2025-10-16T13:02:33,611 Created temporary directory: /tmp/pip-ephem-wheel-cache-773cqoy6 2025-10-16T13:02:33,613 Created temporary directory: /tmp/pip-build-tracker-cks2i8c1 2025-10-16T13:02:33,614 Initialized build tracking at /tmp/pip-build-tracker-cks2i8c1 2025-10-16T13:02:33,615 Created build tracker: /tmp/pip-build-tracker-cks2i8c1 2025-10-16T13:02:33,615 Entered build tracker: /tmp/pip-build-tracker-cks2i8c1 2025-10-16T13:02:33,616 Created temporary directory: /tmp/pip-wheel-onbxuuvf 2025-10-16T13:02:33,619 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2025-10-16T13:02:33,621 Created temporary directory: /tmp/pip-ephem-wheel-cache-hpxes4hg 2025-10-16T13:02:33,643 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-10-16T13:02:33,647 2 location(s) to search for versions of haproh: 2025-10-16T13:02:33,647 * https://pypi.org/simple/haproh/ 2025-10-16T13:02:33,647 * https://www.piwheels.org/simple/haproh/ 2025-10-16T13:02:33,648 Fetching project page and analyzing links: https://pypi.org/simple/haproh/ 2025-10-16T13:02:33,648 Getting page https://pypi.org/simple/haproh/ 2025-10-16T13:02:33,650 Found index url https://pypi.org/simple 2025-10-16T13:02:33,791 Fetched page https://pypi.org/simple/haproh/ as application/vnd.pypi.simple.v1+json 2025-10-16T13:02:33,797 Found link https://files.pythonhosted.org/packages/bd/c5/214967ada45e9b2ade103fc0fed946d8682e9afff4edbf1c8226313ff461/hapROH-0.1a1.tar.gz (from https://pypi.org/simple/haproh/) (requires-python:>=3.6), version: 0.1a1 2025-10-16T13:02:33,798 Found link https://files.pythonhosted.org/packages/09/d6/d9828b810f6d71a5f7342beadf27ec18a307914cfa4c9e7ae852fae56274/hapROH-0.1a2.tar.gz (from https://pypi.org/simple/haproh/) (requires-python:>=3.6), version: 0.1a2 2025-10-16T13:02:33,799 Found link https://files.pythonhosted.org/packages/e1/b0/ea840a3150f62a2b1ad51e73764dffe16304407165a776140090da9a5fc6/hapROH-0.1a3.tar.gz (from https://pypi.org/simple/haproh/) (requires-python:>=3.6), version: 0.1a3 2025-10-16T13:02:33,800 Found link https://files.pythonhosted.org/packages/af/50/c4a6e1231df941e75cd1f5e4493c256b441f2c347fe6de5b3da6c911cdf8/hapROH-0.1a4.tar.gz (from https://pypi.org/simple/haproh/) (requires-python:>=3.6), version: 0.1a4 2025-10-16T13:02:33,801 Found link https://files.pythonhosted.org/packages/c0/d7/4e7090b9c596dd361b9c5d6ab8452c7a4f72e5c97dd032c703bde26b70ef/hapROH-0.1a5.tar.gz (from https://pypi.org/simple/haproh/) (requires-python:>=3.6), version: 0.1a5 2025-10-16T13:02:33,802 Found link https://files.pythonhosted.org/packages/40/d3/d7d6adfc828e8175c4d6c84aff787b3a3a88815e7273364d69253db73166/hapROH-0.1a6.tar.gz (from https://pypi.org/simple/haproh/) (requires-python:>=3.6), version: 0.1a6 2025-10-16T13:02:33,803 Found link https://files.pythonhosted.org/packages/ea/5e/dfe5fa70d8e332db5356df67ef8d15e8b104c1ca5e2068f1256a7baa9b57/hapROH-0.1a7.tar.gz (from https://pypi.org/simple/haproh/) (requires-python:>=3.6), version: 0.1a7 2025-10-16T13:02:33,804 Found link https://files.pythonhosted.org/packages/a2/15/677af29c21d2fd26fff565cab7e80fd986e6a56488a06b1b4740b6aca477/hapROH-0.1a8.tar.gz (from https://pypi.org/simple/haproh/) (requires-python:>=3.6), version: 0.1a8 2025-10-16T13:02:33,805 Found link https://files.pythonhosted.org/packages/5a/a9/463ef69c5bb3082dc1eb8df6ab52b9e7d4fa3b9fcf5f09e4ba714d8ba214/hapROH-0.1a9.tar.gz (from https://pypi.org/simple/haproh/) (requires-python:>=3.6), version: 0.1a9 2025-10-16T13:02:33,806 Found link https://files.pythonhosted.org/packages/92/2b/dcbe6a855ea8d9f2034964b47ebf42dbef6c248fb625a45d0be01c9a5ac4/hapROH-0.2a1.tar.gz (from https://pypi.org/simple/haproh/) (requires-python:>=3.6), version: 0.2a1 2025-10-16T13:02:33,807 Found link https://files.pythonhosted.org/packages/ba/84/59890807199c1b999c29085ca7ec7edb6921a6af577ec6e9ce03092582d3/hapROH-0.2a2.tar.gz (from https://pypi.org/simple/haproh/) (requires-python:>=3.6), version: 0.2a2 2025-10-16T13:02:33,808 Found link https://files.pythonhosted.org/packages/6f/64/7d7245ad201827094b3f1eda62aff23563d7134a6ecb136e4a58917ddd31/hapROH-0.2a3.tar.gz (from https://pypi.org/simple/haproh/) (requires-python:>=3.6), version: 0.2a3 2025-10-16T13:02:33,809 Found link https://files.pythonhosted.org/packages/ca/fb/1520702830758a2d656b4ac29fb90b4821bf029cc1fe78fb60d416867d3f/hapROH-0.3a1.tar.gz (from https://pypi.org/simple/haproh/) (requires-python:>=3.6), version: 0.3a1 2025-10-16T13:02:33,810 Found link https://files.pythonhosted.org/packages/f4/2f/c00bebd5248a9d73d0bf1f661de044a78a6a176f25b91957622acbf62192/hapROH-0.3a2.tar.gz (from https://pypi.org/simple/haproh/) (requires-python:>=3.6), version: 0.3a2 2025-10-16T13:02:33,810 Found link https://files.pythonhosted.org/packages/57/4c/56ad6f3c343ab9311c1187694766880a66365ceddeab622f9ab997358748/hapROH-0.3a3.tar.gz (from https://pypi.org/simple/haproh/) (requires-python:>=3.6), version: 0.3a3 2025-10-16T13:02:33,811 Found link https://files.pythonhosted.org/packages/82/2a/0cd99e4496b9d8a3e9e4f60ff7a2949f2beb2a382d87db5d9c1f32ff3de0/hapROH-0.3a4.tar.gz (from https://pypi.org/simple/haproh/) (requires-python:>=3.6), version: 0.3a4 2025-10-16T13:02:33,812 Found link https://files.pythonhosted.org/packages/d6/b9/0b14965fca49d13f1beab95cbd2a504f163df06a5ff95b604aca9d7630f1/hapROH-0.4a1.tar.gz (from https://pypi.org/simple/haproh/) (requires-python:>=3.6), version: 0.4a1 2025-10-16T13:02:33,813 Found link