2025-10-24T04:27:26,354 Created temporary directory: /tmp/pip-ephem-wheel-cache-zrst8gs7
2025-10-24T04:27:26,356 Created temporary directory: /tmp/pip-build-tracker-uqm03mid
2025-10-24T04:27:26,357 Initialized build tracking at /tmp/pip-build-tracker-uqm03mid
2025-10-24T04:27:26,357 Created build tracker: /tmp/pip-build-tracker-uqm03mid
2025-10-24T04:27:26,358 Entered build tracker: /tmp/pip-build-tracker-uqm03mid
2025-10-24T04:27:26,358 Created temporary directory: /tmp/pip-wheel-dj3lzuse
2025-10-24T04:27:26,361 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2025-10-24T04:27:26,364 Created temporary directory: /tmp/pip-ephem-wheel-cache-7u7flst_
2025-10-24T04:27:26,386 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2025-10-24T04:27:26,389 2 location(s) to search for versions of eremitalpa:
2025-10-24T04:27:26,389 * https://pypi.org/simple/eremitalpa/
2025-10-24T04:27:26,389 * https://www.piwheels.org/simple/eremitalpa/
2025-10-24T04:27:26,390 Fetching project page and analyzing links: https://pypi.org/simple/eremitalpa/
2025-10-24T04:27:26,391 Getting page https://pypi.org/simple/eremitalpa/
2025-10-24T04:27:26,392 Found index url https://pypi.org/simple
2025-10-24T04:27:26,529 Fetched page https://pypi.org/simple/eremitalpa/ as application/vnd.pypi.simple.v1+json
2025-10-24T04:27:26,533   Skipping link: No binaries permitted for eremitalpa: https://files.pythonhosted.org/packages/63/67/a38eb6928cc9914faf40ef6f7bcc9954a3569adc23d6d26a6b58e0198ccc/eremitalpa-1.1.5-py3-none-any.whl (from https://pypi.org/simple/eremitalpa/)
2025-10-24T04:27:26,533   Found link https://files.pythonhosted.org/packages/75/9f/0b44e34e579ffebe9649d0a94dd7c4f295bd79c989c06f14383f5ec680c6/eremitalpa-1.1.5.tar.gz (from https://pypi.org/simple/eremitalpa/), version: 1.1.5
2025-10-24T04:27:26,534   Skipping link: No binaries permitted for eremitalpa: https://files.pythonhosted.org/packages/bd/08/7c47ba724cf69891c6dda704e9b5a9772c7581490ba2bfbd36b282de6671/eremitalpa-1.1.6-py3-none-any.whl (from https://pypi.org/simple/eremitalpa/)
2025-10-24T04:27:26,535   Found link https://files.pythonhosted.org/packages/b7/d3/aa97066c64d282141c2918bf1d9be8031b6e0530ad3ef5bb9aeeeb589853/eremitalpa-1.1.6.tar.gz (from https://pypi.org/simple/eremitalpa/), version: 1.1.6
2025-10-24T04:27:26,535   Skipping link: No binaries permitted for eremitalpa: https://files.pythonhosted.org/packages/fe/76/60990b49b247d1ec489a7850ad08b808798c0ac3c85b1aa495eac507c59b/eremitalpa-1.1.8-py3-none-any.whl (from https://pypi.org/simple/eremitalpa/)
2025-10-24T04:27:26,536   Found link https://files.pythonhosted.org/packages/11/e1/92977f914761c587eb475883138c1648ece0b90fd52ddd7df03d9e4b548b/eremitalpa-1.1.8.tar.gz (from https://pypi.org/simple/eremitalpa/), version: 1.1.8
2025-10-24T04:27:26,537   Skipping link: No binaries permitted for eremitalpa: https://files.pythonhosted.org/packages/60/00/619e552f089774e8f2a08dcfc85b3aec5f2bb301b13f6d0f047a170e0503/eremitalpa-1.1.9-py3-none-any.whl (from https://pypi.org/simple/eremitalpa/)
2025-10-24T04:27:26,537   Found link https://files.pythonhosted.org/packages/b3/a2/dc822181ff62155f5e956459fa2921ad11ece0d02a589158d3fc6efa7fe5/eremitalpa-1.1.9.tar.gz (from https://pypi.org/simple/eremitalpa/), version: 1.1.9
