2025-10-16T15:21:34,369 Created temporary directory: /tmp/pip-build-tracker-834n32tp
2025-10-16T15:21:34,370 Initialized build tracking at /tmp/pip-build-tracker-834n32tp
2025-10-16T15:21:34,370 Created build tracker: /tmp/pip-build-tracker-834n32tp
2025-10-16T15:21:34,370 Entered build tracker: /tmp/pip-build-tracker-834n32tp
2025-10-16T15:21:34,370 Created temporary directory: /tmp/pip-wheel-zo1321j0
2025-10-16T15:21:34,373 Created temporary directory: /tmp/pip-ephem-wheel-cache-g2i38y2p
2025-10-16T15:21:34,436 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2025-10-16T15:21:34,438 2 location(s) to search for versions of mamonca:
2025-10-16T15:21:34,438 * https://pypi.org/simple/mamonca/
2025-10-16T15:21:34,438 * https://www.piwheels.org/simple/mamonca/
2025-10-16T15:21:34,439 Fetching project page and analyzing links: https://pypi.org/simple/mamonca/
2025-10-16T15:21:34,439 Getting page https://pypi.org/simple/mamonca/
2025-10-16T15:21:34,440 Found index url https://pypi.org/simple/
2025-10-16T15:21:34,588 Fetched page https://pypi.org/simple/mamonca/ as application/vnd.pypi.simple.v1+json
2025-10-16T15:21:34,591   Found link https://files.pythonhosted.org/packages/ba/83/1ff4c5886fa360f87189936cf4403837103e77bae20e317a08e07b1d14cf/mamonca-0.0.1.tar.gz (from https://pypi.org/simple/mamonca/), version: 0.0.1
2025-10-16T15:21:34,592   Found link https://files.pythonhosted.org/packages/95/12/604f1eb9d711f9bfb863e053647d758a69f818b700638fec56f6997b025d/mamonca-0.0.2.tar.gz (from https://pypi.org/simple/mamonca/), version: 0.0.2
2025-10-16T15:21:34,592   Found link https://files.pythonhosted.org/packages/c1/99/54c22b54d2b736a25a7672ffc38fd16bc67d424451602d27a2f1af8a854c/mamonca-0.0.3.tar.gz (from https://pypi.org/simple/mamonca/), version: 0.0.3
2025-10-16T15:21:34,593   Found link https://files.pythonhosted.org/packages/f6/65/26203ff6a99091ce3b23729c04d0b0cc36d5d60c62cbaf1a01690a18c2ae/mamonca-0.0.5.tar.gz (from https://pypi.org/simple/mamonca/), version: 0.0.5
2025-10-16T15:21:34,593   Found link https://files.pythonhosted.org/packages/5c/78/eab4c10cd1fb5d206646b27fc6eaa1f9418c934723d33dcbdb055771da8e/mamonca-0.0.7.tar.gz (from https://pypi.org/simple/mamonca/), version: 0.0.7
2025-10-16T15:21:34,594   Found link https://files.pythonhosted.org/packages/69/78/223324f1bb83af870ba067353b514d9dfe83cf5a852e9d36cc37a500a012/mamonca-0.0.8.tar.gz (from https://pypi.org/simple/mamonca/), version: 0.0.8
2025-10-16T15:21:34,594 Fetching project page and analyzing links: https://www.piwheels.org/simple/mamonca/
2025-10-16T15:21:34,595 Getting page https://www.piwheels.org/simple/mamonca/
2025-10-16T15:21:34,597 Found index url https://www.piwheels.org/simple/
2025-10-16T15:21:34,715 Fetched page https://www.piwheels.org/simple/mamonca/ as text/html
2025-10-16T15:21:34,719   Skipping link: No binaries permitted for mamonca: https://archive1.piwheels.org/simple/mamonca/mamonca-0.0.8-cp311-cp311-linux_armv6l.whl#sha256=254fb246372823f36e2ced4286b1dda40af9f749533b34a59fe3a7a7afa32a91 (from https://www.piwheels.org/simple/mamonca/)
2025-10-16T15:21:34,719   Skipping link: No binaries permitted for mamonca: https://archive1.piwheels.org/simple/mamonca/mamonca-0.0.8-cp311-cp311-linux_armv7l.whl#sha256=254fb246372823f36e2ced4286b1dda40af9f749533b34a59fe3a7a7afa32a91 (from https://www.piwheels.org/simple/mamonca/)
