2025-11-01T08:42:50,191 Created temporary directory: /tmp/pip-ephem-wheel-cache-n1_im7a5 2025-11-01T08:42:50,192 Created temporary directory: /tmp/pip-build-tracker-bj94fw9a 2025-11-01T08:42:50,193 Initialized build tracking at /tmp/pip-build-tracker-bj94fw9a 2025-11-01T08:42:50,194 Created build tracker: /tmp/pip-build-tracker-bj94fw9a 2025-11-01T08:42:50,194 Entered build tracker: /tmp/pip-build-tracker-bj94fw9a 2025-11-01T08:42:50,195 Created temporary directory: /tmp/pip-wheel-_oirr69x 2025-11-01T08:42:50,198 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2025-11-01T08:42:50,200 Created temporary directory: /tmp/pip-ephem-wheel-cache-z9q3un81 2025-11-01T08:42:50,225 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-11-01T08:42:50,229 2 location(s) to search for versions of seqmat: 2025-11-01T08:42:50,229 * https://pypi.org/simple/seqmat/ 2025-11-01T08:42:50,229 * https://www.piwheels.org/simple/seqmat/ 2025-11-01T08:42:50,230 Fetching project page and analyzing links: https://pypi.org/simple/seqmat/ 2025-11-01T08:42:50,231 Getting page https://pypi.org/simple/seqmat/ 2025-11-01T08:42:50,232 Found index url https://pypi.org/simple 2025-11-01T08:42:50,449 Fetched page https://pypi.org/simple/seqmat/ as application/vnd.pypi.simple.v1+json 2025-11-01T08:42:50,461 Skipping link: No binaries permitted for seqmat: https://files.pythonhosted.org/packages/29/ac/af8917c09019f4f5bd63597b98d13e347070d57562e39ed4017e3ddde981/seqmat-0.1.0-py3-none-any.whl (from https://pypi.org/simple/seqmat/) (requires-python:>=3.8) 2025-11-01T08:42:50,462 Found link https://files.pythonhosted.org/packages/85/73/49c0d6bf3ce4f71ba4e7953692a694f2ec0103ced500be4428bdf40367f2/seqmat-0.1.0.tar.gz (from https://pypi.org/simple/seqmat/) (requires-python:>=3.8), version: 0.1.0 2025-11-01T08:42:50,463 Skipping link: No binaries permitted for seqmat: https://files.pythonhosted.org/packages/ba/c1/5da1e880e2258a8985806d86d2fd80dccfad87e5a645aed01a4246b412e8/seqmat-0.1.1-py3-none-any.whl (from https://pypi.org/simple/seqmat/) (requires-python:>=3.8) 2025-11-01T08:42:50,464 Found link https://files.pythonhosted.org/packages/3b/38/e835bbacaf3e87c569a662d68d5465e13631ddafd3afee4f1f05ccafd9b2/seqmat-0.1.1.tar.gz (from https://pypi.org/simple/seqmat/) (requires-python:>=3.8), version: 0.1.1 2025-11-01T08:42:50,465 Skipping link: No binaries permitted for seqmat: https://files.pythonhosted.org/packages/fe/45/9d8682a97c7477ea5639c5108e01e02130ec2118310aa05d214a800b3c77/seqmat-0.1.2-py3-none-any.whl (from https://pypi.org/simple/seqmat/) (requires-python:>=3.8) 2025-11-01T08:42:50,466 Found link https://files.pythonhosted.org/packages/35/c9/e342da3e795c7003b0a426a2020d50ff4d04da10b758a421916a081aa78c/seqmat-0.1.2.tar.gz (from https://pypi.org/simple/seqmat/) (requires-python:>=3.8), version: 0.1.2 2025-11-01T08:42:50,467 Skipping link: No binaries permitted for seqmat: https://files.pythonhosted.org/packages/87/31/b632130dc89dfd80ea096d322d3eeff067193e3ad7ea55d2891cdeffdcc1/seqmat-0.1.3-py3-none-any.whl (from https://pypi.org/simple/seqmat/) (requires-python:>=3.8) 2025-11-01T08:42:50,467 Skipping link: No binaries permitted for seqmat: https://files.pythonhosted.org/packages/c4/84/3fa814560e34fc50a23e5999cd1c6d4b2f12bf2aa6214dd9470c6d5d5acd/seqmat-0.1.4-py3-none-any.whl (from https://pypi.org/simple/seqmat/) (requires-python:>=3.8) 2025-11-01T08:42:50,468 