2025-10-24T04:27:26,538   Skipping link: No binaries permitted for eremitalpa: https://files.pythonhosted.org/packages/9f/11/c87a29384d71f03d70570230839fe2fa0dff90148263207442092b5dfa3d/eremitalpa-1.1.10-py3-none-any.whl (from https://pypi.org/simple/eremitalpa/)
2025-10-24T04:27:26,539   Found link https://files.pythonhosted.org/packages/c6/eb/9f1ba876eb56618e4ed52f18382c12b703132c060774768092594259e813/eremitalpa-1.1.10.tar.gz (from https://pypi.org/simple/eremitalpa/), version: 1.1.10
2025-10-24T04:27:26,539   Skipping link: No binaries permitted for eremitalpa: https://files.pythonhosted.org/packages/c7/d8/62c6187677ad03433b791178ab8c9ba8bdf8e06299922923fba1063e4d49/eremitalpa-1.1.12-py3-none-any.whl (from https://pypi.org/simple/eremitalpa/)
2025-10-24T04:27:26,540   Found link https://files.pythonhosted.org/packages/bb/2f/8a112e7d3a3a7ec77bf692da13d2ac6168f3cc071ae84be87a05a3ecae8a/eremitalpa-1.1.12.tar.gz (from https://pypi.org/simple/eremitalpa/), version: 1.1.12
2025-10-24T04:27:26,541   Skipping link: No binaries permitted for eremitalpa: https://files.pythonhosted.org/packages/54/9d/d0db064ef86ae8fd820dd1b6dbd7790ac6cafaf896654839bd0a860eca76/eremitalpa-1.1.13-py3-none-any.whl (from https://pypi.org/simple/eremitalpa/)
2025-10-24T04:27:26,541   Found link https://files.pythonhosted.org/packages/3c/cb/0702e46b91d6c0eee3982457ded8889ec76fbfed12faf2fa26e8e260e709/eremitalpa-1.1.13.tar.gz (from https://pypi.org/simple/eremitalpa/), version: 1.1.13
2025-10-24T04:27:26,542   Skipping link: No binaries permitted for eremitalpa: https://files.pythonhosted.org/packages/f4/02/f57046e3fc89612b490385971c97361189666441b646051c6e5375ebaa4b/eremitalpa-1.1.14-py3-none-any.whl (from https://pypi.org/simple/eremitalpa/)
2025-10-24T04:27:26,543 Fetching project page and analyzing links: https://www.piwheels.org/simple/eremitalpa/
2025-10-24T04:27:26,544 Getting page https://www.piwheels.org/simple/eremitalpa/
2025-10-24T04:27:26,545 Found index url https://www.piwheels.org/simple
2025-10-24T04:27:26,702 Fetched page https://www.piwheels.org/simple/eremitalpa/ as text/html
2025-10-24T04:27:26,704   Skipping link: No binaries permitted for eremitalpa: https://www.piwheels.org/simple/eremitalpa/eremitalpa-1.1.12-py3-none-any.whl#sha256=fe1400094b1c39baae268b99ac647ee37959b9b8d72f62933d224bd97eff6166 (from https://www.piwheels.org/simple/eremitalpa/)
2025-10-24T04:27:26,705   Skipping link: No binaries permitted for eremitalpa: https://www.piwheels.org/simple/eremitalpa/eremitalpa-1.1.10-py3-none-any.whl#sha256=28fa61f2612b27a71b4fee4fde340c41060bff027e2c1999529bf7ff61420098 (from https://www.piwheels.org/simple/eremitalpa/)
2025-10-24T04:27:26,706   Skipping link: No binaries permitted for eremitalpa: https://www.piwheels.org/simple/eremitalpa/eremitalpa-1.1.9-py3-none-any.whl#sha256=0a1faa1096a0b30883fe018277c30903679656afaf8b8369e994844e46777d38 (from https://www.piwheels.org/simple/eremitalpa/)
2025-10-24T04:27:26,706   Skipping link: No binaries permitted for eremitalpa: https://archive1.piwheels.org/simple/eremitalpa/eremitalpa-1.1.8-py3-none-any.whl#sha256=af0c0758f68d9ca781bfbaa4a372a9673026f1034bf620e705ca390d2aa5bfd6 (from https://www.piwheels.org/simple/eremitalpa/)
