2025-10-21T06:06:36,722 Created temporary directory: /tmp/pip-ephem-wheel-cache-4tigkdtk 2025-10-21T06:06:36,724 Created temporary directory: /tmp/pip-build-tracker-i2b6lupn 2025-10-21T06:06:36,724 Initialized build tracking at /tmp/pip-build-tracker-i2b6lupn 2025-10-21T06:06:36,725 Created build tracker: /tmp/pip-build-tracker-i2b6lupn 2025-10-21T06:06:36,725 Entered build tracker: /tmp/pip-build-tracker-i2b6lupn 2025-10-21T06:06:36,726 Created temporary directory: /tmp/pip-wheel-x9kbyoqd 2025-10-21T06:06:36,729 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2025-10-21T06:06:36,732 Created temporary directory: /tmp/pip-ephem-wheel-cache-vap27h14 2025-10-21T06:06:36,754 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-10-21T06:06:36,758 2 location(s) to search for versions of aind-anatomical-utils: 2025-10-21T06:06:36,758 * https://pypi.org/simple/aind-anatomical-utils/ 2025-10-21T06:06:36,758 * https://www.piwheels.org/simple/aind-anatomical-utils/ 2025-10-21T06:06:36,759 Fetching project page and analyzing links: https://pypi.org/simple/aind-anatomical-utils/ 2025-10-21T06:06:36,760 Getting page https://pypi.org/simple/aind-anatomical-utils/ 2025-10-21T06:06:36,761 Found index url https://pypi.org/simple 2025-10-21T06:06:36,978 Fetched page https://pypi.org/simple/aind-anatomical-utils/ as application/vnd.pypi.simple.v1+json 2025-10-21T06:06:36,986 Skipping link: No binaries permitted for aind-anatomical-utils: https://files.pythonhosted.org/packages/a5/30/3547093c613ec579bff7065abfe725763e08e6e1caff4fde717689dedf8d/aind_anatomical_utils-0.0.1-py3-none-any.whl (from https://pypi.org/simple/aind-anatomical-utils/) (requires-python:>=3.9) 2025-10-21T06:06:36,987 Found link https://files.pythonhosted.org/packages/65/d9/74261be02b04fc34ddd49ffbe9739692a1ff7f654c3773bdcef53cbcc81c/aind_anatomical_utils-0.0.1.tar.gz (from https://pypi.org/simple/aind-anatomical-utils/) (requires-python:>=3.9), version: 0.0.1 2025-10-21T06:06:36,988 Skipping link: No binaries permitted for aind-anatomical-utils: https://files.pythonhosted.org/packages/29/96/cc10108f3d7da77dd2c1b25ebf4ddbe5931581d8cafb39e4f65dea352b8b/aind_anatomical_utils-0.0.2-py3-none-any.whl (from https://pypi.org/simple/aind-anatomical-utils/) (requires-python:>=3.9) 2025-10-21T06:06:36,990 Found link https://files.pythonhosted.org/packages/3f/ed/cccc2d384e490beb0d7e05f98cab968e89a089267477ac7ffc2a50a4efe8/aind_anatomical_utils-0.0.2.tar.gz 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2025-10-21T06:06:36,995 Found link https://files.pythonhosted.org/packages/0e/11/b82e648ed8671d8b12982a75a48fd27ba5dcc301172bb67765f8c73814e3/aind_anatomical_utils-0.1.0.tar.gz (from https://pypi.org/simple/aind-anatomical-utils/) (requires-python:>=3.9), version: 0.1.0 2025-10-21T06:06:36,996 Skipping link: No binaries permitted for aind-anatomical-utils: https://files.pythonhosted.org/packages/14/2b/e498ff777ffa1a3ef9450ccf85f174b9441c35334593c31102f4d28975ba/aind_anatomical_utils-0.1.1-py3-none-any.whl (from https://pypi.org/simple/aind-anatomical-utils/) (requires-python:>=3.9) 2025-10-21T06:06:36,997 Found link https://files.pythonhosted.org/packages/91/d0/e82350214d5902803313752e497a0d85f67cfee8d7a8300528df1695a638/aind_anatomical_utils-0.1.1.tar.gz (from