2025-10-31T17:49:27,646 Created temporary directory: /tmp/pip-ephem-wheel-cache-oof_nqsu 2025-10-31T17:49:27,648 Created temporary directory: /tmp/pip-build-tracker-7flbml75 2025-10-31T17:49:27,648 Initialized build tracking at /tmp/pip-build-tracker-7flbml75 2025-10-31T17:49:27,649 Created build tracker: /tmp/pip-build-tracker-7flbml75 2025-10-31T17:49:27,649 Entered build tracker: /tmp/pip-build-tracker-7flbml75 2025-10-31T17:49:27,650 Created temporary directory: /tmp/pip-wheel-x7voe216 2025-10-31T17:49:27,653 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2025-10-31T17:49:27,655 Created temporary directory: /tmp/pip-ephem-wheel-cache-koya_1ql 2025-10-31T17:49:27,677 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-10-31T17:49:27,680 2 location(s) to search for versions of openhcs: 2025-10-31T17:49:27,680 * https://pypi.org/simple/openhcs/ 2025-10-31T17:49:27,680 * https://www.piwheels.org/simple/openhcs/ 2025-10-31T17:49:27,681 Fetching project page and analyzing links: https://pypi.org/simple/openhcs/ 2025-10-31T17:49:27,682 Getting page https://pypi.org/simple/openhcs/ 2025-10-31T17:49:27,683 Found index url https://pypi.org/simple 2025-10-31T17:49:27,900 Fetched page https://pypi.org/simple/openhcs/ as application/vnd.pypi.simple.v1+json 2025-10-31T17:49:27,908 Skipping link: No binaries permitted for openhcs: https://files.pythonhosted.org/packages/32/61/fd3793fd89f7863e12f7007aed7474ed43c312f1b3b2844d67b39c19975b/openhcs-0.1.0-py3-none-any.whl (from https://pypi.org/simple/openhcs/) (requires-python:>=3.9) 2025-10-31T17:49:27,909 Found link https://files.pythonhosted.org/packages/08/58/ff5bc05532bb8006510f5d43a958b66ab3bd8f1e0099438744e39e2cb6ca/openhcs-0.1.0.tar.gz (from https://pypi.org/simple/openhcs/) (requires-python:>=3.9), version: 0.1.0 2025-10-31T17:49:27,910 Skipping link: No binaries permitted for openhcs: https://files.pythonhosted.org/packages/76/b6/28590bacffe1a1494f3211fc01afa35999679f78ba1b47529f7dbd4543ec/openhcs-0.2.0-py3-none-any.whl (from https://pypi.org/simple/openhcs/) (requires-python:>=3.9) 2025-10-31T17:49:27,911 Found link https://files.pythonhosted.org/packages/9b/d7/50c56e66900fc874ae59e16ab5eb12709f587e7b63b7e61a12cba9f97611/openhcs-0.2.0.tar.gz (from https://pypi.org/simple/openhcs/) (requires-python:>=3.9), version: 0.2.0 2025-10-31T17:49:27,912 Skipping link: No binaries permitted for openhcs: https://files.pythonhosted.org/packages/e6/6c/4718ce19970563f6c8395d7e158c678afed3fc85cca34e9ff79c7251c888/openhcs-0.2.1-py3-none-any.whl (from https://pypi.org/simple/openhcs/) (requires-python:>=3.11) 2025-10-31T17:49:27,913 Found link https://files.pythonhosted.org/packages/86/f4/c7781679478ebaf1c1e32b1e9a15570ecbe0cf67d2acbb0bf11323fb3af3/openhcs-0.2.1.tar.gz (from https://pypi.org/simple/openhcs/) (requires-python:>=3.11), version: 0.2.1 2025-10-31T17:49:27,914 Skipping link: No binaries permitted for openhcs: https://files.pythonhosted.org/packages/ca/f4/8cdb39a158282ff776d1542d9207fc29c893db671ce8a349d7683060e3ea/openhcs-0.2.2-py3-none-any.whl (from https://pypi.org/simple/openhcs/) (requires-python:>=3.11) 2025-10-31T17:49:27,914 Found link https://files.pythonhosted.org/packages/f6/d4/5fa99a18640bb18d1c933d54ab246f2140fd41395c7a61059ca326ab02c2/openhcs-0.2.2.tar.gz (from https://pypi.org/simple/openhcs/) (requires-python:>=3.11), version: 0.2.2 2025-10-31T17:49:27,915 Skipping link: No binaries permitted for openhcs: https://files.pythonhosted.org/packages/2f/fc/f0e5e1e90eb21dbee241b6b67fe06f9e5c82013766cae4179babab2fd643/openhcs-0.2.3-py3-none-any.whl (from https://pypi.org/simple/openhcs/) (requires-python:>=3.11) 2025-10-31T17:49:27,916 Found link https://files.pythonhosted.org/packages/11/87/259a8d696f10529161d68c1efc5ceb8c0ca2f83a126eb5d71f3492580cc3/openhcs-0.2.3.tar.gz (from https://pypi.org/simple/openhcs/) (requires-python:>=3.11), version: 0.2.3 2025-10-31T17:49:27,917 Skipping link: No binaries permitted for openhcs: https://files.pythonhosted.org/packages/6e/78/20346661fd7596bce25b9f94f89a7a7f4fcf93b06860544101d7db2568aa/openhcs-0.2.4-py3-none-any.whl (from https://pypi.org/simple/openhcs/) (requires-python:>=3.11) 2025-10-31T17:49:27,918 Found link https://files.pythonhosted.org/packages/81/76/b95f21f2f61557602ca50cec3d4da9da4e6a8c978cfcbc50ac39da37cf99/openhcs-0.2.4.tar.gz (from https://pypi.org/simple/openhcs/) (requires-python:>=3.11), version: 0.2.4 2025-10-31T17:49:27,919 Skipping link: No binaries permitted for openhcs: https://files.pythonhosted.org/packages/fd/43/c95cc54ee996b827c955733c8f4b8bbb798414e100f670809c8eb85eb6bf/openhcs-0.2.5-py3-none-any.whl (from https://pypi.org/simple/openhcs/) (requires-python:>=3.11) 2025-10-31T17:49:27,919 Found link https://files.pythonhosted.org/packages/c2/5e/3ca409d522c3e8a306e81534323262095e98090bdf18c28443ffb3b516e4/openhcs-0.2.5.tar.gz (from https://pypi.org/simple/openhcs/) (requires-python:>=3.11), version: 0.2.5 2025-10-31T17:49:27,920 Skipping link: No binaries permitted for openhcs: https://files.pythonhosted.org/packages/9d/4c/c88e32a32361daf8ce440b9ad6303c04f1e38bd1daf0f32014bfb82c82e6/openhcs-0.2.6-py3-none-any.whl (from https://pypi.org/simple/openhcs/) (requires-python:>=3.11) 2025-10-31T17:49:27,921 Found link https://files.pythonhosted.org/packages/d3/04/bc35e27926f0091875dab57223f18f8bb195270d6afb866f6ef73457a5ad/openhcs-0.2.6.tar.gz (from https://pypi.org/simple/openhcs/) (requires-python:>=3.11), version: 0.2.6 2025-10-31T17:49:27,921 Skipping link: No binaries permitted for openhcs: https://files.pythonhosted.org/packages/ba/d4/03af540ff755b59330e5b5be7c96c2405a70f3b89ad89944fa52ab17f80a/openhcs-0.2.7-py3-none-any.whl (from https://pypi.org/simple/openhcs/) (requires-python:>=3.11) 2025-10-31T17:49:27,922 Found link https://files.pythonhosted.org/packages/ed/b9/c022a5d8fb9812a3b22d9e67225066278c7800d850351ddad99023e4c7e1/openhcs-0.2.7.tar.gz (from https://pypi.org/simple/openhcs/) (requires-python:>=3.11), version: 0.2.7 2025-10-31T17:49:27,923 Skipping link: No binaries permitted for openhcs: https://files.pythonhosted.org/packages/83/4c/cb94f43412b10d9cab3626b17225a6c2e576a3a1fb8bd67e3dfa51a491e6/openhcs-0.2.8-py3-none-any.whl (from https://pypi.org/simple/openhcs/) (requires-python:>=3.11) 2025-10-31T17:49:27,924 Found link https://files.pythonhosted.org/packages/2d/e0/633d7a2c0533cd7f2b1bf0623dbd1acb834831677befb3e2f8e92d240471/openhcs-0.2.8.tar.gz (from https://pypi.org/simple/openhcs/) (requires-python:>=3.11), version: 0.2.8 2025-10-31T17:49:27,924 Skipping link: No binaries permitted for openhcs: https://files.pythonhosted.org/packages/1d/c1/46c97d1e8b2aa7354a3db0e85d7a3089ae296f15fd049823caeaf7e4a984/openhcs-0.2.9-py3-none-any.whl (from https://pypi.org/simple/openhcs/) (requires-python:>=3.11) 2025-10-31T17:49:27,925 Found link https://files.pythonhosted.org/packages/13/c3/d8091f9abba077b53a765c16c4a0e3562c9d9184d5b67fa99b76c07b341e/openhcs-0.2.9.tar.gz (from https://pypi.org/simple/openhcs/) (requires-python:>=3.11), version: 0.2.9 2025-10-31T17:49:27,926 Skipping link: No binaries permitted for openhcs: https://files.pythonhosted.org/packages/14/ea/2393f9abb50c0a0f04d8b0e4af95522b27bdeef9726ddf428b5f40ff403f/openhcs-0.2.10-py3-none-any.whl (from https://pypi.org/simple/openhcs/) (requires-python:>=3.11) 2025-10-31T17:49:27,927 Found link https://files.pythonhosted.org/packages/45/56/d7cdc08e24ed5ff67593f220df82547bb7e8f08b5b0b8e00c45feec6ad9f/openhcs-0.2.10.tar.gz (from https://pypi.org/simple/openhcs/) (requires-python:>=3.11), version: 0.2.10 2025-10-31T17:49:27,927 Skipping link: No binaries permitted for openhcs: https://files.pythonhosted.org/packages/06/1c/cf6e7c752f9341b39b88477df854aef5325014b91b88aec46bf134e21db0/openhcs-0.3.0-py3-none-any.whl (from https://pypi.org/simple/openhcs/) (requires-python:>=3.11) 2025-10-31T17:49:27,928 Found link https://files.pythonhosted.org/packages/57/3b/df929b9bd04631a890d0f996da02fcd1e6ed334b2638200ccb5e4f685bb4/openhcs-0.3.0.tar.gz (from https://pypi.org/simple/openhcs/) (requires-python:>=3.11), version: 0.3.0 2025-10-31T17:49:27,929 Skipping link: No binaries permitted for openhcs: https://files.pythonhosted.org/packages/96/61/584a737741263d3a9bafec43a31fc6ca552e8689e2bc69c1fd0115c32c65/openhcs-0.3.1-py3-none-any.whl (from https://pypi.org/simple/openhcs/) (requires-python:>=3.11) 2025-10-31T17:49:27,930 Found link https://files.pythonhosted.org/packages/62/0d/065ebf9f22c5b4e9a89aea0b1e44a44eaaaa61a7c83c465df39cdda96420/openhcs-0.3.1.tar.gz (from https://pypi.org/simple/openhcs/) (requires-python:>=3.11), version: 0.3.1 2025-10-31T17:49:27,931 Skipping link: No binaries permitted for openhcs: https://files.pythonhosted.org/packages/20/3a/7c99e60f3defc8f4f2f00abafc37c61bf8f82545ccb0c015bfa60e3f453f/openhcs-0.3.2-py3-none-any.whl (from https://pypi.org/simple/openhcs/) (requires-python:>=3.11) 2025-10-31T17:49:27,931 Found link https://files.pythonhosted.org/packages/9f/40/1ea3b493593ed30059445d20b3a293a0ae437b298616e21cb1bf8ee8787b/openhcs-0.3.2.tar.gz (from https://pypi.org/simple/openhcs/) (requires-python:>=3.11), version: 0.3.2 2025-10-31T17:49:27,932 Skipping link: No binaries permitted for openhcs: https://files.pythonhosted.org/packages/28/bf/b8470afff99657d43c13ea51ee0fe02a0bdda95dd9fdb9316c77ac1fa300/openhcs-0.3.3-py3-none-any.whl (from https://pypi.org/simple/openhcs/) (requires-python:>=3.11) 2025-10-31T17:49:27,933 Found link https://files.pythonhosted.org/packages/d6/78/4c3ba6e6beff0b7b488d8f227131994e299a62ec32997428db8890989084/openhcs-0.3.3.tar.gz (from https://pypi.org/simple/openhcs/) (requires-python:>=3.11), version: 0.3.3 2025-10-31T17:49:27,933 Skipping link: No binaries permitted for openhcs: https://files.pythonhosted.org/packages/0b/c3/0e5eb353f42b92a0b7619633813054e988385eb1f3d0fdcae896ee01a17e/openhcs-0.3.5-py3-none-any.whl (from https://pypi.org/simple/openhcs/) (requires-python:>=3.11) 2025-10-31T17:49:27,934 Found link https://files.pythonhosted.org/packages/4d/32/2f15437785c50bb2bddc1b43065f5528f24e9b41598bcda66c3444d3245a/openhcs-0.3.5.tar.gz (from https://pypi.org/simple/openhcs/) (requires-python:>=3.11), version: 0.3.5 2025-10-31T17:49:27,935 Skipping link: No binaries permitted for openhcs: https://files.pythonhosted.org/packages/6c/7d/1e366a1cb924ec8e63e27c50f70ba56ba9d1a8672d793a3bc54b69e3a886/openhcs-0.3.7-py3-none-any.whl (from https://pypi.org/simple/openhcs/) (requires-python:>=3.11) 2025-10-31T17:49:27,936 Found link https://files.pythonhosted.org/packages/9f/6f/a19b9534bd5b64ffca4191aba6bfb5316ebd5ab60758050c1f3c99f3ce8d/openhcs-0.3.7.tar.gz (from https://pypi.org/simple/openhcs/) (requires-python:>=3.11), version: 0.3.7 2025-10-31T17:49:27,936 Skipping link: No binaries permitted for openhcs: https://files.pythonhosted.org/packages/86/2a/711f7076f2f71cfcf0422a7e75de185243fd0e4c363ab4452049c8bf0a2f/openhcs-0.3.8-py3-none-any.whl (from https://pypi.org/simple/openhcs/) (requires-python:>=3.11) 2025-10-31T17:49:27,937 Found link https://files.pythonhosted.org/packages/cd/c9/85aae265c5a2da4e6f2abadd3d8f865372d149f61bf168780c94b468e4ec/openhcs-0.3.8.tar.gz (from https://pypi.org/simple/openhcs/) (requires-python:>=3.11), version: 0.3.8 2025-10-31T17:49:27,938 Skipping link: No binaries permitted for openhcs: https://files.pythonhosted.org/packages/0d/cc/e2f8aaf7785f34e165ffed8ae0209cdd35c1193061ffc1430f350325cb55/openhcs-0.3.9-py3-none-any.whl (from https://pypi.org/simple/openhcs/) (requires-python:>=3.11) 2025-10-31T17:49:27,939 Found link https://files.pythonhosted.org/packages/63/9a/1c264f869caf1a334e051217b5d65131d37987da9b7e281096072c4d6c31/openhcs-0.3.9.tar.gz (from https://pypi.org/simple/openhcs/) (requires-python:>=3.11), version: 0.3.9 2025-10-31T17:49:27,939 Skipping link: No binaries permitted for openhcs: https://files.pythonhosted.org/packages/cc/03/4bef604c0f8c20d6981b0caaf79bcf36db79fbfbf24a62c4d9f4fe5ded81/openhcs-0.3.10-py3-none-any.whl (from https://pypi.org/simple/openhcs/) (requires-python:>=3.11) 2025-10-31T17:49:27,940 Found link https://files.pythonhosted.org/packages/13/1e/748575496cd66ba75546e9b8edf3ed75618f2276045223b961a3a4f016b5/openhcs-0.3.10.tar.gz (from https://pypi.org/simple/openhcs/) (requires-python:>=3.11), version: 0.3.10 2025-10-31T17:49:27,941 Fetching project page and analyzing links: https://www.piwheels.org/simple/openhcs/ 2025-10-31T17:49:27,942 Getting page https://www.piwheels.org/simple/openhcs/ 2025-10-31T17:49:27,943 Found index url https://www.piwheels.org/simple 2025-10-31T17:49:28,106 Fetched page https://www.piwheels.org/simple/openhcs/ as text/html 2025-10-31T17:49:28,112 Skipping link: No binaries permitted for openhcs: https://www.piwheels.org/simple/openhcs/openhcs-0.3.7-py3-none-any.whl#sha256=ceed18ad5081523544717b0233f83e10f4f7609101dc68fc1377ffe6e8170225 (from https://www.piwheels.org/simple/openhcs/) (requires-python:>=3.11) 2025-10-31T17:49:28,113 Skipping link: No binaries permitted for openhcs: https://www.piwheels.org/simple/openhcs/openhcs-0.3.5-py3-none-any.whl#sha256=92918a7a769ca08e8845b31394a9f0003a98b1ae9d77c0fefdc5bd33ad7b26d7 (from https://www.piwheels.org/simple/openhcs/) (requires-python:>=3.11) 2025-10-31T17:49:28,114 Skipping link: No binaries permitted for openhcs: https://www.piwheels.org/simple/openhcs/openhcs-0.3.3-py3-none-any.whl#sha256=0afb4e00b708ca3e3d765a2b0d35c1a75dfa9f497d111ad169d465cb305de44b (from https://www.piwheels.org/simple/openhcs/) (requires-python:>=3.11) 2025-10-31T17:49:28,114 Skipping link: No binaries permitted for openhcs: https://www.piwheels.org/simple/openhcs/openhcs-0.3.2-py3-none-any.whl#sha256=ae1acde7dceebce4d77a2502a39bad19b8d312b0467915d337313c42d27e5417 (from https://www.piwheels.org/simple/openhcs/) (requires-python:>=3.11) 2025-10-31T17:49:28,114 Skipping link: No binaries permitted for openhcs: https://www.piwheels.org/simple/openhcs/openhcs-0.3.1-py3-none-any.whl#sha256=14033f6acda51d48e2ad955088dda686522e3fc718d32aec90e6bee082b8b576 (from https://www.piwheels.org/simple/openhcs/) (requires-python:>=3.11) 2025-10-31T17:49:28,115 Skipping link: No binaries permitted for openhcs: https://www.piwheels.org/simple/openhcs/openhcs-0.3.0-py3-none-any.whl#sha256=7be5a93117857fbd9b52105460a10bd8613d848e067cad90df0a4aaf7c8e17e9 (from https://www.piwheels.org/simple/openhcs/) (requires-python:>=3.11) 2025-10-31T17:49:28,116 Skipping link: No binaries permitted for openhcs: https://www.piwheels.org/simple/openhcs/openhcs-0.2.10-py3-none-any.whl#sha256=dd186cec119b68e471b39dd438fd2ebd8cdee09f1e99f6986c3c82c163eb5aac (from https://www.piwheels.org/simple/openhcs/) (requires-python:>=3.11) 2025-10-31T17:49:28,116 Skipping link: No binaries permitted for openhcs: https://www.piwheels.org/simple/openhcs/openhcs-0.2.9-py3-none-any.whl#sha256=cf53e8ca6157a07cce594755da3322223171cdcab882d68e60fc0aa756a53ef3 (from https://www.piwheels.org/simple/openhcs/) (requires-python:>=3.11) 2025-10-31T17:49:28,117 Skipping link: No binaries permitted for openhcs: https://www.piwheels.org/simple/openhcs/openhcs-0.2.8-py3-none-any.whl#sha256=3ab357f123753ad97e36165e1047b1a73735023a1c8fca9e56d149a302db7acc (from https://www.piwheels.org/simple/openhcs/) (requires-python:>=3.11) 2025-10-31T17:49:28,117 Skipping link: No binaries permitted for openhcs: https://www.piwheels.org/simple/openhcs/openhcs-0.2.7-py3-none-any.whl#sha256=384218c2d0106ed8107d1660e299d6e107a801ffb41b282c3b1409da467bdcc1 (from https://www.piwheels.org/simple/openhcs/) (requires-python:>=3.11) 2025-10-31T17:49:28,118 Skipping link: No binaries permitted for openhcs: https://www.piwheels.org/simple/openhcs/openhcs-0.2.6-py3-none-any.whl#sha256=e61e9714324a3db5899ef09ac55a52cb32b37b52b0c289655e4b6e534475fa81 (from https://www.piwheels.org/simple/openhcs/) (requires-python:>=3.11) 2025-10-31T17:49:28,118 Skipping link: No binaries permitted for openhcs: https://www.piwheels.org/simple/openhcs/openhcs-0.2.5-py3-none-any.whl#sha256=499ff216a432cb4a3d7eb32b053ed60cd76c8e9a8f83fe1c78cb07f7d1c3bef7 (from https://www.piwheels.org/simple/openhcs/) (requires-python:>=3.11) 2025-10-31T17:49:28,119 Skipping link: No binaries permitted for openhcs: https://www.piwheels.org/simple/openhcs/openhcs-0.2.4-py3-none-any.whl#sha256=0a70c40f64e71607a32a46c314ec81fb5b5c93a69a7254c9ab7a40601c29138b (from https://www.piwheels.org/simple/openhcs/) (requires-python:>=3.11) 2025-10-31T17:49:28,120 Skipping link: No binaries permitted for openhcs: https://www.piwheels.org/simple/openhcs/openhcs-0.2.3-py3-none-any.whl#sha256=2bb0a612d4138700732b953a77d282b590e88ce18ffcc4f93cbaacff831a00d3 (from https://www.piwheels.org/simple/openhcs/) (requires-python:>=3.11) 2025-10-31T17:49:28,120 Skipping link: No binaries permitted for openhcs: