2025-11-12T14:44:31,016 Created temporary directory: /tmp/pip-build-tracker-d9_690x3 2025-11-12T14:44:31,017 Initialized build tracking at /tmp/pip-build-tracker-d9_690x3 2025-11-12T14:44:31,017 Created build tracker: /tmp/pip-build-tracker-d9_690x3 2025-11-12T14:44:31,017 Entered build tracker: /tmp/pip-build-tracker-d9_690x3 2025-11-12T14:44:31,018 Created temporary directory: /tmp/pip-wheel-wxtmrjvc 2025-11-12T14:44:31,021 Created temporary directory: /tmp/pip-ephem-wheel-cache-k10tq4p9 2025-11-12T14:44:31,085 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-11-12T14:44:31,088 2 location(s) to search for versions of bgzip: 2025-11-12T14:44:31,088 * https://pypi.org/simple/bgzip/ 2025-11-12T14:44:31,088 * https://www.piwheels.org/simple/bgzip/ 2025-11-12T14:44:31,088 Fetching project page and analyzing links: https://pypi.org/simple/bgzip/ 2025-11-12T14:44:31,089 Getting page https://pypi.org/simple/bgzip/ 2025-11-12T14:44:31,090 Found index url https://pypi.org/simple/ 2025-11-12T14:44:31,240 Fetched page https://pypi.org/simple/bgzip/ as application/vnd.pypi.simple.v1+json 2025-11-12T14:44:31,245 Found link https://files.pythonhosted.org/packages/16/31/5c44418ae4c692f06634c350ac515915abbf26988dc36c3db0ad5bef7dc8/bgzip-0.0.2.tar.gz (from https://pypi.org/simple/bgzip/), version: 0.0.2 2025-11-12T14:44:31,245 Found link https://files.pythonhosted.org/packages/89/07/61299e64d9085fad3e42d21f0417639c80b0997046ad50e62f1394abace5/bgzip-0.1.0.tar.gz (from https://pypi.org/simple/bgzip/), version: 0.1.0 2025-11-12T14:44:31,246 Found link https://files.pythonhosted.org/packages/4f/11/5eb47568e6fd93b37c4c4e1dadd4d2b0586bf3ca49961ea278ed1d3e25ec/bgzip-0.2.0.tar.gz (from https://pypi.org/simple/bgzip/), version: 0.2.0 2025-11-12T14:44:31,246 Found link https://files.pythonhosted.org/packages/d1/47/fc15119cb529a00191390ee3946ccc0d51063892da41d52e57b011438e14/bgzip-0.2.1.tar.gz (from https://pypi.org/simple/bgzip/), version: 0.2.1 2025-11-12T14:44:31,247 Found link https://files.pythonhosted.org/packages/dd/65/f69f3a3eef5ffd9e8e1159f3ad95d1391e77ecdeeeb4b9b7256e16cf838f/bgzip-0.2.2.tar.gz (from https://pypi.org/simple/bgzip/), version: 0.2.2 2025-11-12T14:44:31,247 Found link https://files.pythonhosted.org/packages/60/8f/7178c73a962a9dce2901d9b4f0063579418a1ce9197be517a0576a03f73d/bgzip-0.3.0.tar.gz (from https://pypi.org/simple/bgzip/), version: 0.3.0 2025-11-12T14:44:31,248 Found link https://files.pythonhosted.org/packages/76/1e/e83f1af0bbbb4332e08a6c1b513ea003c008868c08fbcf2d80757c1e48c5/bgzip-0.3.1.tar.gz (from https://pypi.org/simple/bgzip/), version: 0.3.1 2025-11-12T14:44:31,248 Found link https://files.pythonhosted.org/packages/8a/31/697e749ca86468a79309ec21093506be15f8645f81fe0341f43aa2a85249/bgzip-0.3.2.tar.gz (from https://pypi.org/simple/bgzip/), version: 0.3.2 2025-11-12T14:44:31,249 Found link https://files.pythonhosted.org/packages/48/1f/f4b3e60ca8a62a30fdddf920e80c003175d4419867ce5b4aadb79efbc970/bgzip-0.3.3.tar.gz (from https://pypi.org/simple/bgzip/), version: 0.3.3 2025-11-12T14:44:31,249 Found link https://files.pythonhosted.org/packages/33/0c/2cd70a1170e6093e1e259f96ae3aa98721e670f3deea885c0114e928162b/bgzip-0.3.4.tar.gz (from https://pypi.org/simple/bgzip/), version: 0.3.4 2025-11-12T14:44:31,250 Found link https://files.pythonhosted.org/packages/0d/9e/d6f1c105cca14a7544e3d0465bc0a6566f65ef24fb9fa3d7a39ca3040215/bgzip-0.3.5.tar.gz (from