2025-10-24T04:27:26,707 Skipping link: not a file: https://www.piwheels.org/simple/eremitalpa/
2025-10-24T04:27:26,708 Skipping link: not a file: https://pypi.org/simple/eremitalpa/
2025-10-24T04:27:26,727 Given no hashes to check 1 links for project 'eremitalpa': discarding no candidates
2025-10-24T04:27:26,745 Collecting eremitalpa==1.1.13
2025-10-24T04:27:26,748   Created temporary directory: /tmp/pip-unpack-ae7bhyyc
2025-10-24T04:27:26,882   Downloading eremitalpa-1.1.13.tar.gz (60 kB)
2025-10-24T04:27:27,029   Added eremitalpa==1.1.13 from https://files.pythonhosted.org/packages/3c/cb/0702e46b91d6c0eee3982457ded8889ec76fbfed12faf2fa26e8e260e709/eremitalpa-1.1.13.tar.gz to build tracker '/tmp/pip-build-tracker-uqm03mid'
2025-10-24T04:27:27,035   Created temporary directory: /tmp/pip-build-env-l054tprd
2025-10-24T04:27:27,040   Installing build dependencies: started
2025-10-24T04:27:27,041   Running command pip subprocess to install build dependencies
2025-10-24T04:27:28,180   Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11)
2025-10-24T04:27:28,755   DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2025-10-24T04:27:28,779   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2025-10-24T04:27:30,468   Collecting setuptools>=77.0.3
2025-10-24T04:27:30,554     Using cached https://www.piwheels.org/simple/setuptools/setuptools-80.9.0-py3-none-any.whl (1.2 MB)
2025-10-24T04:27:30,925   Collecting setuptools-scm>=8
2025-10-24T04:27:30,943     Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-9.2.2-py3-none-any.whl (62 kB)
2025-10-24T04:27:31,131   Collecting packaging>=20
2025-10-24T04:27:31,149     Using cached https://www.piwheels.org/simple/packaging/packaging-25.0-py3-none-any.whl (66 kB)
2025-10-24T04:27:34,035   Installing collected packages: setuptools, packaging, setuptools-scm
2025-10-24T04:27:38,299     Creating /tmp/pip-build-env-l054tprd/overlay/local/bin
2025-10-24T04:27:38,302     changing mode of /tmp/pip-build-env-l054tprd/overlay/local/bin/setuptools-scm to 755
2025-10-24T04:27:38,327   Successfully installed packaging-25.0 setuptools-80.9.0 setuptools-scm-9.2.2
2025-10-24T04:27:38,612   Installing build dependencies: finished with status 'done'
2025-10-24T04:27:38,620   Getting requirements to build wheel: started
2025-10-24T04:27:38,621   Running command Getting requirements to build wheel
2025-10-24T04:27:39,409   running egg_info
2025-10-24T04:27:39,417   writing eremitalpa.egg-info/PKG-INFO
2025-10-24T04:27:39,422   writing dependency_links to eremitalpa.egg-info/dependency_links.txt
2025-10-24T04:27:39,424   writing entry points to eremitalpa.egg-info/entry_points.txt
2025-10-24T04:27:39,427   writing requirements to eremitalpa.egg-info/requires.txt
2025-10-24T04:27:39,428   writing top-level names to eremitalpa.egg-info/top_level.txt
2025-10-24T04:27:39,483   listing git files failed - pretending there aren't any
2025-10-24T04:27:39,487   reading manifest file 'eremitalpa.egg-info/SOURCES.txt'
2025-10-24T04:27:39,492   reading manifest template 'MANIFEST.in'