https://files.pythonhosted.org/packages/85/b6/4d7dd0f6d9c3bcf9c57d40f07be0e89ca7fe660fc01f94f98d60325989f6/hapROH-0.5a0.tar.gz (from https://pypi.org/simple/haproh/) (requires-python:>=3.6), version: 0.5a0 2025-10-16T13:02:33,814 Found link https://files.pythonhosted.org/packages/2b/da/42ea484ad731b2023810f5ed8b116f18db17d6b2718f9bfd3112a2463d77/hapROH-0.51a0.tar.gz (from https://pypi.org/simple/haproh/) (requires-python:>=3.6), version: 0.51a0 2025-10-16T13:02:33,815 Found link https://files.pythonhosted.org/packages/91/54/bbbb642068f250c5781741d2a2a2a29e0206bd146f1e43f7d4f166ae573c/hapROH-0.52.tar.gz (from https://pypi.org/simple/haproh/) (requires-python:>=3.6), version: 0.52 2025-10-16T13:02:33,816 Found link https://files.pythonhosted.org/packages/00/9d/851bd56ea0a900d379fff334556b411a01af7ab2e7bd1e83f6d8a9514602/hapROH-0.53.tar.gz (from https://pypi.org/simple/haproh/) (requires-python:>=3.6), version: 0.53 2025-10-16T13:02:33,817 Found link https://files.pythonhosted.org/packages/a5/cf/5f5f6198a33eb144b6e1a2117dedebae39df5640839443ba9dce90581d00/hapROH-0.60.tar.gz (from https://pypi.org/simple/haproh/) (requires-python:>=3.6), version: 0.60 2025-10-16T13:02:33,818 Found link https://files.pythonhosted.org/packages/fd/69/a2509deeaa4ea550d2b299dbecd574950d69a78e1de5d82082df0591f482/hapROH-0.61.tar.gz (from https://pypi.org/simple/haproh/) (requires-python:>=3.6), version: 0.61 2025-10-16T13:02:33,819 Found link https://files.pythonhosted.org/packages/db/d9/fd9175ed465af37a1d5a0207f0c52d60cea7889dff7a8be8fc3a644eab34/hapROH-0.62.tar.gz (from https://pypi.org/simple/haproh/) (requires-python:>=3.6), version: 0.62 2025-10-16T13:02:33,819 Found link https://files.pythonhosted.org/packages/30/bd/4c4fae117c765b3166ebcd7a67e9610c722c7720313579a3eaa3b029431f/hapROH-0.63.tar.gz (from https://pypi.org/simple/haproh/) (requires-python:>=3.6), version: 0.63 2025-10-16T13:02:33,820 Found link https://files.pythonhosted.org/packages/55/5a/fbce71c4dc0979387783721cac3f30418e88570c19036f0947e2df25b080/hapROH-0.64.tar.gz (from https://pypi.org/simple/haproh/) (requires-python:>=3.6), version: 0.64 2025-10-16T13:02:33,821 Found link https://files.pythonhosted.org/packages/41/4f/1364f97fcd9279b74a042dbf4ae7f8a7ebcc4642b852a2db4caf1c70ed9b/haproh-0.66.tar.gz (from https://pypi.org/simple/haproh/) (requires-python:>=3.6), version: 0.66 2025-10-16T13:02:33,822 Found link https://files.pythonhosted.org/packages/7c/ce/65a32bcd51a2f7fcf69e0ef5c709d5a726d2e18380aeff5b20925c8d78d5/haproh-0.70.tar.gz (from https://pypi.org/simple/haproh/) (requires-python:>=3.6), version: 0.70 2025-10-16T13:02:33,823 Fetching project page and analyzing links: https://www.piwheels.org/simple/haproh/ 2025-10-16T13:02:33,824 Getting page https://www.piwheels.org/simple/haproh/ 2025-10-16T13:02:33,825 Found index url https://www.piwheels.org/simple 2025-10-16T13:02:33,987 Fetched page https://www.piwheels.org/simple/haproh/ as text/html 2025-10-16T13:02:34,042 Skipping link: No binaries permitted for haproh: https://www.piwheels.org/simple/haproh/haproh-0.66-cp311-cp311-linux_armv6l.whl#sha256=76cd049675c109d977d06ab576952da8e63c90c895fe9b60564ae5b4314c8b7f (from https://www.piwheels.org/simple/haproh/) (requires-python:>=3.6) 2025-10-16T13:02:34,043 Skipping link: No binaries permitted for haproh: https://www.piwheels.org/simple/haproh/haproh-0.66-cp311-cp311-linux_armv7l.whl#sha256=76cd049675c109d977d06ab576952da8e63c90c895fe9b60564ae5b4314c8b7f (from https://www.piwheels.org/simple/haproh/) (requires-python:>=3.6) 2025-10-16T13:02:34,043 Skipping link: No binaries permitted for haproh: https://www.piwheels.org/simple/haproh/haproh-0.66-cp313-cp313-linux_armv6l.whl#sha256=f4ba5e45bb737244ed09bd26d61d750007e158edd71f53005a0ce9b288f76994 (from https://www.piwheels.org/simple/haproh/) (requires-python:>=3.6) 2025-10-16T13:02:34,044 Skipping link: No binaries permitted for haproh: https://www.piwheels.org/simple/haproh/haproh-0.66-cp313-cp313-linux_armv7l.whl#sha256=f4ba5e45bb737244ed09bd26d61d750007e158edd71f53005a0ce9b288f76994 (from https://www.piwheels.org/simple/haproh/) (requires-python:>=3.6) 2025-10-16T13:02:34,044 Skipping link: No binaries permitted for haproh: https://www.piwheels.org/simple/haproh/haproh-0.66-cp39-cp39-linux_armv6l.whl#sha256=b4de468176038d762d8fa2fe03ad30c87cd34426f5278c1a7e89b68495d962b4 (from https://www.piwheels.org/simple/haproh/) (requires-python:>=3.6) 2025-10-16T13:02:34,045 Skipping link: No binaries permitted for haproh: https://www.piwheels.org/simple/haproh/haproh-0.66-cp39-cp39-linux_armv7l.whl#sha256=b4de468176038d762d8fa2fe03ad30c87cd34426f5278c1a7e89b68495d962b4 (from https://www.piwheels.org/simple/haproh/) (requires-python:>=3.6) 2025-10-16T13:02:34,045 Skipping link: No binaries permitted for haproh: https://archive1.piwheels.org/simple/haproh/hapROH-0.64-cp37-cp37m-linux_armv6l.whl#sha256=6b10f8779c86afd39cf5133468f3a4024b570426c875359006524b993066df5d (from https://www.piwheels.org/simple/haproh/) (requires-python:>=3.6) 2025-10-16T13:02:34,046 Skipping link: No binaries permitted for haproh: https://archive1.piwheels.org/simple/haproh/hapROH-0.64-cp37-cp37m-linux_armv7l.whl#sha256=6b10f8779c86afd39cf5133468f3a4024b570426c875359006524b993066df5d (from https://www.piwheels.org/simple/haproh/) (requires-python:>=3.6) 2025-10-16T13:02:34,046 Skipping link: No binaries permitted for haproh: https://archive1.piwheels.org/simple/haproh/hapROH-0.64-cp39-cp39-linux_armv6l.whl#sha256=43a69df6a94dd1939db60b6362ec81b40021684169e3ac68604aef0e5379adc2 (from https://www.piwheels.org/simple/haproh/) (requires-python:>=3.6) 2025-10-16T13:02:34,047 Skipping link: No binaries permitted for haproh: https://archive1.piwheels.org/simple/haproh/hapROH-0.64-cp39-cp39-linux_armv7l.whl#sha256=43a69df6a94dd1939db60b6362ec81b40021684169e3ac68604aef0e5379adc2 (from https://www.piwheels.org/simple/haproh/) (requires-python:>=3.6) 2025-10-16T13:02:34,048 Skipping link: No binaries permitted for haproh: https://archive1.piwheels.org/simple/haproh/hapROH-0.64-cp311-cp311-linux_armv6l.whl#sha256=6cce851ec03e70838e8fef2bdbe0bdc6f3b64c91319456187ad7bb6e3edc4e69 (from https://www.piwheels.org/simple/haproh/) (requires-python:>=3.6) 2025-10-16T13:02:34,048 Skipping link: No binaries permitted for haproh: https://archive1.piwheels.org/simple/haproh/hapROH-0.64-cp311-cp311-linux_armv7l.whl#sha256=6cce851ec03e70838e8fef2bdbe0bdc6f3b64c91319456187ad7bb6e3edc4e69 (from https://www.piwheels.org/simple/haproh/) (requires-python:>=3.6) 2025-10-16T13:02:34,049 Skipping link: No binaries permitted for haproh: https://archive1.piwheels.org/simple/haproh/hapROH-0.63-cp37-cp37m-linux_armv6l.whl#sha256=b2296cca3db83e7baca0c78318d12c536f0c6cab135548ebed9e61662aa15868 (from https://www.piwheels.org/simple/haproh/) (requires-python:>=3.6) 2025-10-16T13:02:34,049 Skipping link: No binaries permitted for haproh: https://archive1.piwheels.org/simple/haproh/hapROH-0.63-cp37-cp37m-linux_armv7l.whl#sha256=b2296cca3db83e7baca0c78318d12c536f0c6cab135548ebed9e61662aa15868 (from https://www.piwheels.org/simple/haproh/) (requires-python:>=3.6) 2025-10-16T13:02:34,050 Skipping link: No binaries permitted for haproh: https://archive1.piwheels.org/simple/haproh/hapROH-0.63-cp39-cp39-linux_armv6l.whl#sha256=192bd6c38028a5bb51295502919d475e31a4af35ddd78c44bdce841f41208801 (from https://www.piwheels.org/simple/haproh/) (requires-python:>=3.6) 2025-10-16T13:02:34,050 Skipping link: No binaries permitted for haproh: https://archive1.piwheels.org/simple/haproh/hapROH-0.63-cp39-cp39-linux_armv7l.whl#sha256=192bd6c38028a5bb51295502919d475e31a4af35ddd78c44bdce841f41208801 (from https://www.piwheels.org/simple/haproh/) (requires-python:>=3.6) 2025-10-16T13:02:34,051 Skipping link: No binaries permitted for haproh: https://archive1.piwheels.org/simple/haproh/hapROH-0.63-cp311-cp311-linux_armv6l.whl#sha256=bcfd01720f377739db121fb3b66cc98f0db320e02fe607932783926c888b8f32 (from https://www.piwheels.org/simple/haproh/) (requires-python:>=3.6) 2025-10-16T13:02:34,051 Skipping link: No binaries permitted for haproh: https://archive1.piwheels.org/simple/haproh/hapROH-0.63-cp311-cp311-linux_armv7l.whl#sha256=bcfd01720f377739db121fb3b66cc98f0db320e02fe607932783926c888b8f32 (from https://www.piwheels.org/simple/haproh/) (requires-python:>=3.6) 2025-10-16T13:02:34,052 Skipping link: No binaries permitted for haproh: https://archive1.piwheels.org/simple/haproh/hapROH-0.62-cp37-cp37m-linux_armv6l.whl#sha256=4afb4f9bd2be8c9cbf6abd0bac2a8c2197c1c342000ead827308872615aed812 (from https://www.piwheels.org/simple/haproh/) (requires-python:>=3.6) 2025-10-16T13:02:34,053 Skipping link: No binaries permitted for haproh: https://archive1.piwheels.org/simple/haproh/hapROH-0.62-cp37-cp37m-linux_armv7l.whl#sha256=4afb4f9bd2be8c9cbf6abd0bac2a8c2197c1c342000ead827308872615aed812 (from https://www.piwheels.org/simple/haproh/) (requires-python:>=3.6) 2025-10-16T13:02:34,053 Skipping link: No binaries permitted for haproh: https://archive1.piwheels.org/simple/haproh/hapROH-0.62-cp39-cp39-linux_armv6l.whl#sha256=1680f3792e88e3a91b9feff150db60214a0498c28e09d9451fdfa7e6769b446a (from https://www.piwheels.org/simple/haproh/) (requires-python:>=3.6) 2025-10-16T13:02:34,054 Skipping link: No binaries permitted for haproh: https://archive1.piwheels.org/simple/haproh/hapROH-0.62-cp39-cp39-linux_armv7l.whl#sha256=1680f3792e88e3a91b9feff150db60214a0498c28e09d9451fdfa7e6769b446a (from https://www.piwheels.org/simple/haproh/) (requires-python:>=3.6) 2025-10-16T13:02:34,054 Skipping link: No binaries permitted for haproh: https://archive1.piwheels.org/simple/haproh/hapROH-0.62-cp311-cp311-linux_armv6l.whl#sha256=a91ba2fda30507d876f0bb67399edf1be659b93f6d47e1b307a3334cbd9b5dc1 (from https://www.piwheels.org/simple/haproh/) (requires-python:>=3.6) 2025-10-16T13:02:34,055 Skipping link: No binaries permitted for haproh: https://archive1.piwheels.org/simple/haproh/hapROH-0.62-cp311-cp311-linux_armv7l.whl#sha256=a91ba2fda30507d876f0bb67399edf1be659b93f6d47e1b307a3334cbd9b5dc1 (from https://www.piwheels.org/simple/haproh/) (requires-python:>=3.6) 2025-10-16T13:02:34,055 Skipping link: No binaries permitted for haproh: 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https://www.piwheels.org/simple/haproh/haproh-0.1a1-cp313-cp313-linux_armv7l.whl#sha256=879b231bb1101f69c815a76d71b5d6f2cd86927070be56851a663398a9263b98 (from https://www.piwheels.org/simple/haproh/) (requires-python:>=3.6) 2025-10-16T13:02:34,157 Skipping link: not a file: https://www.piwheels.org/simple/haproh/ 2025-10-16T13:02:34,158 Skipping link: not a file: https://pypi.org/simple/haproh/ 2025-10-16T13:02:34,179 Given no hashes to check 1 links for project 'haproh': discarding no candidates 2025-10-16T13:02:34,197 Collecting haproh==0.70 2025-10-16T13:02:34,199 Created temporary directory: /tmp/pip-unpack-6wkxiert 