https://www.piwheels.org/simple/openhcs/openhcs-0.2.2-py3-none-any.whl#sha256=5ff1b3489a4726934b8f3a5ec68adf41be2e1d446ff37b0e59aa855524bec924 (from https://www.piwheels.org/simple/openhcs/) (requires-python:>=3.11) 2025-10-31T17:49:28,121 Skipping link: No binaries permitted for openhcs: https://www.piwheels.org/simple/openhcs/openhcs-0.2.1-py3-none-any.whl#sha256=abe69922e019302499c0582fce23d595ac22d0210553bacb2d78609ed30aac7e (from https://www.piwheels.org/simple/openhcs/) (requires-python:>=3.11) 2025-10-31T17:49:28,121 Skipping link: No binaries permitted for openhcs: https://www.piwheels.org/simple/openhcs/openhcs-0.2.0-py3-none-any.whl#sha256=ab5b6a8a68062a613647d50036934e7cae22cdbb55b431968d30bebce1257b38 (from https://www.piwheels.org/simple/openhcs/) (requires-python:>=3.9) 2025-10-31T17:49:28,121 Skipping link: No binaries permitted for openhcs: https://www.piwheels.org/simple/openhcs/openhcs-0.1.0-py3-none-any.whl#sha256=0194f79aad42bd320b96ba5e3e78442dca6fc0b9598eeb190acd3d48928cea02 (from https://www.piwheels.org/simple/openhcs/) (requires-python:>=3.9) 2025-10-31T17:49:28,122 Skipping link: not a file: https://www.piwheels.org/simple/openhcs/ 2025-10-31T17:49:28,122 Skipping link: not a file: https://pypi.org/simple/openhcs/ 2025-10-31T17:49:28,147 Given no hashes to check 1 links for project 'openhcs': discarding no candidates 2025-10-31T17:49:28,167 Collecting openhcs==0.3.8 2025-10-31T17:49:28,169 Created temporary directory: /tmp/pip-unpack-13f9jbgi 2025-10-31T17:49:28,306 Downloading openhcs-0.3.8.tar.gz (931 kB) 2025-10-31T17:49:29,139 Added openhcs==0.3.8 from https://files.pythonhosted.org/packages/cd/c9/85aae265c5a2da4e6f2abadd3d8f865372d149f61bf168780c94b468e4ec/openhcs-0.3.8.tar.gz to build tracker '/tmp/pip-build-tracker-7flbml75' 2025-10-31T17:49:29,146 Created temporary directory: /tmp/pip-build-env-uzp5g1vf 2025-10-31T17:49:29,151 Installing build dependencies: started 2025-10-31T17:49:29,152 Running command pip subprocess to install build dependencies 2025-10-31T17:49:30,287 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2025-10-31T17:49:30,906 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2025-10-31T17:49:30,930 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-10-31T17:49:32,647 Collecting setuptools>=61.0 2025-10-31T17:49:32,803 Using cached https://www.piwheels.org/simple/setuptools/setuptools-80.9.0-py3-none-any.whl (1.2 MB) 2025-10-31T17:49:33,102 Collecting wheel 2025-10-31T17:49:33,118 Using cached https://www.piwheels.org/simple/wheel/wheel-0.45.1-py3-none-any.whl (72 kB) 2025-10-31T17:49:36,002 Installing collected packages: wheel, setuptools 2025-10-31T17:49:36,252 Creating /tmp/pip-build-env-uzp5g1vf/overlay/local/bin 2025-10-31T17:49:36,255 changing mode of /tmp/pip-build-env-uzp5g1vf/overlay/local/bin/wheel to 755 2025-10-31T17:49:39,928 Successfully installed setuptools-80.9.0 wheel-0.45.1 2025-10-31T17:49:40,202 Installing build dependencies: finished with status 'done' 2025-10-31T17:49:40,208 Getting requirements to build wheel: started 2025-10-31T17:49:40,210 Running command Getting requirements to build wheel 2025-10-31T17:49:40,879 /tmp/pip-build-env-uzp5g1vf/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2025-10-31T17:49:40,879 !! 2025-10-31T17:49:40,880 ******************************************************************************** 2025-10-31T17:49:40,881 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2025-10-31T17:49:40,881 By 2026-Feb-18, you need to update your project and remove deprecated calls 2025-10-31T17:49:40,882 or your builds will no longer be supported. 2025-10-31T17:49:40,883 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-10-31T17:49:40,883 ******************************************************************************** 2025-10-31T17:49:40,884 !! 2025-10-31T17:49:40,885 corresp(dist, value, root_dir) 2025-10-31T17:49:40,980 /tmp/pip-build-env-uzp5g1vf/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-10-31T17:49:40,980 !! 2025-10-31T17:49:40,981 ******************************************************************************** 2025-10-31T17:49:40,982 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-10-31T17:49:40,983 License :: OSI Approved :: MIT License 2025-10-31T17:49:40,984 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-10-31T17:49:40,985 ******************************************************************************** 2025-10-31T17:49:40,986 !! 2025-10-31T17:49:40,987 dist._finalize_license_expression() 2025-10-31T17:49:40,991 /tmp/pip-build-env-uzp5g1vf/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-10-31T17:49:40,991 !! 2025-10-31T17:49:40,992 ******************************************************************************** 2025-10-31T17:49:40,993 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-10-31T17:49:40,994 License :: OSI Approved :: MIT License 2025-10-31T17:49:40,995 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-10-31T17:49:40,996 ******************************************************************************** 2025-10-31T17:49:40,997 !! 2025-10-31T17:49:40,997 self._finalize_license_expression() 2025-10-31T17:49:40,999 running egg_info 2025-10-31T17:49:41,006 writing openhcs.egg-info/PKG-INFO 2025-10-31T17:49:41,037 writing dependency_links to openhcs.egg-info/dependency_links.txt 2025-10-31T17:49:41,039 writing entry points to openhcs.egg-info/entry_points.txt 2025-10-31T17:49:41,060 writing requirements to openhcs.egg-info/requires.txt 2025-10-31T17:49:41,061 writing top-level names to openhcs.egg-info/top_level.txt 2025-10-31T17:49:41,216 reading manifest file 'openhcs.egg-info/SOURCES.txt' 2025-10-31T17:49:41,247 writing manifest file 'openhcs.egg-info/SOURCES.txt' 2025-10-31T17:49:41,347 Getting requirements to build wheel: finished with status 'done' 2025-10-31T17:49:41,351 Created temporary directory: /tmp/pip-modern-metadata-8ukrh0zs 2025-10-31T17:49:41,353 Preparing metadata (pyproject.toml): started 2025-10-31T17:49:41,354 Running command Preparing metadata (pyproject.toml) 2025-10-31T17:49:41,952 /tmp/pip-build-env-uzp5g1vf/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2025-10-31T17:49:41,952 !! 2025-10-31T17:49:41,953 ******************************************************************************** 2025-10-31T17:49:41,954 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2025-10-31T17:49:41,955 By 2026-Feb-18, you need to update your project and remove deprecated calls 2025-10-31T17:49:41,955 or your builds will no longer be supported. 2025-10-31T17:49:41,956 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-10-31T17:49:41,956 ******************************************************************************** 2025-10-31T17:49:41,957 !! 2025-10-31T17:49:41,958 corresp(dist, value, root_dir) 2025-10-31T17:49:42,048 /tmp/pip-build-env-uzp5g1vf/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-10-31T17:49:42,049 !! 2025-10-31T17:49:42,050 ******************************************************************************** 2025-10-31T17:49:42,050 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-10-31T17:49:42,051 License :: OSI Approved :: MIT License 2025-10-31T17:49:42,052 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-10-31T17:49:42,053 ******************************************************************************** 2025-10-31T17:49:42,054 !! 2025-10-31T17:49:42,055 dist._finalize_license_expression() 2025-10-31T17:49:42,059 /tmp/pip-build-env-uzp5g1vf/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-10-31T17:49:42,059 !! 2025-10-31T17:49:42,061 ******************************************************************************** 2025-10-31T17:49:42,061 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-10-31T17:49:42,063 License :: OSI Approved :: MIT License 2025-10-31T17:49:42,064 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-10-31T17:49:42,064 ******************************************************************************** 2025-10-31T17:49:42,066 !! 2025-10-31T17:49:42,066 self._finalize_license_expression() 2025-10-31T17:49:42,067 running dist_info 2025-10-31T17:49:42,078 creating /tmp/pip-modern-metadata-8ukrh0zs/openhcs.egg-info 2025-10-31T17:49:42,079 writing /tmp/pip-modern-metadata-8ukrh0zs/openhcs.egg-info/PKG-INFO 2025-10-31T17:49:42,111 writing dependency_links to /tmp/pip-modern-metadata-8ukrh0zs/openhcs.egg-info/dependency_links.txt 2025-10-31T17:49:42,113 writing entry points to /tmp/pip-modern-metadata-8ukrh0zs/openhcs.egg-info/entry_points.txt 2025-10-31T17:49:42,133 writing requirements to /tmp/pip-modern-metadata-8ukrh0zs/openhcs.egg-info/requires.txt 2025-10-31T17:49:42,134 writing top-level names to /tmp/pip-modern-metadata-8ukrh0zs/openhcs.egg-info/top_level.txt 2025-10-31T17:49:42,136 writing manifest file '/tmp/pip-modern-metadata-8ukrh0zs/openhcs.egg-info/SOURCES.txt' 2025-10-31T17:49:42,282 reading manifest file '/tmp/pip-modern-metadata-8ukrh0zs/openhcs.egg-info/SOURCES.txt' 2025-10-31T17:49:42,296 writing manifest file '/tmp/pip-modern-metadata-8ukrh0zs/openhcs.egg-info/SOURCES.txt' 2025-10-31T17:49:42,297 creating '/tmp/pip-modern-metadata-8ukrh0zs/openhcs-0.3.8.dist-info' 2025-10-31T17:49:42,429 Preparing metadata (pyproject.toml): finished with status 'done' 2025-10-31T17:49:42,435 Source in /tmp/pip-wheel-x7voe216/openhcs_e2959d0b5ae444fa8c32f8d9c684e428 has version 0.3.8, which satisfies requirement openhcs==0.3.8 from https://files.pythonhosted.org/packages/cd/c9/85aae265c5a2da4e6f2abadd3d8f865372d149f61bf168780c94b468e4ec/openhcs-0.3.8.tar.gz 2025-10-31T17:49:42,437 Removed openhcs==0.3.8 from https://files.pythonhosted.org/packages/cd/c9/85aae265c5a2da4e6f2abadd3d8f865372d149f61bf168780c94b468e4ec/openhcs-0.3.8.tar.gz from build tracker '/tmp/pip-build-tracker-7flbml75' 2025-10-31T17:49:42,445 Created temporary directory: /tmp/pip-unpack-138o44lg 2025-10-31T17:49:42,446 Building wheels for collected packages: openhcs 2025-10-31T17:49:42,451 Created temporary directory: /tmp/pip-wheel-1rzichod 2025-10-31T17:49:42,451 Destination directory: /tmp/pip-wheel-1rzichod 2025-10-31T17:49:42,453 Building wheel for openhcs (pyproject.toml): started 2025-10-31T17:49:42,455 Running command Building wheel for openhcs (pyproject.toml) 2025-10-31T17:49:43,040 /tmp/pip-build-env-uzp5g1vf/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2025-10-31T17:49:43,040 !! 2025-10-31T17:49:43,041 ******************************************************************************** 2025-10-31T17:49:43,042 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2025-10-31T17:49:43,043 By 2026-Feb-18, you need to update your project and remove deprecated calls 2025-10-31T17:49:43,043 or your builds will no longer be supported. 2025-10-31T17:49:43,044 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-10-31T17:49:43,045 ******************************************************************************** 2025-10-31T17:49:43,046 !! 2025-10-31T17:49:43,047 corresp(dist, value, root_dir) 2025-10-31T17:49:43,128 /tmp/pip-build-env-uzp5g1vf/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-10-31T17:49:43,129 !! 2025-10-31T17:49:43,130 ******************************************************************************** 2025-10-31T17:49:43,131 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-10-31T17:49:43,132 License :: OSI Approved :: MIT License 2025-10-31T17:49:43,133 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-10-31T17:49:43,134 ******************************************************************************** 2025-10-31T17:49:43,135 !! 2025-10-31T17:49:43,136 dist._finalize_license_expression() 2025-10-31T17:49:43,139 /tmp/pip-build-env-uzp5g1vf/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-10-31T17:49:43,140 !! 2025-10-31T17:49:43,141 ******************************************************************************** 2025-10-31T17:49:43,142 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-10-31T17:49:43,143 License :: OSI Approved :: MIT License 2025-10-31T17:49:43,144 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-10-31T17:49:43,145 ******************************************************************************** 2025-10-31T17:49:43,146 !! 2025-10-31T17:49:43,147 self._finalize_license_expression() 2025-10-31T17:49:43,147 running bdist_wheel 2025-10-31T17:49:43,163 running build 2025-10-31T17:49:43,163 running build_py 2025-10-31T17:49:43,170 creating build/lib/openhcs 2025-10-31T17:49:43,172 copying openhcs/__init__.py -> build/lib/openhcs 2025-10-31T17:49:43,175 creating build/lib/openhcs/config_framework 2025-10-31T17:49:43,176 copying openhcs/config_framework/config.py -> build/lib/openhcs/config_framework 2025-10-31T17:49:43,178 copying openhcs/config_framework/dual_axis_resolver.py -> build/lib/openhcs/config_framework 2025-10-31T17:49:43,181 copying openhcs/config_framework/context_manager.py -> build/lib/openhcs/config_framework 2025-10-31T17:49:43,183 copying openhcs/config_framework/__init__.py -> build/lib/openhcs/config_framework 2025-10-31T17:49:43,185 copying openhcs/config_framework/global_config.py -> build/lib/openhcs/config_framework 2025-10-31T17:49:43,187 copying openhcs/config_framework/cache_warming.py -> build/lib/openhcs/config_framework 2025-10-31T17:49:43,189 copying openhcs/config_framework/placeholder.py -> build/lib/openhcs/config_framework 2025-10-31T17:49:43,192 copying openhcs/config_framework/lazy_factory.py -> build/lib/openhcs/config_framework 2025-10-31T17:49:43,196 creating build/lib/openhcs/validation 2025-10-31T17:49:43,196 copying openhcs/validation/__init__.py -> build/lib/openhcs/validation 2025-10-31T17:49:43,198 copying openhcs/validation/ast_validator.py -> build/lib/openhcs/validation 2025-10-31T17:49:43,201 copying openhcs/validation/validate.py -> build/lib/openhcs/validation 2025-10-31T17:49:43,204 creating build/lib/openhcs/processing 2025-10-31T17:49:43,205 copying openhcs/processing/__init__.py -> build/lib/openhcs/processing 2025-10-31T17:49:43,207 copying openhcs/processing/func_registry.py -> build/lib/openhcs/processing 2025-10-31T17:49:43,210 creating build/lib/openhcs/microscopes 2025-10-31T17:49:43,211 copying openhcs/microscopes/opera_phenix.py -> build/lib/openhcs/microscopes 2025-10-31T17:49:43,214 copying openhcs/microscopes/__init__.py -> build/lib/openhcs/microscopes 2025-10-31T17:49:43,217 copying openhcs/microscopes/imagexpress.py -> build/lib/openhcs/microscopes 2025-10-31T17:49:43,220 copying openhcs/microscopes/handler_registry_service.py -> build/lib/openhcs/microscopes 2025-10-31T17:49:43,222 copying openhcs/microscopes/opera_phenix_xml_parser.py -> build/lib/openhcs/microscopes 2025-10-31T17:49:43,224 copying openhcs/microscopes/omero.py -> build/lib/openhcs/microscopes 2025-10-31T17:49:43,227 copying openhcs/microscopes/microscope_base.py -> build/lib/openhcs/microscopes 2025-10-31T17:49:43,230 copying openhcs/microscopes/microscope_interfaces.py -> build/lib/openhcs/microscopes 2025-10-31T17:49:43,233 copying openhcs/microscopes/openhcs.py -> build/lib/openhcs/microscopes 2025-10-31T17:49:43,236 creating build/lib/openhcs/io 2025-10-31T17:49:43,237 copying openhcs/io/disk.py -> build/lib/openhcs/io 2025-10-31T17:49:43,240 copying openhcs/io/metadata_writer.py -> build/lib/openhcs/io 2025-10-31T17:49:43,243 copying openhcs/io/streaming.py -> build/lib/openhcs/io 2025-10-31T17:49:43,245 copying openhcs/io/async_init.py -> build/lib/openhcs/io 2025-10-31T17:49:43,247 copying openhcs/io/filemanager.py -> build/lib/openhcs/io 2025-10-31T17:49:43,250 copying openhcs/io/pipeline_migration.py -> build/lib/openhcs/io 2025-10-31T17:49:43,252 copying openhcs/io/__init__.py -> build/lib/openhcs/io 2025-10-31T17:49:43,254 copying openhcs/io/napari_stream.py -> build/lib/openhcs/io 2025-10-31T17:49:43,257 copying openhcs/io/fiji_stream.py -> build/lib/openhcs/io 2025-10-31T17:49:43,259 copying openhcs/io/backend_registry.py -> build/lib/openhcs/io 2025-10-31T17:49:43,261 copying openhcs/io/base.py -> build/lib/openhcs/io 2025-10-31T17:49:43,264 copying openhcs/io/zarr.py -> build/lib/openhcs/io 2025-10-31T17:49:43,267 copying openhcs/io/omero_local.py -> build/lib/openhcs/io 2025-10-31T17:49:43,271 copying openhcs/io/exceptions.py -> build/lib/openhcs/io 2025-10-31T17:49:43,273 copying openhcs/io/memory.py -> build/lib/openhcs/io 2025-10-31T17:49:43,275 copying openhcs/io/virtual_workspace.py -> build/lib/openhcs/io 2025-10-31T17:49:43,278 copying openhcs/io/metadata_migration.py -> build/lib/openhcs/io 2025-10-31T17:49:43,280 copying openhcs/io/atomic.py -> build/lib/openhcs/io 2025-10-31T17:49:43,283 creating build/lib/openhcs/debug 2025-10-31T17:49:43,284 copying openhcs/debug/example_export_clean.py -> build/lib/openhcs/debug 2025-10-31T17:49:43,287 copying