2025-10-16T15:21:34,719   Skipping link: No binaries permitted for mamonca: https://archive1.piwheels.org/simple/mamonca/mamonca-0.0.8-cp37-cp37m-linux_armv6l.whl#sha256=c3146707eff4ce53137395ac99f4cc25e3610c483cc8f7b1fd0c097ce7901ee4 (from https://www.piwheels.org/simple/mamonca/)
2025-10-16T15:21:34,720   Skipping link: No binaries permitted for mamonca: https://archive1.piwheels.org/simple/mamonca/mamonca-0.0.8-cp37-cp37m-linux_armv7l.whl#sha256=c3146707eff4ce53137395ac99f4cc25e3610c483cc8f7b1fd0c097ce7901ee4 (from https://www.piwheels.org/simple/mamonca/)
2025-10-16T15:21:34,720   Skipping link: No binaries permitted for mamonca: https://archive1.piwheels.org/simple/mamonca/mamonca-0.0.8-cp39-cp39-linux_armv6l.whl#sha256=b5168632952299efcab663cc33a6d82982f5c96381d52fd6870eaaf05a4733d1 (from https://www.piwheels.org/simple/mamonca/)
2025-10-16T15:21:34,720   Skipping link: No binaries permitted for mamonca: https://archive1.piwheels.org/simple/mamonca/mamonca-0.0.8-cp39-cp39-linux_armv7l.whl#sha256=b5168632952299efcab663cc33a6d82982f5c96381d52fd6870eaaf05a4733d1 (from https://www.piwheels.org/simple/mamonca/)
2025-10-16T15:21:34,720   Skipping link: No binaries permitted for mamonca: https://archive1.piwheels.org/simple/mamonca/mamonca-0.0.7-cp37-cp37m-linux_armv6l.whl#sha256=c3420bfcc078abf7a16af2ad67842ed46a353261a1459d6012000b835fd94968 (from https://www.piwheels.org/simple/mamonca/)
2025-10-16T15:21:34,720   Skipping link: No binaries permitted for mamonca: https://archive1.piwheels.org/simple/mamonca/mamonca-0.0.7-cp37-cp37m-linux_armv7l.whl#sha256=c3420bfcc078abf7a16af2ad67842ed46a353261a1459d6012000b835fd94968 (from https://www.piwheels.org/simple/mamonca/)
2025-10-16T15:21:34,720   Skipping link: No binaries permitted for mamonca: https://archive1.piwheels.org/simple/mamonca/mamonca-0.0.7-cp39-cp39-linux_armv6l.whl#sha256=c6d28abcb02827bae727664be49c694c7f80bd2991bb1b77803300372d3a0278 (from https://www.piwheels.org/simple/mamonca/)
2025-10-16T15:21:34,720   Skipping link: No binaries permitted for mamonca: https://archive1.piwheels.org/simple/mamonca/mamonca-0.0.7-cp39-cp39-linux_armv7l.whl#sha256=c6d28abcb02827bae727664be49c694c7f80bd2991bb1b77803300372d3a0278 (from https://www.piwheels.org/simple/mamonca/)
2025-10-16T15:21:34,720   Skipping link: No binaries permitted for mamonca: https://archive1.piwheels.org/simple/mamonca/mamonca-0.0.7-cp311-cp311-linux_armv6l.whl#sha256=68772adb7a86dda1dfdf98892b4fbb9800897c345feae6a4dd4f54578fee82ca (from https://www.piwheels.org/simple/mamonca/)
2025-10-16T15:21:34,721   Skipping link: No binaries permitted for mamonca: https://archive1.piwheels.org/simple/mamonca/mamonca-0.0.7-cp311-cp311-linux_armv7l.whl#sha256=68772adb7a86dda1dfdf98892b4fbb9800897c345feae6a4dd4f54578fee82ca (from https://www.piwheels.org/simple/mamonca/)
2025-10-16T15:21:34,721   Skipping link: No binaries permitted for mamonca: https://www.piwheels.org/simple/mamonca/mamonca-0.0.7-cp313-cp313-linux_armv6l.whl#sha256=a82c0be625507633f0bc95a82eddf2e47a49bdf40a720a07942c0bac680e3efb (from https://www.piwheels.org/simple/mamonca/)
