cpp: In function ‘bool readFooter(std::istream&, int64_t, int32_t, int32_t, int32_t, const std::string&, const std::string&, const std::string&, int32_t, int64_t&, indexEntry&, indexEntry&, std::vector&)’: 2025-10-15T18:56:00,890 src/straw.cpp:388:17: warning: unused variable ‘nBytes’ [-Wunused-variable] 2025-10-15T18:56:00,890 388 | int64_t nBytes = readInt64FromFile(fin); 2025-10-15T18:56:00,890 | ^~~~~~ 2025-10-15T18:56:00,890 src/straw.cpp:390:17: warning: unused variable ‘nBytes’ [-Wunused-variable] 2025-10-15T18:56:00,890 390 | int32_t nBytes = readInt32FromFile(fin); 2025-10-15T18:56:00,890 | ^~~~~~ 2025-10-15T18:56:00,893 src/straw.cpp:403:17: warning: unused variable ‘sizeinbytes’ [-Wunused-variable] 2025-10-15T18:56:00,893 403 | int32_t sizeinbytes = readInt32FromFile(fin); 2025-10-15T18:56:00,893 | ^~~~~~~~~~~ 2025-10-15T18:56:00,947 src/straw.cpp: In function ‘std::map readMatrixHttp(CURL*, int64_t, const std::string&, int32_t, float&, int32_t&, int32_t&)’: 2025-10-15T18:56:00,947 src/straw.cpp:606:13: warning: unused variable ‘c1’ [-Wunused-variable] 2025-10-15T18:56:00,947 606 | int32_t c1 = readInt32FromFile(bufin); 2025-10-15T18:56:00,947 | ^~ 2025-10-15T18:56:00,947 src/straw.cpp:607:13: warning: unused variable ‘c2’ [-Wunused-variable] 2025-10-15T18:56:00,947 607 | int32_t c2 = readInt32FromFile(bufin); 2025-10-15T18:56:00,947 | ^~ 2025-10-15T18:56:00,949 src/straw.cpp: In function ‘std::map readMatrix(std::istream&, int64_t, const std::string&, int32_t, float&, int32_t&, int32_t&)’: 2025-10-15T18:56:00,949 src/straw.cpp:634:13: warning: unused variable ‘c1’ [-Wunused-variable] 2025-10-15T18:56:00,949 634 | int32_t c1 = readInt32FromFile(fin); 2025-10-15T18:56:00,949 | ^~ 2025-10-15T18:56:00,949 src/straw.cpp:635:13: warning: unused variable ‘c2’ [-Wunused-variable] 2025-10-15T18:56:00,950 635 | int32_t c2 = readInt32FromFile(fin); 2025-10-15T18:56:00,950 | ^~ 2025-10-15T18:56:01,081 src/straw.cpp: In function ‘int64_t getNumRecordsForFile(const std::string&, int32_t, bool)’: 2025-10-15T18:56:01,081 src/straw.cpp:1328:26: warning: comparison of integer expressions of different signedness: ‘int32_t’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2025-10-15T18:56:01,081 1328 | for(int32_t i = 0; i < chromosomes.size(); i++){ 2025-10-15T18:56:01,081 | ~~^~~~~~~~~~~~~~~~~~~~ 2025-10-15T18:56:01,082 src/straw.cpp:1330:44: warning: comparison of integer expressions of different signedness: ‘int32_t’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2025-10-15T18:56:01,082 1330 | for(int32_t j = i + indexOffset; j < chromosomes.size(); j++){ 2025-10-15T18:56:01,082 | ~~^~~~~~~~~~~~~~~~~~~~ 2025-10-15T18:56:14,637 In file included from /usr/include/c++/14/bits/stl_algo.h:61, 2025-10-15T18:56:14,637 from /usr/include/c++/14/algorithm:61, 2025-10-15T18:56:14,638 from src/straw.cpp:36: 2025-10-15T18:56:14,638 /usr/include/c++/14/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2025-10-15T18:56:14,638 /usr/include/c++/14/bits/stl_heap.h:224:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2025-10-15T18:56:14,638 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, 2025-10-15T18:56:14,638 | ^~~~~~~~~~~~~ 2025-10-15T18:56:14,797 In file included from /usr/include/c++/14/map:62, 2025-10-15T18:56:14,797 from src/straw.cpp:28: 2025-10-15T18:56:14,797 /usr/include/c++/14/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = int; _Val = std::pair; _KeyOfValue = std::_Select1st >; _Compare = std::less; _Alloc = std::allocator >]’: 2025-10-15T18:56:14,797 /usr/include/c++/14/bits/stl_tree.h:2456:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2025-10-15T18:56:14,797 2456 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: 2025-10-15T18:56:14,797 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-10-15T18:56:16,417 /usr/include/c++/14/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, chromosome>; _KeyOfValue = std::_Select1st, chromosome> >; _Compare = std::less >; _Alloc = std::allocator, chromosome> >]’: 2025-10-15T18:56:16,417 /usr/include/c++/14/bits/stl_tree.h:2456:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, chromosome>, std::_Select1st, chromosome> >, std::less >, std::allocator, chromosome> > >::const_iterator’ changed in GCC 7.1 2025-10-15T18:56:17,661 In file included from /usr/include/c++/14/map:63: 2025-10-15T18:56:17,661 In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = chromosome; _Compare = std::less >; _Alloc = std::allocator, chromosome> >]’, 2025-10-15T18:56:17,661 inlined from ‘std::map, chromosome> readHeader(std::istream&, int64_t&, std::string&, int32_t&, int32_t&, int64_t&, int64_t&)’ at src/straw.cpp:259:27: 2025-10-15T18:56:17,661 /usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, chromosome>, std::_Select1st, chromosome> >, std::less >, std::allocator, chromosome> > >::const_iterator’ changed in GCC 7.1 2025-10-15T18:56:17,661 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2025-10-15T18:56:17,661 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-10-15T18:56:17,661 514 | std::tuple(__k), 2025-10-15T18:56:17,662 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-10-15T18:56:17,662 515 | std::tuple<>()); 2025-10-15T18:56:17,662 | ~~~~~~~~~~~~~~~ 2025-10-15T18:56:18,001 In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = int; _Tp = indexEntry; _Compare = std::less; _Alloc = std::allocator >]’, 2025-10-15T18:56:18,001 inlined from ‘void populateBlockMap(std::istream&, int32_t, std::map&)’ at src/straw.cpp:543:29: 2025-10-15T18:56:18,002 /usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2025-10-15T18:56:18,002 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2025-10-15T18:56:18,002 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-10-15T18:56:18,002 514 | std::tuple(__k), 2025-10-15T18:56:18,002 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-10-15T18:56:18,002 515 | std::tuple<>()); 2025-10-15T18:56:18,002 | ~~~~~~~~~~~~~~~ 2025-10-15T18:56:19,326 In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = chromosome; _Compare = std::less >; _Alloc = std::allocator, chromosome> >]’, 2025-10-15T18:56:19,327 inlined from ‘void parsePositions(const std::string&, std::string&, int64_t&, int64_t&, std::map, chromosome>)’ at src/straw.cpp:1289:25: 2025-10-15T18:56:19,327 /usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, chromosome>, std::_Select1st, chromosome> >, std::less >, std::allocator, chromosome> > >::const_iterator’ changed in GCC 7.1 2025-10-15T18:56:19,327 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2025-10-15T18:56:19,327 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-10-15T18:56:19,327 514 | std::tuple(__k), 2025-10-15T18:56:19,327 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-10-15T18:56:19,327 515 | std::tuple<>()); 2025-10-15T18:56:19,327 | ~~~~~~~~~~~~~~~ 2025-10-15T18:56:19,975 In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = int; _Tp = indexEntry; _Compare = std::less; _Alloc = std::allocator >]’, 2025-10-15T18:56:19,975 inlined from ‘std::vector MatrixZoomData::getRecords(int64_t, int64_t, int64_t, int64_t)’ at src/straw.cpp:1064:89: 2025-10-15T18:56:19,975 /usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2025-10-15T18:56:19,975 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2025-10-15T18:56:19,975 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-10-15T18:56:19,976 514 | std::tuple(__k), 2025-10-15T18:56:19,976 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-10-15T18:56:19,976 515 | std::tuple<>()); 2025-10-15T18:56:19,976 | ~~~~~~~~~~~~~~~ 2025-10-15T18:56:22,593 In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = chromosome; _Compare = std::less >; _Alloc = std::allocator, chromosome> >]’, 2025-10-15T18:56:22,593 inlined from ‘MatrixZoomData* HiCFile::getMatrixZoomData(const std::string&, const std::string&, const