openhcs/debug/pickle_to_python.py -> build/lib/openhcs/debug 2025-10-31T17:49:43,290 copying openhcs/debug/example_export.py -> build/lib/openhcs/debug 2025-10-31T17:49:43,292 copying openhcs/debug/__init__.py -> build/lib/openhcs/debug 2025-10-31T17:49:43,293 copying openhcs/debug/export.py -> build/lib/openhcs/debug 2025-10-31T17:49:43,296 creating build/lib/openhcs/tests 2025-10-31T17:49:43,297 copying openhcs/tests/__init__.py -> build/lib/openhcs/tests 2025-10-31T17:49:43,299 copying openhcs/tests/basic_pipeline.py -> build/lib/openhcs/tests 2025-10-31T17:49:43,301 copying openhcs/tests/test_pipeline.py -> build/lib/openhcs/tests 2025-10-31T17:49:43,303 creating build/lib/openhcs/core 2025-10-31T17:49:43,304 copying openhcs/core/config.py -> build/lib/openhcs/core 2025-10-31T17:49:43,307 copying openhcs/core/log_utils.py -> build/lib/openhcs/core 2025-10-31T17:49:43,309 copying openhcs/core/xdg_paths.py -> build/lib/openhcs/core 2025-10-31T17:49:43,312 copying openhcs/core/lazy_placeholder.py -> build/lib/openhcs/core 2025-10-31T17:49:43,313 copying openhcs/core/__init__.py -> build/lib/openhcs/core 2025-10-31T17:49:43,315 copying openhcs/core/utils.py -> build/lib/openhcs/core 2025-10-31T17:49:43,318 copying openhcs/core/config_cache.py -> build/lib/openhcs/core 2025-10-31T17:49:43,320 copying openhcs/core/roi.py -> build/lib/openhcs/core 2025-10-31T17:49:43,323 copying openhcs/core/lazy_placeholder_simplified.py -> build/lib/openhcs/core 2025-10-31T17:49:43,325 copying openhcs/core/metadata_cache.py -> build/lib/openhcs/core 2025-10-31T17:49:43,327 copying openhcs/core/path_cache.py -> build/lib/openhcs/core 2025-10-31T17:49:43,329 copying openhcs/core/lazy_gpu_imports.py -> build/lib/openhcs/core 2025-10-31T17:49:43,332 copying openhcs/core/streaming_config_factory.py -> build/lib/openhcs/core 2025-10-31T17:49:43,334 copying openhcs/core/registry_discovery.py -> build/lib/openhcs/core 2025-10-31T17:49:43,337 creating build/lib/openhcs/introspection 2025-10-31T17:49:43,338 copying openhcs/introspection/unified_parameter_analyzer.py -> build/lib/openhcs/introspection 2025-10-31T17:49:43,341 copying openhcs/introspection/__init__.py -> build/lib/openhcs/introspection 2025-10-31T17:49:43,343 copying openhcs/introspection/signature_analyzer.py -> build/lib/openhcs/introspection 2025-10-31T17:49:43,346 creating build/lib/openhcs/omero 2025-10-31T17:49:43,347 copying openhcs/omero/__init__.py -> build/lib/openhcs/omero 2025-10-31T17:49:43,350 creating build/lib/openhcs/runtime 2025-10-31T17:49:43,351 copying openhcs/runtime/omero_instance_manager.py -> build/lib/openhcs/runtime 2025-10-31T17:49:43,354 copying openhcs/runtime/fiji_viewer_server.py -> build/lib/openhcs/runtime 2025-10-31T17:49:43,357 copying openhcs/runtime/fiji_stream_visualizer.py -> build/lib/openhcs/runtime 2025-10-31T17:49:43,360 copying openhcs/runtime/zmq_execution_server_launcher.py -> build/lib/openhcs/runtime 2025-10-31T17:49:43,362 copying openhcs/runtime/remote_orchestrator.py -> build/lib/openhcs/runtime 2025-10-31T17:49:43,364 copying openhcs/runtime/zmq_execution_client.py -> build/lib/openhcs/runtime 2025-10-31T17:49:43,367 copying openhcs/runtime/zmq_messages.py -> build/lib/openhcs/runtime 2025-10-31T17:49:43,369 copying openhcs/runtime/execution_server.py -> build/lib/openhcs/runtime 2025-10-31T17:49:43,372 copying openhcs/runtime/napari_stream_visualizer.py -> build/lib/openhcs/runtime 2025-10-31T17:49:43,375 copying openhcs/runtime/queue_tracker.py -> build/lib/openhcs/runtime 2025-10-31T17:49:43,378 copying openhcs/runtime/zmq_base.py -> build/lib/openhcs/runtime 2025-10-31T17:49:43,381 copying openhcs/runtime/zmq_execution_server.py -> build/lib/openhcs/runtime 2025-10-31T17:49:43,383 copying openhcs/runtime/roi_converters.py -> build/lib/openhcs/runtime 2025-10-31T17:49:43,386 creating build/lib/openhcs/constants 2025-10-31T17:49:43,387 copying openhcs/constants/streaming.py -> build/lib/openhcs/constants 2025-10-31T17:49:43,389 copying openhcs/constants/__init__.py -> build/lib/openhcs/constants 2025-10-31T17:49:43,391 copying openhcs/constants/input_source.py -> build/lib/openhcs/constants 2025-10-31T17:49:43,393 copying openhcs/constants/constants.py -> build/lib/openhcs/constants 2025-10-31T17:49:43,396 creating build/lib/openhcs/utils 2025-10-31T17:49:43,397 copying openhcs/utils/environment.py -> build/lib/openhcs/utils 2025-10-31T17:49:43,399 copying openhcs/utils/recache_function_registry.py -> build/lib/openhcs/utils 2025-10-31T17:49:43,401 copying openhcs/utils/performance_monitor.py -> build/lib/openhcs/utils 2025-10-31T17:49:43,403 copying openhcs/utils/enum_factory.py -> build/lib/openhcs/utils 2025-10-31T17:49:43,405 copying openhcs/utils/import_utils.py -> build/lib/openhcs/utils 2025-10-31T17:49:43,408 copying openhcs/utils/display_config_factory.py -> build/lib/openhcs/utils 2025-10-31T17:49:43,411 creating build/lib/openhcs/pyqt_gui 2025-10-31T17:49:43,412 copying openhcs/pyqt_gui/app.py -> build/lib/openhcs/pyqt_gui 2025-10-31T17:49:43,415 copying openhcs/pyqt_gui/config.py -> build/lib/openhcs/pyqt_gui 2025-10-31T17:49:43,417 copying openhcs/pyqt_gui/__init__.py -> build/lib/openhcs/pyqt_gui 2025-10-31T17:49:43,419 copying openhcs/pyqt_gui/__main__.py -> build/lib/openhcs/pyqt_gui 2025-10-31T17:49:43,421 copying openhcs/pyqt_gui/launch.py -> build/lib/openhcs/pyqt_gui 2025-10-31T17:49:43,423 copying openhcs/pyqt_gui/main.py -> build/lib/openhcs/pyqt_gui 2025-10-31T17:49:43,427 creating build/lib/openhcs/components 2025-10-31T17:49:43,428 copying openhcs/components/framework.py -> build/lib/openhcs/components 2025-10-31T17:49:43,430 copying openhcs/components/__init__.py -> build/lib/openhcs/components 2025-10-31T17:49:43,432 creating build/lib/openhcs/formats 2025-10-31T17:49:43,433 copying openhcs/formats/experimental_analysis.py -> build/lib/openhcs/formats 2025-10-31T17:49:43,437 copying openhcs/formats/metaxpress.py -> build/lib/openhcs/formats 2025-10-31T17:49:43,440 copying openhcs/formats/func_arg_prep.py -> build/lib/openhcs/formats 2025-10-31T17:49:43,443 creating build/lib/openhcs/processing/presets 2025-10-31T17:49:43,444 copying openhcs/processing/presets/__init__.py -> build/lib/openhcs/processing/presets 2025-10-31T17:49:43,446 creating build/lib/openhcs/processing/backends 2025-10-31T17:49:43,447 copying openhcs/processing/backends/__init__.py -> build/lib/openhcs/processing/backends 2025-10-31T17:49:43,450 creating build/lib/openhcs/processing/presets/pipelines 2025-10-31T17:49:43,451 copying openhcs/processing/presets/pipelines/cy5_ctb_cell_count.py -> build/lib/openhcs/processing/presets/pipelines 2025-10-31T17:49:43,453 copying openhcs/processing/presets/pipelines/10x_mfd_crop_analyze_dapi-fitc-cy5.py -> build/lib/openhcs/processing/presets/pipelines 2025-10-31T17:49:43,455 copying openhcs/processing/presets/pipelines/10x_mfd_stitch_ashlar_cpu.py -> build/lib/openhcs/processing/presets/pipelines 2025-10-31T17:49:43,457 copying openhcs/processing/presets/pipelines/imx_96_well_neurite_outgrowth_pipeline_cpu.py -> build/lib/openhcs/processing/presets/pipelines 2025-10-31T17:49:43,459 copying openhcs/processing/presets/pipelines/cy5_axon_cell_body_crop_analysis.py -> build/lib/openhcs/processing/presets/pipelines 2025-10-31T17:49:43,461 copying openhcs/processing/presets/pipelines/imx_96_well_neurite_outgrowth_pipeline_gpu.py -> build/lib/openhcs/processing/presets/pipelines 2025-10-31T17:49:43,463 copying openhcs/processing/presets/pipelines/10x_mfd_stitch_gpu.py -> build/lib/openhcs/processing/presets/pipelines 2025-10-31T17:49:43,465 copying openhcs/processing/presets/pipelines/test.py -> build/lib/openhcs/processing/presets/pipelines 2025-10-31T17:49:43,467 copying openhcs/processing/presets/pipelines/10x_mfd_crop_analyze.py -> build/lib/openhcs/processing/presets/pipelines 2025-10-31T17:49:43,470 creating build/lib/openhcs/processing/backends/lib_registry 2025-10-31T17:49:43,471 copying openhcs/processing/backends/lib_registry/unified_registry.py -> build/lib/openhcs/processing/backends/lib_registry 2025-10-31T17:49:43,474 copying openhcs/processing/backends/lib_registry/openhcs_registry.py -> build/lib/openhcs/processing/backends/lib_registry 2025-10-31T17:49:43,476 copying openhcs/processing/backends/lib_registry/registry_service.py -> build/lib/openhcs/processing/backends/lib_registry 2025-10-31T17:49:43,479 copying openhcs/processing/backends/lib_registry/pyclesperanto_registry.py -> build/lib/openhcs/processing/backends/lib_registry 2025-10-31T17:49:43,481 copying openhcs/processing/backends/lib_registry/scikit_image_registry.py -> build/lib/openhcs/processing/backends/lib_registry 2025-10-31T17:49:43,483 copying openhcs/processing/backends/lib_registry/cupy_registry.py -> build/lib/openhcs/processing/backends/lib_registry 2025-10-31T17:49:43,485 creating build/lib/openhcs/processing/backends/assemblers 2025-10-31T17:49:43,486 copying openhcs/processing/backends/assemblers/__init__.py -> build/lib/openhcs/processing/backends/assemblers 2025-10-31T17:49:43,488 copying openhcs/processing/backends/assemblers/self_supervised_stitcher.py -> build/lib/openhcs/processing/backends/assemblers 2025-10-31T17:49:43,491 copying openhcs/processing/backends/assemblers/assemble_stack_cupy.py -> build/lib/openhcs/processing/backends/assemblers 2025-10-31T17:49:43,494 copying openhcs/processing/backends/assemblers/assemble_stack_cpu.py -> build/lib/openhcs/processing/backends/assemblers 2025-10-31T17:49:43,497 creating build/lib/openhcs/processing/backends/enhance 2025-10-31T17:49:43,498 copying openhcs/processing/backends/enhance/dl_edof_unsupervised.py -> build/lib/openhcs/processing/backends/enhance 2025-10-31T17:49:43,500 copying openhcs/processing/backends/enhance/__init__.py -> build/lib/openhcs/processing/backends/enhance 2025-10-31T17:49:43,502 copying openhcs/processing/backends/enhance/self_supervised_2d_deconvolution.py -> build/lib/openhcs/processing/backends/enhance 2025-10-31T17:49:43,505 copying openhcs/processing/backends/enhance/basic_processor_cupy.py -> build/lib/openhcs/processing/backends/enhance 2025-10-31T17:49:43,508 copying openhcs/processing/backends/enhance/basic_processor_jax.py -> build/lib/openhcs/processing/backends/enhance 2025-10-31T17:49:43,510 copying openhcs/processing/backends/enhance/torch_nlm_processor.py -> build/lib/openhcs/processing/backends/enhance 2025-10-31T17:49:43,513 copying openhcs/processing/backends/enhance/jax_nlm_processor.py -> build/lib/openhcs/processing/backends/enhance 2025-10-31T17:49:43,515 copying openhcs/processing/backends/enhance/basic_processor_numpy.py -> build/lib/openhcs/processing/backends/enhance 2025-10-31T17:49:43,517 copying openhcs/processing/backends/enhance/n2v2_processor_torch.py -> build/lib/openhcs/processing/backends/enhance 2025-10-31T17:49:43,520 copying openhcs/processing/backends/enhance/cupy_clahe.py -> build/lib/openhcs/processing/backends/enhance 2025-10-31T17:49:43,523 copying openhcs/processing/backends/enhance/self_supervised_3d_deconvolution.py -> build/lib/openhcs/processing/backends/enhance 2025-10-31T17:49:43,526 copying openhcs/processing/backends/enhance/focus_torch.py -> build/lib/openhcs/processing/backends/enhance 2025-10-31T17:49:43,529 creating build/lib/openhcs/processing/backends/analysis 2025-10-31T17:49:43,530 copying openhcs/processing/backends/analysis/self_supervised_segmentation_3d.py -> build/lib/openhcs/processing/backends/analysis 2025-10-31T17:49:43,533 copying openhcs/processing/backends/analysis/cell_counting_cpu.py -> build/lib/openhcs/processing/backends/analysis 2025-10-31T17:49:43,536 copying openhcs/processing/backends/analysis/cache_utils.py -> build/lib/openhcs/processing/backends/analysis 2025-10-31T17:49:43,539 copying openhcs/processing/backends/analysis/cx5_format.py -> build/lib/openhcs/processing/backends/analysis 2025-10-31T17:49:43,542 copying openhcs/processing/backends/analysis/hmm_axon_torbi.py -> build/lib/openhcs/processing/backends/analysis 2025-10-31T17:49:43,544 copying openhcs/processing/backends/analysis/consolidate_analysis_results.py -> build/lib/openhcs/processing/backends/analysis 2025-10-31T17:49:43,547 copying openhcs/processing/backends/analysis/__init__.py -> build/lib/openhcs/processing/backends/analysis 2025-10-31T17:49:43,549 copying openhcs/processing/backends/analysis/consolidate_special_outputs.py -> build/lib/openhcs/processing/backends/analysis 2025-10-31T17:49:43,552 copying openhcs/processing/backends/analysis/hmm_axon.py -> build/lib/openhcs/processing/backends/analysis 2025-10-31T17:49:43,554 copying openhcs/processing/backends/analysis/cell_counting_pyclesperanto.py -> build/lib/openhcs/processing/backends/analysis 2025-10-31T17:49:43,558 copying openhcs/processing/backends/analysis/skan_axon_analysis.py -> build/lib/openhcs/processing/backends/analysis 2025-10-31T17:49:43,560 copying openhcs/processing/backends/analysis/dxf_mask_pipeline.py -> build/lib/openhcs/processing/backends/analysis 2025-10-31T17:49:43,563 copying openhcs/processing/backends/analysis/focus_analyzer.py -> build/lib/openhcs/processing/backends/analysis 2025-10-31T17:49:43,565 copying openhcs/processing/backends/analysis/multi_template_matching.py -> build/lib/openhcs/processing/backends/analysis 2025-10-31T17:49:43,568 copying openhcs/processing/backends/analysis/straighten_object_3d.py -> build/lib/openhcs/processing/backends/analysis 2025-10-31T17:49:43,571 copying openhcs/processing/backends/analysis/cell_counting_cupy.py -> build/lib/openhcs/processing/backends/analysis 2025-10-31T17:49:43,575 creating build/lib/openhcs/processing/backends/experimental_analysis 2025-10-31T17:49:43,576 copying openhcs/processing/backends/experimental_analysis/metaxpress_registry.py -> build/lib/openhcs/processing/backends/experimental_analysis 2025-10-31T17:49:43,578 copying openhcs/processing/backends/experimental_analysis/__init__.py -> build/lib/openhcs/processing/backends/experimental_analysis 2025-10-31T17:49:43,580 copying openhcs/processing/backends/experimental_analysis/format_registry_service.py -> build/lib/openhcs/processing/backends/experimental_analysis 2025-10-31T17:49:43,583 copying openhcs/processing/backends/experimental_analysis/unified_analysis_engine.py -> build/lib/openhcs/processing/backends/experimental_analysis 2025-10-31T17:49:43,585 copying openhcs/processing/backends/experimental_analysis/cx5_registry.py -> build/lib/openhcs/processing/backends/experimental_analysis 2025-10-31T17:49:43,588 copying openhcs/processing/backends/experimental_analysis/format_registry.py -> build/lib/openhcs/processing/backends/experimental_analysis 2025-10-31T17:49:43,590 creating build/lib/openhcs/processing/backends/processors 2025-10-31T17:49:43,592 copying openhcs/processing/backends/processors/torch_processor.py -> build/lib/openhcs/processing/backends/processors 2025-10-31T17:49:43,594 copying openhcs/processing/backends/processors/cupy_processor.py -> build/lib/openhcs/processing/backends/processors 2025-10-31T17:49:43,597 copying openhcs/processing/backends/processors/tensorflow_processor.py -> build/lib/openhcs/processing/backends/processors 2025-10-31T17:49:43,600 copying openhcs/processing/backends/processors/pyclesperanto_processor.py -> build/lib/openhcs/processing/backends/processors 2025-10-31T17:49:43,603 copying openhcs/processing/backends/processors/__init__.py -> build/lib/openhcs/processing/backends/processors 2025-10-31T17:49:43,605 copying openhcs/processing/backends/processors/numpy_processor.py -> build/lib/openhcs/processing/backends/processors 2025-10-31T17:49:43,608 copying openhcs/processing/backends/processors/percentile_utils.py -> build/lib/openhcs/processing/backends/processors 2025-10-31T17:49:43,610 copying openhcs/processing/backends/processors/jax_processor.py -> build/lib/openhcs/processing/backends/processors 2025-10-31T17:49:43,613 creating build/lib/openhcs/processing/backends/pos_gen 2025-10-31T17:49:43,615 copying openhcs/processing/backends/pos_gen/ashlar_main_cpu.py -> build/lib/openhcs/processing/backends/pos_gen 2025-10-31T17:49:43,618 copying openhcs/processing/backends/pos_gen/__init__.py -> build/lib/openhcs/processing/backends/pos_gen 2025-10-31T17:49:43,619 copying openhcs/processing/backends/pos_gen/mist_processor_cupy.py -> build/lib/openhcs/processing/backends/pos_gen 2025-10-31T17:49:43,621 copying openhcs/processing/backends/pos_gen/ashlar_main_gpu.py -> build/lib/openhcs/processing/backends/pos_gen 2025-10-31T17:49:43,625 creating build/lib/openhcs/processing/backends/pos_gen/mist 2025-10-31T17:49:43,626 copying openhcs/processing/backends/pos_gen/mist/phase_correlation.py -> build/lib/openhcs/processing/backends/pos_gen/mist 2025-10-31T17:49:43,628 