2025-10-16T15:21:34,721   Skipping link: No binaries permitted for mamonca: https://www.piwheels.org/simple/mamonca/mamonca-0.0.7-cp313-cp313-linux_armv7l.whl#sha256=a82c0be625507633f0bc95a82eddf2e47a49bdf40a720a07942c0bac680e3efb (from https://www.piwheels.org/simple/mamonca/)
2025-10-16T15:21:34,721   Skipping link: No binaries permitted for mamonca: https://archive1.piwheels.org/simple/mamonca/mamonca-0.0.5-cp37-cp37m-linux_armv6l.whl#sha256=f1462ef25e3e2eea6e4b125748ac76a37b54a23ad765f02a5d41faecbaecff6a (from https://www.piwheels.org/simple/mamonca/)
2025-10-16T15:21:34,721   Skipping link: No binaries permitted for mamonca: https://archive1.piwheels.org/simple/mamonca/mamonca-0.0.5-cp37-cp37m-linux_armv7l.whl#sha256=f1462ef25e3e2eea6e4b125748ac76a37b54a23ad765f02a5d41faecbaecff6a (from https://www.piwheels.org/simple/mamonca/)
2025-10-16T15:21:34,721   Skipping link: No binaries permitted for mamonca: https://archive1.piwheels.org/simple/mamonca/mamonca-0.0.5-cp39-cp39-linux_armv6l.whl#sha256=5d2a82abe3b04165d861ed28ccdaba7b26e532e5245869f7267f197d89337d80 (from https://www.piwheels.org/simple/mamonca/)
2025-10-16T15:21:34,721   Skipping link: No binaries permitted for mamonca: https://archive1.piwheels.org/simple/mamonca/mamonca-0.0.5-cp39-cp39-linux_armv7l.whl#sha256=5d2a82abe3b04165d861ed28ccdaba7b26e532e5245869f7267f197d89337d80 (from https://www.piwheels.org/simple/mamonca/)
2025-10-16T15:21:34,721   Skipping link: No binaries permitted for mamonca: https://archive1.piwheels.org/simple/mamonca/mamonca-0.0.5-cp311-cp311-linux_armv6l.whl#sha256=fa40cf131c9f952b70dd53ff9ce358ebb82e09d1cd743b2016ac3fd37d673047 (from https://www.piwheels.org/simple/mamonca/)
2025-10-16T15:21:34,722   Skipping link: No binaries permitted for mamonca: https://archive1.piwheels.org/simple/mamonca/mamonca-0.0.5-cp311-cp311-linux_armv7l.whl#sha256=fa40cf131c9f952b70dd53ff9ce358ebb82e09d1cd743b2016ac3fd37d673047 (from https://www.piwheels.org/simple/mamonca/)
2025-10-16T15:21:34,722   Skipping link: No binaries permitted for mamonca: https://archive1.piwheels.org/simple/mamonca/mamonca-0.0.3-py3-none-any.whl#sha256=32e0f900c2b2a3a801b564142c233a259c8f153f3884cb84849ac3df8676eafa (from https://www.piwheels.org/simple/mamonca/)
2025-10-16T15:21:34,722 Skipping link: not a file: https://www.piwheels.org/simple/mamonca/
2025-10-16T15:21:34,722 Skipping link: not a file: https://pypi.org/simple/mamonca/
2025-10-16T15:21:34,749 Given no hashes to check 1 links for project 'mamonca': discarding no candidates
2025-10-16T15:21:34,750 Collecting mamonca==0.0.5
2025-10-16T15:21:34,752   Created temporary directory: /tmp/pip-unpack-foybfl53
2025-10-16T15:21:34,811   Downloading mamonca-0.0.5.tar.gz (68 kB)
2025-10-16T15:21:34,871   Added mamonca==0.0.5 from https://files.pythonhosted.org/packages/f6/65/26203ff6a99091ce3b23729c04d0b0cc36d5d60c62cbaf1a01690a18c2ae/mamonca-0.0.5.tar.gz to build tracker '/tmp/pip-build-tracker-834n32tp'
2025-10-16T15:21:34,872   Running setup.py (path:/tmp/pip-wheel-zo1321j0/mamonca_d9f87ccf4c2b4fb292660e9cd31ad419/setup.py) egg_info for package mamonca
2025-10-16T15:21:34,873   Created temporary directory: /tmp/pip-pip-egg-info-ey7mqtod
2025-10-16T15:21:34,873   Preparing metadata (setup.py): started
2025-10-16T15:21:34,874   Running command python setup.py egg_info
2025-10-16T15:21:38,046   Compiling mamonca/mc.pyx because it changed.