https://pypi.org/simple/bgzip/), version: 0.3.5 2025-11-12T14:44:31,250 Found link https://files.pythonhosted.org/packages/28/fd/9c693ecdcfb16f9a0384feffa12423643ce25bf359007c830aaf94af0404/bgzip-0.4.0.tar.gz (from https://pypi.org/simple/bgzip/), version: 0.4.0 2025-11-12T14:44:31,251 Found link https://files.pythonhosted.org/packages/37/19/7612e1cd0083502286b3d1ea3dd1da552ce3f96b4c8e810ef186dfce7d61/bgzip-0.5.0.tar.gz (from https://pypi.org/simple/bgzip/), version: 0.5.0 2025-11-12T14:44:31,251 Found link https://files.pythonhosted.org/packages/91/3d/e389ca7a9ff0ec4805388cda2cd5e019360de45a8321f17e2fefb9a7375d/bgzip-0.5.1.tar.gz (from https://pypi.org/simple/bgzip/), version: 0.5.1 2025-11-12T14:44:31,252 Fetching project page and analyzing links: https://www.piwheels.org/simple/bgzip/ 2025-11-12T14:44:31,253 Getting page https://www.piwheels.org/simple/bgzip/ 2025-11-12T14:44:31,254 Found index url https://www.piwheels.org/simple/ 2025-11-12T14:44:31,359 Fetched page https://www.piwheels.org/simple/bgzip/ as text/html 2025-11-12T14:44:31,372 Skipping link: No binaries permitted for bgzip: https://www.piwheels.org/simple/bgzip/bgzip-0.5.1-cp311-cp311-linux_armv6l.whl#sha256=aa05d8ffdca183892df23348403ce2c84974037624dec9471a119a45a4e96885 (from https://www.piwheels.org/simple/bgzip/) 2025-11-12T14:44:31,372 Skipping link: No binaries permitted for bgzip: https://www.piwheels.org/simple/bgzip/bgzip-0.5.1-cp311-cp311-linux_armv7l.whl#sha256=aa05d8ffdca183892df23348403ce2c84974037624dec9471a119a45a4e96885 (from https://www.piwheels.org/simple/bgzip/) 2025-11-12T14:44:31,372 Skipping link: No binaries permitted for bgzip: https://archive1.piwheels.org/simple/bgzip/bgzip-0.5.0-cp311-cp311-linux_armv6l.whl#sha256=ae86811c8f8fc558b391c3d8fb3d9c3f8c58188ec2fc7b6031fba7a1de96d619 (from https://www.piwheels.org/simple/bgzip/) 2025-11-12T14:44:31,372 Skipping link: No binaries permitted for bgzip: https://archive1.piwheels.org/simple/bgzip/bgzip-0.5.0-cp311-cp311-linux_armv7l.whl#sha256=ae86811c8f8fc558b391c3d8fb3d9c3f8c58188ec2fc7b6031fba7a1de96d619 (from https://www.piwheels.org/simple/bgzip/) 2025-11-12T14:44:31,372 Skipping link: No binaries permitted for bgzip: https://archive1.piwheels.org/simple/bgzip/bgzip-0.5.0-cp37-cp37m-linux_armv6l.whl#sha256=ec01169856e1c113aa16294d3efe60b732371d02e15f992960680a193bf5eb15 (from https://www.piwheels.org/simple/bgzip/) 2025-11-12T14:44:31,373 Skipping link: No binaries permitted for bgzip: https://archive1.piwheels.org/simple/bgzip/bgzip-0.5.0-cp37-cp37m-linux_armv7l.whl#sha256=ec01169856e1c113aa16294d3efe60b732371d02e15f992960680a193bf5eb15 (from https://www.piwheels.org/simple/bgzip/) 2025-11-12T14:44:31,373 Skipping link: No binaries permitted for bgzip: https://archive1.piwheels.org/simple/bgzip/bgzip-0.5.0-cp39-cp39-linux_armv6l.whl#sha256=b239c0afe973c4d11df81aa23fa5fe48af87d11d4ba6e7848fe6da2913779eb5 (from https://www.piwheels.org/simple/bgzip/) 2025-11-12T14:44:31,373 Skipping link: No binaries permitted for bgzip: https://archive1.piwheels.org/simple/bgzip/bgzip-0.5.0-cp39-cp39-linux_armv7l.whl#sha256=b239c0afe973c4d11df81aa23fa5fe48af87d11d4ba6e7848fe6da2913779eb5 (from https://www.piwheels.org/simple/bgzip/) 2025-11-12T14:44:31,373 Skipping link: No binaries permitted for bgzip: https://archive1.piwheels.org/simple/bgzip/bgzip-0.5.0-cp313-cp313-linux_armv6l.whl#sha256=b93724f8c4d73bcfa9ca605e31c7ee07177849509f84195cd6635afdfab4b974 (from https://www.piwheels.org/simple/bgzip/) 2025-11-12T14:44:31,373 Skipping link: No binaries permitted for bgzip: https://archive1.piwheels.org/simple/bgzip/bgzip-0.5.0-cp313-cp313-linux_armv7l.whl#sha256=b93724f8c4d73bcfa9ca605e31c7ee07177849509f84195cd6635afdfab4b974 (from https://www.piwheels.org/simple/bgzip/) 2025-11-12T14:44:31,374 Skipping link: No binaries permitted for bgzip: https://archive1.piwheels.org/simple/bgzip/bgzip-0.4.0-cp37-cp37m-linux_armv6l.whl#sha256=497fca3f633659e81aaadd4151c58744af45041d5c193b023fdaaa2d39a86a6c (from https://www.piwheels.org/simple/bgzip/) 2025-11-12T14:44:31,374 Skipping link: No binaries permitted for bgzip: https://archive1.piwheels.org/simple/bgzip/bgzip-0.4.0-cp37-cp37m-linux_armv7l.whl#sha256=497fca3f633659e81aaadd4151c58744af45041d5c193b023fdaaa2d39a86a6c (from https://www.piwheels.org/simple/bgzip/) 2025-11-12T14:44:31,374 Skipping link: No binaries permitted for bgzip: https://archive1.piwheels.org/simple/bgzip/bgzip-0.4.0-cp39-cp39-linux_armv6l.whl#sha256=a0594e3a18b486a6727e5170a2af454a7a4a9c414a3444af7b61bca9320a2da5 (from https://www.piwheels.org/simple/bgzip/) 2025-11-12T14:44:31,374 Skipping link: No binaries permitted for bgzip: https://archive1.piwheels.org/simple/bgzip/bgzip-0.4.0-cp39-cp39-linux_armv7l.whl#sha256=a0594e3a18b486a6727e5170a2af454a7a4a9c414a3444af7b61bca9320a2da5 (from https://www.piwheels.org/simple/bgzip/) 2025-11-12T14:44:31,374 Skipping link: No binaries permitted for bgzip: https://archive1.piwheels.org/simple/bgzip/bgzip-0.3.5-cp37-cp37m-linux_armv6l.whl#sha256=89482ada4af3117fcae38aa00a7063a98fcd084da6cf3d8ff11068ac27a42743 (from https://www.piwheels.org/simple/bgzip/) 2025-11-12T14:44:31,374 Skipping link: No binaries permitted for bgzip: https://archive1.piwheels.org/simple/bgzip/bgzip-0.3.5-cp37-cp37m-linux_armv7l.whl#sha256=89482ada4af3117fcae38aa00a7063a98fcd084da6cf3d8ff11068ac27a42743 (from https://www.piwheels.org/simple/bgzip/) 2025-11-12T14:44:31,375 Skipping link: No binaries permitted for bgzip: https://archive1.piwheels.org/simple/bgzip/bgzip-0.3.5-cp39-cp39-linux_armv6l.whl#sha256=e1847dd24562bf2b37c9699e1afa5bffdb6bedaa37a4e4eccd8c3aa3b5116234 (from https://www.piwheels.org/simple/bgzip/) 2025-11-12T14:44:31,375 Skipping link: No binaries permitted for bgzip: https://archive1.piwheels.org/simple/bgzip/bgzip-0.3.5-cp39-cp39-linux_armv7l.whl#sha256=e1847dd24562bf2b37c9699e1afa5bffdb6bedaa37a4e4eccd8c3aa3b5116234 (from https://www.piwheels.org/simple/bgzip/) 2025-11-12T14:44:31,375 Skipping link: No binaries permitted for bgzip: https://archive1.piwheels.org/simple/bgzip/bgzip-0.3.3-cp37-cp37m-linux_armv7l.whl#sha256=685fb340167e19c704365470d52898dc7016f10783f43c59b94be79c092e0000 (from https://www.piwheels.org/simple/bgzip/) 2025-11-12T14:44:31,375 Skipping link: No binaries permitted for bgzip: https://archive1.piwheels.org/simple/bgzip/bgzip-0.3.3-cp37-cp37m-linux_armv6l.whl#sha256=685fb340167e19c704365470d52898dc7016f10783f43c59b94be79c092e0000 (from https://www.piwheels.org/simple/bgzip/) 2025-11-12T14:44:31,375 Skipping link: No binaries permitted for bgzip: https://archive1.piwheels.org/simple/bgzip/bgzip-0.3.3-cp39-cp39-linux_armv6l.whl#sha256=92d13225d5ca64055fb1207c069ec5f8bd524d9042b49277ac38cdf09b2809fe (from https://www.piwheels.org/simple/bgzip/) 2025-11-12T14:44:31,376 Skipping link: No binaries permitted for bgzip: https://archive1.piwheels.org/simple/bgzip/bgzip-0.3.3-cp39-cp39-linux_armv7l.whl#sha256=92d13225d5ca64055fb1207c069ec5f8bd524d9042b49277ac38cdf09b2809fe (from https://www.piwheels.org/simple/bgzip/) 2025-11-12T14:44:31,376 Skipping link: No binaries permitted for bgzip: https://archive1.piwheels.org/simple/bgzip/bgzip-0.3.2-cp37-cp37m-linux_armv7l.whl#sha256=2aac95b731f1a598b6fc666516810f1dbd916b8eeb7c4a61f25d82e52ca6bf94 (from https://www.piwheels.org/simple/bgzip/) 2025-11-12T14:44:31,376 Skipping link: No binaries permitted for bgzip: https://archive1.piwheels.org/simple/bgzip/bgzip-0.3.2-cp37-cp37m-linux_armv6l.whl#sha256=2aac95b731f1a598b6fc666516810f1dbd916b8eeb7c4a61f25d82e52ca6bf94 (from https://www.piwheels.org/simple/bgzip/) 2025-11-12T14:44:31,376 Skipping link: No binaries permitted for bgzip: https://archive1.piwheels.org/simple/bgzip/bgzip-0.3.2-cp39-cp39-linux_armv6l.whl#sha256=9a3e9fe3b7cfd523c0d07773f63c88a5e59119ec6f52d12b2fbe40dd7e58a5e3 (from https://www.piwheels.org/simple/bgzip/) 2025-11-12T14:44:31,376 Skipping link: No binaries permitted for bgzip: https://archive1.piwheels.org/simple/bgzip/bgzip-0.3.2-cp39-cp39-linux_armv7l.whl#sha256=9a3e9fe3b7cfd523c0d07773f63c88a5e59119ec6f52d12b2fbe40dd7e58a5e3 (from https://www.piwheels.org/simple/bgzip/) 2025-11-12T14:44:31,376 Skipping link: No binaries permitted for bgzip: https://archive1.piwheels.org/simple/bgzip/bgzip-0.3.1-cp37-cp37m-linux_armv6l.whl#sha256=341ef1fbff76478f4fe1cad0a4eeed342b694a87cd0a76619da8de9ca40ee12d (from https://www.piwheels.org/simple/bgzip/) 2025-11-12T14:44:31,377 Skipping link: No binaries permitted for bgzip: https://archive1.piwheels.org/simple/bgzip/bgzip-0.3.1-cp37-cp37m-linux_armv7l.whl#sha256=341ef1fbff76478f4fe1cad0a4eeed342b694a87cd0a76619da8de9ca40ee12d (from https://www.piwheels.org/simple/bgzip/) 2025-11-12T14:44:31,377 Skipping link: No binaries permitted for bgzip: https://archive1.piwheels.org/simple/bgzip/bgzip-0.3.1-cp39-cp39-linux_armv6l.whl#sha256=f4e684199833e3704f4d0e1b7e6b36eda34abfdaffd92f0a9792895386ba1f26 (from https://www.piwheels.org/simple/bgzip/) 2025-11-12T14:44:31,377 Skipping link: No binaries permitted for bgzip: 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https://www.piwheels.org/simple/bgzip/) 2025-11-12T14:44:31,379 Skipping link: No binaries permitted for bgzip: https://archive1.piwheels.org/simple/bgzip/bgzip-0.2.1-cp39-cp39-linux_armv6l.whl#sha256=ceb61a1462b1e3c8f56d23cbea70e012e49b582f0b98dae26d1dcd024456c4da (from https://www.piwheels.org/simple/bgzip/) 2025-11-12T14:44:31,379 Skipping link: No binaries permitted for bgzip: https://archive1.piwheels.org/simple/bgzip/bgzip-0.2.1-cp39-cp39-linux_armv7l.whl#sha256=ceb61a1462b1e3c8f56d23cbea70e012e49b582f0b98dae26d1dcd024456c4da (from https://www.piwheels.org/simple/bgzip/) 2025-11-12T14:44:31,379 Skipping link: No binaries permitted for bgzip: https://archive1.piwheels.org/simple/bgzip/bgzip-0.2.0-cp37-cp37m-linux_armv6l.whl#sha256=4f1acf6bceb3ef28fdaf198fceb8430eaffa0771e44d13947573084286786891 (from https://www.piwheels.org/simple/bgzip/) 2025-11-12T14:44:31,379 Skipping link: No binaries permitted for bgzip: https://archive1.piwheels.org/simple/bgzip/bgzip-0.2.0-cp37-cp37m-linux_armv7l.whl#sha256=4f1acf6bceb3ef28fdaf198fceb8430eaffa0771e44d13947573084286786891 (from https://www.piwheels.org/simple/bgzip/) 2025-11-12T14:44:31,380 Skipping link: No binaries