copying openhcs/processing/backends/pos_gen/mist/__init__.py -> build/lib/openhcs/processing/backends/pos_gen/mist 2025-10-31T17:49:43,630 copying openhcs/processing/backends/pos_gen/mist/quality_metrics.py -> build/lib/openhcs/processing/backends/pos_gen/mist 2025-10-31T17:49:43,633 copying openhcs/processing/backends/pos_gen/mist/boruvka_mst.py -> build/lib/openhcs/processing/backends/pos_gen/mist 2025-10-31T17:49:43,635 copying openhcs/processing/backends/pos_gen/mist/gpu_kernels.py -> build/lib/openhcs/processing/backends/pos_gen/mist 2025-10-31T17:49:43,637 copying openhcs/processing/backends/pos_gen/mist/mist_main.py -> build/lib/openhcs/processing/backends/pos_gen/mist 2025-10-31T17:49:43,640 copying openhcs/processing/backends/pos_gen/mist/position_reconstruction.py -> build/lib/openhcs/processing/backends/pos_gen/mist 2025-10-31T17:49:43,643 creating build/lib/openhcs/tests/generators 2025-10-31T17:49:43,644 copying openhcs/tests/generators/generate_synthetic_data.py -> build/lib/openhcs/tests/generators 2025-10-31T17:49:43,647 copying openhcs/tests/generators/__init__.py -> build/lib/openhcs/tests/generators 2025-10-31T17:49:43,650 creating build/lib/openhcs/core/pipeline 2025-10-31T17:49:43,651 copying openhcs/core/pipeline/materialization_flag_planner.py -> build/lib/openhcs/core/pipeline 2025-10-31T17:49:43,654 copying openhcs/core/pipeline/step_attribute_stripper.py -> build/lib/openhcs/core/pipeline 2025-10-31T17:49:43,656 copying openhcs/core/pipeline/pipeline_utils.py -> build/lib/openhcs/core/pipeline 2025-10-31T17:49:43,658 copying openhcs/core/pipeline/__init__.py -> build/lib/openhcs/core/pipeline 2025-10-31T17:49:43,660 copying openhcs/core/pipeline/gpu_memory_validator.py -> build/lib/openhcs/core/pipeline 2025-10-31T17:49:43,662 copying openhcs/core/pipeline/funcstep_contract_validator.py -> build/lib/openhcs/core/pipeline 2025-10-31T17:49:43,666 copying openhcs/core/pipeline/function_contracts.py -> build/lib/openhcs/core/pipeline 2025-10-31T17:49:43,668 copying openhcs/core/pipeline/path_planner.py -> build/lib/openhcs/core/pipeline 2025-10-31T17:49:43,671 copying openhcs/core/pipeline/compiler.py -> build/lib/openhcs/core/pipeline 2025-10-31T17:49:43,675 creating build/lib/openhcs/core/orchestrator 2025-10-31T17:49:43,676 copying openhcs/core/orchestrator/gpu_scheduler.py -> build/lib/openhcs/core/orchestrator 2025-10-31T17:49:43,678 copying openhcs/core/orchestrator/__init__.py -> build/lib/openhcs/core/orchestrator 2025-10-31T17:49:43,680 copying openhcs/core/orchestrator/orchestrator.py -> build/lib/openhcs/core/orchestrator 2025-10-31T17:49:43,684 creating build/lib/openhcs/core/context 2025-10-31T17:49:43,685 copying openhcs/core/context/processing_context.py -> build/lib/openhcs/core/context 2025-10-31T17:49:43,688 copying openhcs/core/context/__init__.py -> build/lib/openhcs/core/context 2025-10-31T17:49:43,690 creating build/lib/openhcs/core/steps 2025-10-31T17:49:43,691 copying openhcs/core/steps/function_step.py -> build/lib/openhcs/core/steps 2025-10-31T17:49:43,695 copying openhcs/core/steps/__init__.py -> build/lib/openhcs/core/steps 2025-10-31T17:49:43,697 copying openhcs/core/steps/abstract.py -> build/lib/openhcs/core/steps 2025-10-31T17:49:43,700 creating build/lib/openhcs/core/components 2025-10-31T17:49:43,701 copying openhcs/core/components/multiprocessing.py -> build/lib/openhcs/core/components 2025-10-31T17:49:43,704 copying openhcs/core/components/__init__.py -> build/lib/openhcs/core/components 2025-10-31T17:49:43,706 copying openhcs/core/components/metaprogramming.py -> build/lib/openhcs/core/components 2025-10-31T17:49:43,708 copying openhcs/core/components/parser_metaprogramming.py -> build/lib/openhcs/core/components 2025-10-31T17:49:43,711 copying openhcs/core/components/validation.py -> build/lib/openhcs/core/components 2025-10-31T17:49:43,714 creating build/lib/openhcs/core/memory 2025-10-31T17:49:43,715 copying openhcs/core/memory/stack_utils.py -> build/lib/openhcs/core/memory 2025-10-31T17:49:43,717 copying openhcs/core/memory/converters.py -> build/lib/openhcs/core/memory 2025-10-31T17:49:43,719 copying openhcs/core/memory/oom_recovery.py -> build/lib/openhcs/core/memory 2025-10-31T17:49:43,722 copying openhcs/core/memory/__init__.py -> build/lib/openhcs/core/memory 2025-10-31T17:49:43,724 copying openhcs/core/memory/dtype_scaling.py -> build/lib/openhcs/core/memory 2025-10-31T17:49:43,726 copying openhcs/core/memory/decorators.py -> build/lib/openhcs/core/memory 2025-10-31T17:49:43,729 copying openhcs/core/memory/utils.py -> build/lib/openhcs/core/memory 2025-10-31T17:49:43,731 copying openhcs/core/memory/slice_processing.py -> build/lib/openhcs/core/memory 2025-10-31T17:49:43,733 copying openhcs/core/memory/framework_ops.py -> build/lib/openhcs/core/memory 2025-10-31T17:49:43,735 copying openhcs/core/memory/conversion_helpers.py -> build/lib/openhcs/core/memory 2025-10-31T17:49:43,738 copying openhcs/core/memory/framework_config.py -> build/lib/openhcs/core/memory 2025-10-31T17:49:43,741 copying openhcs/core/memory/exceptions.py -> build/lib/openhcs/core/memory 2025-10-31T17:49:43,743 copying openhcs/core/memory/gpu_cleanup.py -> build/lib/openhcs/core/memory 2025-10-31T17:49:43,746 creating build/lib/openhcs/ui/shared 2025-10-31T17:49:43,748 copying openhcs/ui/shared/parameter_form_config_factory.py -> build/lib/openhcs/ui/shared 2025-10-31T17:49:43,751 copying openhcs/ui/shared/parameter_form_constants.py -> build/lib/openhcs/ui/shared 2025-10-31T17:49:43,753 copying openhcs/ui/shared/parameter_type_utils.py -> build/lib/openhcs/ui/shared 2025-10-31T17:49:43,756 copying openhcs/ui/shared/__init__.py -> build/lib/openhcs/ui/shared 2025-10-31T17:49:43,757 copying openhcs/ui/shared/system_monitor_core.py -> build/lib/openhcs/ui/shared 2025-10-31T17:49:43,760 copying openhcs/ui/shared/pattern_data_manager.py -> build/lib/openhcs/ui/shared 2025-10-31T17:49:43,762 copying openhcs/ui/shared/widget_creation_registry.py -> build/lib/openhcs/ui/shared 2025-10-31T17:49:43,764 copying openhcs/ui/shared/pattern_file_service.py -> build/lib/openhcs/ui/shared 2025-10-31T17:49:43,766 copying openhcs/ui/shared/search_service.py -> build/lib/openhcs/ui/shared 2025-10-31T17:49:43,768 copying openhcs/ui/shared/parameter_form_base.py -> build/lib/openhcs/ui/shared 2025-10-31T17:49:43,771 copying openhcs/ui/shared/ui_utils.py -> build/lib/openhcs/ui/shared 2025-10-31T17:49:43,773 copying openhcs/ui/shared/parameter_form_service.py -> build/lib/openhcs/ui/shared 2025-10-31T17:49:43,776 creating build/lib/openhcs/pyqt_gui/dialogs 2025-10-31T17:49:43,777 copying openhcs/pyqt_gui/dialogs/metadata_viewer_dialog.py -> build/lib/openhcs/pyqt_gui/dialogs 2025-10-31T17:49:43,780 copying openhcs/pyqt_gui/dialogs/group_by_selector_dialog.py -> build/lib/openhcs/pyqt_gui/dialogs 2025-10-31T17:49:43,783 copying openhcs/pyqt_gui/dialogs/function_selector_dialog.py -> build/lib/openhcs/pyqt_gui/dialogs 2025-10-31T17:49:43,786 creating build/lib/openhcs/pyqt_gui/widgets 2025-10-31T17:49:43,788 copying openhcs/pyqt_gui/widgets/log_viewer.py -> build/lib/openhcs/pyqt_gui/widgets 2025-10-31T17:49:43,792 copying openhcs/pyqt_gui/widgets/step_parameter_editor.py -> build/lib/openhcs/pyqt_gui/widgets 2025-10-31T17:49:43,795 copying openhcs/pyqt_gui/widgets/function_pane.py -> build/lib/openhcs/pyqt_gui/widgets 2025-10-31T17:49:43,797 copying openhcs/pyqt_gui/widgets/__init__.py -> build/lib/openhcs/pyqt_gui/widgets 2025-10-31T17:49:43,799 copying openhcs/pyqt_gui/widgets/system_monitor.py -> build/lib/openhcs/pyqt_gui/widgets 2025-10-31T17:49:43,802 copying openhcs/pyqt_gui/widgets/function_list_editor.py -> build/lib/openhcs/pyqt_gui/widgets 2025-10-31T17:49:43,805 copying openhcs/pyqt_gui/widgets/pipeline_editor.py -> build/lib/openhcs/pyqt_gui/widgets 2025-10-31T17:49:43,809 copying openhcs/pyqt_gui/widgets/image_browser.py -> build/lib/openhcs/pyqt_gui/widgets 2025-10-31T17:49:43,813 copying openhcs/pyqt_gui/widgets/enhanced_path_widget.py -> build/lib/openhcs/pyqt_gui/widgets 2025-10-31T17:49:43,815 copying openhcs/pyqt_gui/widgets/status_bar.py -> build/lib/openhcs/pyqt_gui/widgets 2025-10-31T17:49:43,818 copying openhcs/pyqt_gui/widgets/plate_manager.py -> build/lib/openhcs/pyqt_gui/widgets 2025-10-31T17:49:43,822 creating build/lib/openhcs/pyqt_gui/utils 2025-10-31T17:49:43,823 copying openhcs/pyqt_gui/utils/__init__.py -> build/lib/openhcs/pyqt_gui/utils 2025-10-31T17:49:43,825 copying openhcs/pyqt_gui/utils/process_tracker.py -> build/lib/openhcs/pyqt_gui/utils 2025-10-31T17:49:43,828 copying openhcs/pyqt_gui/utils/log_detection_utils.py -> build/lib/openhcs/pyqt_gui/utils 2025-10-31T17:49:43,830 copying openhcs/pyqt_gui/utils/window_utils.py -> build/lib/openhcs/pyqt_gui/utils 2025-10-31T17:49:43,832 creating build/lib/openhcs/pyqt_gui/shared 2025-10-31T17:49:43,833 copying openhcs/pyqt_gui/shared/config_validator.py -> build/lib/openhcs/pyqt_gui/shared 2025-10-31T17:49:43,836 copying openhcs/pyqt_gui/shared/__init__.py -> build/lib/openhcs/pyqt_gui/shared 2025-10-31T17:49:43,838 copying openhcs/pyqt_gui/shared/palette_manager.py -> build/lib/openhcs/pyqt_gui/shared 2025-10-31T17:49:43,840 copying openhcs/pyqt_gui/shared/color_scheme.py -> build/lib/openhcs/pyqt_gui/shared 2025-10-31T17:49:43,843 copying openhcs/pyqt_gui/shared/style_generator.py -> build/lib/openhcs/pyqt_gui/shared 2025-10-31T17:49:43,846 creating build/lib/openhcs/pyqt_gui/windows 2025-10-31T17:49:43,847 copying openhcs/pyqt_gui/windows/help_window.py -> build/lib/openhcs/pyqt_gui/windows 2025-10-31T17:49:43,850 copying openhcs/pyqt_gui/windows/base_form_dialog.py -> build/lib/openhcs/pyqt_gui/windows 2025-10-31T17:49:43,852 copying openhcs/pyqt_gui/windows/file_browser_window.py -> build/lib/openhcs/pyqt_gui/windows 2025-10-31T17:49:43,855 copying openhcs/pyqt_gui/windows/help_windows.py -> build/lib/openhcs/pyqt_gui/windows 2025-10-31T17:49:43,857 copying openhcs/pyqt_gui/windows/__init__.py -> build/lib/openhcs/pyqt_gui/windows 2025-10-31T17:49:43,859 copying openhcs/pyqt_gui/windows/plate_viewer_window.py -> build/lib/openhcs/pyqt_gui/windows 2025-10-31T17:49:43,862 copying openhcs/pyqt_gui/windows/config_window.py -> build/lib/openhcs/pyqt_gui/windows 2025-10-31T17:49:43,865 copying openhcs/pyqt_gui/windows/dual_editor_window.py -> build/lib/openhcs/pyqt_gui/windows 2025-10-31T17:49:43,868 copying openhcs/pyqt_gui/windows/synthetic_plate_generator_window.py -> build/lib/openhcs/pyqt_gui/windows 2025-10-31T17:49:43,871 creating build/lib/openhcs/pyqt_gui/services 2025-10-31T17:49:43,872 copying openhcs/pyqt_gui/services/config_cache_adapter.py -> build/lib/openhcs/pyqt_gui/services 2025-10-31T17:49:43,874 copying openhcs/pyqt_gui/services/simple_code_editor.py -> build/lib/openhcs/pyqt_gui/services 2025-10-31T17:49:43,878 copying openhcs/pyqt_gui/services/__init__.py -> build/lib/openhcs/pyqt_gui/services 2025-10-31T17:49:43,880 copying openhcs/pyqt_gui/services/service_adapter.py -> build/lib/openhcs/pyqt_gui/services 2025-10-31T17:49:43,882 copying openhcs/pyqt_gui/services/async_service_bridge.py -> build/lib/openhcs/pyqt_gui/services 2025-10-31T17:49:43,885 copying openhcs/pyqt_gui/services/persistent_system_monitor.py -> build/lib/openhcs/pyqt_gui/services 2025-10-31T17:49:43,888 creating build/lib/openhcs/pyqt_gui/widgets/shared 2025-10-31T17:49:43,889 copying openhcs/pyqt_gui/widgets/shared/widget_strategies.py -> build/lib/openhcs/pyqt_gui/widgets/shared 2025-10-31T17:49:43,892 copying openhcs/pyqt_gui/widgets/shared/zmq_server_manager.py -> build/lib/openhcs/pyqt_gui/widgets/shared 2025-10-31T17:49:43,895 copying openhcs/pyqt_gui/widgets/shared/__init__.py -> build/lib/openhcs/pyqt_gui/widgets/shared 2025-10-31T17:49:43,896 copying openhcs/pyqt_gui/widgets/shared/no_scroll_spinbox.py -> build/lib/openhcs/pyqt_gui/widgets/shared 2025-10-31T17:49:43,899 copying openhcs/pyqt_gui/widgets/shared/parameter_form_manager.py -> build/lib/openhcs/pyqt_gui/widgets/shared 2025-10-31T17:49:43,903 copying openhcs/pyqt_gui/widgets/shared/column_filter_widget.py -> build/lib/openhcs/pyqt_gui/widgets/shared 2025-10-31T17:49:43,906 copying openhcs/pyqt_gui/widgets/shared/layout_constants.py -> build/lib/openhcs/pyqt_gui/widgets/shared 2025-10-31T17:49:43,908 copying openhcs/pyqt_gui/widgets/shared/clickable_help_components.py -> build/lib/openhcs/pyqt_gui/widgets/shared 2025-10-31T17:49:43,910 copying openhcs/pyqt_gui/widgets/shared/plate_view_widget.py -> build/lib/openhcs/pyqt_gui/widgets/shared 2025-10-31T17:49:43,913 creating build/lib/openhcs/pyqt_gui/widgets/mixins 2025-10-31T17:49:43,914 copying openhcs/pyqt_gui/widgets/mixins/selection_preservation_mixin.py -> build/lib/openhcs/pyqt_gui/widgets/mixins 2025-10-31T17:49:43,916 copying openhcs/pyqt_gui/widgets/mixins/__init__.py -> build/lib/openhcs/pyqt_gui/widgets/mixins 2025-10-31T17:49:43,919 creating build/lib/openhcs/formats/pattern 2025-10-31T17:49:43,920 copying openhcs/formats/pattern/__init__.py -> build/lib/openhcs/formats/pattern 2025-10-31T17:49:43,922 copying openhcs/formats/pattern/pattern_discovery.py -> build/lib/openhcs/formats/pattern 2025-10-31T17:49:43,924 copying openhcs/formats/pattern/pattern_resolver.py -> build/lib/openhcs/formats/pattern 2025-10-31T17:49:43,927 running egg_info 2025-10-31T17:49:43,939 writing openhcs.egg-info/PKG-INFO 2025-10-31T17:49:43,970 writing dependency_links to openhcs.egg-info/dependency_links.txt 2025-10-31T17:49:43,972 writing entry points to openhcs.egg-info/entry_points.txt 2025-10-31T17:49:43,992 writing requirements to openhcs.egg-info/requires.txt 2025-10-31T17:49:43,993 writing top-level names to openhcs.egg-info/top_level.txt 2025-10-31T17:49:44,129 reading manifest file 'openhcs.egg-info/SOURCES.txt' 2025-10-31T17:49:44,159 writing manifest file 'openhcs.egg-info/SOURCES.txt' 2025-10-31T17:49:44,165 /tmp/pip-build-env-uzp5g1vf/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'openhcs.textual_tui' is absent from the `packages` configuration. 2025-10-31T17:49:44,165 !! 2025-10-31T17:49:44,166 ******************************************************************************** 2025-10-31T17:49:44,167 ############################ 2025-10-31T17:49:44,167 # Package would be ignored # 2025-10-31T17:49:44,168 ############################ 2025-10-31T17:49:44,168 Python recognizes 'openhcs.textual_tui' as an importable package[^1], 2025-10-31T17:49:44,169 but it is absent from setuptools' `packages` configuration. 2025-10-31T17:49:44,170 This leads to an ambiguous overall configuration. If you want to distribute this 2025-10-31T17:49:44,170 package, please make sure that 'openhcs.textual_tui' is explicitly added 2025-10-31T17:49:44,171 to the `packages` configuration field. 2025-10-31T17:49:44,172 Alternatively, you can also rely on setuptools' discovery methods 2025-10-31T17:49:44,172 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-10-31T17:49:44,173 instead of `find_packages(...)`/`find:`). 2025-10-31T17:49:44,174 You can read more about "package discovery" on setuptools documentation page: 2025-10-31T17:49:44,175 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-10-31T17:49:44,175 If you don't want 'openhcs.textual_tui' to be distributed and are 2025-10-31T17:49:44,176 already explicitly excluding 'openhcs.textual_tui' via 2025-10-31T17:49:44,176 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-10-31T17:49:44,176 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-10-31T17:49:44,177 combination with a more fine grained `package-data` configuration. 2025-10-31T17:49:44,178 You can read more about "package data files" on setuptools documentation page: 2025-10-31T17:49:44,178 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-10-31T17:49:44,180 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-10-31T17:49:44,180 even if it does not contain any `.py` files. 2025-10-31T17:49:44,180 On the other hand, currently there is no concept of package data 2025-10-31T17:49:44,181 directory, all directories are treated like packages. 2025-10-31T17:49:44,181 ******************************************************************************** 2025-10-31T17:49:44,182 !! 