2025-10-24T04:27:39,498   writing manifest file 'eremitalpa.egg-info/SOURCES.txt'
2025-10-24T04:27:39,602   Getting requirements to build wheel: finished with status 'done'
2025-10-24T04:27:39,605   Created temporary directory: /tmp/pip-modern-metadata-fu7bp2ft
2025-10-24T04:27:39,607   Preparing metadata (pyproject.toml): started
2025-10-24T04:27:39,609   Running command Preparing metadata (pyproject.toml)
2025-10-24T04:27:40,328   running dist_info
2025-10-24T04:27:40,343   creating /tmp/pip-modern-metadata-fu7bp2ft/eremitalpa.egg-info
2025-10-24T04:27:40,344   writing /tmp/pip-modern-metadata-fu7bp2ft/eremitalpa.egg-info/PKG-INFO
2025-10-24T04:27:40,349   writing dependency_links to /tmp/pip-modern-metadata-fu7bp2ft/eremitalpa.egg-info/dependency_links.txt
2025-10-24T04:27:40,351   writing entry points to /tmp/pip-modern-metadata-fu7bp2ft/eremitalpa.egg-info/entry_points.txt
2025-10-24T04:27:40,354   writing requirements to /tmp/pip-modern-metadata-fu7bp2ft/eremitalpa.egg-info/requires.txt
2025-10-24T04:27:40,566   writing top-level names to /tmp/pip-modern-metadata-fu7bp2ft/eremitalpa.egg-info/top_level.txt
2025-10-24T04:27:40,568   writing manifest file '/tmp/pip-modern-metadata-fu7bp2ft/eremitalpa.egg-info/SOURCES.txt'
2025-10-24T04:27:40,620   listing git files failed - pretending there aren't any
2025-10-24T04:27:40,624   reading manifest file '/tmp/pip-modern-metadata-fu7bp2ft/eremitalpa.egg-info/SOURCES.txt'
2025-10-24T04:27:40,627   reading manifest template 'MANIFEST.in'
2025-10-24T04:27:40,632   writing manifest file '/tmp/pip-modern-metadata-fu7bp2ft/eremitalpa.egg-info/SOURCES.txt'
2025-10-24T04:27:40,633   creating '/tmp/pip-modern-metadata-fu7bp2ft/eremitalpa-1.1.13.dist-info'
2025-10-24T04:27:40,762   Preparing metadata (pyproject.toml): finished with status 'done'
2025-10-24T04:27:40,766   Source in /tmp/pip-wheel-dj3lzuse/eremitalpa_baaf979376a3463a931ef06675e83c5e has version 1.1.13, which satisfies requirement eremitalpa==1.1.13 from https://files.pythonhosted.org/packages/3c/cb/0702e46b91d6c0eee3982457ded8889ec76fbfed12faf2fa26e8e260e709/eremitalpa-1.1.13.tar.gz
2025-10-24T04:27:40,767   Removed eremitalpa==1.1.13 from https://files.pythonhosted.org/packages/3c/cb/0702e46b91d6c0eee3982457ded8889ec76fbfed12faf2fa26e8e260e709/eremitalpa-1.1.13.tar.gz from build tracker '/tmp/pip-build-tracker-uqm03mid'
2025-10-24T04:27:40,772 Created temporary directory: /tmp/pip-unpack-354kkuu7
2025-10-24T04:27:40,772 Building wheels for collected packages: eremitalpa
2025-10-24T04:27:40,777   Created temporary directory: /tmp/pip-wheel-qmindl74
2025-10-24T04:27:40,777   Destination directory: /tmp/pip-wheel-qmindl74
2025-10-24T04:27:40,779   Building wheel for eremitalpa (pyproject.toml): started
2025-10-24T04:27:40,780   Running command Building wheel for eremitalpa (pyproject.toml)
2025-10-24T04:27:41,472   running bdist_wheel
2025-10-24T04:27:41,498   running build
2025-10-24T04:27:41,498   running build_py
2025-10-24T04:27:41,507   creating build/lib/test
2025-10-24T04:27:41,509   copying test/test_eremitalpa.py -> build/lib/test
2025-10-24T04:27:41,511   copying test/test_bio.py -> build/lib/test