https://pypi.org/simple/aind-anatomical-utils/) (requires-python:>=3.9), version: 0.1.1 2025-10-21T06:06:36,998 Skipping link: No binaries permitted for aind-anatomical-utils: 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2025-10-21T06:06:37,006 Found link https://files.pythonhosted.org/packages/0c/77/354b30e547577e733a29ed09e6598129f029de31d776ecf30db4ad0b7c39/aind_anatomical_utils-0.4.0.tar.gz (from https://pypi.org/simple/aind-anatomical-utils/) (requires-python:>=3.9), version: 0.4.0 2025-10-21T06:06:37,007 Skipping link: No binaries permitted for aind-anatomical-utils: https://files.pythonhosted.org/packages/cc/e4/b13e72a8118470e8866d2cd3e89e7b563174b49d404055f1eacbd42b5f28/aind_anatomical_utils-0.4.1-py3-none-any.whl (from https://pypi.org/simple/aind-anatomical-utils/) (requires-python:>=3.9) 2025-10-21T06:06:37,008 Found link https://files.pythonhosted.org/packages/dc/99/286bc7df6ed5420fd5b7866f51ba8f57f008f829235728e37f89f8d58e01/aind_anatomical_utils-0.4.1.tar.gz (from https://pypi.org/simple/aind-anatomical-utils/) (requires-python:>=3.9), version: 0.4.1 2025-10-21T06:06:37,009 Fetching project page and analyzing links: https://www.piwheels.org/simple/aind-anatomical-utils/ 2025-10-21T06:06:37,010 Getting page https://www.piwheels.org/simple/aind-anatomical-utils/ 2025-10-21T06:06:37,012 Found index url https://www.piwheels.org/simple 2025-10-21T06:06:37,195 Fetched page https://www.piwheels.org/simple/aind-anatomical-utils/ as text/html 2025-10-21T06:06:37,199 Skipping link: No binaries permitted for aind-anatomical-utils: https://www.piwheels.org/simple/aind-anatomical-utils/aind_anatomical_utils-0.4.0-py3-none-any.whl#sha256=784a6f75ff2e5f3259f6b2b698f83b20f6139d4e14e8f0e9c2887110c43180c0 (from https://www.piwheels.org/simple/aind-anatomical-utils/) (requires-python:>=3.9) 2025-10-21T06:06:37,199 Skipping link: No binaries permitted for aind-anatomical-utils: https://www.piwheels.org/simple/aind-anatomical-utils/aind_anatomical_utils-0.3.1-py3-none-any.whl#sha256=b2e38c5cfad9ddc58e012ac376d819fd577e3720ab6ab5699830275175949c4f (from https://www.piwheels.org/simple/aind-anatomical-utils/) (requires-python:>=3.9) 2025-10-21T06:06:37,200 Skipping link: No 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https://www.piwheels.org/simple/aind-anatomical-utils/) (requires-python:>=3.9) 2025-10-21T06:06:37,204 Skipping link: No binaries permitted for aind-anatomical-utils: https://archive1.piwheels.org/simple/aind-anatomical-utils/aind_anatomical_utils-0.0.1-py3-none-any.whl#sha256=a2acefc314e89e3ae8c6b96427bf27d11f26a516eed752567c31b2671a568cae (from https://www.piwheels.org/simple/aind-anatomical-utils/) (requires-python:>=3.9) 2025-10-21T06:06:37,204 Skipping link: not a file: https://www.piwheels.org/simple/aind-anatomical-utils/ 2025-10-21T06:06:37,205 Skipping link: not a file: https://pypi.org/simple/aind-anatomical-utils/ 2025-10-21T06:06:37,225 Given no hashes to check 1 links for project 'aind-anatomical-utils': discarding no candidates 2025-10-21T06:06:37,242 Collecting aind-anatomical-utils==0.4.1 2025-10-21T06:06:37,245 Created temporary directory: /tmp/pip-unpack-_ohu352_ 2025-10-21T06:06:37,380 Downloading aind_anatomical_utils-0.4.1.tar.gz (38 kB) 2025-10-21T06:06:37,473 