2025-10-16T13:02:34,338 Downloading haproh-0.70.tar.gz (396 kB) 2025-10-16T13:02:34,617 Added haproh==0.70 from https://files.pythonhosted.org/packages/7c/ce/65a32bcd51a2f7fcf69e0ef5c709d5a726d2e18380aeff5b20925c8d78d5/haproh-0.70.tar.gz to build tracker '/tmp/pip-build-tracker-cks2i8c1' 2025-10-16T13:02:34,623 Created temporary directory: /tmp/pip-build-env-2v8hnk45 2025-10-16T13:02:34,627 Installing build dependencies: started 2025-10-16T13:02:34,628 Running command pip subprocess to install build dependencies 2025-10-16T13:02:35,756 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2025-10-16T13:02:36,380 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2025-10-16T13:02:36,404 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-10-16T13:02:38,187 Collecting setuptools 2025-10-16T13:02:38,289 Using cached https://www.piwheels.org/simple/setuptools/setuptools-80.9.0-py3-none-any.whl (1.2 MB) 2025-10-16T13:02:40,125 Collecting cython 2025-10-16T13:02:40,147 Using cached cython-3.1.4-py3-none-any.whl (1.2 MB) 2025-10-16T13:02:41,173 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/3a/be/650f9c091ef71cb01d735775d554e068752d3ff63d7943b26316dc401749/numpy-1.21.2.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2025-10-16T13:02:41,180 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/5f/d6/ad58ded26556eaeaa8c971e08b6466f17c4ac4d786cd3d800e26ce59cc01/numpy-1.21.3.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2025-10-16T13:02:41,187 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/fb/48/b0708ebd7718a8933f0d3937513ef8ef2f4f04529f1f66ca86d873043921/numpy-1.21.4.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2025-10-16T13:02:41,194 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/c2/a8/a924a09492bdfee8c2ec3094d0a13f2799800b4fdc9c890738aeeb12c72e/numpy-1.21.5.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2025-10-16T13:02:41,201 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/45/b7/de7b8e67f2232c26af57c205aaad29fe17754f793404f59c8a730c7a191a/numpy-1.21.6.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2025-10-16T13:02:41,824 Collecting numpy 2025-10-16T13:02:42,992 Using cached https://www.piwheels.org/simple/numpy/numpy-2.3.3-cp311-cp311-linux_armv7l.whl (6.1 MB) 2025-10-16T13:02:46,170 Installing collected packages: setuptools, numpy, cython 2025-10-16T13:02:59,138 Creating /tmp/pip-build-env-2v8hnk45/overlay/local/bin 2025-10-16T13:02:59,140 changing mode of /tmp/pip-build-env-2v8hnk45/overlay/local/bin/f2py to 755 2025-10-16T13:02:59,143 changing mode of /tmp/pip-build-env-2v8hnk45/overlay/local/bin/numpy-config to 755 2025-10-16T13:03:02,124 changing mode of /tmp/pip-build-env-2v8hnk45/overlay/local/bin/cygdb to 755 2025-10-16T13:03:02,126 changing mode of /tmp/pip-build-env-2v8hnk45/overlay/local/bin/cython to 755 2025-10-16T13:03:02,128 changing mode of /tmp/pip-build-env-2v8hnk45/overlay/local/bin/cythonize to 755 2025-10-16T13:03:02,157 Successfully installed cython-3.1.4 numpy-2.3.3 setuptools-80.9.0 2025-10-16T13:03:02,587 Installing build dependencies: finished with status 'done' 2025-10-16T13:03:02,593 Getting requirements to build wheel: started 2025-10-16T13:03:02,594 Running command Getting requirements to build wheel 2025-10-16T13:03:08,061 warning: hapsburg/cfunc.pyx:650:37: Buffer unpacking not optimized away. 2025-10-16T13:03:08,062 warning: hapsburg/cfunc.pyx:650:37: Buffer unpacking not optimized away. 2025-10-16T13:03:11,761 Compiling hapsburg/cfunc.pyx because it depends on /tmp/pip-build-env-2v8hnk45/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libc/string.pxd. 2025-10-16T13:03:11,762 [1/1] Cythonizing hapsburg/cfunc.pyx 2025-10-16T13:03:11,936 running egg_info 2025-10-16T13:03:11,944 writing hapROH.egg-info/PKG-INFO 2025-10-16T13:03:11,949 writing dependency_links to hapROH.egg-info/dependency_links.txt 2025-10-16T13:03:11,952 writing entry points to hapROH.egg-info/entry_points.txt 2025-10-16T13:03:11,954 writing requirements to hapROH.egg-info/requires.txt 2025-10-16T13:03:11,956 writing top-level names to hapROH.egg-info/top_level.txt 2025-10-16T13:03:11,988 dependency /tmp/pip-build-env-2v8hnk45/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative 2025-10-16T13:03:11,989 dependency /tmp/pip-build-env-2v8hnk45/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative 2025-10-16T13:03:11,990 dependency /tmp/pip-build-env-2v8hnk45/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative 2025-10-16T13:03:11,990 dependency /tmp/pip-build-env-2v8hnk45/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative 2025-10-16T13:03:11,991 dependency /tmp/pip-build-env-2v8hnk45/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative 2025-10-16T13:03:11,998 reading manifest file 'hapROH.egg-info/SOURCES.txt' 2025-10-16T13:03:12,002 reading manifest template 'MANIFEST.in' 2025-10-16T13:03:12,010 adding license file 'LICENSE' 2025-10-16T13:03:12,015 writing manifest file 'hapROH.egg-info/SOURCES.txt' 2025-10-16T13:03:12,650 Getting requirements to build wheel: finished with status 'done' 2025-10-16T13:03:12,653 Created temporary directory: /tmp/pip-modern-metadata-c48i63jp 2025-10-16T13:03:12,655 Preparing metadata (pyproject.toml): started 2025-10-16T13:03:12,657 Running command Preparing metadata (pyproject.toml) 2025-10-16T13:03:14,277 running dist_info 2025-10-16T13:03:14,291 creating /tmp/pip-modern-metadata-c48i63jp/hapROH.egg-info 2025-10-16T13:03:14,292 