2025-10-24T04:27:41,514   copying test/test_lib.py -> build/lib/test
2025-10-24T04:27:41,515   copying test/test_influenza.py -> build/lib/test
2025-10-24T04:27:41,518   creating build/lib/eremitalpa
2025-10-24T04:27:41,519   copying eremitalpa/spread_points.py -> build/lib/eremitalpa
2025-10-24T04:27:41,521   copying eremitalpa/eremitalpa.py -> build/lib/eremitalpa
2025-10-24T04:27:41,524   copying eremitalpa/bio.py -> build/lib/eremitalpa
2025-10-24T04:27:41,527   copying eremitalpa/lib.py -> build/lib/eremitalpa
2025-10-24T04:27:41,529   copying eremitalpa/__init__.py -> build/lib/eremitalpa
2025-10-24T04:27:41,531   copying eremitalpa/flu_wider.py -> build/lib/eremitalpa
2025-10-24T04:27:41,533   copying eremitalpa/influenza.py -> build/lib/eremitalpa
2025-10-24T04:27:41,537   creating build/lib/eremitalpa/scripts
2025-10-24T04:27:41,538   copying eremitalpa/scripts/plot_labelled_phylogeny.py -> build/lib/eremitalpa/scripts
2025-10-24T04:27:41,541   copying eremitalpa/scripts/print_phylogeny_leaves.py -> build/lib/eremitalpa/scripts
2025-10-24T04:27:41,542   copying eremitalpa/scripts/make_chimera.py -> build/lib/eremitalpa/scripts
2025-10-24T04:27:41,544   copying eremitalpa/scripts/align_to_reference.py -> build/lib/eremitalpa/scripts
2025-10-24T04:27:41,546   copying eremitalpa/scripts/__init__.py -> build/lib/eremitalpa/scripts
2025-10-24T04:27:41,548   copying eremitalpa/scripts/write_iqtree_ancestral_seqs.py -> build/lib/eremitalpa/scripts
2025-10-24T04:27:41,550   copying eremitalpa/scripts/influenza_cluster_color_palette.py -> build/lib/eremitalpa/scripts
2025-10-24T04:27:41,551   copying eremitalpa/scripts/filter_similar_hd.py -> build/lib/eremitalpa/scripts
2025-10-24T04:27:41,553   copying eremitalpa/scripts/revcomp_match.py -> build/lib/eremitalpa/scripts
2025-10-24T04:27:41,555   copying eremitalpa/scripts/convert_seq.py -> build/lib/eremitalpa/scripts
2025-10-24T04:27:41,556   running egg_info
2025-10-24T04:27:41,570   writing eremitalpa.egg-info/PKG-INFO
2025-10-24T04:27:41,574   writing dependency_links to eremitalpa.egg-info/dependency_links.txt
2025-10-24T04:27:41,576   writing entry points to eremitalpa.egg-info/entry_points.txt
2025-10-24T04:27:41,578   writing requirements to eremitalpa.egg-info/requires.txt
2025-10-24T04:27:41,579   writing top-level names to eremitalpa.egg-info/top_level.txt
2025-10-24T04:27:41,616   listing git files failed - pretending there aren't any
2025-10-24T04:27:41,620   reading manifest file 'eremitalpa.egg-info/SOURCES.txt'
2025-10-24T04:27:41,624   reading manifest template 'MANIFEST.in'
2025-10-24T04:27:41,630   writing manifest file 'eremitalpa.egg-info/SOURCES.txt'
2025-10-24T04:27:41,635   creating build/lib/data/flu
2025-10-24T04:27:41,637   copying data/flu/README.md -> build/lib/data/flu
2025-10-24T04:27:41,639   copying data/flu/cluster_cons.json -> build/lib/data/flu
2025-10-24T04:27:41,642   copying data/flu/flu-aa.fasta -> build/lib/data/flu
2025-10-24T04:27:41,645   creating build/lib/data/flu/a_tx37_2024
2025-10-24T04:27:41,645   copying data/flu/a_tx37_2024/HA.fasta -> build/lib/data/flu/a_tx37_2024
2025-10-24T04:27:41,648   copying data/flu/a_tx37_2024/MP.fasta -> build/lib/data/flu/a_tx37_2024