Found link https://files.pythonhosted.org/packages/29/df/959328734ee929a10eaa984fab22538a6f666f27326f61240d7d2416ef87/seqmat-0.1.4.tar.gz (from https://pypi.org/simple/seqmat/) (requires-python:>=3.8), version: 0.1.4 2025-11-01T08:42:50,469 Skipping link: No binaries permitted for seqmat: https://files.pythonhosted.org/packages/a6/2d/7ff0fd96f07c3e1bd81156a260c3115108fb9660544428777fb373920237/seqmat-0.1.5-py3-none-any.whl (from https://pypi.org/simple/seqmat/) (requires-python:>=3.8) 2025-11-01T08:42:50,470 Found link https://files.pythonhosted.org/packages/db/9a/51544feeff61c92eccfc440c857498e48792bdbc603f5369d8b34e176d71/seqmat-0.1.5.tar.gz (from https://pypi.org/simple/seqmat/) (requires-python:>=3.8), version: 0.1.5 2025-11-01T08:42:50,471 Skipping link: No binaries permitted for seqmat: https://files.pythonhosted.org/packages/86/d7/eaf78c6ae04475d00874216487096ac02f00d97451ad2878e63d4472a06e/seqmat-0.1.6-py3-none-any.whl (from 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2025-11-01T08:42:50,481 Skipping link: No binaries permitted for seqmat: https://files.pythonhosted.org/packages/7d/78/24bb0de5b5156807a5c53a57f58ffeb0d8650c8a49941cebf82f8f391434/seqmat-0.1.12-py3-none-any.whl (from https://pypi.org/simple/seqmat/) (requires-python:>=3.10) 2025-11-01T08:42:50,482 Found link https://files.pythonhosted.org/packages/97/36/6d5ae7021375224d55fb5c5bb9d00b0ec08e1d2a0ae02a7ce7c60255c76d/seqmat-0.1.12.tar.gz (from https://pypi.org/simple/seqmat/) (requires-python:>=3.10), version: 0.1.12 2025-11-01T08:42:50,483 Skipping link: No binaries permitted for seqmat: https://files.pythonhosted.org/packages/50/8e/f6c0423aa6dd717823fb15b08002eb8227ef8a9b4da1e1d452d0e8eff2ac/seqmat-0.1.13-py3-none-any.whl (from https://pypi.org/simple/seqmat/) (requires-python:>=3.10) 2025-11-01T08:42:50,484 Found link https://files.pythonhosted.org/packages/c0/18/6aea9f02e6dc225e6a29802dc4623dc886b4a7ef20cca314e5fde45d75d5/seqmat-0.1.13.tar.gz (from https://pypi.org/simple/seqmat/) 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(requires-python:>=3.10) 2025-11-01T08:42:50,493 Found link https://files.pythonhosted.org/packages/f6/67/3bca168f530992378db5ace241bf7ae2ddf34cd2a9daa0849cbd882092b0/seqmat-0.1.19.tar.gz (from https://pypi.org/simple/seqmat/) (requires-python:>=3.10), version: 0.1.19 2025-11-01T08:42:50,494 Skipping link: No binaries permitted for seqmat: https://files.pythonhosted.org/packages/d2/1a/82ded4ed274ee37f8f5eac5a980d7204b741e258c91bbd1c2fb788ee8430/seqmat-0.1.20-py3-none-any.whl (from https://pypi.org/simple/seqmat/) (requires-python:>=3.10) 2025-11-01T08:42:50,495 Found link https://files.pythonhosted.org/packages/a0/c0/6adaed0bd26fb9111796ea55414918348e87fa3ed49f01a557540a5e0196/seqmat-0.1.20.tar.gz (from https://pypi.org/simple/seqmat/) (requires-python:>=3.10), version: 0.1.20 2025-11-01T08:42:50,496 Skipping link: No binaries permitted for seqmat: https://files.pythonhosted.org/packages/45/d6/3ebb5057244cac2848a5cdcd1c6e28f7d20ace11a42a0244d8856459f121/seqmat-0.1.21-py3-none-any.whl 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https://files.pythonhosted.org/packages/97/be/5017740f43de8981f3fec06f9a3c6ffa593ee134630acf5d14577250f2a8/seqmat-0.1.30.tar.gz (from https://pypi.org/simple/seqmat/) (requires-python:>=3.10), version: 0.1.30 2025-11-01T08:42:50,508 Skipping link: No binaries