writing /tmp/pip-modern-metadata-c48i63jp/hapROH.egg-info/PKG-INFO 2025-10-16T13:03:14,297 writing dependency_links to /tmp/pip-modern-metadata-c48i63jp/hapROH.egg-info/dependency_links.txt 2025-10-16T13:03:14,299 writing entry points to /tmp/pip-modern-metadata-c48i63jp/hapROH.egg-info/entry_points.txt 2025-10-16T13:03:14,301 writing requirements to /tmp/pip-modern-metadata-c48i63jp/hapROH.egg-info/requires.txt 2025-10-16T13:03:14,302 writing top-level names to /tmp/pip-modern-metadata-c48i63jp/hapROH.egg-info/top_level.txt 2025-10-16T13:03:14,303 writing manifest file '/tmp/pip-modern-metadata-c48i63jp/hapROH.egg-info/SOURCES.txt' 2025-10-16T13:03:14,335 dependency /tmp/pip-build-env-2v8hnk45/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative 2025-10-16T13:03:14,336 dependency /tmp/pip-build-env-2v8hnk45/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative 2025-10-16T13:03:14,336 dependency /tmp/pip-build-env-2v8hnk45/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative 2025-10-16T13:03:14,337 dependency /tmp/pip-build-env-2v8hnk45/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative 2025-10-16T13:03:14,337 dependency /tmp/pip-build-env-2v8hnk45/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative 2025-10-16T13:03:14,343 reading manifest file '/tmp/pip-modern-metadata-c48i63jp/hapROH.egg-info/SOURCES.txt' 2025-10-16T13:03:14,345 reading manifest template 'MANIFEST.in' 2025-10-16T13:03:14,352 adding license file 'LICENSE' 2025-10-16T13:03:14,356 writing manifest file '/tmp/pip-modern-metadata-c48i63jp/hapROH.egg-info/SOURCES.txt' 2025-10-16T13:03:14,357 creating '/tmp/pip-modern-metadata-c48i63jp/haproh-0.70.dist-info' 2025-10-16T13:03:14,566 Preparing metadata (pyproject.toml): finished with status 'done' 2025-10-16T13:03:14,571 Source in /tmp/pip-wheel-onbxuuvf/haproh_04a620a3c128476baecc754b2a78b8d2 has version 0.70, which satisfies requirement haproh==0.70 from https://files.pythonhosted.org/packages/7c/ce/65a32bcd51a2f7fcf69e0ef5c709d5a726d2e18380aeff5b20925c8d78d5/haproh-0.70.tar.gz 2025-10-16T13:03:14,572 Removed haproh==0.70 from https://files.pythonhosted.org/packages/7c/ce/65a32bcd51a2f7fcf69e0ef5c709d5a726d2e18380aeff5b20925c8d78d5/haproh-0.70.tar.gz from build tracker '/tmp/pip-build-tracker-cks2i8c1' 2025-10-16T13:03:14,577 Created temporary directory: /tmp/pip-unpack-mblg7i19 2025-10-16T13:03:14,578 Building wheels for collected packages: haproh 2025-10-16T13:03:14,583 Created temporary directory: /tmp/pip-wheel-57vjoqhq 2025-10-16T13:03:14,583 Destination directory: /tmp/pip-wheel-57vjoqhq 2025-10-16T13:03:14,585 Building wheel for haproh (pyproject.toml): started 2025-10-16T13:03:14,587 Running command Building wheel for haproh (pyproject.toml) 2025-10-16T13:03:16,144 running bdist_wheel 2025-10-16T13:03:16,171 running build 2025-10-16T13:03:16,172 running build_py 2025-10-16T13:03:16,183 creating build/lib.linux-armv7l-cpython-311/hapsburg 2025-10-16T13:03:16,185 copying hapsburg/preprocessing_lowmem.py -> build/lib.linux-armv7l-cpython-311/hapsburg 2025-10-16T13:03:16,188 copying hapsburg/preprocessing.py -> build/lib.linux-armv7l-cpython-311/hapsburg 2025-10-16T13:03:16,191 copying hapsburg/func.py -> build/lib.linux-armv7l-cpython-311/hapsburg 2025-10-16T13:03:16,193 copying hapsburg/hapCon_ROH.py -> build/lib.linux-armv7l-cpython-311/hapsburg 2025-10-16T13:03:16,196 copying hapsburg/__init__.py -> build/lib.linux-armv7l-cpython-311/hapsburg 2025-10-16T13:03:16,198 copying hapsburg/hmm_inference.py -> build/lib.linux-armv7l-cpython-311/hapsburg 2025-10-16T13:03:16,200 copying hapsburg/hapCONX.py -> build/lib.linux-armv7l-cpython-311/hapsburg 2025-10-16T13:03:16,203 copying hapsburg/emissions_lowmem.py -> build/lib.linux-armv7l-cpython-311/hapsburg 2025-10-16T13:03:16,205 copying hapsburg/emissions.py -> build/lib.linux-armv7l-cpython-311/hapsburg 2025-10-16T13:03:16,208 copying hapsburg/postprocessing.py -> build/lib.linux-armv7l-cpython-311/hapsburg 2025-10-16T13:03:16,210 copying hapsburg/transitions.py -> build/lib.linux-armv7l-cpython-311/hapsburg 2025-10-16T13:03:16,213 copying hapsburg/hapROH_WGS.py -> build/lib.linux-armv7l-cpython-311/hapsburg 2025-10-16T13:03:16,215 creating build/lib.linux-armv7l-cpython-311/hapROH 2025-10-16T13:03:16,216 copying hapROH/__init__.py -> build/lib.linux-armv7l-cpython-311/hapROH 2025-10-16T13:03:16,218 copying hapROH/run.py -> build/lib.linux-armv7l-cpython-311/hapROH 2025-10-16T13:03:16,221 creating build/lib.linux-armv7l-cpython-311/hapsburg/PackagesSupport 2025-10-16T13:03:16,222 copying hapsburg/PackagesSupport/pp_individual_roh_csvs.py -> build/lib.linux-armv7l-cpython-311/hapsburg/PackagesSupport 2025-10-16T13:03:16,225 copying hapsburg/PackagesSupport/roh_expectations.py -> build/lib.linux-armv7l-cpython-311/hapsburg/PackagesSupport 2025-10-16T13:03:16,227 copying hapsburg/PackagesSupport/__init__.py -> build/lib.linux-armv7l-cpython-311/hapsburg/PackagesSupport 2025-10-16T13:03:16,229 copying hapsburg/PackagesSupport/simData.py -> build/lib.linux-armv7l-cpython-311/hapsburg/PackagesSupport 2025-10-16T13:03:16,232 copying hapsburg/PackagesSupport/fit_ne.py -> build/lib.linux-armv7l-cpython-311/hapsburg/PackagesSupport 2025-10-16T13:03:16,235 copying hapsburg/PackagesSupport/hapsburg_run.py -> build/lib.linux-armv7l-cpython-311/hapsburg/PackagesSupport 2025-10-16T13:03:16,238 copying hapsburg/PackagesSupport/sqrt_scale.py -> build/lib.linux-armv7l-cpython-311/hapsburg/PackagesSupport 2025-10-16T13:03:16,241 creating build/lib.linux-armv7l-cpython-311/hapsburg/figures 2025-10-16T13:03:16,242 copying hapsburg/figures/plot_ibdx.py -> build/lib.linux-armv7l-cpython-311/hapsburg/figures 2025-10-16T13:03:16,245 copying hapsburg/figures/__init__.py -> build/lib.linux-armv7l-cpython-311/hapsburg/figures 2025-10-16T13:03:16,247 copying hapsburg/figures/plot_timelines.py -> build/lib.linux-armv7l-cpython-311/hapsburg/figures 2025-10-16T13:03:16,249 copying hapsburg/figures/plot_bars.py -> build/lib.linux-armv7l-cpython-311/hapsburg/figures 2025-10-16T13:03:16,252 copying hapsburg/figures/plot_individual_roh.py -> build/lib.linux-armv7l-cpython-311/hapsburg/figures 2025-10-16T13:03:16,255 copying hapsburg/figures/plot_posterior.py -> build/lib.linux-armv7l-cpython-311/hapsburg/figures 2025-10-16T13:03:16,258 creating build/lib.linux-armv7l-cpython-311/hapsburg/PackagesSupport/loadEigenstrat 2025-10-16T13:03:16,259 copying hapsburg/PackagesSupport/loadEigenstrat/loadEigenstrat.py -> build/lib.linux-armv7l-cpython-311/hapsburg/PackagesSupport/loadEigenstrat 2025-10-16T13:03:16,261 copying hapsburg/PackagesSupport/loadEigenstrat/__init__.py -> build/lib.linux-armv7l-cpython-311/hapsburg/PackagesSupport/loadEigenstrat 2025-10-16T13:03:16,263 copying hapsburg/PackagesSupport/loadEigenstrat/saveHDF5.py -> build/lib.linux-armv7l-cpython-311/hapsburg/PackagesSupport/loadEigenstrat 2025-10-16T13:03:16,267 creating build/lib.linux-armv7l-cpython-311/hapsburg/PackagesSupport/parallel_runs 2025-10-16T13:03:16,268 copying hapsburg/PackagesSupport/parallel_runs/helper_functions.py -> build/lib.linux-armv7l-cpython-311/hapsburg/PackagesSupport/parallel_runs 2025-10-16T13:03:16,271 copying hapsburg/PackagesSupport/parallel_runs/__init__.py -> build/lib.linux-armv7l-cpython-311/hapsburg/PackagesSupport/parallel_runs 2025-10-16T13:03:16,273 creating build/lib.linux-armv7l-cpython-311/hapsburg/PackagesSupport/h5_python 2025-10-16T13:03:16,274 copying hapsburg/PackagesSupport/h5_python/__init__.py -> build/lib.linux-armv7l-cpython-311/hapsburg/PackagesSupport/h5_python 2025-10-16T13:03:16,276 copying hapsburg/PackagesSupport/h5_python/h5_functions.py -> build/lib.linux-armv7l-cpython-311/hapsburg/PackagesSupport/h5_python 2025-10-16T13:03:16,279 running egg_info 2025-10-16T13:03:16,293 writing hapROH.egg-info/PKG-INFO 2025-10-16T13:03:16,298 writing dependency_links to hapROH.egg-info/dependency_links.txt 2025-10-16T13:03:16,299 writing entry points to hapROH.egg-info/entry_points.txt 2025-10-16T13:03:16,301 writing requirements to hapROH.egg-info/requires.txt 2025-10-16T13:03:16,302 writing top-level names to hapROH.egg-info/top_level.txt 2025-10-16T13:03:16,313 dependency /tmp/pip-build-env-2v8hnk45/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative 2025-10-16T13:03:16,314 dependency /tmp/pip-build-env-2v8hnk45/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative 2025-10-16T13:03:16,314 dependency /tmp/pip-build-env-2v8hnk45/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative 2025-10-16T13:03:16,315 dependency /tmp/pip-build-env-2v8hnk45/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative 2025-10-16T13:03:16,315 dependency /tmp/pip-build-env-2v8hnk45/overlay/local/lib/python3.11/dist-packages/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative 2025-10-16T13:03:16,321 reading manifest file 'hapROH.egg-info/SOURCES.txt' 2025-10-16T13:03:16,325 reading manifest template 'MANIFEST.in' 2025-10-16T13:03:16,340 adding license file 'LICENSE' 2025-10-16T13:03:16,344 writing manifest file 'hapROH.egg-info/SOURCES.txt' 2025-10-16T13:03:16,350 copying hapsburg/cfunc.c -> build/lib.linux-armv7l-cpython-311/hapsburg 2025-10-16T13:03:16,399 copying hapsburg/cfunc.pyx -> build/lib.linux-armv7l-cpython-311/hapsburg 2025-10-16T13:03:16,402 creating build/lib.linux-armv7l-cpython-311/hapsburg/.ipynb_checkpoints 2025-10-16T13:03:16,404 copying hapsburg/.ipynb_checkpoints/cfunc-checkpoint.pyx -> build/lib.linux-armv7l-cpython-311/hapsburg/.ipynb_checkpoints 2025-10-16T13:03:16,410 running build_ext 2025-10-16T13:03:16,418 building 'hapsburg.cfunc' extension 2025-10-16T13:03:16,419 creating build/temp.linux-armv7l-cpython-311/hapsburg 2025-10-16T13:03:16,421 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-2v8hnk45/overlay/local/lib/python3.11/dist-packages/numpy/_core/include -I/usr/include/python3.11 -c hapsburg/cfunc.c -o build/temp.linux-armv7l-cpython-311/hapsburg/cfunc.o 2025-10-16T13:03:27,108 hapsburg/cfunc.c: In function ‘__Pyx_Unpacked___Pyx_PyLong_AndObjC’: 2025-10-16T13:03:27,151 hapsburg/cfunc.c:47524:32: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 2025-10-16T13:03:27,152 47524 | if ((intval & PyLong_MASK) == intval) { 2025-10-16T13:03:27,152 | ^~ 2025-10-16T13:03:27,195 hapsburg/cfunc.c:47526:67: warning: operand of ‘?:’ changes signedness from ‘long int’ to ‘long unsigned int’ due to unsignedness of other operand [-Wsign-compare] 2025-10-16T13:03:27,196 47526 | long result = intval & (likely(__Pyx_PyLong_IsPos(op1)) ? last_digit : (PyLong_MASK - last_digit + 1)); 2025-10-16T13:03:27,196 | ^~~~~~~~~~ 2025-10-16T13:04:21,769 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/hapsburg/cfunc.