2025-10-16T15:21:38,046   [1/1] Cythonizing mamonca/mc.pyx
2025-10-16T15:21:39,030   Preparing metadata (setup.py): finished with status 'done'
2025-10-16T15:21:39,034   Source in /tmp/pip-wheel-zo1321j0/mamonca_d9f87ccf4c2b4fb292660e9cd31ad419 has version 0.0.5, which satisfies requirement mamonca==0.0.5 from https://files.pythonhosted.org/packages/f6/65/26203ff6a99091ce3b23729c04d0b0cc36d5d60c62cbaf1a01690a18c2ae/mamonca-0.0.5.tar.gz
2025-10-16T15:21:39,035   Removed mamonca==0.0.5 from https://files.pythonhosted.org/packages/f6/65/26203ff6a99091ce3b23729c04d0b0cc36d5d60c62cbaf1a01690a18c2ae/mamonca-0.0.5.tar.gz from build tracker '/tmp/pip-build-tracker-834n32tp'
2025-10-16T15:21:39,037 Created temporary directory: /tmp/pip-unpack-sdjg2sf6
2025-10-16T15:21:39,038 Created temporary directory: /tmp/pip-unpack-1gxu6ad_
2025-10-16T15:21:39,038 Building wheels for collected packages: mamonca
2025-10-16T15:21:39,039   Created temporary directory: /tmp/pip-wheel-0et34cm3
2025-10-16T15:21:39,039   DEPRECATION: Building 'mamonca' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'mamonca'. Discussion can be found at https://github.com/pypa/pip/issues/6334
2025-10-16T15:21:39,040   Building wheel for mamonca (setup.py): started
2025-10-16T15:21:39,041   Destination directory: /tmp/pip-wheel-0et34cm3
2025-10-16T15:21:39,041   Running command python setup.py bdist_wheel
2025-10-16T15:21:49,911   In file included from /usr/include/c++/14/vector:72,
2025-10-16T15:21:49,911                    from mamonca/mc.cpp:1163:
2025-10-16T15:21:49,911   /usr/include/c++/14/bits/vector.tcc: In function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Tp = double; _Alloc = std::allocator<double>]’:
2025-10-16T15:21:49,911   /usr/include/c++/14/bits/vector.tcc:954:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2025-10-16T15:21:49,911     954 |       vector<_Tp, _Alloc>::
2025-10-16T15:21:49,911         |       ^~~~~~~~~~~~~~~~~~~
2025-10-16T15:21:49,911   /usr/include/c++/14/bits/vector.tcc:954:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2025-10-16T15:21:49,912   /usr/include/c++/14/bits/vector.tcc:954:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2025-10-16T15:21:56,217   In file included from /usr/include/c++/14/vector:66:
2025-10-16T15:21:56,218   In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; <template-parameter-2-2> = void; _Tp = double; _Alloc = std::allocator<double>]’,
2025-10-16T15:21:56,218       inlined from ‘std::vector<double> Metadynamics::get_histogram(std::vector<double>&, int)’ at mamonca/cMC.cpp:846:23:
2025-10-16T15:21:56,218   /usr/include/c++/14/bits/stl_vector.h:1488:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2025-10-16T15:21:56,218    1488 |           _M_range_insert(begin() + __offset, __first, __last,
2025-10-16T15:21:56,218         |           ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2025-10-16T15:21:56,218    1489 |                           std::__iterator_category(__first));
2025-10-16T15:21:56,218         |                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2025-10-16T15:21:56,218   /usr/include/c++/14/bits/stl_vector.h:1488:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2025-10-16T15:21:56,219   In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; <template-parameter-2-2> = void; _Tp = double; _Alloc = std::allocator<double>]’,
2025-10-16T15:21:56,219       inlined from ‘std::vector<double> Metadynamics::get_histogram(std::vector<double>&, int)’ at mamonca/cMC.cpp:853:19:
2025-10-16T15:21:56,220   /usr/include/c++/14/bits/stl_vector.h:1488:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2025-10-16T15:21:56,220    1488 |           _M_range_insert(begin() + __offset, __first, __last,
2025-10-16T15:21:56,220         |           ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2025-10-16T15:21:56,220    1489 |                           std::__iterator_category(__first));
2025-10-16T15:21:56,220         |                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2025-10-16T15:21:56,220   /usr/include/c++/14/bits/stl_vector.h:1488:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2025-10-16T15:22:08,071   /usr/local/lib/python3.13/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2025-10-16T15:22:08,071   !!

2025-10-16T15:22:08,071           ********************************************************************************
2025-10-16T15:22:08,072           Please avoid running ``setup.py`` directly.
2025-10-16T15:22:08,072           Instead, use pypa/build, pypa/installer or other
2025-10-16T15:22:08,072           standards-based tools.

2025-10-16T15:22:08,072           By 2025-Oct-31, you need to update your project and remove deprecated calls
2025-10-16T15:22:08,072           or your builds will no longer be supported.

2025-10-16T15:22:08,072           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2025-10-16T15:22:08,072           ********************************************************************************

2025-10-16T15:22:08,073   !!
2025-10-16T15:22:08,073     self.initialize_options()
2025-10-16T15:22:09,004   Building wheel for mamonca (setup.py): finished with status 'done'
2025-10-16T15:22:09,012   Created wheel for mamonca: filename=mamonca-0.0.5-cp313-cp313-linux_armv7l.whl size=651621 sha256=1e464b453e86bf74ccded4e5251fa78def6fba04e498ea2bee96f644e5669eb7
2025-10-16T15:22:09,013   Stored in directory: /tmp/pip-ephem-wheel-cache-g2i38y2p/wheels/08/f7/c7/fdb5eee476dfb647609d04e7c38530ff33c36c22f89bbedbc7
2025-10-16T15:22:09,020 Successfully built mamonca
2025-10-16T15:22:09,023 Removed build tracker: '/tmp/pip-build-tracker-834n32tp'