permitted for seqmat: https://files.pythonhosted.org/packages/a6/6f/cf28e14ec6c84488c0c9074b935294066fc2f315d17291099e5af2fda57b/seqmat-0.1.31-py3-none-any.whl (from https://pypi.org/simple/seqmat/) (requires-python:>=3.10) 2025-11-01T08:42:50,509 Found link https://files.pythonhosted.org/packages/4f/c0/fc892cf15c43ff6992a7e4bb10bf2cb1881088430db662e210054fddcd80/seqmat-0.1.31.tar.gz (from https://pypi.org/simple/seqmat/) (requires-python:>=3.10), version: 0.1.31 2025-11-01T08:42:50,509 Skipping link: No binaries permitted for seqmat: https://files.pythonhosted.org/packages/c7/84/669bfc7c36a68fe43aca79862ea82a5283591b88a51f5fe761d62c2e996e/seqmat-0.1.32-py3-none-any.whl (from https://pypi.org/simple/seqmat/) (requires-python:>=3.10) 2025-11-01T08:42:50,510 Found link https://files.pythonhosted.org/packages/6a/1c/5ad2ea5f56570b5aab86a2de93be892803431ddd4ca5171341fe9d08d29d/seqmat-0.1.32.tar.gz (from https://pypi.org/simple/seqmat/) (requires-python:>=3.10), version: 0.1.32 2025-11-01T08:42:50,511 Fetching project page and analyzing links: https://www.piwheels.org/simple/seqmat/ 2025-11-01T08:42:50,511 Getting page https://www.piwheels.org/simple/seqmat/ 2025-11-01T08:42:50,513 Found index url https://www.piwheels.org/simple 2025-11-01T08:42:50,673 Fetched page https://www.piwheels.org/simple/seqmat/ as text/html 2025-11-01T08:42:50,681 Skipping link: No binaries permitted for seqmat: https://www.piwheels.org/simple/seqmat/seqmat-0.1.31-py3-none-any.whl#sha256=18c6f1de77fc7f68edb51b929a796d69120ab569dbbd4e2394981fd2c85d2c8b (from https://www.piwheels.org/simple/seqmat/) (requires-python:>=3.10) 2025-11-01T08:42:50,682 Skipping link: No binaries permitted for seqmat: 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https://archive1.piwheels.org/simple/seqmat/seqmat-0.1.20-py3-none-any.whl#sha256=01a02f8b5b8cde163b6102d761fed6133977503384f780ce3e7e4decb55fdda7 (from https://www.piwheels.org/simple/seqmat/) (requires-python:>=3.10) 2025-11-01T08:42:50,686 Skipping link: No binaries permitted for seqmat: https://archive1.piwheels.org/simple/seqmat/seqmat-0.1.19-py3-none-any.whl#sha256=1839bc16125a324250a2db0af069f484b07daf0bcbc3ab4010ef1bbc966c6266 (from https://www.piwheels.org/simple/seqmat/) (requires-python:>=3.10) 2025-11-01T08:42:50,687 Skipping link: No binaries permitted for seqmat: https://archive1.piwheels.org/simple/seqmat/seqmat-0.1.18-py3-none-any.whl#sha256=9accda2e8ac05051bdbb08096075aedd84c2f5f6f00bc1b7a1cbc0aee36fc3a2 (from https://www.piwheels.org/simple/seqmat/) (requires-python:>=3.10) 2025-11-01T08:42:50,688 Skipping link: No binaries permitted for seqmat: https://archive1.piwheels.org/simple/seqmat/seqmat-0.1.17-py3-none-any.whl#sha256=76673b8513f3566dbf0d271f1868de65ece6d64e9c79b91cc7e33a9960f1e407 (from https://www.piwheels.org/simple/seqmat/) (requires-python:>=3.10) 2025-11-01T08:42:50,688 Skipping link: No binaries permitted for seqmat: https://archive1.piwheels.org/simple/seqmat/seqmat-0.1.16-py3-none-any.whl#sha256=4db7f593397d5759a026eed20df9b66be449ed32949a097bd9678a9bd8d76ded (from https://www.piwheels.org/simple/seqmat/) (requires-python:>=3.10) 2025-11-01T08:42:50,689 Skipping link: No binaries permitted for seqmat: https://archive1.piwheels.org/simple/seqmat/seqmat-0.1.15-py3-none-any.whl#sha256=c91087b3908c5526437d669b65b52743662766cb8de04ddcc832c4e115b14993 (from