2025-10-31T17:49:44,183 check.warn(importable) 2025-10-31T17:49:44,271 creating build/lib/openhcs/textual_tui 2025-10-31T17:49:44,272 copying openhcs/textual_tui/styles.css -> build/lib/openhcs/textual_tui 2025-10-31T17:49:44,275 copying openhcs/omero/docker-compose.yml -> build/lib/openhcs/omero 2025-10-31T17:49:44,278 copying openhcs/omero/docker-compose.openhcs.yml -> build/lib/openhcs/omero 2025-10-31T17:49:44,316 installing to build/bdist.linux-armv7l/wheel 2025-10-31T17:49:44,316 running install 2025-10-31T17:49:44,339 running install_lib 2025-10-31T17:49:44,346 creating build/bdist.linux-armv7l/wheel 2025-10-31T17:49:44,348 creating build/bdist.linux-armv7l/wheel/openhcs 2025-10-31T17:49:44,350 creating build/bdist.linux-armv7l/wheel/openhcs/config_framework 2025-10-31T17:49:44,351 copying build/lib/openhcs/config_framework/config.py -> build/bdist.linux-armv7l/wheel/./openhcs/config_framework 2025-10-31T17:49:44,354 copying build/lib/openhcs/config_framework/dual_axis_resolver.py -> build/bdist.linux-armv7l/wheel/./openhcs/config_framework 2025-10-31T17:49:44,356 copying build/lib/openhcs/config_framework/context_manager.py -> build/bdist.linux-armv7l/wheel/./openhcs/config_framework 2025-10-31T17:49:44,359 copying build/lib/openhcs/config_framework/__init__.py -> build/bdist.linux-armv7l/wheel/./openhcs/config_framework 2025-10-31T17:49:44,361 copying build/lib/openhcs/config_framework/global_config.py -> build/bdist.linux-armv7l/wheel/./openhcs/config_framework 2025-10-31T17:49:44,363 copying build/lib/openhcs/config_framework/cache_warming.py -> build/bdist.linux-armv7l/wheel/./openhcs/config_framework 2025-10-31T17:49:44,366 copying build/lib/openhcs/config_framework/placeholder.py -> build/bdist.linux-armv7l/wheel/./openhcs/config_framework 2025-10-31T17:49:44,368 copying build/lib/openhcs/config_framework/lazy_factory.py -> build/bdist.linux-armv7l/wheel/./openhcs/config_framework 2025-10-31T17:49:44,373 creating build/bdist.linux-armv7l/wheel/openhcs/validation 2025-10-31T17:49:44,374 copying build/lib/openhcs/validation/__init__.py -> build/bdist.linux-armv7l/wheel/./openhcs/validation 2025-10-31T17:49:44,376 copying build/lib/openhcs/validation/ast_validator.py -> build/bdist.linux-armv7l/wheel/./openhcs/validation 2025-10-31T17:49:44,379 copying build/lib/openhcs/validation/validate.py -> build/bdist.linux-armv7l/wheel/./openhcs/validation 2025-10-31T17:49:44,382 creating build/bdist.linux-armv7l/wheel/openhcs/processing 2025-10-31T17:49:44,383 creating build/bdist.linux-armv7l/wheel/openhcs/processing/presets 2025-10-31T17:49:44,385 creating build/bdist.linux-armv7l/wheel/openhcs/processing/presets/pipelines 2025-10-31T17:49:44,386 copying build/lib/openhcs/processing/presets/pipelines/cy5_ctb_cell_count.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/presets/pipelines 2025-10-31T17:49:44,388 copying build/lib/openhcs/processing/presets/pipelines/10x_mfd_crop_analyze_dapi-fitc-cy5.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/presets/pipelines 2025-10-31T17:49:44,390 copying build/lib/openhcs/processing/presets/pipelines/10x_mfd_stitch_ashlar_cpu.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/presets/pipelines 2025-10-31T17:49:44,392 copying build/lib/openhcs/processing/presets/pipelines/imx_96_well_neurite_outgrowth_pipeline_cpu.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/presets/pipelines 2025-10-31T17:49:44,394 copying build/lib/openhcs/processing/presets/pipelines/cy5_axon_cell_body_crop_analysis.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/presets/pipelines 2025-10-31T17:49:44,396 copying build/lib/openhcs/processing/presets/pipelines/imx_96_well_neurite_outgrowth_pipeline_gpu.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/presets/pipelines 2025-10-31T17:49:44,398 copying build/lib/openhcs/processing/presets/pipelines/10x_mfd_stitch_gpu.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/presets/pipelines 2025-10-31T17:49:44,400 copying build/lib/openhcs/processing/presets/pipelines/test.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/presets/pipelines 2025-10-31T17:49:44,402 copying build/lib/openhcs/processing/presets/pipelines/10x_mfd_crop_analyze.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/presets/pipelines 2025-10-31T17:49:44,404 copying build/lib/openhcs/processing/presets/__init__.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/presets 2025-10-31T17:49:44,406 copying build/lib/openhcs/processing/__init__.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing 2025-10-31T17:49:44,409 creating build/bdist.linux-armv7l/wheel/openhcs/processing/backends 2025-10-31T17:49:44,411 creating build/bdist.linux-armv7l/wheel/openhcs/processing/backends/lib_registry 2025-10-31T17:49:44,412 copying build/lib/openhcs/processing/backends/lib_registry/unified_registry.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/lib_registry 2025-10-31T17:49:44,415 copying build/lib/openhcs/processing/backends/lib_registry/openhcs_registry.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/lib_registry 2025-10-31T17:49:44,417 copying build/lib/openhcs/processing/backends/lib_registry/registry_service.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/lib_registry 2025-10-31T17:49:44,419 copying build/lib/openhcs/processing/backends/lib_registry/pyclesperanto_registry.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/lib_registry 2025-10-31T17:49:44,421 copying build/lib/openhcs/processing/backends/lib_registry/scikit_image_registry.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/lib_registry 2025-10-31T17:49:44,423 copying build/lib/openhcs/processing/backends/lib_registry/cupy_registry.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/lib_registry 2025-10-31T17:49:44,425 creating build/bdist.linux-armv7l/wheel/openhcs/processing/backends/assemblers 2025-10-31T17:49:44,426 copying build/lib/openhcs/processing/backends/assemblers/__init__.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/assemblers 2025-10-31T17:49:44,428 copying build/lib/openhcs/processing/backends/assemblers/self_supervised_stitcher.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/assemblers 2025-10-31T17:49:44,431 copying build/lib/openhcs/processing/backends/assemblers/assemble_stack_cupy.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/assemblers 2025-10-31T17:49:44,434 copying build/lib/openhcs/processing/backends/assemblers/assemble_stack_cpu.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/assemblers 2025-10-31T17:49:44,437 creating build/bdist.linux-armv7l/wheel/openhcs/processing/backends/enhance 2025-10-31T17:49:44,438 copying build/lib/openhcs/processing/backends/enhance/dl_edof_unsupervised.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/enhance 2025-10-31T17:49:44,440 copying build/lib/openhcs/processing/backends/enhance/__init__.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/enhance 2025-10-31T17:49:44,442 copying build/lib/openhcs/processing/backends/enhance/self_supervised_2d_deconvolution.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/enhance 2025-10-31T17:49:44,444 copying build/lib/openhcs/processing/backends/enhance/basic_processor_cupy.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/enhance 2025-10-31T17:49:44,447 copying build/lib/openhcs/processing/backends/enhance/basic_processor_jax.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/enhance 2025-10-31T17:49:44,449 copying build/lib/openhcs/processing/backends/enhance/torch_nlm_processor.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/enhance 2025-10-31T17:49:44,451 copying build/lib/openhcs/processing/backends/enhance/jax_nlm_processor.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/enhance 2025-10-31T17:49:44,453 copying build/lib/openhcs/processing/backends/enhance/basic_processor_numpy.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/enhance 2025-10-31T17:49:44,455 copying build/lib/openhcs/processing/backends/enhance/n2v2_processor_torch.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/enhance 2025-10-31T17:49:44,458 copying build/lib/openhcs/processing/backends/enhance/cupy_clahe.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/enhance 2025-10-31T17:49:44,461 copying build/lib/openhcs/processing/backends/enhance/self_supervised_3d_deconvolution.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/enhance 2025-10-31T17:49:44,463 copying build/lib/openhcs/processing/backends/enhance/focus_torch.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/enhance 2025-10-31T17:49:44,466 creating build/bdist.linux-armv7l/wheel/openhcs/processing/backends/analysis 2025-10-31T17:49:44,467 copying build/lib/openhcs/processing/backends/analysis/self_supervised_segmentation_3d.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/analysis 2025-10-31T17:49:44,469 copying build/lib/openhcs/processing/backends/analysis/cell_counting_cpu.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/analysis 2025-10-31T17:49:44,472 copying build/lib/openhcs/processing/backends/analysis/cache_utils.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/analysis 2025-10-31T17:49:44,475 copying build/lib/openhcs/processing/backends/analysis/cx5_format.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/analysis 2025-10-31T17:49:44,477 copying build/lib/openhcs/processing/backends/analysis/hmm_axon_torbi.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/analysis 2025-10-31T17:49:44,480 copying build/lib/openhcs/processing/backends/analysis/consolidate_analysis_results.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/analysis 2025-10-31T17:49:44,482 copying build/lib/openhcs/processing/backends/analysis/__init__.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/analysis 2025-10-31T17:49:44,484 copying build/lib/openhcs/processing/backends/analysis/consolidate_special_outputs.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/analysis 2025-10-31T17:49:44,487 copying build/lib/openhcs/processing/backends/analysis/hmm_axon.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/analysis 2025-10-31T17:49:44,489 copying build/lib/openhcs/processing/backends/analysis/cell_counting_pyclesperanto.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/analysis 2025-10-31T17:49:44,492 copying build/lib/openhcs/processing/backends/analysis/skan_axon_analysis.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/analysis 2025-10-31T17:49:44,495 copying build/lib/openhcs/processing/backends/analysis/dxf_mask_pipeline.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/analysis 2025-10-31T17:49:44,497 copying build/lib/openhcs/processing/backends/analysis/focus_analyzer.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/analysis 2025-10-31T17:49:44,500 copying build/lib/openhcs/processing/backends/analysis/multi_template_matching.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/analysis 2025-10-31T17:49:44,502 copying build/lib/openhcs/processing/backends/analysis/straighten_object_3d.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/analysis 2025-10-31T17:49:44,505 copying build/lib/openhcs/processing/backends/analysis/cell_counting_cupy.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/analysis 2025-10-31T17:49:44,508 copying build/lib/openhcs/processing/backends/__init__.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends 2025-10-31T17:49:44,510 creating build/bdist.linux-armv7l/wheel/openhcs/processing/backends/experimental_analysis 2025-10-31T17:49:44,511 copying build/lib/openhcs/processing/backends/experimental_analysis/metaxpress_registry.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/experimental_analysis 2025-10-31T17:49:44,513 copying build/lib/openhcs/processing/backends/experimental_analysis/__init__.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/experimental_analysis 2025-10-31T17:49:44,515 copying build/lib/openhcs/processing/backends/experimental_analysis/format_registry_service.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/experimental_analysis 2025-10-31T17:49:44,517 copying build/lib/openhcs/processing/backends/experimental_analysis/unified_analysis_engine.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/experimental_analysis 2025-10-31T17:49:44,520 copying build/lib/openhcs/processing/backends/experimental_analysis/cx5_registry.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/experimental_analysis 2025-10-31T17:49:44,522 copying build/lib/openhcs/processing/backends/experimental_analysis/format_registry.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/experimental_analysis 2025-10-31T17:49:44,525 creating build/bdist.linux-armv7l/wheel/openhcs/processing/backends/processors 2025-10-31T17:49:44,526 copying build/lib/openhcs/processing/backends/processors/torch_processor.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/processors 2025-10-31T17:49:44,529 copying build/lib/openhcs/processing/backends/processors/cupy_processor.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/processors 2025-10-31T17:49:44,532 copying build/lib/openhcs/processing/backends/processors/tensorflow_processor.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/processors 2025-10-31T17:49:44,535 copying build/lib/openhcs/processing/backends/processors/pyclesperanto_processor.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/processors 2025-10-31T17:49:44,538 copying build/lib/openhcs/processing/backends/processors/__init__.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/processors 2025-10-31T17:49:44,540 copying build/lib/openhcs/processing/backends/processors/numpy_processor.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/processors 2025-10-31T17:49:44,542 copying build/lib/openhcs/processing/backends/processors/percentile_utils.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/processors 2025-10-31T17:49:44,545 copying build/lib/openhcs/processing/backends/processors/jax_processor.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/processors 2025-10-31T17:49:44,548 creating build/bdist.linux-armv7l/wheel/openhcs/processing/backends/pos_gen 2025-10-31T17:49:44,549 copying build/lib/openhcs/processing/backends/pos_gen/ashlar_main_cpu.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/pos_gen 2025-10-31T17:49:44,552 copying build/lib/openhcs/processing/backends/pos_gen/__init__.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/pos_gen 2025-10-31T17:49:44,554 creating build/bdist.linux-armv7l/wheel/openhcs/processing/backends/pos_gen/mist 2025-10-31T17:49:44,555 copying build/lib/openhcs/processing/backends/pos_gen/mist/phase_correlation.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/pos_gen/mist 2025-10-31T17:49:44,558 copying build/lib/openhcs/processing/backends/pos_gen/mist/__init__.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/pos_gen/mist 2025-10-31T17:49:44,560 copying build/lib/openhcs/processing/backends/pos_gen/mist/quality_metrics.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/pos_gen/mist 2025-10-31T17:49:44,562 copying build/lib/openhcs/processing/backends/pos_gen/mist/boruvka_mst.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/pos_gen/mist 2025-10-31T17:49:44,564 copying build/lib/openhcs/processing/backends/pos_gen/mist/gpu_kernels.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/pos_gen/mist 2025-10-31T17:49:44,566 copying build/lib/openhcs/processing/backends/pos_gen/mist/mist_main.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/pos_gen/mist 2025-10-31T17:49:44,569 copying build/lib/openhcs/processing/backends/pos_gen/mist/position_reconstruction.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/pos_gen/mist 2025-10-31T17:49:44,572 copying build/lib/openhcs/processing/backends/pos_gen/mist_processor_cupy.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/pos_gen 2025-10-31T17:49:44,574 copying build/lib/openhcs/processing/backends/pos_gen/ashlar_main_gpu.