permitted for bgzip: https://archive1.piwheels.org/simple/bgzip/bgzip-0.2.0-cp39-cp39-linux_armv6l.whl#sha256=5942e741b3ae3ad6cdf2805d453d0c5f532d1dbb0207cd2271ee5d25a6c7bddb (from https://www.piwheels.org/simple/bgzip/) 2025-11-12T14:44:31,380 Skipping link: No binaries permitted for bgzip: https://archive1.piwheels.org/simple/bgzip/bgzip-0.2.0-cp39-cp39-linux_armv7l.whl#sha256=5942e741b3ae3ad6cdf2805d453d0c5f532d1dbb0207cd2271ee5d25a6c7bddb (from https://www.piwheels.org/simple/bgzip/) 2025-11-12T14:44:31,380 Skipping link: No binaries permitted for bgzip: https://archive1.piwheels.org/simple/bgzip/bgzip-0.1.0-cp37-cp37m-linux_armv6l.whl#sha256=61e029443a17d3913ddc7241fe69118facde97d325acaaf7805a69a3cd2bf641 (from https://www.piwheels.org/simple/bgzip/) 2025-11-12T14:44:31,380 Skipping link: No binaries permitted for bgzip: https://archive1.piwheels.org/simple/bgzip/bgzip-0.1.0-cp37-cp37m-linux_armv7l.whl#sha256=61e029443a17d3913ddc7241fe69118facde97d325acaaf7805a69a3cd2bf641 (from https://www.piwheels.org/simple/bgzip/) 2025-11-12T14:44:31,380 Skipping link: No binaries permitted for bgzip: https://archive1.piwheels.org/simple/bgzip/bgzip-0.1.0-cp39-cp39-linux_armv6l.whl#sha256=2e00855610935c7026c95b74f10784d55cccf0476ba655c6aa2b8746d5a856b8 (from https://www.piwheels.org/simple/bgzip/) 2025-11-12T14:44:31,380 Skipping link: No binaries permitted for bgzip: https://archive1.piwheels.org/simple/bgzip/bgzip-0.1.0-cp39-cp39-linux_armv7l.whl#sha256=2e00855610935c7026c95b74f10784d55cccf0476ba655c6aa2b8746d5a856b8 (from https://www.piwheels.org/simple/bgzip/) 2025-11-12T14:44:31,381 Skipping link: No binaries permitted for bgzip: https://archive1.piwheels.org/simple/bgzip/bgzip-0.0.2-cp37-cp37m-linux_armv6l.whl#sha256=286d7438f1dcf95c428f77928dc91fd7770179d100ea2d1ba96d283bff0007e6 (from https://www.piwheels.org/simple/bgzip/) 2025-11-12T14:44:31,381 Skipping link: No binaries permitted for bgzip: https://archive1.piwheels.org/simple/bgzip/bgzip-0.0.2-cp37-cp37m-linux_armv7l.whl#sha256=286d7438f1dcf95c428f77928dc91fd7770179d100ea2d1ba96d283bff0007e6 (from https://www.piwheels.org/simple/bgzip/) 2025-11-12T14:44:31,381 Skipping link: No binaries permitted for bgzip: https://archive1.piwheels.org/simple/bgzip/bgzip-0.0.2-cp39-cp39-linux_armv6l.whl#sha256=f87e766596786773b3a7956bf318cb8eca77b1d29b9e7dce168383ab5ba2520d (from https://www.piwheels.org/simple/bgzip/) 2025-11-12T14:44:31,381 Skipping link: No binaries permitted for bgzip: https://archive1.piwheels.org/simple/bgzip/bgzip-0.0.2-cp39-cp39-linux_armv7l.whl#sha256=f87e766596786773b3a7956bf318cb8eca77b1d29b9e7dce168383ab5ba2520d (from https://www.piwheels.org/simple/bgzip/) 2025-11-12T14:44:31,381 Skipping link: not a file: https://www.piwheels.org/simple/bgzip/ 2025-11-12T14:44:31,382 Skipping link: not a file: https://pypi.org/simple/bgzip/ 2025-11-12T14:44:31,405 Given no hashes to check 1 links for project 'bgzip': discarding no candidates 2025-11-12T14:44:31,406 Collecting bgzip==0.5.1 2025-11-12T14:44:31,407 Created temporary directory: /tmp/pip-unpack-ocb5nyby 2025-11-12T14:44:31,468 Downloading bgzip-0.5.1.tar.gz (112 kB) 2025-11-12T14:44:31,540 Added bgzip==0.5.1 from https://files.pythonhosted.org/packages/91/3d/e389ca7a9ff0ec4805388cda2cd5e019360de45a8321f17e2fefb9a7375d/bgzip-0.5.1.tar.gz to build tracker '/tmp/pip-build-tracker-d9_690x3' 2025-11-12T14:44:31,542 Running setup.py (path:/tmp/pip-wheel-wxtmrjvc/bgzip_3e303a3eeee24847a7d607aeb01bb520/setup.py) egg_info for package bgzip 2025-11-12T14:44:31,543 Created temporary directory: /tmp/pip-pip-egg-info-o60dbrti 2025-11-12T14:44:31,543 Preparing metadata (setup.py): started 2025-11-12T14:44:31,544 Running command python setup.py egg_info 2025-11-12T14:44:32,327 /usr/local/lib/python3.13/dist-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'test_suite' 2025-11-12T14:44:32,327 warnings.warn(msg) 2025-11-12T14:44:32,731 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-11-12T14:44:32,731 !! 2025-11-12T14:44:32,732 ******************************************************************************** 2025-11-12T14:44:32,732 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-11-12T14:44:32,732 License :: OSI Approved :: MIT License 2025-11-12T14:44:32,732 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-11-12T14:44:32,732 ******************************************************************************** 2025-11-12T14:44:32,732 !! 2025-11-12T14:44:32,732 self._finalize_license_expression() 2025-11-12T14:44:32,804 running egg_info 2025-11-12T14:44:32,878 creating /tmp/pip-pip-egg-info-o60dbrti/bgzip.egg-info 2025-11-12T14:44:32,878 writing /tmp/pip-pip-egg-info-o60dbrti/bgzip.egg-info/PKG-INFO 2025-11-12T14:44:32,880 writing dependency_links to /tmp/pip-pip-egg-info-o60dbrti/bgzip.egg-info/dependency_links.txt 2025-11-12T14:44:32,880 writing top-level names to /tmp/pip-pip-egg-info-o60dbrti/bgzip.egg-info/top_level.txt 2025-11-12T14:44:32,881 writing manifest file '/tmp/pip-pip-egg-info-o60dbrti/bgzip.egg-info/SOURCES.txt' 2025-11-12T14:44:33,174 reading manifest file '/tmp/pip-pip-egg-info-o60dbrti/bgzip.egg-info/SOURCES.txt' 2025-11-12T14:44:33,175 reading manifest template 'MANIFEST.in' 2025-11-12T14:44:33,176 adding license file 'LICENSE' 2025-11-12T14:44:33,179 writing manifest file '/tmp/pip-pip-egg-info-o60dbrti/bgzip.egg-info/SOURCES.txt' 2025-11-12T14:44:33,293 Preparing metadata (setup.py): finished with status 'done' 2025-11-12T14:44:33,297 Source in /tmp/pip-wheel-wxtmrjvc/bgzip_3e303a3eeee24847a7d607aeb01bb520 has version 0.5.1, which satisfies requirement bgzip==0.5.1 from https://files.pythonhosted.org/packages/91/3d/e389ca7a9ff0ec4805388cda2cd5e019360de45a8321f17e2fefb9a7375d/bgzip-0.5.1.tar.gz 2025-11-12T14:44:33,298 Removed bgzip==0.5.1 from https://files.pythonhosted.org/packages/91/3d/e389ca7a9ff0ec4805388cda2cd5e019360de45a8321f17e2fefb9a7375d/bgzip-0.5.1.tar.gz from build tracker '/tmp/pip-build-tracker-d9_690x3' 2025-11-12T14:44:33,301 Created temporary directory: /tmp/pip-unpack-5hdoicnz 2025-11-12T14:44:33,301 Created temporary directory: /tmp/pip-unpack-dvmr9dwh 2025-11-12T14:44:33,301 Building wheels for collected packages: bgzip 2025-11-12T14:44:33,303 Created temporary directory: /tmp/pip-wheel-w71b2ney 2025-11-12T14:44:33,303 DEPRECATION: Building 'bgzip' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'bgzip'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-11-12T14:44:33,304 Building wheel for bgzip (setup.py): started 2025-11-12T14:44:33,305 Destination directory: /tmp/pip-wheel-w71b2ney 2025-11-12T14:44:33,305 Running command python setup.py bdist_wheel 2025-11-12T14:44:33,999 /usr/local/lib/python3.13/dist-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'test_suite' 2025-11-12T14:44:34,000 warnings.warn(msg) 2025-11-12T14:44:34,389 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-11-12T14:44:34,389 !! 