std::string&, const std::string&, const std::string&, int32_t)’ at src/straw.cpp:1266:47: 2025-10-15T18:56:22,593 /usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, chromosome>, std::_Select1st, chromosome> >, std::less >, std::allocator, chromosome> > >::const_iterator’ changed in GCC 7.1 2025-10-15T18:56:22,593 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2025-10-15T18:56:22,593 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-10-15T18:56:22,594 514 | std::tuple(__k), 2025-10-15T18:56:22,594 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-10-15T18:56:22,594 515 | std::tuple<>()); 2025-10-15T18:56:22,594 | ~~~~~~~~~~~~~~~ 2025-10-15T18:56:22,594 In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = chromosome; _Compare = std::less >; _Alloc = std::allocator, chromosome> >]’, 2025-10-15T18:56:22,594 inlined from ‘MatrixZoomData* HiCFile::getMatrixZoomData(const std::string&, const std::string&, const std::string&, const std::string&, const std::string&, int32_t)’ at src/straw.cpp:1267:47: 2025-10-15T18:56:22,594 /usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, chromosome>, std::_Select1st, chromosome> >, std::less >, std::allocator, chromosome> > >::const_iterator’ changed in GCC 7.1 2025-10-15T18:56:22,594 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2025-10-15T18:56:22,595 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-10-15T18:56:22,595 514 | std::tuple(__k), 2025-10-15T18:56:22,595 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-10-15T18:56:22,595 515 | std::tuple<>()); 2025-10-15T18:56:22,595 | ~~~~~~~~~~~~~~~ 2025-10-15T18:56:22,755 In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = chromosome; _Compare = std::less >; _Alloc = std::allocator, chromosome> >]’, 2025-10-15T18:56:22,755 inlined from ‘std::vector straw(const std::string&, const std::string&, const std::string&, const std::string&, const std::string&, const std::string&, int32_t)’ at src/straw.cpp:1309:36: 2025-10-15T18:56:22,755 /usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, chromosome>, std::_Select1st, chromosome> >, std::less >, std::allocator, chromosome> > >::const_iterator’ changed in GCC 7.1 2025-10-15T18:56:22,756 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2025-10-15T18:56:22,756 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-10-15T18:56:22,756 514 | std::tuple(__k), 2025-10-15T18:56:22,756 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-10-15T18:56:22,756 515 | std::tuple<>()); 2025-10-15T18:56:22,756 | ~~~~~~~~~~~~~~~ 2025-10-15T18:56:22,756 In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::__cxx11::basic_string; _Tp = chromosome; _Compare = std::less >; _Alloc = std::allocator, chromosome> >]’, 2025-10-15T18:56:22,756 inlined from ‘std::vector straw(const std::string&, const std::string&, const std::string&, const std::string&, const std::string&, const std::string&, int32_t)’ at src/straw.cpp:1309:73: 2025-10-15T18:56:22,756 /usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, chromosome>, std::_Select1st, chromosome> >, std::less >, std::allocator, chromosome> > >::const_iterator’ changed in GCC 7.1 2025-10-15T18:56:22,757 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2025-10-15T18:56:22,757 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-10-15T18:56:22,757 514 | std::tuple(__k), 2025-10-15T18:56:22,757 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-10-15T18:56:22,757 515 | std::tuple<>()); 2025-10-15T18:56:22,757 | ~~~~~~~~~~~~~~~ 2025-10-15T18:56:34,840 In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = int; _Tp = indexEntry; _Compare = std::less; _Alloc = std::allocator >]’, 2025-10-15T18:56:34,840 inlined from ‘int64_t MatrixZoomData::getNumberOfTotalRecords()’ at src/straw.cpp:1170:73, 2025-10-15T18:56:34,840 inlined from ‘int64_t getNumRecordsForFile(const std::string&, int32_t, bool)’ at src/straw.cpp:1338:60: 2025-10-15T18:56:34,840 /usr/include/c++/14/bits/stl_map.h:513:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2025-10-15T18:56:34,840 513 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2025-10-15T18:56:34,840 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-10-15T18:56:34,841 514 | std::tuple(__k), 2025-10-15T18:56:34,841 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-10-15T18:56:34,841 515 | std::tuple<>()); 2025-10-15T18:56:34,841 | ~~~~~~~~~~~~~~~ 2025-10-15T18:56:47,294 creating build/lib.linux-armv7l-cpython-313 2025-10-15T18:56:47,294 arm-linux-gnueabihf-g++ -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-313/src/straw.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-313/hicstraw.cpython-313-arm-linux-gnueabihf.so -lcurl -lz 2025-10-15T18:56:47,855 /usr/local/lib/python3.13/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2025-10-15T18:56:47,855 !! 2025-10-15T18:56:47,856 ******************************************************************************** 2025-10-15T18:56:47,856 Please avoid running ``setup.py`` directly. 2025-10-15T18:56:47,856 Instead, use pypa/build, pypa/installer or other 2025-10-15T18:56:47,856 standards-based tools. 2025-10-15T18:56:47,856 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-10-15T18:56:47,856 or your builds will no longer be supported. 2025-10-15T18:56:47,856 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2025-10-15T18:56:47,856 ******************************************************************************** 2025-10-15T18:56:47,857 !! 2025-10-15T18:56:47,857 self.initialize_options() 2025-10-15T18:56:47,931 installing to build/bdist.linux-armv7l/wheel 2025-10-15T18:56:47,931 running install 2025-10-15T18:56:47,953 running install_lib 2025-10-15T18:56:48,029 creating build/bdist.linux-armv7l/wheel 2025-10-15T18:56:48,029 copying build/lib.linux-armv7l-cpython-313/hicstraw.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/. 2025-10-15T18:56:48,048 running install_egg_info 2025-10-15T18:56:48,126 running egg_info 2025-10-15T18:56:48,201 writing hic_straw.egg-info/PKG-INFO 2025-10-15T18:56:48,202 writing dependency_links to hic_straw.egg-info/dependency_links.txt 2025-10-15T18:56:48,203 writing requirements to hic_straw.egg-info/requires.txt 2025-10-15T18:56:48,203 writing top-level names to hic_straw.egg-info/top_level.txt 2025-10-15T18:56:48,280 reading manifest file 'hic_straw.egg-info/SOURCES.txt' 2025-10-15T18:56:48,281 reading manifest template 'MANIFEST.in' 2025-10-15T18:56:48,285 writing manifest file 'hic_straw.egg-info/SOURCES.txt' 2025-10-15T18:56:48,285 Copying hic_straw.egg-info to build/bdist.linux-armv7l/wheel/./hic_straw-1.2.0-py3.13.egg-info 2025-10-15T18:56:48,287 running install_scripts 2025-10-15T18:56:48,341 creating build/bdist.linux-armv7l/wheel/hic_straw-1.2.0.dist-info/WHEEL 2025-10-15T18:56:48,342 creating '/tmp/pip-wheel-64zho1v8/hic_straw-1.2.0-cp313-cp313-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-10-15T18:56:49,132 adding 'hicstraw.cpython-313-arm-linux-gnueabihf.so' 2025-10-15T18:56:49,165 adding 'hic_straw-1.2.0.dist-info/METADATA' 2025-10-15T18:56:49,166 adding 'hic_straw-1.2.0.dist-info/WHEEL' 2025-10-15T18:56:49,166 adding 'hic_straw-1.2.0.dist-info/top_level.txt' 2025-10-15T18:56:49,167 adding 'hic_straw-1.2.0.dist-info/RECORD' 2025-10-15T18:56:49,167 removing build/bdist.linux-armv7l/wheel 2025-10-15T18:56:49,319 Building wheel for hic-straw (setup.py): finished with status 'done' 2025-10-15T18:56:49,338 Created wheel for hic-straw: filename=hic_straw-1.2.0-cp313-cp313-linux_armv7l.whl size=1736752 sha256=88021c0d6b88c977791906b308a1e223d02be75f2bac6300fdb309d2d4b718c5 2025-10-15T18:56:49,339 Stored in directory: /tmp/pip-ephem-wheel-cache-ukz5a2qp/wheels/2d/90/c4/effb951437b90ca7e97972f7665c629771ffa670ed3fca4740 2025-10-15T18:56:49,347 Successfully built hic-straw 2025-10-15T18:56:49,352 Removed build tracker: '/tmp/pip-build-tracker-fkfwvozb'