2025-10-24T04:27:41,650   copying data/flu/a_tx37_2024/NA.fasta -> build/lib/data/flu/a_tx37_2024
2025-10-24T04:27:41,652   copying data/flu/a_tx37_2024/NP.fasta -> build/lib/data/flu/a_tx37_2024
2025-10-24T04:27:41,654   copying data/flu/a_tx37_2024/NS.fasta -> build/lib/data/flu/a_tx37_2024
2025-10-24T04:27:41,656   copying data/flu/a_tx37_2024/PA.fasta -> build/lib/data/flu/a_tx37_2024
2025-10-24T04:27:41,659   copying data/flu/a_tx37_2024/PB1.fasta -> build/lib/data/flu/a_tx37_2024
2025-10-24T04:27:41,661   copying data/flu/a_tx37_2024/PB2.fasta -> build/lib/data/flu/a_tx37_2024
2025-10-24T04:27:41,663   creating build/lib/test/test_trees
2025-10-24T04:27:41,664   copying test/test_trees/a.tre -> build/lib/test/test_trees
2025-10-24T04:27:41,666   copying test/test_trees/b.tre -> build/lib/test/test_trees
2025-10-24T04:27:41,683   installing to build/bdist.linux-armv7l/wheel
2025-10-24T04:27:41,684   running install
2025-10-24T04:27:41,707   running install_lib
2025-10-24T04:27:41,715   creating build/bdist.linux-armv7l/wheel
2025-10-24T04:27:41,717   creating build/bdist.linux-armv7l/wheel/data
2025-10-24T04:27:41,718   creating build/bdist.linux-armv7l/wheel/data/flu
2025-10-24T04:27:41,719   copying build/lib/data/flu/README.md -> build/bdist.linux-armv7l/wheel/./data/flu
2025-10-24T04:27:41,721   copying build/lib/data/flu/cluster_cons.json -> build/bdist.linux-armv7l/wheel/./data/flu
2025-10-24T04:27:41,724   creating build/bdist.linux-armv7l/wheel/data/flu/a_tx37_2024
2025-10-24T04:27:41,725   copying build/lib/data/flu/a_tx37_2024/MP.fasta -> build/bdist.linux-armv7l/wheel/./data/flu/a_tx37_2024
2025-10-24T04:27:41,727   copying build/lib/data/flu/a_tx37_2024/PB1.fasta -> build/bdist.linux-armv7l/wheel/./data/flu/a_tx37_2024
2025-10-24T04:27:41,729   copying build/lib/data/flu/a_tx37_2024/PB2.fasta -> build/bdist.linux-armv7l/wheel/./data/flu/a_tx37_2024
2025-10-24T04:27:41,731   copying build/lib/data/flu/a_tx37_2024/PA.fasta -> build/bdist.linux-armv7l/wheel/./data/flu/a_tx37_2024
2025-10-24T04:27:41,733   copying build/lib/data/flu/a_tx37_2024/NA.fasta -> build/bdist.linux-armv7l/wheel/./data/flu/a_tx37_2024
2025-10-24T04:27:41,735   copying build/lib/data/flu/a_tx37_2024/NS.fasta -> build/bdist.linux-armv7l/wheel/./data/flu/a_tx37_2024
2025-10-24T04:27:41,737   copying build/lib/data/flu/a_tx37_2024/HA.fasta -> build/bdist.linux-armv7l/wheel/./data/flu/a_tx37_2024
2025-10-24T04:27:41,738   copying build/lib/data/flu/a_tx37_2024/NP.fasta -> build/bdist.linux-armv7l/wheel/./data/flu/a_tx37_2024
2025-10-24T04:27:41,740   copying build/lib/data/flu/flu-aa.fasta -> build/bdist.linux-armv7l/wheel/./data/flu
2025-10-24T04:27:41,743   creating build/bdist.linux-armv7l/wheel/test
2025-10-24T04:27:41,744   copying build/lib/test/test_eremitalpa.py -> build/bdist.linux-armv7l/wheel/./test
2025-10-24T04:27:41,746   copying build/lib/test/test_bio.py -> build/bdist.linux-armv7l/wheel/./test
2025-10-24T04:27:41,749   copying build/lib/test/test_lib.py -> build/bdist.linux-armv7l/wheel/./test
2025-10-24T04:27:41,751   copying build/lib/test/test_influenza.py -> build/bdist.linux-armv7l/wheel/./test