Added aind-anatomical-utils==0.4.1 from https://files.pythonhosted.org/packages/dc/99/286bc7df6ed5420fd5b7866f51ba8f57f008f829235728e37f89f8d58e01/aind_anatomical_utils-0.4.1.tar.gz to build tracker '/tmp/pip-build-tracker-i2b6lupn' 2025-10-21T06:06:37,480 Created temporary directory: /tmp/pip-build-env-v8_2lw6_ 2025-10-21T06:06:37,484 Installing build dependencies: started 2025-10-21T06:06:37,486 Running command pip subprocess to install build dependencies 2025-10-21T06:06:38,741 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2025-10-21T06:06:39,322 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2025-10-21T06:06:39,345 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-10-21T06:06:41,080 Collecting setuptools 2025-10-21T06:06:41,232 Using cached https://www.piwheels.org/simple/setuptools/setuptools-80.9.0-py3-none-any.whl (1.2 MB) 2025-10-21T06:06:47,117 Installing collected packages: setuptools 2025-10-21T06:07:00,058 Successfully installed setuptools-80.9.0 2025-10-21T06:07:00,326 Installing build dependencies: finished with status 'done' 2025-10-21T06:07:00,339 Getting requirements to build wheel: started 2025-10-21T06:07:00,340 Running command Getting requirements to build wheel 2025-10-21T06:07:02,969 running egg_info 2025-10-21T06:07:02,980 writing src/aind_anatomical_utils.egg-info/PKG-INFO 2025-10-21T06:07:02,984 writing dependency_links to src/aind_anatomical_utils.egg-info/dependency_links.txt 2025-10-21T06:07:02,987 writing requirements to src/aind_anatomical_utils.egg-info/requires.txt 2025-10-21T06:07:02,988 writing top-level names to src/aind_anatomical_utils.egg-info/top_level.txt 2025-10-21T06:07:03,021 reading manifest file 'src/aind_anatomical_utils.egg-info/SOURCES.txt' 2025-10-21T06:07:03,025 adding license file 'LICENSE' 2025-10-21T06:07:03,031 writing manifest file 'src/aind_anatomical_utils.egg-info/SOURCES.txt' 2025-10-21T06:07:03,129 Getting requirements to build wheel: finished with status 'done' 2025-10-21T06:07:03,132 Created temporary directory: /tmp/pip-modern-metadata-7b98qv6y 2025-10-21T06:07:03,134 Preparing metadata (pyproject.toml): started 2025-10-21T06:07:03,136 Running command Preparing metadata (pyproject.toml) 2025-10-21T06:07:04,996 running dist_info 2025-10-21T06:07:05,008 creating /tmp/pip-modern-metadata-7b98qv6y/aind_anatomical_utils.egg-info 2025-10-21T06:07:05,009 writing /tmp/pip-modern-metadata-7b98qv6y/aind_anatomical_utils.egg-info/PKG-INFO 2025-10-21T06:07:05,013 writing dependency_links to /tmp/pip-modern-metadata-7b98qv6y/aind_anatomical_utils.egg-info/dependency_links.txt 2025-10-21T06:07:05,015 writing requirements to /tmp/pip-modern-metadata-7b98qv6y/aind_anatomical_utils.egg-info/requires.txt 2025-10-21T06:07:05,016 writing top-level names to /tmp/pip-modern-metadata-7b98qv6y/aind_anatomical_utils.egg-info/top_level.txt 2025-10-21T06:07:05,018 writing manifest file '/tmp/pip-modern-metadata-7b98qv6y/aind_anatomical_utils.egg-info/SOURCES.txt' 2025-10-21T06:07:05,038 reading manifest file '/tmp/pip-modern-metadata-7b98qv6y/aind_anatomical_utils.egg-info/SOURCES.txt' 2025-10-21T06:07:05,040 adding license file 'LICENSE' 2025-10-21T06:07:05,043 writing manifest file '/tmp/pip-modern-metadata-7b98qv6y/aind_anatomical_utils.egg-info/SOURCES.txt' 