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing/backends/pos_gen 2025-10-31T17:49:44,577 copying build/lib/openhcs/processing/func_registry.py -> build/bdist.linux-armv7l/wheel/./openhcs/processing 2025-10-31T17:49:44,580 creating build/bdist.linux-armv7l/wheel/openhcs/microscopes 2025-10-31T17:49:44,581 copying build/lib/openhcs/microscopes/opera_phenix.py -> build/bdist.linux-armv7l/wheel/./openhcs/microscopes 2025-10-31T17:49:44,584 copying build/lib/openhcs/microscopes/__init__.py -> build/bdist.linux-armv7l/wheel/./openhcs/microscopes 2025-10-31T17:49:44,586 copying build/lib/openhcs/microscopes/imagexpress.py -> build/bdist.linux-armv7l/wheel/./openhcs/microscopes 2025-10-31T17:49:44,589 copying build/lib/openhcs/microscopes/handler_registry_service.py -> build/bdist.linux-armv7l/wheel/./openhcs/microscopes 2025-10-31T17:49:44,591 copying build/lib/openhcs/microscopes/opera_phenix_xml_parser.py -> build/bdist.linux-armv7l/wheel/./openhcs/microscopes 2025-10-31T17:49:44,594 copying build/lib/openhcs/microscopes/omero.py -> build/bdist.linux-armv7l/wheel/./openhcs/microscopes 2025-10-31T17:49:44,597 copying build/lib/openhcs/microscopes/microscope_base.py -> build/bdist.linux-armv7l/wheel/./openhcs/microscopes 2025-10-31T17:49:44,599 copying build/lib/openhcs/microscopes/microscope_interfaces.py -> build/bdist.linux-armv7l/wheel/./openhcs/microscopes 2025-10-31T17:49:44,602 copying build/lib/openhcs/microscopes/openhcs.py -> build/bdist.linux-armv7l/wheel/./openhcs/microscopes 2025-10-31T17:49:44,606 creating build/bdist.linux-armv7l/wheel/openhcs/io 2025-10-31T17:49:44,607 copying build/lib/openhcs/io/disk.py -> build/bdist.linux-armv7l/wheel/./openhcs/io 2025-10-31T17:49:44,610 copying build/lib/openhcs/io/metadata_writer.py -> build/bdist.linux-armv7l/wheel/./openhcs/io 2025-10-31T17:49:44,613 copying build/lib/openhcs/io/streaming.py -> build/bdist.linux-armv7l/wheel/./openhcs/io 2025-10-31T17:49:44,615 copying build/lib/openhcs/io/async_init.py -> build/bdist.linux-armv7l/wheel/./openhcs/io 2025-10-31T17:49:44,617 copying build/lib/openhcs/io/filemanager.py -> build/bdist.linux-armv7l/wheel/./openhcs/io 2025-10-31T17:49:44,620 copying build/lib/openhcs/io/pipeline_migration.py -> build/bdist.linux-armv7l/wheel/./openhcs/io 2025-10-31T17:49:44,622 copying build/lib/openhcs/io/__init__.py -> build/bdist.linux-armv7l/wheel/./openhcs/io 2025-10-31T17:49:44,624 copying build/lib/openhcs/io/napari_stream.py -> build/bdist.linux-armv7l/wheel/./openhcs/io 2025-10-31T17:49:44,627 copying build/lib/openhcs/io/fiji_stream.py -> build/bdist.linux-armv7l/wheel/./openhcs/io 2025-10-31T17:49:44,629 copying build/lib/openhcs/io/backend_registry.py -> build/bdist.linux-armv7l/wheel/./openhcs/io 2025-10-31T17:49:44,631 copying build/lib/openhcs/io/base.py -> build/bdist.linux-armv7l/wheel/./openhcs/io 2025-10-31T17:49:44,633 copying build/lib/openhcs/io/zarr.py -> build/bdist.linux-armv7l/wheel/./openhcs/io 2025-10-31T17:49:44,637 copying build/lib/openhcs/io/omero_local.py -> build/bdist.linux-armv7l/wheel/./openhcs/io 2025-10-31T17:49:44,640 copying build/lib/openhcs/io/exceptions.py -> build/bdist.linux-armv7l/wheel/./openhcs/io 2025-10-31T17:49:44,641 copying build/lib/openhcs/io/memory.py -> build/bdist.linux-armv7l/wheel/./openhcs/io 2025-10-31T17:49:44,644 copying build/lib/openhcs/io/virtual_workspace.py -> build/bdist.linux-armv7l/wheel/./openhcs/io 2025-10-31T17:49:44,646 copying build/lib/openhcs/io/metadata_migration.py -> build/bdist.linux-armv7l/wheel/./openhcs/io 2025-10-31T17:49:44,649 copying build/lib/openhcs/io/atomic.py -> build/bdist.linux-armv7l/wheel/./openhcs/io 2025-10-31T17:49:44,651 creating build/bdist.linux-armv7l/wheel/openhcs/debug 2025-10-31T17:49:44,652 copying build/lib/openhcs/debug/example_export_clean.py -> build/bdist.linux-armv7l/wheel/./openhcs/debug 2025-10-31T17:49:44,655 copying build/lib/openhcs/debug/pickle_to_python.py -> build/bdist.linux-armv7l/wheel/./openhcs/debug 2025-10-31T17:49:44,658 copying build/lib/openhcs/debug/example_export.py -> build/bdist.linux-armv7l/wheel/./openhcs/debug 2025-10-31T17:49:44,660 copying build/lib/openhcs/debug/__init__.py -> build/bdist.linux-armv7l/wheel/./openhcs/debug 2025-10-31T17:49:44,662 copying build/lib/openhcs/debug/export.py -> build/bdist.linux-armv7l/wheel/./openhcs/debug 2025-10-31T17:49:44,665 creating build/bdist.linux-armv7l/wheel/openhcs/tests 2025-10-31T17:49:44,666 creating build/bdist.linux-armv7l/wheel/openhcs/tests/generators 2025-10-31T17:49:44,667 copying build/lib/openhcs/tests/generators/generate_synthetic_data.py -> build/bdist.linux-armv7l/wheel/./openhcs/tests/generators 2025-10-31T17:49:44,670 copying build/lib/openhcs/tests/generators/__init__.py -> build/bdist.linux-armv7l/wheel/./openhcs/tests/generators 2025-10-31T17:49:44,672 copying build/lib/openhcs/tests/__init__.py -> build/bdist.linux-armv7l/wheel/./openhcs/tests 2025-10-31T17:49:44,673 copying build/lib/openhcs/tests/basic_pipeline.py -> build/bdist.linux-armv7l/wheel/./openhcs/tests 2025-10-31T17:49:44,676 copying build/lib/openhcs/tests/test_pipeline.py -> build/bdist.linux-armv7l/wheel/./openhcs/tests 2025-10-31T17:49:44,677 copying build/lib/openhcs/__init__.py -> build/bdist.linux-armv7l/wheel/./openhcs 2025-10-31T17:49:44,680 creating build/bdist.linux-armv7l/wheel/openhcs/core 2025-10-31T17:49:44,682 creating build/bdist.linux-armv7l/wheel/openhcs/core/pipeline 2025-10-31T17:49:44,683 copying build/lib/openhcs/core/pipeline/materialization_flag_planner.py -> build/bdist.linux-armv7l/wheel/./openhcs/core/pipeline 2025-10-31T17:49:44,686 copying build/lib/openhcs/core/pipeline/step_attribute_stripper.py -> build/bdist.linux-armv7l/wheel/./openhcs/core/pipeline 2025-10-31T17:49:44,688 copying build/lib/openhcs/core/pipeline/pipeline_utils.py -> build/bdist.linux-armv7l/wheel/./openhcs/core/pipeline 2025-10-31T17:49:44,690 copying build/lib/openhcs/core/pipeline/__init__.py -> build/bdist.linux-armv7l/wheel/./openhcs/core/pipeline 2025-10-31T17:49:44,692 copying build/lib/openhcs/core/pipeline/gpu_memory_validator.py -> build/bdist.linux-armv7l/wheel/./openhcs/core/pipeline 2025-10-31T17:49:44,695 copying build/lib/openhcs/core/pipeline/funcstep_contract_validator.py -> build/bdist.linux-armv7l/wheel/./openhcs/core/pipeline 2025-10-31T17:49:44,697 copying build/lib/openhcs/core/pipeline/function_contracts.py -> build/bdist.linux-armv7l/wheel/./openhcs/core/pipeline 2025-10-31T17:49:44,699 copying build/lib/openhcs/core/pipeline/path_planner.py -> build/bdist.linux-armv7l/wheel/./openhcs/core/pipeline 2025-10-31T17:49:44,702 copying build/lib/openhcs/core/pipeline/compiler.py -> build/bdist.linux-armv7l/wheel/./openhcs/core/pipeline 2025-10-31T17:49:44,706 copying build/lib/openhcs/core/config.py -> build/bdist.linux-armv7l/wheel/./openhcs/core 2025-10-31T17:49:44,708 copying build/lib/openhcs/core/log_utils.py -> build/bdist.linux-armv7l/wheel/./openhcs/core 2025-10-31T17:49:44,711 copying build/lib/openhcs/core/xdg_paths.py -> build/bdist.linux-armv7l/wheel/./openhcs/core 2025-10-31T17:49:44,713 copying build/lib/openhcs/core/lazy_placeholder.py -> build/bdist.linux-armv7l/wheel/./openhcs/core 2025-10-31T17:49:44,715 copying build/lib/openhcs/core/__init__.py -> build/bdist.linux-armv7l/wheel/./openhcs/core 2025-10-31T17:49:44,717 copying build/lib/openhcs/core/utils.py -> build/bdist.linux-armv7l/wheel/./openhcs/core 2025-10-31T17:49:44,719 copying build/lib/openhcs/core/config_cache.py -> build/bdist.linux-armv7l/wheel/./openhcs/core 2025-10-31T17:49:44,722 copying build/lib/openhcs/core/roi.py -> build/bdist.linux-armv7l/wheel/./openhcs/core 2025-10-31T17:49:44,724 copying build/lib/openhcs/core/lazy_placeholder_simplified.py -> build/bdist.linux-armv7l/wheel/./openhcs/core 2025-10-31T17:49:44,727 creating build/bdist.linux-armv7l/wheel/openhcs/core/orchestrator 2025-10-31T17:49:44,728 copying build/lib/openhcs/core/orchestrator/gpu_scheduler.py -> build/bdist.linux-armv7l/wheel/./openhcs/core/orchestrator 2025-10-31T17:49:44,731 copying build/lib/openhcs/core/orchestrator/__init__.py -> build/bdist.linux-armv7l/wheel/./openhcs/core/orchestrator 2025-10-31T17:49:44,733 copying build/lib/openhcs/core/orchestrator/orchestrator.py -> build/bdist.linux-armv7l/wheel/./openhcs/core/orchestrator 2025-10-31T17:49:44,736 copying build/lib/openhcs/core/metadata_cache.py -> build/bdist.linux-armv7l/wheel/./openhcs/core 2025-10-31T17:49:44,738 copying build/lib/openhcs/core/path_cache.py -> build/bdist.linux-armv7l/wheel/./openhcs/core 2025-10-31T17:49:44,741 copying build/lib/openhcs/core/lazy_gpu_imports.py -> build/bdist.linux-armv7l/wheel/./openhcs/core 2025-10-31T17:49:44,743 copying build/lib/openhcs/core/streaming_config_factory.py -> build/bdist.linux-armv7l/wheel/./openhcs/core 2025-10-31T17:49:44,745 copying build/lib/openhcs/core/registry_discovery.py -> build/bdist.linux-armv7l/wheel/./openhcs/core 2025-10-31T17:49:44,748 creating build/bdist.linux-armv7l/wheel/openhcs/core/context 2025-10-31T17:49:44,749 copying build/lib/openhcs/core/context/processing_context.py -> build/bdist.linux-armv7l/wheel/./openhcs/core/context 2025-10-31T17:49:44,751 copying build/lib/openhcs/core/context/__init__.py -> build/bdist.linux-armv7l/wheel/./openhcs/core/context 2025-10-31T17:49:44,754 creating build/bdist.linux-armv7l/wheel/openhcs/core/steps 2025-10-31T17:49:44,755 copying build/lib/openhcs/core/steps/function_step.py -> build/bdist.linux-armv7l/wheel/./openhcs/core/steps 2025-10-31T17:49:44,758 copying build/lib/openhcs/core/steps/__init__.py -> build/bdist.linux-armv7l/wheel/./openhcs/core/steps 2025-10-31T17:49:44,760 copying build/lib/openhcs/core/steps/abstract.py -> build/bdist.linux-armv7l/wheel/./openhcs/core/steps 2025-10-31T17:49:44,763 creating build/bdist.linux-armv7l/wheel/openhcs/core/components 2025-10-31T17:49:44,764 copying build/lib/openhcs/core/components/multiprocessing.py -> build/bdist.linux-armv7l/wheel/./openhcs/core/components 2025-10-31T17:49:44,766 copying build/lib/openhcs/core/components/__init__.py -> build/bdist.linux-armv7l/wheel/./openhcs/core/components 2025-10-31T17:49:44,768 copying build/lib/openhcs/core/components/metaprogramming.py -> build/bdist.linux-armv7l/wheel/./openhcs/core/components 2025-10-31T17:49:44,771 copying build/lib/openhcs/core/components/parser_metaprogramming.py -> build/bdist.linux-armv7l/wheel/./openhcs/core/components 2025-10-31T17:49:44,773 copying build/lib/openhcs/core/components/validation.py -> build/bdist.linux-armv7l/wheel/./openhcs/core/components 2025-10-31T17:49:44,776 creating build/bdist.linux-armv7l/wheel/openhcs/core/memory 2025-10-31T17:49:44,777 copying build/lib/openhcs/core/memory/stack_utils.py -> build/bdist.linux-armv7l/wheel/./openhcs/core/memory 2025-10-31T17:49:44,780 copying build/lib/openhcs/core/memory/converters.py -> build/bdist.linux-armv7l/wheel/./openhcs/core/memory 2025-10-31T17:49:44,782 copying build/lib/openhcs/core/memory/oom_recovery.py -> build/bdist.linux-armv7l/wheel/./openhcs/core/memory 2025-10-31T17:49:44,784 copying build/lib/openhcs/core/memory/__init__.py -> build/bdist.linux-armv7l/wheel/./openhcs/core/memory 2025-10-31T17:49:44,786 copying build/lib/openhcs/core/memory/dtype_scaling.py -> build/bdist.linux-armv7l/wheel/./openhcs/core/memory 2025-10-31T17:49:44,788 copying build/lib/openhcs/core/memory/decorators.py -> build/bdist.linux-armv7l/wheel/./openhcs/core/memory 2025-10-31T17:49:44,790 copying build/lib/openhcs/core/memory/utils.py -> build/bdist.linux-armv7l/wheel/./openhcs/core/memory 2025-10-31T17:49:44,793 copying build/lib/openhcs/core/memory/slice_processing.py -> build/bdist.linux-armv7l/wheel/./openhcs/core/memory 2025-10-31T17:49:44,795 copying build/lib/openhcs/core/memory/framework_ops.py -> build/bdist.linux-armv7l/wheel/./openhcs/core/memory 2025-10-31T17:49:44,797 copying build/lib/openhcs/core/memory/conversion_helpers.py -> build/bdist.linux-armv7l/wheel/./openhcs/core/memory 2025-10-31T17:49:44,799 copying build/lib/openhcs/core/memory/framework_config.py -> build/bdist.linux-armv7l/wheel/./openhcs/core/memory 2025-10-31T17:49:44,801 copying build/lib/openhcs/core/memory/exceptions.py -> build/bdist.linux-armv7l/wheel/./openhcs/core/memory 2025-10-31T17:49:44,803 copying build/lib/openhcs/core/memory/gpu_cleanup.py -> build/bdist.linux-armv7l/wheel/./openhcs/core/memory 2025-10-31T17:49:44,806 creating build/bdist.linux-armv7l/wheel/openhcs/introspection 2025-10-31T17:49:44,807 copying build/lib/openhcs/introspection/unified_parameter_analyzer.py -> build/bdist.linux-armv7l/wheel/./openhcs/introspection 2025-10-31T17:49:44,810 copying build/lib/openhcs/introspection/__init__.py -> build/bdist.linux-armv7l/wheel/./openhcs/introspection 2025-10-31T17:49:44,812 copying build/lib/openhcs/introspection/signature_analyzer.py -> build/bdist.linux-armv7l/wheel/./openhcs/introspection 2025-10-31T17:49:44,815 creating build/bdist.linux-armv7l/wheel/openhcs/omero 2025-10-31T17:49:44,817 copying build/lib/openhcs/omero/docker-compose.yml -> build/bdist.linux-armv7l/wheel/./openhcs/omero 2025-10-31T17:49:44,819 copying build/lib/openhcs/omero/__init__.py -> build/bdist.linux-armv7l/wheel/./openhcs/omero 2025-10-31T17:49:44,821 copying build/lib/openhcs/omero/docker-compose.openhcs.yml -> build/bdist.linux-armv7l/wheel/./openhcs/omero 2025-10-31T17:49:44,823 creating build/bdist.linux-armv7l/wheel/openhcs/ui 2025-10-31T17:49:44,825 creating build/bdist.linux-armv7l/wheel/openhcs/ui/shared 2025-10-31T17:49:44,826 copying build/lib/openhcs/ui/shared/parameter_form_config_factory.py -> build/bdist.linux-armv7l/wheel/./openhcs/ui/shared 2025-10-31T17:49:44,829 copying build/lib/openhcs/ui/shared/parameter_form_constants.py -> build/bdist.linux-armv7l/wheel/./openhcs/ui/shared 2025-10-31T17:49:44,831 copying build/lib/openhcs/ui/shared/parameter_type_utils.py -> build/bdist.linux-armv7l/wheel/./openhcs/ui/shared 2025-10-31T17:49:44,833 copying build/lib/openhcs/ui/shared/__init__.py -> build/bdist.linux-armv7l/wheel/./openhcs/ui/shared 2025-10-31T17:49:44,835 copying build/lib/openhcs/ui/shared/system_monitor_core.py -> build/bdist.linux-armv7l/wheel/./openhcs/ui/shared 2025-10-31T17:49:44,838 copying build/lib/openhcs/ui/shared/pattern_data_manager.py -> build/bdist.linux-armv7l/wheel/./openhcs/ui/shared 2025-10-31T17:49:44,840 copying build/lib/openhcs/ui/shared/widget_creation_registry.py -> build/bdist.linux-armv7l/wheel/./openhcs/ui/shared 2025-10-31T17:49:44,842 copying build/lib/openhcs/ui/shared/pattern_file_service.py -> build/bdist.linux-armv7l/wheel/./openhcs/ui/shared 2025-10-31T17:49:44,844 copying build/lib/openhcs/ui/shared/search_service.py -> build/bdist.linux-armv7l/wheel/./openhcs/ui/shared 2025-10-31T17:49:44,846 copying build/lib/openhcs/ui/shared/parameter_form_base.py -> build/bdist.linux-armv7l/wheel/./openhcs/ui/shared 2025-10-31T17:49:44,848 copying build/lib/openhcs/ui/shared/ui_utils.py -> build/bdist.linux-armv7l/wheel/./openhcs/ui/shared 2025-10-31T17:49:44,850 copying build/lib/openhcs/ui/shared/parameter_form_service.py -> build/bdist.linux-armv7l/wheel/./openhcs/ui/shared 2025-10-31T17:49:44,853 creating build/bdist.linux-armv7l/wheel/openhcs/runtime 2025-10-31T17:49:44,854 copying build/lib/openhcs/runtime/omero_instance_manager.py -> build/bdist.linux-armv7l/wheel/./openhcs/runtime 2025-10-31T17:49:44,857 copying build/lib/openhcs/runtime/fiji_viewer_server.py -> build/bdist.linux-armv7l/wheel/./openhcs/runtime 2025-10-31T17:49:44,860 copying build/lib/openhcs/runtime/fiji_stream_visualizer.py -> build/bdist.linux-armv7l/wheel/./openhcs/runtime 2025-10-31T17:49:44,863 copying build/lib/openhcs/runtime/zmq_execution_server_launcher.py -> build/bdist.linux-armv7l/wheel/./openhcs/runtime 2025-10-31T17:49:44,865 copying build/lib/openhcs/runtime/remote_orchestrator.py -> build/bdist.linux-armv7l/wheel/./openhcs/runtime 2025-10-31T17:49:44,867 copying build/lib/openhcs/runtime/zmq_execution_client.py -> build/bdist.linux-armv7l/wheel/./openhcs/runtime 2025-10-31T17:49:44,869 copying build/lib/openhcs/runtime/zmq_messages.py -> build/bdist.linux-armv7l/wheel/./openhcs/runtime 2025-10-31T17:49:44,872 copying build/lib/openhcs/runtime/execution_server.py -> build/bdist.linux-armv7l/wheel/./openhcs/runtime 2025-10-31T17:49:44,875 copying build/lib/openhcs/runtime/napari_stream_visualizer.py -> build/bdist.linux-armv7l/wheel/./openhcs/runtime 2025-10-31T17:49:44,879 copying build/lib/openhcs/runtime/queue_tracker.py -> build/bdist.linux-armv7l/wheel/./openhcs/runtime 2025-10-31T17:49:44,881 copying build/lib/openhcs/runtime/zmq_base.py -> build/bdist.linux-armv7l/wheel/./openhcs/runtime 2025-10-31T17:49:44,884 copying build/lib/openhcs/runtime/zmq_execution_server.py -> build/bdist.linux-armv7l/wheel/./openhcs/runtime 2025-10-31T17:49:44,887 copying build/lib/openhcs/runtime/roi_converters.py -> build/bdist.linux-armv7l/wheel/./openhcs/runtime 2025-10-31T17:49:44,890 creating build/bdist.linux-armv7l/wheel/openhcs/constants 2025-10-31T17:49:44,891 copying build/lib/openhcs/constants/streaming.py -> build/bdist.linux-armv7l/wheel/./openhcs/constants 2025-10-31T17:49:44,893 copying build/lib/openhcs/constants/__init__.py -> build/bdist.linux-armv7l/wheel/./openhcs/constants 2025-10-31T17:49:44,895 copying build/lib/openhcs/constants/input_source.py -> build/bdist.linux-armv7l/wheel/./openhcs/constants 2025-10-31T17:49:44,897 copying build/lib/openhcs/constants/constants.py -> build/bdist.linux-armv7l/wheel/./openhcs/constants 2025-10-31T17:49:44,900 creating build/bdist.linux-armv7l/wheel/openhcs/utils 2025-10-31T17:49:44,901 copying build/lib/openhcs/utils/environment.py -> build/bdist.linux-armv7l/wheel/./openhcs/utils 2025-10-31T17:49:44,903 copying build/lib/openhcs/utils/recache_function_registry.py -> build/bdist.linux-armv7l/wheel/./openhcs/utils 2025-10-31T17:49:44,906 copying build/lib/openhcs/utils/performance_monitor.py -> build/bdist.linux-armv7l/wheel/./openhcs/utils 2025-10-31T17:49:44,909 copying build/lib/openhcs/utils/enum_factory.py -> build/bdist.linux-armv7l/wheel/./openhcs/utils 2025-10-31T17:49:44,911 copying build/lib/openhcs/utils/import_utils.py -> build/bdist.linux-armv7l/wheel/./openhcs/utils 2025-10-31T17:49:44,913 copying build/lib/openhcs/utils/display_config_factory.py -> build/bdist.linux-armv7l/wheel/./openhcs/utils 2025-10-31T17:49:44,916 creating build/bdist.linux-armv7l/wheel/openhcs/pyqt_gui 2025-10-31T17:49:44,917 copying build/lib/openhcs/pyqt_gui/app.