2025-10-24T04:27:41,754   creating build/bdist.linux-armv7l/wheel/test/test_trees
2025-10-24T04:27:41,755   copying build/lib/test/test_trees/b.tre -> build/bdist.linux-armv7l/wheel/./test/test_trees
2025-10-24T04:27:41,757   copying build/lib/test/test_trees/a.tre -> build/bdist.linux-armv7l/wheel/./test/test_trees
2025-10-24T04:27:41,759   creating build/bdist.linux-armv7l/wheel/eremitalpa
2025-10-24T04:27:41,760   copying build/lib/eremitalpa/spread_points.py -> build/bdist.linux-armv7l/wheel/./eremitalpa
2025-10-24T04:27:41,763   creating build/bdist.linux-armv7l/wheel/eremitalpa/scripts
2025-10-24T04:27:41,764   copying build/lib/eremitalpa/scripts/plot_labelled_phylogeny.py -> build/bdist.linux-armv7l/wheel/./eremitalpa/scripts
2025-10-24T04:27:41,766   copying build/lib/eremitalpa/scripts/print_phylogeny_leaves.py -> build/bdist.linux-armv7l/wheel/./eremitalpa/scripts
2025-10-24T04:27:41,768   copying build/lib/eremitalpa/scripts/make_chimera.py -> build/bdist.linux-armv7l/wheel/./eremitalpa/scripts
2025-10-24T04:27:41,769   copying build/lib/eremitalpa/scripts/align_to_reference.py -> build/bdist.linux-armv7l/wheel/./eremitalpa/scripts
2025-10-24T04:27:41,771   copying build/lib/eremitalpa/scripts/__init__.py -> build/bdist.linux-armv7l/wheel/./eremitalpa/scripts
2025-10-24T04:27:41,773   copying build/lib/eremitalpa/scripts/write_iqtree_ancestral_seqs.py -> build/bdist.linux-armv7l/wheel/./eremitalpa/scripts
2025-10-24T04:27:41,774   copying build/lib/eremitalpa/scripts/influenza_cluster_color_palette.py -> build/bdist.linux-armv7l/wheel/./eremitalpa/scripts
2025-10-24T04:27:41,776   copying build/lib/eremitalpa/scripts/filter_similar_hd.py -> build/bdist.linux-armv7l/wheel/./eremitalpa/scripts
2025-10-24T04:27:41,778   copying build/lib/eremitalpa/scripts/revcomp_match.py -> build/bdist.linux-armv7l/wheel/./eremitalpa/scripts
2025-10-24T04:27:41,780   copying build/lib/eremitalpa/scripts/convert_seq.py -> build/bdist.linux-armv7l/wheel/./eremitalpa/scripts
2025-10-24T04:27:41,782   copying build/lib/eremitalpa/eremitalpa.py -> build/bdist.linux-armv7l/wheel/./eremitalpa
2025-10-24T04:27:41,785   copying build/lib/eremitalpa/bio.py -> build/bdist.linux-armv7l/wheel/./eremitalpa
2025-10-24T04:27:41,788   copying build/lib/eremitalpa/lib.py -> build/bdist.linux-armv7l/wheel/./eremitalpa
2025-10-24T04:27:41,790   copying build/lib/eremitalpa/__init__.py -> build/bdist.linux-armv7l/wheel/./eremitalpa
2025-10-24T04:27:41,792   copying build/lib/eremitalpa/flu_wider.py -> build/bdist.linux-armv7l/wheel/./eremitalpa
2025-10-24T04:27:41,794   copying build/lib/eremitalpa/influenza.py -> build/bdist.linux-armv7l/wheel/./eremitalpa
2025-10-24T04:27:41,796   running install_egg_info
2025-10-24T04:27:41,803   Copying eremitalpa.egg-info to build/bdist.linux-armv7l/wheel/./eremitalpa-1.1.13-py3.11.egg-info
2025-10-24T04:27:41,815   running install_scripts
2025-10-24T04:27:41,823   creating build/bdist.linux-armv7l/wheel/eremitalpa-1.1.13.dist-info/WHEEL
2025-10-24T04:27:41,825   creating '/tmp/pip-wheel-qmindl74/.tmp-8unquk73/eremitalpa-1.1.13-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2025-10-24T04:27:41,828   adding 'data/flu/README.md'