2025-10-21T06:07:05,044 creating '/tmp/pip-modern-metadata-7b98qv6y/aind_anatomical_utils-0.4.1.dist-info' 2025-10-21T06:07:05,194 Preparing metadata (pyproject.toml): finished with status 'done' 2025-10-21T06:07:05,199 Source in /tmp/pip-wheel-x9kbyoqd/aind-anatomical-utils_be30c9f0755e4fd3b09eee398735b673 has version 0.4.1, which satisfies requirement aind-anatomical-utils==0.4.1 from https://files.pythonhosted.org/packages/dc/99/286bc7df6ed5420fd5b7866f51ba8f57f008f829235728e37f89f8d58e01/aind_anatomical_utils-0.4.1.tar.gz 2025-10-21T06:07:05,200 Removed aind-anatomical-utils==0.4.1 from https://files.pythonhosted.org/packages/dc/99/286bc7df6ed5420fd5b7866f51ba8f57f008f829235728e37f89f8d58e01/aind_anatomical_utils-0.4.1.tar.gz from build tracker '/tmp/pip-build-tracker-i2b6lupn' 2025-10-21T06:07:05,206 Created temporary directory: /tmp/pip-unpack-5nin136v 2025-10-21T06:07:05,207 Building wheels for collected packages: aind-anatomical-utils 2025-10-21T06:07:05,212 Created temporary directory: /tmp/pip-wheel-cef8_6oz 2025-10-21T06:07:05,212 Destination directory: /tmp/pip-wheel-cef8_6oz 2025-10-21T06:07:05,214 Building wheel for aind-anatomical-utils (pyproject.toml): started 2025-10-21T06:07:05,215 Running command Building wheel for aind-anatomical-utils (pyproject.toml) 2025-10-21T06:07:06,839 running bdist_wheel 2025-10-21T06:07:07,738 running build 2025-10-21T06:07:07,739 running build_py 2025-10-21T06:07:07,754 creating build/lib/aind_anatomical_utils 2025-10-21T06:07:07,757 copying src/aind_anatomical_utils/coordinate_systems.py -> build/lib/aind_anatomical_utils 2025-10-21T06:07:07,761 copying src/aind_anatomical_utils/utils.py -> build/lib/aind_anatomical_utils 2025-10-21T06:07:07,765 copying src/aind_anatomical_utils/anatomical_volume.py -> build/lib/aind_anatomical_utils 2025-10-21T06:07:07,769 copying src/aind_anatomical_utils/slicer.py -> build/lib/aind_anatomical_utils 2025-10-21T06:07:07,774 copying src/aind_anatomical_utils/__init__.py -> build/lib/aind_anatomical_utils 2025-10-21T06:07:07,777 copying src/aind_anatomical_utils/ants_volume.py -> build/lib/aind_anatomical_utils 2025-10-21T06:07:07,780 copying src/aind_anatomical_utils/sitk_volume.py -> build/lib/aind_anatomical_utils 2025-10-21T06:07:07,783 running egg_info 2025-10-21T06:07:07,808 writing src/aind_anatomical_utils.egg-info/PKG-INFO 2025-10-21T06:07:07,814 writing dependency_links to src/aind_anatomical_utils.egg-info/dependency_links.txt 2025-10-21T06:07:07,816 writing requirements to src/aind_anatomical_utils.egg-info/requires.txt 2025-10-21T06:07:07,818 writing top-level names to src/aind_anatomical_utils.egg-info/top_level.txt 2025-10-21T06:07:07,834 reading manifest file 'src/aind_anatomical_utils.egg-info/SOURCES.txt' 2025-10-21T06:07:07,836 adding license file 'LICENSE' 2025-10-21T06:07:07,840 writing manifest file 'src/aind_anatomical_utils.egg-info/SOURCES.txt' 2025-10-21T06:07:07,843 copying src/aind_anatomical_utils/py.typed -> build/lib/aind_anatomical_utils 2025-10-21T06:07:07,855 installing to build/bdist.linux-armv7l/wheel 2025-10-21T06:07:07,856 running install 2025-10-21T06:07:07,879 running install_lib 2025-10-21T06:07:07,887 creating build/bdist.linux-armv7l/wheel 2025-10-21T06:07:07,893 creating