https://www.piwheels.org/simple/seqmat/) (requires-python:>=3.10) 2025-11-01T08:42:50,689 Skipping link: No binaries permitted for seqmat: https://archive1.piwheels.org/simple/seqmat/seqmat-0.1.14-py3-none-any.whl#sha256=ff308fc946b8bc9534c9dd09b5bff1720c496688fcc717ce3eddd38ac4c87ebd (from https://www.piwheels.org/simple/seqmat/) (requires-python:>=3.10) 2025-11-01T08:42:50,690 Skipping link: No binaries permitted for seqmat: https://archive1.piwheels.org/simple/seqmat/seqmat-0.1.13-py3-none-any.whl#sha256=f71664b0a8a891a35831a73cdb1d17854d9f8fef26dd80ac283dba23ebdb22ee (from https://www.piwheels.org/simple/seqmat/) (requires-python:>=3.10) 2025-11-01T08:42:50,690 Skipping link: No binaries permitted for seqmat: https://archive1.piwheels.org/simple/seqmat/seqmat-0.1.12-py3-none-any.whl#sha256=5cebee4caa471ac2b4f8885efd1b360ff61b764d515b48fa90f5ab4b4f031cce (from https://www.piwheels.org/simple/seqmat/) (requires-python:>=3.10) 2025-11-01T08:42:50,691 Skipping link: No binaries permitted for seqmat: 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https://archive1.piwheels.org/simple/seqmat/seqmat-0.1.8-py3-none-any.whl#sha256=49f5563802c046ca4678d958c9b96aad2ea6b5cc47ffadbf5d63381af631239e (from https://www.piwheels.org/simple/seqmat/) (requires-python:>=3.10) 2025-11-01T08:42:50,694 Skipping link: No binaries permitted for seqmat: https://archive1.piwheels.org/simple/seqmat/seqmat-0.1.7-py3-none-any.whl#sha256=e720e05af54a7a092cecbdf9e9e72b63a59cfcb01eded805d47aae52e7f063ca (from https://www.piwheels.org/simple/seqmat/) (requires-python:>=3.10) 2025-11-01T08:42:50,694 Skipping link: No binaries permitted for seqmat: https://archive1.piwheels.org/simple/seqmat/seqmat-0.1.6-py3-none-any.whl#sha256=70e48b986f9394f327d109e01cb6c1b942925a2f1b52a0ff693c5691d46118dd (from https://www.piwheels.org/simple/seqmat/) (requires-python:>=3.8) 2025-11-01T08:42:50,695 Skipping link: No binaries permitted for seqmat: https://archive1.piwheels.org/simple/seqmat/seqmat-0.1.5-py3-none-any.whl#sha256=e4c725f88a3261b2b46ec7b7b75572964a9efc8712c42c8567ec608f2c9a08a8 (from https://www.piwheels.org/simple/seqmat/) (requires-python:>=3.8) 2025-11-01T08:42:50,695 Skipping link: No binaries permitted for seqmat: https://archive1.piwheels.org/simple/seqmat/seqmat-0.1.4-py3-none-any.whl#sha256=3ef0f2e02286de255d1731e64a08bc235c5085bf689f7918396b4a8982a14195 (from https://www.piwheels.org/simple/seqmat/) (requires-python:>=3.8) 2025-11-01T08:42:50,696 Skipping link: No binaries permitted for seqmat: https://archive1.piwheels.org/simple/seqmat/seqmat-0.1.2-py3-none-any.whl#sha256=81d72023993394f9a800b27d16616149672b2ea3c504ac8400b47c96ffa5d7e2 (from https://www.piwheels.org/simple/seqmat/) (requires-python:>=3.8) 2025-11-01T08:42:50,697 Skipping link: No binaries permitted for seqmat: https://archive1.piwheels.org/simple/seqmat/seqmat-0.1.1-py3-none-any.whl#sha256=fa42a4e0b266ac1e13c73a66c7885b3d1c3972eca867f81c739bc3583744f2d8 (from https://www.piwheels.org/simple/seqmat/) (requires-python:>=3.8) 2025-11-01T08:42:50,697 Skipping link: No binaries permitted for seqmat: https://archive1.piwheels.org/simple/seqmat/seqmat-0.1.0-py3-none-any.whl#sha256=4aac50f8ae8811ac5c12742f14fc069bb3f1181c8175af2941a4a8a1c96bb424 (from https://www.piwheels.org/simple/seqmat/) (requires-python:>=3.8) 2025-11-01T08:42:50,697 Skipping link: not a file: https://www.piwheels.org/simple/seqmat/ 2025-11-01T08:42:50,698 Skipping link: not a file: https://pypi.org/simple/seqmat/ 2025-11-01T08:42:50,721 Given no hashes to check 1 links for project 'seqmat': discarding no candidates 2025-11-01T08:42:50,740 Collecting seqmat==0.1.32 2025-11-01T08:42:50,743 Created temporary directory: /tmp/pip-unpack-f3w7px_5 2025-11-01T08:42:50,882 Downloading seqmat-0.1.32.tar.gz (47 kB) 2025-11-01T08:42:50,993 Added seqmat==0.1.32 from https://files.pythonhosted.org/packages/6a/1c/5ad2ea5f56570b5aab86a2de93be892803431ddd4ca5171341fe9d08d29d/seqmat-0.1.32.tar.gz to build tracker '/tmp/pip-build-tracker-bj94fw9a' 2025-11-01T08:42:50,995 Running setup.py (path:/tmp/pip-wheel-_oirr69x/seqmat_31dd63be4d904a889d68f88d94d74a67/setup.py) egg_info for package seqmat 2025-11-01T08:42:50,996 Created temporary directory: /tmp/pip-pip-egg-info-rxpucd5x 2025-11-01T08:42:50,997 Preparing metadata (setup.py): started 2025-11-01T08:42:50,998 Running command python setup.py egg_info 2025-11-01T08:42:51,863 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-11-01T08:42:51,864 !! 2025-11-01T08:42:51,865 ******************************************************************************** 2025-11-01T08:42:51,865 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-11-01T08:42:51,866 License :: OSI Approved :: MIT License 2025-11-01T08:42:51,868 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-11-01T08:42:51,868 ******************************************************************************** 2025-11-01T08:42:51,869 !! 2025-11-01T08:42:51,870 self._finalize_license_expression() 2025-11-01T08:42:51,894 running egg_info 2025-11-01T08:42:51,921 creating /tmp/pip-pip-egg-info-rxpucd5x/seqmat.egg-info 2025-11-01T08:42:51,922 writing /tmp/pip-pip-egg-info-rxpucd5x/seqmat.egg-info/PKG-INFO 2025-11-01T08:42:51,930 writing dependency_links to /tmp/pip-pip-egg-info-rxpucd5x/seqmat.egg-info/dependency_links.txt 2025-11-01T08:42:51,931 writing entry points to /tmp/pip-pip-egg-info-rxpucd5x/seqmat.egg-info/entry_points.txt 2025-11-01T08:42:51,935 writing requirements to /tmp/pip-pip-egg-info-rxpucd5x/seqmat.egg-info/requires.txt 2025-11-01T08:42:51,936 writing top-level names to /tmp/pip-pip-egg-info-rxpucd5x/seqmat.egg-info/top_level.txt 2025-11-01T08:42:51,937 writing manifest file '/tmp/pip-pip-egg-info-rxpucd5x/seqmat.egg-info/SOURCES.txt' 2025-11-01T08:42:52,027 reading manifest file '/tmp/pip-pip-egg-info-rxpucd5x/seqmat.egg-info/SOURCES.txt' 2025-11-01T08:42:52,028 reading manifest template 'MANIFEST.in' 2025-11-01T08:42:52,035 adding license file 'LICENSE' 2025-11-01T08:42:52,038 writing manifest file '/tmp/pip-pip-egg-info-rxpucd5x/seqmat.egg-info/SOURCES.txt' 2025-11-01T08:42:52,144 Preparing metadata (setup.py): finished with status 'done' 2025-11-01T08:42:52,150 Source in /tmp/pip-wheel-_oirr69x/seqmat_31dd63be4d904a889d68f88d94d74a67 has version 0.1.32, which satisfies requirement seqmat==0.1.32 from https://files.pythonhosted.org/packages/6a/1c/5ad2ea5f56570b5aab86a2de93be892803431ddd4ca5171341fe9d08d29d/seqmat-0.1.32.tar.gz 2025-11-01T08:42:52,151 Removed seqmat==0.1.32 from https://files.pythonhosted.org/packages/6a/1c/5ad2ea5f56570b5aab86a2de93be892803431ddd4ca5171341fe9d08d29d/seqmat-0.1.32.tar.gz from build tracker '/tmp/pip-build-tracker-bj94fw9a' 2025-11-01T08:42:52,160 Created temporary directory: /tmp/pip-unpack-b8ghsx99 2025-11-01T08:42:52,161 Building wheels for collected packages: seqmat 2025-11-01T08:42:52,165 Created temporary directory: /tmp/pip-wheel-p07ibewt 2025-11-01T08:42:52,165 Building wheel for seqmat (setup.py): started 2025-11-01T08:42:52,167 Destination directory: /tmp/pip-wheel-p07ibewt 2025-11-01T08:42:52,167 Running command python setup.py bdist_wheel 2025-11-01T08:42:53,004 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-11-01T08:42:53,005 !! 