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui 2025-10-31T17:49:44,919 copying build/lib/openhcs/pyqt_gui/config.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui 2025-10-31T17:49:44,922 creating build/bdist.linux-armv7l/wheel/openhcs/pyqt_gui/dialogs 2025-10-31T17:49:44,923 copying build/lib/openhcs/pyqt_gui/dialogs/metadata_viewer_dialog.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/dialogs 2025-10-31T17:49:44,926 copying build/lib/openhcs/pyqt_gui/dialogs/group_by_selector_dialog.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/dialogs 2025-10-31T17:49:44,928 copying build/lib/openhcs/pyqt_gui/dialogs/function_selector_dialog.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/dialogs 2025-10-31T17:49:44,932 creating build/bdist.linux-armv7l/wheel/openhcs/pyqt_gui/widgets 2025-10-31T17:49:44,933 copying build/lib/openhcs/pyqt_gui/widgets/log_viewer.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/widgets 2025-10-31T17:49:44,936 copying build/lib/openhcs/pyqt_gui/widgets/step_parameter_editor.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/widgets 2025-10-31T17:49:44,939 copying build/lib/openhcs/pyqt_gui/widgets/function_pane.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/widgets 2025-10-31T17:49:44,941 copying build/lib/openhcs/pyqt_gui/widgets/__init__.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/widgets 2025-10-31T17:49:44,943 copying build/lib/openhcs/pyqt_gui/widgets/system_monitor.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/widgets 2025-10-31T17:49:44,946 copying build/lib/openhcs/pyqt_gui/widgets/function_list_editor.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/widgets 2025-10-31T17:49:44,950 copying build/lib/openhcs/pyqt_gui/widgets/pipeline_editor.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/widgets 2025-10-31T17:49:44,953 copying build/lib/openhcs/pyqt_gui/widgets/image_browser.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/widgets 2025-10-31T17:49:44,957 copying build/lib/openhcs/pyqt_gui/widgets/enhanced_path_widget.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/widgets 2025-10-31T17:49:44,959 copying build/lib/openhcs/pyqt_gui/widgets/status_bar.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/widgets 2025-10-31T17:49:44,962 copying build/lib/openhcs/pyqt_gui/widgets/plate_manager.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/widgets 2025-10-31T17:49:44,966 creating build/bdist.linux-armv7l/wheel/openhcs/pyqt_gui/widgets/shared 2025-10-31T17:49:44,968 copying build/lib/openhcs/pyqt_gui/widgets/shared/widget_strategies.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/widgets/shared 2025-10-31T17:49:44,971 copying build/lib/openhcs/pyqt_gui/widgets/shared/zmq_server_manager.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/widgets/shared 2025-10-31T17:49:44,974 copying build/lib/openhcs/pyqt_gui/widgets/shared/__init__.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/widgets/shared 2025-10-31T17:49:44,976 copying build/lib/openhcs/pyqt_gui/widgets/shared/no_scroll_spinbox.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/widgets/shared 2025-10-31T17:49:44,978 copying build/lib/openhcs/pyqt_gui/widgets/shared/parameter_form_manager.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/widgets/shared 2025-10-31T17:49:44,983 copying build/lib/openhcs/pyqt_gui/widgets/shared/column_filter_widget.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/widgets/shared 2025-10-31T17:49:44,986 copying build/lib/openhcs/pyqt_gui/widgets/shared/layout_constants.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/widgets/shared 2025-10-31T17:49:44,988 copying build/lib/openhcs/pyqt_gui/widgets/shared/clickable_help_components.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/widgets/shared 2025-10-31T17:49:44,991 copying build/lib/openhcs/pyqt_gui/widgets/shared/plate_view_widget.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/widgets/shared 2025-10-31T17:49:44,994 creating build/bdist.linux-armv7l/wheel/openhcs/pyqt_gui/widgets/mixins 2025-10-31T17:49:44,995 copying build/lib/openhcs/pyqt_gui/widgets/mixins/selection_preservation_mixin.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/widgets/mixins 2025-10-31T17:49:44,998 copying build/lib/openhcs/pyqt_gui/widgets/mixins/__init__.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/widgets/mixins 2025-10-31T17:49:45,000 copying build/lib/openhcs/pyqt_gui/__init__.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui 2025-10-31T17:49:45,001 copying build/lib/openhcs/pyqt_gui/__main__.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui 2025-10-31T17:49:45,004 creating build/bdist.linux-armv7l/wheel/openhcs/pyqt_gui/utils 2025-10-31T17:49:45,005 copying build/lib/openhcs/pyqt_gui/utils/__init__.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/utils 2025-10-31T17:49:45,007 copying build/lib/openhcs/pyqt_gui/utils/process_tracker.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/utils 2025-10-31T17:49:45,010 copying build/lib/openhcs/pyqt_gui/utils/log_detection_utils.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/utils 2025-10-31T17:49:45,012 copying build/lib/openhcs/pyqt_gui/utils/window_utils.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/utils 2025-10-31T17:49:45,015 creating build/bdist.linux-armv7l/wheel/openhcs/pyqt_gui/shared 2025-10-31T17:49:45,016 copying build/lib/openhcs/pyqt_gui/shared/config_validator.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/shared 2025-10-31T17:49:45,019 copying build/lib/openhcs/pyqt_gui/shared/__init__.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/shared 2025-10-31T17:49:45,021 copying build/lib/openhcs/pyqt_gui/shared/palette_manager.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/shared 2025-10-31T17:49:45,023 copying build/lib/openhcs/pyqt_gui/shared/color_scheme.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/shared 2025-10-31T17:49:45,026 copying build/lib/openhcs/pyqt_gui/shared/style_generator.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/shared 2025-10-31T17:49:45,029 creating build/bdist.linux-armv7l/wheel/openhcs/pyqt_gui/windows 2025-10-31T17:49:45,031 copying build/lib/openhcs/pyqt_gui/windows/help_window.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/windows 2025-10-31T17:49:45,033 copying build/lib/openhcs/pyqt_gui/windows/base_form_dialog.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/windows 2025-10-31T17:49:45,036 copying build/lib/openhcs/pyqt_gui/windows/file_browser_window.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/windows 2025-10-31T17:49:45,039 copying build/lib/openhcs/pyqt_gui/windows/help_windows.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/windows 2025-10-31T17:49:45,041 copying build/lib/openhcs/pyqt_gui/windows/__init__.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/windows 2025-10-31T17:49:45,043 copying build/lib/openhcs/pyqt_gui/windows/plate_viewer_window.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/windows 2025-10-31T17:49:45,045 copying build/lib/openhcs/pyqt_gui/windows/config_window.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/windows 2025-10-31T17:49:45,048 copying build/lib/openhcs/pyqt_gui/windows/dual_editor_window.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/windows 2025-10-31T17:49:45,051 copying build/lib/openhcs/pyqt_gui/windows/synthetic_plate_generator_window.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/windows 2025-10-31T17:49:45,055 creating build/bdist.linux-armv7l/wheel/openhcs/pyqt_gui/services 2025-10-31T17:49:45,056 copying build/lib/openhcs/pyqt_gui/services/config_cache_adapter.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/services 2025-10-31T17:49:45,058 copying build/lib/openhcs/pyqt_gui/services/simple_code_editor.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/services 2025-10-31T17:49:45,061 copying build/lib/openhcs/pyqt_gui/services/__init__.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/services 2025-10-31T17:49:45,063 copying build/lib/openhcs/pyqt_gui/services/service_adapter.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/services 2025-10-31T17:49:45,066 copying build/lib/openhcs/pyqt_gui/services/async_service_bridge.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/services 2025-10-31T17:49:45,068 copying build/lib/openhcs/pyqt_gui/services/persistent_system_monitor.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui/services 2025-10-31T17:49:45,071 copying build/lib/openhcs/pyqt_gui/launch.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui 2025-10-31T17:49:45,073 copying build/lib/openhcs/pyqt_gui/main.py -> build/bdist.linux-armv7l/wheel/./openhcs/pyqt_gui 2025-10-31T17:49:45,077 creating build/bdist.linux-armv7l/wheel/openhcs/components 2025-10-31T17:49:45,078 copying build/lib/openhcs/components/framework.py -> build/bdist.linux-armv7l/wheel/./openhcs/components 2025-10-31T17:49:45,080 copying build/lib/openhcs/components/__init__.py -> build/bdist.linux-armv7l/wheel/./openhcs/components 2025-10-31T17:49:45,083 creating build/bdist.linux-armv7l/wheel/openhcs/textual_tui 2025-10-31T17:49:45,084 copying build/lib/openhcs/textual_tui/styles.css -> build/bdist.linux-armv7l/wheel/./openhcs/textual_tui 2025-10-31T17:49:45,087 creating build/bdist.linux-armv7l/wheel/openhcs/formats 2025-10-31T17:49:45,088 copying build/lib/openhcs/formats/experimental_analysis.py -> build/bdist.linux-armv7l/wheel/./openhcs/formats 2025-10-31T17:49:45,093 creating build/bdist.linux-armv7l/wheel/openhcs/formats/pattern 2025-10-31T17:49:45,094 copying build/lib/openhcs/formats/pattern/__init__.py -> build/bdist.linux-armv7l/wheel/./openhcs/formats/pattern 2025-10-31T17:49:45,096 copying build/lib/openhcs/formats/pattern/pattern_discovery.py -> build/bdist.linux-armv7l/wheel/./openhcs/formats/pattern 2025-10-31T17:49:45,099 copying build/lib/openhcs/formats/pattern/pattern_resolver.py -> build/bdist.linux-armv7l/wheel/./openhcs/formats/pattern 2025-10-31T17:49:45,101 copying build/lib/openhcs/formats/metaxpress.py -> build/bdist.linux-armv7l/wheel/./openhcs/formats 2025-10-31T17:49:45,104 copying build/lib/openhcs/formats/func_arg_prep.py -> build/bdist.linux-armv7l/wheel/./openhcs/formats 2025-10-31T17:49:45,107 running install_egg_info 2025-10-31T17:49:45,112 Copying openhcs.egg-info to build/bdist.linux-armv7l/wheel/./openhcs-0.3.8-py3.11.egg-info 2025-10-31T17:49:45,128 running install_scripts 2025-10-31T17:49:45,138 creating build/bdist.linux-armv7l/wheel/openhcs-0.3.8.dist-info/WHEEL 2025-10-31T17:49:45,140 creating '/tmp/pip-wheel-1rzichod/.tmp-x85nrost/openhcs-0.3.8-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-10-31T17:49:45,144 adding 'openhcs/__init__.py' 2025-10-31T17:49:45,146 adding 'openhcs/components/__init__.py' 2025-10-31T17:49:45,149 adding 'openhcs/components/framework.py' 2025-10-31T17:49:45,152 adding 'openhcs/config_framework/__init__.py' 2025-10-31T17:49:45,155 adding 'openhcs/config_framework/cache_warming.py' 2025-10-31T17:49:45,157 adding 'openhcs/config_framework/config.py' 2025-10-31T17:49:45,162 adding 'openhcs/config_framework/context_manager.py' 2025-10-31T17:49:45,166 adding 'openhcs/config_framework/dual_axis_resolver.py' 2025-10-31T17:49:45,168 adding 'openhcs/config_framework/global_config.py' 2025-10-31T17:49:45,178 adding 'openhcs/config_framework/lazy_factory.py' 2025-10-31T17:49:45,182 adding 'openhcs/config_framework/placeholder.py' 2025-10-31T17:49:45,184 adding 'openhcs/constants/__init__.py' 2025-10-31T17:49:45,188 adding 'openhcs/constants/constants.py' 2025-10-31T17:49:45,190 adding 'openhcs/constants/input_source.py' 2025-10-31T17:49:45,192 adding 'openhcs/constants/streaming.py' 2025-10-31T17:49:45,194 adding 'openhcs/core/__init__.py' 2025-10-31T17:49:45,198 adding 'openhcs/core/config.py' 2025-10-31T17:49:45,201 adding 'openhcs/core/config_cache.py' 2025-10-31T17:49:45,203 adding 'openhcs/core/lazy_gpu_imports.py' 2025-10-31T17:49:45,205 adding 'openhcs/core/lazy_placeholder.py' 2025-10-31T17:49:45,207 adding 'openhcs/core/lazy_placeholder_simplified.py' 2025-10-31T17:49:45,210 adding 'openhcs/core/log_utils.py' 2025-10-31T17:49:45,212 adding 'openhcs/core/metadata_cache.py' 2025-10-31T17:49:45,214 adding 'openhcs/core/path_cache.py' 2025-10-31T17:49:45,217 adding 'openhcs/core/registry_discovery.py' 2025-10-31T17:49:45,219 adding 'openhcs/core/roi.py' 2025-10-31T17:49:45,222 adding 'openhcs/core/streaming_config_factory.py' 2025-10-31T17:49:45,226 adding 'openhcs/core/utils.py' 2025-10-31T17:49:45,229 adding 'openhcs/core/xdg_paths.py' 2025-10-31T17:49:45,231 adding 'openhcs/core/components/__init__.py' 2025-10-31T17:49:45,234 adding 'openhcs/core/components/metaprogramming.py' 2025-10-31T17:49:45,236 adding 'openhcs/core/components/multiprocessing.py' 2025-10-31T17:49:45,240 adding 'openhcs/core/components/parser_metaprogramming.py' 2025-10-31T17:49:45,243 adding 'openhcs/core/components/validation.py' 2025-10-31T17:49:45,244 adding 'openhcs/core/context/__init__.py' 2025-10-31T17:49:45,246 adding 'openhcs/core/context/processing_context.py' 2025-10-31T17:49:45,248 adding 'openhcs/core/memory/__init__.py' 2025-10-31T17:49:45,249 adding 'openhcs/core/memory/conversion_helpers.py' 2025-10-31T17:49:45,251 adding 'openhcs/core/memory/converters.py' 2025-10-31T17:49:45,253 adding 'openhcs/core/memory/decorators.py' 2025-10-31T17:49:45,254 adding 'openhcs/core/memory/dtype_scaling.py' 2025-10-31T17:49:45,256 adding 'openhcs/core/memory/exceptions.py' 2025-10-31T17:49:45,258 adding 'openhcs/core/memory/framework_config.py' 2025-10-31T17:49:45,259 adding 'openhcs/core/memory/framework_ops.py' 2025-10-31T17:49:45,260 adding 'openhcs/core/memory/gpu_cleanup.py' 2025-10-31T17:49:45,262 adding 'openhcs/core/memory/oom_recovery.py' 2025-10-31T17:49:45,263 adding 'openhcs/core/memory/slice_processing.py' 2025-10-31T17:49:45,265 adding 'openhcs/core/memory/stack_utils.py' 2025-10-31T17:49:45,267 adding 'openhcs/core/memory/utils.py' 2025-10-31T17:49:45,269 adding 'openhcs/core/orchestrator/__init__.py' 2025-10-31T17:49:45,271 adding 'openhcs/core/orchestrator/gpu_scheduler.py' 2025-10-31T17:49:45,279 adding 'openhcs/core/orchestrator/orchestrator.py' 2025-10-31T17:49:45,282 adding 'openhcs/core/pipeline/__init__.py' 2025-10-31T17:49:45,289 adding 'openhcs/core/pipeline/compiler.py' 2025-10-31T17:49:45,292 adding 'openhcs/core/pipeline/funcstep_contract_validator.py' 2025-10-31T17:49:45,293 adding 'openhcs/core/pipeline/function_contracts.py' 2025-10-31T17:49:45,295 adding 'openhcs/core/pipeline/gpu_memory_validator.py' 2025-10-31T17:49:45,297 adding 'openhcs/core/pipeline/materialization_flag_planner.py' 2025-10-31T17:49:45,300 adding 'openhcs/core/pipeline/path_planner.py' 2025-10-31T17:49:45,301 adding 'openhcs/core/pipeline/pipeline_utils.py' 2025-10-31T17:49:45,303 adding 'openhcs/core/pipeline/step_attribute_stripper.py' 2025-10-31T17:49:45,305 adding 'openhcs/core/steps/__init__.py' 2025-10-31T17:49:45,307 adding 'openhcs/core/steps/abstract.py' 2025-10-31T17:49:45,315 adding 'openhcs/core/steps/function_step.py' 2025-10-31T17:49:45,317 adding 'openhcs/debug/__init__.py' 2025-10-31T17:49:45,319 adding 'openhcs/debug/example_export.py' 2025-10-31T17:49:45,320 adding 'openhcs/debug/example_export_clean.py' 2025-10-31T17:49:45,322 adding 'openhcs/debug/export.py' 2025-10-31T17:49:45,327 adding 'openhcs/debug/pickle_to_python.py' 2025-10-31T17:49:45,333 adding 'openhcs/formats/experimental_analysis.py' 2025-10-31T17:49:45,336 adding 'openhcs/formats/func_arg_prep.py' 2025-10-31T17:49:45,338 adding 'openhcs/formats/metaxpress.py' 2025-10-31T17:49:45,340 adding 'openhcs/formats/pattern/__init__.py' 2025-10-31T17:49:45,342 adding 'openhcs/formats/pattern/pattern_discovery.py' 2025-10-31T17:49:45,344 adding 'openhcs/formats/pattern/pattern_resolver.py' 2025-10-31T17:49:45,346 adding 'openhcs/introspection/__init__.py' 2025-10-31T17:49:45,351 adding 'openhcs/introspection/signature_analyzer.py' 2025-10-31T17:49:45,354 adding 'openhcs/introspection/unified_parameter_analyzer.py' 2025-10-31T17:49:45,356 adding 'openhcs/io/__init__.py' 2025-10-31T17:49:45,357 adding 'openhcs/io/async_init.py' 2025-10-31T17:49:45,359 adding 'openhcs/io/atomic.py' 2025-10-31T17:49:45,360 adding 'openhcs/io/backend_registry.py' 