2025-11-12T14:44:34,390 ******************************************************************************** 2025-11-12T14:44:34,390 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-11-12T14:44:34,390 License :: OSI Approved :: MIT License 2025-11-12T14:44:34,390 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-11-12T14:44:34,390 ******************************************************************************** 2025-11-12T14:44:34,390 !! 2025-11-12T14:44:34,390 self._finalize_license_expression() 2025-11-12T14:44:34,391 running bdist_wheel 2025-11-12T14:44:34,755 running build 2025-11-12T14:44:34,756 running build_py 2025-11-12T14:44:34,832 creating build/lib.linux-armv7l-cpython-313/bgzip 2025-11-12T14:44:34,832 copying bgzip/version.py -> build/lib.linux-armv7l-cpython-313/bgzip 2025-11-12T14:44:34,833 copying bgzip/__init__.py -> build/lib.linux-armv7l-cpython-313/bgzip 2025-11-12T14:44:34,834 running build_ext 2025-11-12T14:44:35,178 building 'bgzip.bgzip_utils' extension 2025-11-12T14:44:35,178 creating build/temp.linux-armv7l-cpython-313/bgzip_utils 2025-11-12T14:44:35,179 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -I/usr/include/python3.13 -c bgzip_utils/bgzip_utils.c -o build/temp.linux-armv7l-cpython-313/bgzip_utils/bgzip_utils.o -O3 -fopenmp 2025-11-12T14:44:35,598 bgzip_utils/bgzip_utils.c: In function ‘__pyx_pf_11bgzip_utils_inflate_chunks’: 2025-11-12T14:44:35,603 bgzip_utils/bgzip_utils.c:5413:76: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘Py_ssize_t’ {aka ‘int’} [-Wsign-compare] 2025-11-12T14:44:35,603 5413 | __pyx_t_4 = ((__pyx_cur_scope->__pyx_v_chunks[__pyx_v_i]).bytes_read < __pyx_t_2); 2025-11-12T14:44:35,603 | ^ 2025-11-12T14:44:38,674 bgzip_utils/bgzip_utils.c: In function ‘__pyx_pf_11bgzip_utils_inflate_chunks._omp_fn.0’: 2025-11-12T14:44:38,679 bgzip_utils/bgzip_utils.c:5273:138: warning: ‘__pyx_clineno’ may be used uninitialized [-Wmaybe-uninitialized] 2025-11-12T14:44:38,679 5273 | __pyx_parallel_filename = __pyx_filename; __pyx_parallel_lineno = __pyx_lineno; __pyx_parallel_clineno = __pyx_clineno; 2025-11-12T14:44:38,679 | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ 2025-11-12T14:44:38,684 bgzip_utils/bgzip_utils.c:4891:7: note: ‘__pyx_clineno’ was declared here 2025-11-12T14:44:38,684 4891 | int __pyx_clineno = 0; 2025-11-12T14:44:38,684 | ^~~~~~~~~~~~~ 2025-11-12T14:44:39,640 bgzip_utils/bgzip_utils.c: In function ‘__pyx_pf_11bgzip_utils_2deflate_to_buffers._omp_fn.0’: 2025-11-12T14:44:39,646 bgzip_utils/bgzip_utils.c:6610:138: warning: ‘__pyx_clineno’ may be used uninitialized [-Wmaybe-uninitialized] 2025-11-12T14:44:39,646 6610 | __pyx_parallel_filename = __pyx_filename; __pyx_parallel_lineno = __pyx_lineno; __pyx_parallel_clineno = __pyx_clineno; 2025-11-12T14:44:39,646 | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ 2025-11-12T14:44:39,653 bgzip_utils/bgzip_utils.c:6236:7: note: ‘__pyx_clineno’ was declared here 2025-11-12T14:44:39,653 6236 | int __pyx_clineno = 0; 2025-11-12T14:44:39,653 | ^~~~~~~~~~~~~ 2025-11-12T14:44:46,247 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-313/bgzip_utils/bgzip_utils.o -L/usr/lib/arm-linux-gnueabihf -lz -o build/lib.linux-armv7l-cpython-313/bgzip/bgzip_utils.cpython-313-arm-linux-gnueabihf.so -fopenmp 2025-11-12T14:44:46,473 /usr/local/lib/python3.13/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2025-11-12T14:44:46,474 !! 