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/hapsburg/cfunc.cpython-311-arm-linux-gnueabihf.so 2025-10-16T13:04:21,972 installing to build/bdist.linux-armv7l/wheel 2025-10-16T13:04:21,972 running install 2025-10-16T13:04:21,997 running install_lib 2025-10-16T13:04:22,005 creating build/bdist.linux-armv7l/wheel 2025-10-16T13:04:22,007 creating build/bdist.linux-armv7l/wheel/hapsburg 2025-10-16T13:04:22,009 copying build/lib.linux-armv7l-cpython-311/hapsburg/preprocessing_lowmem.py -> build/bdist.linux-armv7l/wheel/./hapsburg 2025-10-16T13:04:22,013 copying build/lib.linux-armv7l-cpython-311/hapsburg/preprocessing.py -> build/bdist.linux-armv7l/wheel/./hapsburg 2025-10-16T13:04:22,017 creating build/bdist.linux-armv7l/wheel/hapsburg/.ipynb_checkpoints 2025-10-16T13:04:22,019 copying build/lib.linux-armv7l-cpython-311/hapsburg/.ipynb_checkpoints/cfunc-checkpoint.pyx -> build/bdist.linux-armv7l/wheel/./hapsburg/.ipynb_checkpoints 2025-10-16T13:04:22,022 copying build/lib.linux-armv7l-cpython-311/hapsburg/func.py -> build/bdist.linux-armv7l/wheel/./hapsburg 2025-10-16T13:04:22,024 copying build/lib.linux-armv7l-cpython-311/hapsburg/cfunc.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./hapsburg 2025-10-16T13:04:22,113 creating build/bdist.linux-armv7l/wheel/hapsburg/PackagesSupport 2025-10-16T13:04:22,115 copying build/lib.linux-armv7l-cpython-311/hapsburg/PackagesSupport/pp_individual_roh_csvs.py -> build/bdist.linux-armv7l/wheel/./hapsburg/PackagesSupport 2025-10-16T13:04:22,118 copying build/lib.linux-armv7l-cpython-311/hapsburg/PackagesSupport/roh_expectations.py -> build/bdist.linux-armv7l/wheel/./hapsburg/PackagesSupport 2025-10-16T13:04:22,121 creating build/bdist.linux-armv7l/wheel/hapsburg/PackagesSupport/loadEigenstrat 2025-10-16T13:04:22,122 copying build/lib.linux-armv7l-cpython-311/hapsburg/PackagesSupport/loadEigenstrat/loadEigenstrat.py -> build/bdist.linux-armv7l/wheel/./hapsburg/PackagesSupport/loadEigenstrat 2025-10-16T13:04:22,125 copying build/lib.linux-armv7l-cpython-311/hapsburg/PackagesSupport/loadEigenstrat/__init__.py -> build/bdist.linux-armv7l/wheel/./hapsburg/PackagesSupport/loadEigenstrat 2025-10-16T13:04:22,127 copying build/lib.linux-armv7l-cpython-311/hapsburg/PackagesSupport/loadEigenstrat/saveHDF5.py -> build/bdist.linux-armv7l/wheel/./hapsburg/PackagesSupport/loadEigenstrat 2025-10-16T13:04:22,130 copying build/lib.linux-armv7l-cpython-311/hapsburg/PackagesSupport/__init__.py -> build/bdist.linux-armv7l/wheel/./hapsburg/PackagesSupport 2025-10-16T13:04:22,133 creating build/bdist.linux-armv7l/wheel/hapsburg/PackagesSupport/parallel_runs 2025-10-16T13:04:22,135 copying build/lib.linux-armv7l-cpython-311/hapsburg/PackagesSupport/parallel_runs/helper_functions.py -> build/bdist.linux-armv7l/wheel/./hapsburg/PackagesSupport/parallel_runs 2025-10-16T13:04:22,139 copying build/lib.linux-armv7l-cpython-311/hapsburg/PackagesSupport/parallel_runs/__init__.py -> build/bdist.linux-armv7l/wheel/./hapsburg/PackagesSupport/parallel_runs 2025-10-16T13:04:22,141 copying build/lib.linux-armv7l-cpython-311/hapsburg/PackagesSupport/simData.py -> build/bdist.linux-armv7l/wheel/./hapsburg/PackagesSupport 2025-10-16T13:04:22,144 copying build/lib.linux-armv7l-cpython-311/hapsburg/PackagesSupport/fit_ne.py -> build/bdist.linux-armv7l/wheel/./hapsburg/PackagesSupport 2025-10-16T13:04:22,148 copying build/lib.linux-armv7l-cpython-311/hapsburg/PackagesSupport/hapsburg_run.py -> build/bdist.linux-armv7l/wheel/./hapsburg/PackagesSupport 2025-10-16T13:04:22,153 creating build/bdist.linux-armv7l/wheel/hapsburg/PackagesSupport/h5_python 2025-10-16T13:04:22,154 copying build/lib.linux-armv7l-cpython-311/hapsburg/PackagesSupport/h5_python/__init__.py -> build/bdist.linux-armv7l/wheel/./hapsburg/PackagesSupport/h5_python 2025-10-16T13:04:22,157 copying build/lib.linux-armv7l-cpython-311/hapsburg/PackagesSupport/h5_python/h5_functions.py -> build/bdist.linux-armv7l/wheel/./hapsburg/PackagesSupport/h5_python 2025-10-16T13:04:22,161 copying build/lib.linux-armv7l-cpython-311/hapsburg/PackagesSupport/sqrt_scale.py -> build/bdist.linux-armv7l/wheel/./hapsburg/PackagesSupport 2025-10-16T13:04:22,164 copying build/lib.linux-armv7l-cpython-311/hapsburg/hapCon_ROH.py -> build/bdist.linux-armv7l/wheel/./hapsburg 2025-10-16T13:04:22,166 copying build/lib.linux-armv7l-cpython-311/hapsburg/cfunc.pyx -> build/bdist.linux-armv7l/wheel/./hapsburg 2025-10-16T13:04:22,170 copying build/lib.linux-armv7l-cpython-311/hapsburg/__init__.py -> build/bdist.linux-armv7l/wheel/./hapsburg 2025-10-16T13:04:22,172 copying build/lib.linux-armv7l-cpython-311/hapsburg/hmm_inference.py -> build/bdist.linux-armv7l/wheel/./hapsburg 2025-10-16T13:04:22,175 copying build/lib.linux-armv7l-cpython-311/hapsburg/cfunc.c -> build/bdist.linux-armv7l/wheel/./hapsburg 2025-10-16T13:04:22,256 creating build/bdist.linux-armv7l/wheel/hapsburg/figures 2025-10-16T13:04:22,257 copying build/lib.linux-armv7l-cpython-311/hapsburg/figures/plot_ibdx.py -> build/bdist.linux-armv7l/wheel/./hapsburg/figures 2025-10-16T13:04:22,260 copying build/lib.linux-armv7l-cpython-311/hapsburg/figures/__init__.py -> build/bdist.linux-armv7l/wheel/./hapsburg/figures 2025-10-16T13:04:22,262 copying build/lib.linux-armv7l-cpython-311/hapsburg/figures/plot_timelines.py -> build/bdist.linux-armv7l/wheel/./hapsburg/figures 2025-10-16T13:04:22,265 copying build/lib.linux-armv7l-cpython-311/hapsburg/figures/plot_bars.py -> build/bdist.linux-armv7l/wheel/./hapsburg/figures 2025-10-16T13:04:22,268 copying