2025-10-24T04:27:41,831   adding 'data/flu/cluster_cons.json'
2025-10-24T04:27:41,832   adding 'data/flu/flu-aa.fasta'
2025-10-24T04:27:41,834   adding 'data/flu/a_tx37_2024/HA.fasta'
2025-10-24T04:27:41,835   adding 'data/flu/a_tx37_2024/MP.fasta'
2025-10-24T04:27:41,837   adding 'data/flu/a_tx37_2024/NA.fasta'
2025-10-24T04:27:41,838   adding 'data/flu/a_tx37_2024/NP.fasta'
2025-10-24T04:27:41,840   adding 'data/flu/a_tx37_2024/NS.fasta'
2025-10-24T04:27:41,841   adding 'data/flu/a_tx37_2024/PA.fasta'
2025-10-24T04:27:41,843   adding 'data/flu/a_tx37_2024/PB1.fasta'
2025-10-24T04:27:41,844   adding 'data/flu/a_tx37_2024/PB2.fasta'
2025-10-24T04:27:41,846   adding 'eremitalpa/__init__.py'
2025-10-24T04:27:41,849   adding 'eremitalpa/bio.py'
2025-10-24T04:27:41,857   adding 'eremitalpa/eremitalpa.py'
2025-10-24T04:27:41,858   adding 'eremitalpa/flu_wider.py'
2025-10-24T04:27:41,863   adding 'eremitalpa/influenza.py'
2025-10-24T04:27:41,865   adding 'eremitalpa/lib.py'
2025-10-24T04:27:41,866   adding 'eremitalpa/spread_points.py'
2025-10-24T04:27:41,868   adding 'eremitalpa/scripts/__init__.py'
2025-10-24T04:27:41,869   adding 'eremitalpa/scripts/align_to_reference.py'
2025-10-24T04:27:41,870   adding 'eremitalpa/scripts/convert_seq.py'
2025-10-24T04:27:41,871   adding 'eremitalpa/scripts/filter_similar_hd.py'
2025-10-24T04:27:41,873   adding 'eremitalpa/scripts/influenza_cluster_color_palette.py'
2025-10-24T04:27:41,874   adding 'eremitalpa/scripts/make_chimera.py'
2025-10-24T04:27:41,875   adding 'eremitalpa/scripts/plot_labelled_phylogeny.py'
2025-10-24T04:27:41,877   adding 'eremitalpa/scripts/print_phylogeny_leaves.py'
2025-10-24T04:27:41,878   adding 'eremitalpa/scripts/revcomp_match.py'
2025-10-24T04:27:41,879   adding 'eremitalpa/scripts/write_iqtree_ancestral_seqs.py'
2025-10-24T04:27:41,882   adding 'test/test_bio.py'
2025-10-24T04:27:41,884   adding 'test/test_eremitalpa.py'
2025-10-24T04:27:41,886   adding 'test/test_influenza.py'
2025-10-24T04:27:41,887   adding 'test/test_lib.py'
2025-10-24T04:27:41,888   adding 'test/test_trees/a.tre'
2025-10-24T04:27:41,889   adding 'test/test_trees/b.tre'
2025-10-24T04:27:41,891   adding 'eremitalpa-1.1.13.dist-info/METADATA'
2025-10-24T04:27:41,892   adding 'eremitalpa-1.1.13.dist-info/WHEEL'
2025-10-24T04:27:41,893   adding 'eremitalpa-1.1.13.dist-info/entry_points.txt'
2025-10-24T04:27:41,894   adding 'eremitalpa-1.1.13.dist-info/top_level.txt'
2025-10-24T04:27:41,895   adding 'eremitalpa-1.1.13.dist-info/RECORD'
2025-10-24T04:27:41,897   removing build/bdist.linux-armv7l/wheel
2025-10-24T04:27:42,011   Building wheel for eremitalpa (pyproject.toml): finished with status 'done'
2025-10-24T04:27:42,017   Created wheel for eremitalpa: filename=eremitalpa-1.1.13-py3-none-any.whl size=65794 sha256=587810128b73809e048e11a0d18696972f8ec8317fa840f631fe52b000a51927
2025-10-24T04:27:42,018   Stored in directory: /tmp/pip-ephem-wheel-cache-7u7flst_/wheels/e8/dc/98/8eb9d237670e4ea5ce9a7c25ef9f1a25ba423f7b7a31529969
2025-10-24T04:27:42,029 Successfully built eremitalpa
2025-10-24T04:27:42,034 Removed build tracker: '/tmp/pip-build-tracker-uqm03mid'