build/bdist.linux-armv7l/wheel/aind_anatomical_utils 2025-10-21T06:07:07,896 copying build/lib/aind_anatomical_utils/coordinate_systems.py -> build/bdist.linux-armv7l/wheel/./aind_anatomical_utils 2025-10-21T06:07:07,903 copying build/lib/aind_anatomical_utils/utils.py -> build/bdist.linux-armv7l/wheel/./aind_anatomical_utils 2025-10-21T06:07:07,907 copying build/lib/aind_anatomical_utils/py.typed -> build/bdist.linux-armv7l/wheel/./aind_anatomical_utils 2025-10-21T06:07:07,910 copying build/lib/aind_anatomical_utils/anatomical_volume.py -> build/bdist.linux-armv7l/wheel/./aind_anatomical_utils 2025-10-21T06:07:07,915 copying build/lib/aind_anatomical_utils/slicer.py -> build/bdist.linux-armv7l/wheel/./aind_anatomical_utils 2025-10-21T06:07:08,137 copying build/lib/aind_anatomical_utils/__init__.py -> build/bdist.linux-armv7l/wheel/./aind_anatomical_utils 2025-10-21T06:07:08,141 copying build/lib/aind_anatomical_utils/ants_volume.py -> build/bdist.linux-armv7l/wheel/./aind_anatomical_utils 2025-10-21T06:07:08,146 copying build/lib/aind_anatomical_utils/sitk_volume.py -> build/bdist.linux-armv7l/wheel/./aind_anatomical_utils 2025-10-21T06:07:08,150 running install_egg_info 2025-10-21T06:07:08,190 Copying src/aind_anatomical_utils.egg-info to build/bdist.linux-armv7l/wheel/./aind_anatomical_utils-0.4.1-py3.11.egg-info 2025-10-21T06:07:08,423 running install_scripts 2025-10-21T06:07:08,436 creating build/bdist.linux-armv7l/wheel/aind_anatomical_utils-0.4.1.dist-info/WHEEL 2025-10-21T06:07:08,439 creating '/tmp/pip-wheel-cef8_6oz/.tmp-xmqcjff6/aind_anatomical_utils-0.4.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-10-21T06:07:08,441 adding 'aind_anatomical_utils/__init__.py' 2025-10-21T06:07:08,444 adding 'aind_anatomical_utils/anatomical_volume.py' 2025-10-21T06:07:08,445 adding 'aind_anatomical_utils/ants_volume.py' 2025-10-21T06:07:08,447 adding 'aind_anatomical_utils/coordinate_systems.py' 2025-10-21T06:07:08,449 adding 'aind_anatomical_utils/py.typed' 2025-10-21T06:07:08,451 adding 'aind_anatomical_utils/sitk_volume.py' 2025-10-21T06:07:08,454 adding 'aind_anatomical_utils/slicer.py' 2025-10-21T06:07:08,456 adding 'aind_anatomical_utils/utils.py' 2025-10-21T06:07:08,461 adding 'aind_anatomical_utils-0.4.1.dist-info/licenses/LICENSE' 2025-10-21T06:07:08,464 adding 'aind_anatomical_utils-0.4.1.dist-info/METADATA' 2025-10-21T06:07:08,467 adding 'aind_anatomical_utils-0.4.1.dist-info/WHEEL' 2025-10-21T06:07:08,470 adding 'aind_anatomical_utils-0.4.1.dist-info/top_level.txt' 2025-10-21T06:07:08,471 adding 'aind_anatomical_utils-0.4.1.dist-info/RECORD' 2025-10-21T06:07:08,476 removing build/bdist.linux-armv7l/wheel 2025-10-21T06:07:08,605 Building wheel for aind-anatomical-utils (pyproject.toml): finished with status 'done' 2025-10-21T06:07:08,620 Created wheel for aind-anatomical-utils: filename=aind_anatomical_utils-0.4.1-py3-none-any.whl size=19060 sha256=acfd2e7402fb18d40cc2d0fd21d5b5cb6755dda35c5a470d58ea093ab96b8a47 2025-10-21T06:07:08,622 Stored in directory: /tmp/pip-ephem-wheel-cache-vap27h14/wheels/99/43/f7/8f12f06a0fd1721ae9c8a04f7b16991e5b0be77d57f26e316c 2025-10-21T06:07:08,642 Successfully built aind-anatomical-utils 2025-10-21T06:07:08,647 Removed build tracker: '/tmp/pip-build-tracker-i2b6lupn'