build/lib.linux-armv7l-cpython-311/hapsburg/figures/plot_individual_roh.py -> build/bdist.linux-armv7l/wheel/./hapsburg/figures 2025-10-16T13:04:22,271 copying build/lib.linux-armv7l-cpython-311/hapsburg/figures/plot_posterior.py -> build/bdist.linux-armv7l/wheel/./hapsburg/figures 2025-10-16T13:04:22,273 copying build/lib.linux-armv7l-cpython-311/hapsburg/hapCONX.py -> build/bdist.linux-armv7l/wheel/./hapsburg 2025-10-16T13:04:22,276 copying build/lib.linux-armv7l-cpython-311/hapsburg/emissions_lowmem.py -> build/bdist.linux-armv7l/wheel/./hapsburg 2025-10-16T13:04:22,279 copying build/lib.linux-armv7l-cpython-311/hapsburg/emissions.py -> build/bdist.linux-armv7l/wheel/./hapsburg 2025-10-16T13:04:22,281 copying build/lib.linux-armv7l-cpython-311/hapsburg/postprocessing.py -> build/bdist.linux-armv7l/wheel/./hapsburg 2025-10-16T13:04:22,284 copying build/lib.linux-armv7l-cpython-311/hapsburg/transitions.py -> build/bdist.linux-armv7l/wheel/./hapsburg 2025-10-16T13:04:22,286 copying build/lib.linux-armv7l-cpython-311/hapsburg/hapROH_WGS.py -> build/bdist.linux-armv7l/wheel/./hapsburg 2025-10-16T13:04:22,289 creating build/bdist.linux-armv7l/wheel/hapROH 2025-10-16T13:04:22,290 copying build/lib.linux-armv7l-cpython-311/hapROH/__init__.py -> build/bdist.linux-armv7l/wheel/./hapROH 2025-10-16T13:04:22,292 copying build/lib.linux-armv7l-cpython-311/hapROH/run.py -> build/bdist.linux-armv7l/wheel/./hapROH 2025-10-16T13:04:22,294 running install_egg_info 2025-10-16T13:04:22,301 Copying hapROH.egg-info to build/bdist.linux-armv7l/wheel/./hapROH-0.70-py3.11.egg-info 2025-10-16T13:04:22,314 running install_scripts 2025-10-16T13:04:22,363 creating build/bdist.linux-armv7l/wheel/haproh-0.70.dist-info/WHEEL 2025-10-16T13:04:22,367 creating '/tmp/pip-wheel-57vjoqhq/.tmp-zq4fkhos/haproh-0.70-cp311-cp311-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-10-16T13:04:22,369 adding 'hapROH/__init__.py' 2025-10-16T13:04:22,371 adding 'hapROH/run.py' 2025-10-16T13:04:22,385 adding 'haproh-0.70.dist-info/licenses/LICENSE' 2025-10-16T13:04:22,387 adding 'hapsburg/__init__.py' 2025-10-16T13:04:22,600 adding 'hapsburg/cfunc.c' 2025-10-16T13:04:23,138 adding 'hapsburg/cfunc.cpython-311-arm-linux-gnueabihf.so' 2025-10-16T13:04:23,157 adding 'hapsburg/cfunc.pyx' 2025-10-16T13:04:23,160 adding 'hapsburg/emissions.py' 2025-10-16T13:04:23,162 adding 'hapsburg/emissions_lowmem.py' 2025-10-16T13:04:23,164 adding 'hapsburg/func.py' 2025-10-16T13:04:23,166 adding 'hapsburg/hapCONX.py' 2025-10-16T13:04:23,168 adding 'hapsburg/hapCon_ROH.py' 2025-10-16T13:04:23,170 adding 'hapsburg/hapROH_WGS.py' 2025-10-16T13:04:23,173 adding 'hapsburg/hmm_inference.py' 2025-10-16T13:04:23,175 adding 'hapsburg/postprocessing.py' 2025-10-16T13:04:23,180 adding 'hapsburg/preprocessing.py' 2025-10-16T13:04:23,182 adding 'hapsburg/preprocessing_lowmem.py' 2025-10-16T13:04:23,184 adding 'hapsburg/transitions.py' 2025-10-16T13:04:23,188 adding 'hapsburg/.ipynb_checkpoints/cfunc-checkpoint.pyx' 2025-10-16T13:04:23,190 adding 'hapsburg/PackagesSupport/__init__.py' 2025-10-16T13:04:23,193 adding 'hapsburg/PackagesSupport/fit_ne.py' 2025-10-16T13:04:23,198 adding 'hapsburg/PackagesSupport/hapsburg_run.py' 2025-10-16T13:04:23,201 adding 'hapsburg/PackagesSupport/pp_individual_roh_csvs.py' 2025-10-16T13:04:23,203 adding 'hapsburg/PackagesSupport/roh_expectations.py' 2025-10-16T13:04:23,206 adding 'hapsburg/PackagesSupport/simData.py' 2025-10-16T13:04:23,208 adding 'hapsburg/PackagesSupport/sqrt_scale.py' 2025-10-16T13:04:23,209 adding 'hapsburg/PackagesSupport/h5_python/__init__.py' 2025-10-16T13:04:23,213 adding 'hapsburg/PackagesSupport/h5_python/h5_functions.py' 2025-10-16T13:04:23,215 adding 'hapsburg/PackagesSupport/loadEigenstrat/__init__.py' 2025-10-16T13:04:23,217 adding 'hapsburg/PackagesSupport/loadEigenstrat/loadEigenstrat.py' 2025-10-16T13:04:23,220 adding 'hapsburg/PackagesSupport/loadEigenstrat/saveHDF5.py' 2025-10-16T13:04:23,222 adding 'hapsburg/PackagesSupport/parallel_runs/__init__.py' 2025-10-16T13:04:23,224 adding 'hapsburg/PackagesSupport/parallel_runs/helper_functions.py' 2025-10-16T13:04:23,226 adding 'hapsburg/figures/__init__.py' 2025-10-16T13:04:23,228 adding 'hapsburg/figures/plot_bars.py' 2025-10-16T13:04:23,230 adding 'hapsburg/figures/plot_ibdx.py' 2025-10-16T13:04:23,233 adding 'hapsburg/figures/plot_individual_roh.py' 2025-10-16T13:04:23,235 adding 'hapsburg/figures/plot_posterior.py' 2025-10-16T13:04:23,238 adding 'hapsburg/figures/plot_timelines.py' 2025-10-16T13:04:23,240 adding 'haproh-0.70.dist-info/METADATA' 2025-10-16T13:04:23,241 adding 'haproh-0.70.dist-info/WHEEL' 2025-10-16T13:04:23,243 adding 'haproh-0.70.dist-info/entry_points.txt' 2025-10-16T13:04:23,244 adding 'haproh-0.70.dist-info/top_level.txt' 2025-10-16T13:04:23,245 adding 'haproh-0.70.dist-info/RECORD' 2025-10-16T13:04:23,263 removing build/bdist.linux-armv7l/wheel 2025-10-16T13:04:23,490 Building wheel for haproh (pyproject.toml): finished with status 'done' 2025-10-16T13:04:23,521 Created wheel for haproh: filename=haproh-0.70-cp311-cp311-linux_armv7l.whl size=1394900 sha256=15392116d9dad90e0455162b3c1d331c10e7bcd9d38148544703c36b61e67477 2025-10-16T13:04:23,523 Stored in directory: /tmp/pip-ephem-wheel-cache-hpxes4hg/wheels/1b/f2/20/51162ce906bee201115e5affb63c2da62f84107d767cfee97c 2025-10-16T13:04:23,537 Successfully built haproh 2025-10-16T13:04:23,571 Removed build tracker: '/tmp/pip-build-tracker-cks2i8c1'