2025-11-01T08:42:53,006 ******************************************************************************** 2025-11-01T08:42:53,006 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-11-01T08:42:53,007 License :: OSI Approved :: MIT License 2025-11-01T08:42:53,008 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-11-01T08:42:53,009 ******************************************************************************** 2025-11-01T08:42:53,010 !! 2025-11-01T08:42:53,010 self._finalize_license_expression() 2025-11-01T08:42:53,011 running bdist_wheel 2025-11-01T08:42:53,146 running build 2025-11-01T08:42:53,147 running build_py 2025-11-01T08:42:53,178 creating build/lib/tests 2025-11-01T08:42:53,180 copying tests/__init__.py -> build/lib/tests 2025-11-01T08:42:53,182 copying tests/test_gene.py -> build/lib/tests 2025-11-01T08:42:53,185 copying tests/test_seqmat.py -> build/lib/tests 2025-11-01T08:42:53,188 creating build/lib/seqmat 2025-11-01T08:42:53,189 copying seqmat/config.py -> build/lib/seqmat 2025-11-01T08:42:53,192 copying seqmat/gene.py -> build/lib/seqmat 2025-11-01T08:42:53,194 copying seqmat/cli.py -> build/lib/seqmat 2025-11-01T08:42:53,197 copying seqmat/__init__.py -> build/lib/seqmat 2025-11-01T08:42:53,199 copying seqmat/utils.py -> build/lib/seqmat 2025-11-01T08:42:53,202 copying seqmat/seqmat.py -> build/lib/seqmat 2025-11-01T08:42:53,205 copying seqmat/transcript.py -> build/lib/seqmat 2025-11-01T08:42:53,207 running egg_info 2025-11-01T08:42:53,235 writing seqmat.egg-info/PKG-INFO 2025-11-01T08:42:53,242 writing dependency_links to seqmat.egg-info/dependency_links.txt 2025-11-01T08:42:53,243 writing entry points to seqmat.egg-info/entry_points.txt 2025-11-01T08:42:53,247 writing requirements to seqmat.egg-info/requires.txt 2025-11-01T08:42:53,248 writing top-level names to seqmat.egg-info/top_level.txt 2025-11-01T08:42:53,282 reading manifest file 'seqmat.egg-info/SOURCES.txt' 2025-11-01T08:42:53,286 reading manifest template 'MANIFEST.in' 2025-11-01T08:42:53,293 adding license file 'LICENSE' 2025-11-01T08:42:53,296 writing manifest file 'seqmat.egg-info/SOURCES.txt' 2025-11-01T08:42:53,328 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2025-11-01T08:42:53,329 !! 2025-11-01T08:42:53,330 ******************************************************************************** 2025-11-01T08:42:53,331 Please avoid running ``setup.py`` directly. 2025-11-01T08:42:53,332 Instead, use pypa/build, pypa/installer or other 2025-11-01T08:42:53,332 standards-based tools. 2025-11-01T08:42:53,333 This deprecation is overdue, please update your project and remove deprecated 2025-11-01T08:42:53,333 calls to avoid build errors in the future. 2025-11-01T08:42:53,334 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2025-11-01T08:42:53,335 ******************************************************************************** 2025-11-01T08:42:53,336 !! 