2025-10-31T17:49:45,363 adding 'openhcs/io/base.py' 2025-10-31T17:49:45,366 adding 'openhcs/io/disk.py' 2025-10-31T17:49:45,368 adding 'openhcs/io/exceptions.py' 2025-10-31T17:49:45,369 adding 'openhcs/io/fiji_stream.py' 2025-10-31T17:49:45,373 adding 'openhcs/io/filemanager.py' 2025-10-31T17:49:45,376 adding 'openhcs/io/memory.py' 2025-10-31T17:49:45,378 adding 'openhcs/io/metadata_migration.py' 2025-10-31T17:49:45,379 adding 'openhcs/io/metadata_writer.py' 2025-10-31T17:49:45,381 adding 'openhcs/io/napari_stream.py' 2025-10-31T17:49:45,388 adding 'openhcs/io/omero_local.py' 2025-10-31T17:49:45,390 adding 'openhcs/io/pipeline_migration.py' 2025-10-31T17:49:45,392 adding 'openhcs/io/streaming.py' 2025-10-31T17:49:45,394 adding 'openhcs/io/virtual_workspace.py' 2025-10-31T17:49:45,400 adding 'openhcs/io/zarr.py' 2025-10-31T17:49:45,402 adding 'openhcs/microscopes/__init__.py' 2025-10-31T17:49:45,403 adding 'openhcs/microscopes/handler_registry_service.py' 2025-10-31T17:49:45,407 adding 'openhcs/microscopes/imagexpress.py' 2025-10-31T17:49:45,411 adding 'openhcs/microscopes/microscope_base.py' 2025-10-31T17:49:45,413 adding 'openhcs/microscopes/microscope_interfaces.py' 2025-10-31T17:49:45,415 adding 'openhcs/microscopes/omero.py' 2025-10-31T17:49:45,420 adding 'openhcs/microscopes/openhcs.py' 2025-10-31T17:49:45,424 adding 'openhcs/microscopes/opera_phenix.py' 2025-10-31T17:49:45,427 adding 'openhcs/microscopes/opera_phenix_xml_parser.py' 2025-10-31T17:49:45,429 adding 'openhcs/omero/__init__.py' 2025-10-31T17:49:45,430 adding 'openhcs/omero/docker-compose.openhcs.yml' 2025-10-31T17:49:45,431 adding 'openhcs/omero/docker-compose.yml' 2025-10-31T17:49:45,433 adding 'openhcs/processing/__init__.py' 2025-10-31T17:49:45,436 adding 'openhcs/processing/func_registry.py' 2025-10-31T17:49:45,438 adding 'openhcs/processing/backends/__init__.py' 2025-10-31T17:49:45,440 adding 'openhcs/processing/backends/analysis/__init__.py' 2025-10-31T17:49:45,442 adding 'openhcs/processing/backends/analysis/cache_utils.py' 2025-10-31T17:49:45,448 adding 'openhcs/processing/backends/analysis/cell_counting_cpu.py' 2025-10-31T17:49:45,453 adding 'openhcs/processing/backends/analysis/cell_counting_cupy.py' 2025-10-31T17:49:45,460 adding 'openhcs/processing/backends/analysis/cell_counting_pyclesperanto.py' 2025-10-31T17:49:45,462 adding 'openhcs/processing/backends/analysis/consolidate_analysis_results.py' 2025-10-31T17:49:45,465 adding 'openhcs/processing/backends/analysis/consolidate_special_outputs.py' 2025-10-31T17:49:45,467 adding 'openhcs/processing/backends/analysis/cx5_format.py' 2025-10-31T17:49:45,470 adding 'openhcs/processing/backends/analysis/dxf_mask_pipeline.py' 2025-10-31T17:49:45,472 adding 'openhcs/processing/backends/analysis/focus_analyzer.py' 2025-10-31T17:49:45,475 adding 'openhcs/processing/backends/analysis/hmm_axon.py' 2025-10-31T17:49:45,478 adding 'openhcs/processing/backends/analysis/hmm_axon_torbi.py' 2025-10-31T17:49:45,482 adding 'openhcs/processing/backends/analysis/multi_template_matching.py' 2025-10-31T17:49:45,484 adding 'openhcs/processing/backends/analysis/self_supervised_segmentation_3d.py' 2025-10-31T17:49:45,487 adding 'openhcs/processing/backends/analysis/skan_axon_analysis.py' 2025-10-31T17:49:45,490 adding 'openhcs/processing/backends/analysis/straighten_object_3d.py' 2025-10-31T17:49:45,491 adding 'openhcs/processing/backends/assemblers/__init__.py' 2025-10-31T17:49:45,493 adding 'openhcs/processing/backends/assemblers/assemble_stack_cpu.py' 2025-10-31T17:49:45,496 adding 'openhcs/processing/backends/assemblers/assemble_stack_cupy.py' 2025-10-31T17:49:45,501 adding 'openhcs/processing/backends/assemblers/self_supervised_stitcher.py' 2025-10-31T17:49:45,503 adding 'openhcs/processing/backends/enhance/__init__.py' 2025-10-31T17:49:45,506 adding 'openhcs/processing/backends/enhance/basic_processor_cupy.py' 2025-10-31T17:49:45,508 adding 'openhcs/processing/backends/enhance/basic_processor_jax.py' 2025-10-31T17:49:45,510 adding 'openhcs/processing/backends/enhance/basic_processor_numpy.py' 2025-10-31T17:49:45,512 adding 'openhcs/processing/backends/enhance/cupy_clahe.py' 2025-10-31T17:49:45,514 adding 'openhcs/processing/backends/enhance/dl_edof_unsupervised.py' 2025-10-31T17:49:45,516 adding 'openhcs/processing/backends/enhance/focus_torch.py' 2025-10-31T17:49:45,518 adding 'openhcs/processing/backends/enhance/jax_nlm_processor.py' 2025-10-31T17:49:45,520 adding 'openhcs/processing/backends/enhance/n2v2_processor_torch.py' 2025-10-31T17:49:45,522 adding 'openhcs/processing/backends/enhance/self_supervised_2d_deconvolution.py' 2025-10-31T17:49:45,525 adding 'openhcs/processing/backends/enhance/self_supervised_3d_deconvolution.py' 2025-10-31T17:49:45,526 adding 'openhcs/processing/backends/enhance/torch_nlm_processor.py' 2025-10-31T17:49:45,528 adding 'openhcs/processing/backends/experimental_analysis/__init__.py' 2025-10-31T17:49:45,530 adding 'openhcs/processing/backends/experimental_analysis/cx5_registry.py' 2025-10-31T17:49:45,531 adding 'openhcs/processing/backends/experimental_analysis/format_registry.py' 2025-10-31T17:49:45,533 adding 'openhcs/processing/backends/experimental_analysis/format_registry_service.py' 2025-10-31T17:49:45,534 adding 'openhcs/processing/backends/experimental_analysis/metaxpress_registry.py' 2025-10-31T17:49:45,536 adding 'openhcs/processing/backends/experimental_analysis/unified_analysis_engine.py' 2025-10-31T17:49:45,538 adding 'openhcs/processing/backends/lib_registry/cupy_registry.py' 2025-10-31T17:49:45,540 adding 'openhcs/processing/backends/lib_registry/openhcs_registry.py' 2025-10-31T17:49:45,542 adding 'openhcs/processing/backends/lib_registry/pyclesperanto_registry.py' 2025-10-31T17:49:45,543 adding 'openhcs/processing/backends/lib_registry/registry_service.py' 2025-10-31T17:49:45,545 adding 'openhcs/processing/backends/lib_registry/scikit_image_registry.py' 2025-10-31T17:49:45,549 adding 'openhcs/processing/backends/lib_registry/unified_registry.py' 2025-10-31T17:49:45,551 adding 'openhcs/processing/backends/pos_gen/__init__.py' 2025-10-31T17:49:45,556 adding 'openhcs/processing/backends/pos_gen/ashlar_main_cpu.py' 2025-10-31T17:49:45,561 adding 'openhcs/processing/backends/pos_gen/ashlar_main_gpu.py' 2025-10-31T17:49:45,563 adding 'openhcs/processing/backends/pos_gen/mist_processor_cupy.py' 2025-10-31T17:49:45,565 adding 'openhcs/processing/backends/pos_gen/mist/__init__.py' 2025-10-31T17:49:45,567 adding 'openhcs/processing/backends/pos_gen/mist/boruvka_mst.py' 2025-10-31T17:49:45,568 adding 'openhcs/processing/backends/pos_gen/mist/gpu_kernels.py' 2025-10-31T17:49:45,573 adding 'openhcs/processing/backends/pos_gen/mist/mist_main.py' 2025-10-31T17:49:45,576 adding 'openhcs/processing/backends/pos_gen/mist/phase_correlation.py' 2025-10-31T17:49:45,577 adding 'openhcs/processing/backends/pos_gen/mist/position_reconstruction.py' 2025-10-31T17:49:45,580 adding 'openhcs/processing/backends/pos_gen/mist/quality_metrics.py' 2025-10-31T17:49:45,581 adding 'openhcs/processing/backends/processors/__init__.py' 2025-10-31T17:49:45,586 adding 'openhcs/processing/backends/processors/cupy_processor.py' 2025-10-31T17:49:45,589 adding 'openhcs/processing/backends/processors/jax_processor.py' 2025-10-31T17:49:45,592 adding 'openhcs/processing/backends/processors/numpy_processor.py' 2025-10-31T17:49:45,594 adding 'openhcs/processing/backends/processors/percentile_utils.py' 2025-10-31T17:49:45,597 adding 'openhcs/processing/backends/processors/pyclesperanto_processor.py' 2025-10-31T17:49:45,600 adding 'openhcs/processing/backends/processors/tensorflow_processor.py' 2025-10-31T17:49:45,604 adding 'openhcs/processing/backends/processors/torch_processor.py' 2025-10-31T17:49:45,606 adding 'openhcs/processing/presets/__init__.py' 2025-10-31T17:49:45,607 adding 'openhcs/processing/presets/pipelines/10x_mfd_crop_analyze.py' 2025-10-31T17:49:45,609 adding 'openhcs/processing/presets/pipelines/10x_mfd_crop_analyze_dapi-fitc-cy5.py' 2025-10-31T17:49:45,610 adding 'openhcs/processing/presets/pipelines/10x_mfd_stitch_ashlar_cpu.py' 2025-10-31T17:49:45,611 adding 'openhcs/processing/presets/pipelines/10x_mfd_stitch_gpu.py' 2025-10-31T17:49:45,612 adding 'openhcs/processing/presets/pipelines/cy5_axon_cell_body_crop_analysis.py' 2025-10-31T17:49:45,614 adding 'openhcs/processing/presets/pipelines/cy5_ctb_cell_count.py' 2025-10-31T17:49:45,615 adding 'openhcs/processing/presets/pipelines/imx_96_well_neurite_outgrowth_pipeline_cpu.py' 2025-10-31T17:49:45,616 adding 'openhcs/processing/presets/pipelines/imx_96_well_neurite_outgrowth_pipeline_gpu.py' 2025-10-31T17:49:45,617 adding 'openhcs/processing/presets/pipelines/test.py' 2025-10-31T17:49:45,619 adding 'openhcs/pyqt_gui/__init__.py' 2025-10-31T17:49:45,620 adding 'openhcs/pyqt_gui/__main__.py' 2025-10-31T17:49:45,622 adding 'openhcs/pyqt_gui/app.py' 2025-10-31T17:49:45,624 adding 'openhcs/pyqt_gui/config.py' 2025-10-31T17:49:45,626 adding 'openhcs/pyqt_gui/launch.py' 2025-10-31T17:49:45,630 adding 'openhcs/pyqt_gui/main.py' 2025-10-31T17:49:45,634 adding 'openhcs/pyqt_gui/dialogs/function_selector_dialog.py' 2025-10-31T17:49:45,636 adding 'openhcs/pyqt_gui/dialogs/group_by_selector_dialog.py' 2025-10-31T17:49:45,638 adding 'openhcs/pyqt_gui/dialogs/metadata_viewer_dialog.py' 2025-10-31T17:49:45,640 adding 'openhcs/pyqt_gui/services/__init__.py' 2025-10-31T17:49:45,641 adding 'openhcs/pyqt_gui/services/async_service_bridge.py' 2025-10-31T17:49:45,643 adding 'openhcs/pyqt_gui/services/config_cache_adapter.py' 2025-10-31T17:49:45,645 adding 'openhcs/pyqt_gui/services/persistent_system_monitor.py' 2025-10-31T17:49:45,647 adding 'openhcs/pyqt_gui/services/service_adapter.py' 2025-10-31T17:49:45,651 adding 'openhcs/pyqt_gui/services/simple_code_editor.py' 2025-10-31T17:49:45,653 adding 'openhcs/pyqt_gui/shared/__init__.py' 2025-10-31T17:49:45,656 adding 'openhcs/pyqt_gui/shared/color_scheme.py' 2025-10-31T17:49:45,658 adding 'openhcs/pyqt_gui/shared/config_validator.py' 2025-10-31T17:49:45,660 adding 'openhcs/pyqt_gui/shared/palette_manager.py' 2025-10-31T17:49:45,661 adding 'openhcs/pyqt_gui/shared/style_generator.py' 2025-10-31T17:49:45,663 adding 'openhcs/pyqt_gui/utils/__init__.py' 2025-10-31T17:49:45,664 adding 'openhcs/pyqt_gui/utils/log_detection_utils.py' 2025-10-31T17:49:45,666 adding 'openhcs/pyqt_gui/utils/process_tracker.py' 2025-10-31T17:49:45,667 adding 'openhcs/pyqt_gui/utils/window_utils.py' 2025-10-31T17:49:45,669 adding 'openhcs/pyqt_gui/widgets/__init__.py' 2025-10-31T17:49:45,671 adding 'openhcs/pyqt_gui/widgets/enhanced_path_widget.py' 2025-10-31T17:49:45,676 adding 'openhcs/pyqt_gui/widgets/function_list_editor.py' 2025-10-31T17:49:45,679 adding 'openhcs/pyqt_gui/widgets/function_pane.py' 2025-10-31T17:49:45,688 adding 'openhcs/pyqt_gui/widgets/image_browser.py' 2025-10-31T17:49:45,695 adding 'openhcs/pyqt_gui/widgets/log_viewer.py' 2025-10-31T17:49:45,701 adding 'openhcs/pyqt_gui/widgets/pipeline_editor.py' 2025-10-31T17:49:45,711 adding 'openhcs/pyqt_gui/widgets/plate_manager.py' 2025-10-31T17:49:45,713 adding 'openhcs/pyqt_gui/widgets/status_bar.py' 2025-10-31T17:49:45,715 adding 'openhcs/pyqt_gui/widgets/step_parameter_editor.py' 2025-10-31T17:49:45,719 adding 'openhcs/pyqt_gui/widgets/system_monitor.py' 2025-10-31T17:49:45,721 adding 'openhcs/pyqt_gui/widgets/mixins/__init__.py' 2025-10-31T17:49:45,723 adding 'openhcs/pyqt_gui/widgets/mixins/selection_preservation_mixin.py' 2025-10-31T17:49:45,725 adding 'openhcs/pyqt_gui/widgets/shared/__init__.py' 2025-10-31T17:49:45,726 adding 'openhcs/pyqt_gui/widgets/shared/clickable_help_components.py' 2025-10-31T17:49:45,729 adding 'openhcs/pyqt_gui/widgets/shared/column_filter_widget.py' 2025-10-31T17:49:45,730 adding 'openhcs/pyqt_gui/widgets/shared/layout_constants.py' 2025-10-31T17:49:45,732 adding 'openhcs/pyqt_gui/widgets/shared/no_scroll_spinbox.py' 2025-10-31T17:49:45,748 adding 'openhcs/pyqt_gui/widgets/shared/parameter_form_manager.py' 2025-10-31T17:49:45,752 adding 'openhcs/pyqt_gui/widgets/shared/plate_view_widget.py' 2025-10-31T17:49:45,756 adding 'openhcs/pyqt_gui/widgets/shared/widget_strategies.py' 2025-10-31T17:49:45,760 adding 'openhcs/pyqt_gui/widgets/shared/zmq_server_manager.py' 2025-10-31T17:49:45,762 adding 'openhcs/pyqt_gui/windows/__init__.py' 2025-10-31T17:49:45,764 adding 'openhcs/pyqt_gui/windows/base_form_dialog.py' 2025-10-31T17:49:45,768 adding 'openhcs/pyqt_gui/windows/config_window.py' 2025-10-31T17:49:45,771 adding 'openhcs/pyqt_gui/windows/dual_editor_window.py' 2025-10-31T17:49:45,774 adding 'openhcs/pyqt_gui/windows/file_browser_window.py' 2025-10-31T17:49:45,776 adding 'openhcs/pyqt_gui/windows/help_window.py' 2025-10-31T17:49:45,777 adding 'openhcs/pyqt_gui/windows/help_windows.py' 2025-10-31T17:49:45,780 adding 'openhcs/pyqt_gui/windows/plate_viewer_window.py' 2025-10-31T17:49:45,781 adding 'openhcs/pyqt_gui/windows/synthetic_plate_generator_window.py' 2025-10-31T17:49:45,785 adding 'openhcs/runtime/execution_server.py' 2025-10-31T17:49:45,787 adding 'openhcs/runtime/fiji_stream_visualizer.py' 2025-10-31T17:49:45,794 adding 'openhcs/runtime/fiji_viewer_server.py' 2025-10-31T17:49:45,803 adding 'openhcs/runtime/napari_stream_visualizer.py' 2025-10-31T17:49:45,806 adding 'openhcs/runtime/omero_instance_manager.py' 2025-10-31T17:49:45,808 adding 'openhcs/runtime/queue_tracker.py' 2025-10-31T17:49:45,809 adding 'openhcs/runtime/remote_orchestrator.py' 2025-10-31T17:49:45,811 adding 'openhcs/runtime/roi_converters.py' 2025-10-31T17:49:45,815 adding 'openhcs/runtime/zmq_base.py' 2025-10-31T17:49:45,817 adding 'openhcs/runtime/zmq_execution_client.py' 2025-10-31T17:49:45,820 adding 'openhcs/runtime/zmq_execution_server.py' 2025-10-31T17:49:45,822 adding 'openhcs/runtime/zmq_execution_server_launcher.py' 2025-10-31T17:49:45,824 adding 'openhcs/runtime/zmq_messages.py' 2025-10-31T17:49:45,825 adding 'openhcs/tests/__init__.py' 2025-10-31T17:49:45,827 adding 'openhcs/tests/basic_pipeline.py' 2025-10-31T17:49:45,828 adding 'openhcs/tests/test_pipeline.py' 2025-10-31T17:49:45,830 adding 'openhcs/tests/generators/__init__.py' 2025-10-31T17:49:45,836 adding 'openhcs/tests/generators/generate_synthetic_data.py' 2025-10-31T17:49:45,838 adding 'openhcs/textual_tui/styles.css' 2025-10-31T17:49:45,841 adding 'openhcs/ui/shared/__init__.py' 2025-10-31T17:49:45,843 adding 'openhcs/ui/shared/parameter_form_base.py' 2025-10-31T17:49:45,845 adding 'openhcs/ui/shared/parameter_form_config_factory.py' 2025-10-31T17:49:45,846 adding 'openhcs/ui/shared/parameter_form_constants.py' 2025-10-31T17:49:45,850 adding 'openhcs/ui/shared/parameter_form_service.py' 2025-10-31T17:49:45,852 adding 'openhcs/ui/shared/parameter_type_utils.py' 2025-10-31T17:49:45,853 adding 'openhcs/ui/shared/pattern_data_manager.py' 2025-10-31T17:49:45,855 adding 'openhcs/ui/shared/pattern_file_service.py' 2025-10-31T17:49:45,856 adding 'openhcs/ui/shared/search_service.py' 2025-10-31T17:49:45,858 adding 'openhcs/ui/shared/system_monitor_core.py' 2025-10-31T17:49:45,860 adding 'openhcs/ui/shared/ui_utils.py' 2025-10-31T17:49:45,861 adding 'openhcs/ui/shared/widget_creation_registry.py' 2025-10-31T17:49:45,863 adding 'openhcs/utils/display_config_factory.py' 2025-10-31T17:49:45,865 adding 'openhcs/utils/enum_factory.py' 2025-10-31T17:49:45,866 adding 'openhcs/utils/environment.py' 2025-10-31T17:49:45,868 adding 'openhcs/utils/import_utils.py' 2025-10-31T17:49:45,869 adding 'openhcs/utils/performance_monitor.py' 2025-10-31T17:49:45,872 adding 'openhcs/utils/recache_function_registry.py' 2025-10-31T17:49:45,873 adding 'openhcs/validation/__init__.py' 2025-10-31T17:49:45,875 adding 'openhcs/validation/ast_validator.py' 2025-10-31T17:49:45,877 adding 'openhcs/validation/validate.py' 2025-10-31T17:49:45,881 adding 'openhcs-0.3.8.dist-info/METADATA' 2025-10-31T17:49:45,882 adding 'openhcs-0.3.8.dist-info/WHEEL' 2025-10-31T17:49:45,883 adding 'openhcs-0.3.8.dist-info/entry_points.txt' 2025-10-31T17:49:45,884 adding 'openhcs-0.3.8.dist-info/top_level.txt' 2025-10-31T17:49:45,889 adding 'openhcs-0.3.8.dist-info/RECORD' 2025-10-31T17:49:45,903 removing build/bdist.linux-armv7l/wheel 2025-10-31T17:49:46,089 Building wheel for openhcs (pyproject.toml): finished with status 'done' 2025-10-31T17:49:46,104 Created wheel for openhcs: filename=openhcs-0.3.8-py3-none-any.whl size=1098259 sha256=121493ca28ebba09c23e6090005f5e3f2e51191a31a08ff48cf08afecbd75e94 2025-10-31T17:49:46,105 Stored in directory: /tmp/pip-ephem-wheel-cache-koya_1ql/wheels/7f/56/3f/98089a20aea73ed679829561c60352a33500c6013e97314cd2 2025-10-31T17:49:46,128 Successfully built openhcs 2025-10-31T17:49:46,158 Removed build tracker: '/tmp/pip-build-tracker-7flbml75'