2025-11-01T08:42:53,336 self.initialize_options() 2025-11-01T08:42:53,360 installing to build/bdist.linux-armv7l/wheel 2025-11-01T08:42:53,361 running install 2025-11-01T08:42:53,385 running install_lib 2025-11-01T08:42:53,414 creating build/bdist.linux-armv7l/wheel 2025-11-01T08:42:53,417 creating build/bdist.linux-armv7l/wheel/tests 2025-11-01T08:42:53,418 copying build/lib/tests/__init__.py -> build/bdist.linux-armv7l/wheel/./tests 2025-11-01T08:42:53,420 copying build/lib/tests/test_gene.py -> build/bdist.linux-armv7l/wheel/./tests 2025-11-01T08:42:53,422 copying build/lib/tests/test_seqmat.py -> build/bdist.linux-armv7l/wheel/./tests 2025-11-01T08:42:53,425 creating build/bdist.linux-armv7l/wheel/seqmat 2025-11-01T08:42:53,426 copying build/lib/seqmat/config.py -> build/bdist.linux-armv7l/wheel/./seqmat 2025-11-01T08:42:53,428 copying build/lib/seqmat/gene.py -> build/bdist.linux-armv7l/wheel/./seqmat 2025-11-01T08:42:53,430 copying build/lib/seqmat/cli.py -> build/bdist.linux-armv7l/wheel/./seqmat 2025-11-01T08:42:53,433 copying build/lib/seqmat/__init__.py -> build/bdist.linux-armv7l/wheel/./seqmat 2025-11-01T08:42:53,435 copying build/lib/seqmat/utils.py -> build/bdist.linux-armv7l/wheel/./seqmat 2025-11-01T08:42:53,438 copying build/lib/seqmat/seqmat.py -> build/bdist.linux-armv7l/wheel/./seqmat 2025-11-01T08:42:53,440 copying build/lib/seqmat/transcript.py -> build/bdist.linux-armv7l/wheel/./seqmat 2025-11-01T08:42:53,443 running install_egg_info 2025-11-01T08:42:53,477 Copying seqmat.egg-info to build/bdist.linux-armv7l/wheel/./seqmat-0.1.32-py3.11.egg-info 2025-11-01T08:42:53,490 running install_scripts 2025-11-01T08:42:53,503 creating build/bdist.linux-armv7l/wheel/seqmat-0.1.32.dist-info/WHEEL 2025-11-01T08:42:53,506 creating '/tmp/pip-wheel-p07ibewt/seqmat-0.1.32-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-11-01T08:42:53,509 adding 'seqmat/__init__.py' 2025-11-01T08:42:53,511 adding 'seqmat/cli.py' 2025-11-01T08:42:53,512 adding 'seqmat/config.py' 2025-11-01T08:42:53,514 adding 'seqmat/gene.py' 2025-11-01T08:42:53,518 adding 'seqmat/seqmat.py' 2025-11-01T08:42:53,520 adding 'seqmat/transcript.py' 2025-11-01T08:42:53,526 adding 'seqmat/utils.py' 2025-11-01T08:42:53,528 adding 'seqmat-0.1.32.dist-info/licenses/LICENSE' 2025-11-01T08:42:53,530 adding 'tests/__init__.py' 2025-11-01T08:42:53,532 adding 'tests/test_gene.py' 2025-11-01T08:42:53,533 adding 'tests/test_seqmat.py' 2025-11-01T08:42:53,536 adding 'seqmat-0.1.32.dist-info/METADATA' 2025-11-01T08:42:53,538 adding 'seqmat-0.1.32.dist-info/WHEEL' 2025-11-01T08:42:53,539 adding 'seqmat-0.1.32.dist-info/entry_points.txt' 2025-11-01T08:42:53,540 adding 'seqmat-0.1.32.dist-info/top_level.txt' 2025-11-01T08:42:53,540 adding 'seqmat-0.1.32.dist-info/RECORD' 2025-11-01T08:42:53,542 removing build/bdist.linux-armv7l/wheel 2025-11-01T08:42:53,655 Building wheel for seqmat (setup.py): finished with status 'done' 2025-11-01T08:42:53,658 Created wheel for seqmat: filename=seqmat-0.1.32-py3-none-any.whl size=40709 sha256=10bb87130b7c8ca1c6a8fd67221fc71ebf341f8fdd128a8562c08c1a87cb4722 2025-11-01T08:42:53,659 Stored in directory: /tmp/pip-ephem-wheel-cache-z9q3un81/wheels/4d/8b/8c/74e074075c58d7d730e628e6212ea03cf65313cb80845d654b 2025-11-01T08:42:53,676 Successfully built seqmat 2025-11-01T08:42:53,680 Removed build tracker: '/tmp/pip-build-tracker-bj94fw9a'