2025-11-12T14:44:46,474 ******************************************************************************** 2025-11-12T14:44:46,474 Please avoid running ``setup.py`` directly. 2025-11-12T14:44:46,474 Instead, use pypa/build, pypa/installer or other 2025-11-12T14:44:46,474 standards-based tools. 2025-11-12T14:44:46,474 This deprecation is overdue, please update your project and remove deprecated 2025-11-12T14:44:46,474 calls to avoid build errors in the future. 2025-11-12T14:44:46,475 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2025-11-12T14:44:46,475 ******************************************************************************** 2025-11-12T14:44:46,475 !! 2025-11-12T14:44:46,475 self.initialize_options() 2025-11-12T14:44:46,547 installing to build/bdist.linux-armv7l/wheel 2025-11-12T14:44:46,547 running install 2025-11-12T14:44:46,570 running install_lib 2025-11-12T14:44:46,642 creating build/bdist.linux-armv7l/wheel 2025-11-12T14:44:46,643 creating build/bdist.linux-armv7l/wheel/bgzip 2025-11-12T14:44:46,643 copying build/lib.linux-armv7l-cpython-313/bgzip/bgzip_utils.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./bgzip 2025-11-12T14:44:46,646 copying build/lib.linux-armv7l-cpython-313/bgzip/__init__.py -> build/bdist.linux-armv7l/wheel/./bgzip 2025-11-12T14:44:46,646 copying build/lib.linux-armv7l-cpython-313/bgzip/version.py -> build/bdist.linux-armv7l/wheel/./bgzip 2025-11-12T14:44:46,647 running install_egg_info 2025-11-12T14:44:46,723 running egg_info 2025-11-12T14:44:46,797 writing bgzip.egg-info/PKG-INFO 2025-11-12T14:44:46,798 writing dependency_links to bgzip.egg-info/dependency_links.txt 2025-11-12T14:44:46,799 writing top-level names to bgzip.egg-info/top_level.txt 2025-11-12T14:44:46,874 reading manifest file 'bgzip.egg-info/SOURCES.txt' 2025-11-12T14:44:46,876 reading manifest template 'MANIFEST.in' 2025-11-12T14:44:46,877 adding license file 'LICENSE' 2025-11-12T14:44:46,880 writing manifest file 'bgzip.egg-info/SOURCES.txt' 2025-11-12T14:44:46,880 Copying bgzip.egg-info to build/bdist.linux-armv7l/wheel/./bgzip-0.5.1-py3.13.egg-info 2025-11-12T14:44:46,882 running install_scripts 2025-11-12T14:44:46,931 creating build/bdist.linux-armv7l/wheel/bgzip-0.5.1.dist-info/WHEEL 2025-11-12T14:44:46,932 creating '/tmp/pip-wheel-w71b2ney/bgzip-0.5.1-cp313-cp313-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-11-12T14:44:46,934 adding 'bgzip/__init__.py' 2025-11-12T14:44:47,053 adding 'bgzip/bgzip_utils.cpython-313-arm-linux-gnueabihf.so' 2025-11-12T14:44:47,057 adding 'bgzip/version.py' 2025-11-12T14:44:47,058 adding 'bgzip-0.5.1.dist-info/licenses/LICENSE' 2025-11-12T14:44:47,059 adding 'bgzip-0.5.1.dist-info/METADATA' 2025-11-12T14:44:47,059 adding 'bgzip-0.5.1.dist-info/WHEEL' 2025-11-12T14:44:47,060 adding 'bgzip-0.5.1.dist-info/top_level.txt' 2025-11-12T14:44:47,060 adding 'bgzip-0.5.1.dist-info/RECORD' 2025-11-12T14:44:47,061 removing build/bdist.linux-armv7l/wheel 2025-11-12T14:44:47,218 Building wheel for bgzip (setup.py): finished with status 'done' 2025-11-12T14:44:47,222 Created wheel for bgzip: filename=bgzip-0.5.1-cp313-cp313-linux_armv7l.whl size=230152 sha256=8d3985fe10fbc7da5c7bf1d27f7e7457cbfb623c89f1f45e41c5dba44126eb2f 2025-11-12T14:44:47,223 Stored in directory: /tmp/pip-ephem-wheel-cache-k10tq4p9/wheels/1a/11/48/07114b49b0ff49290bfad645c3cb5b49e004b574885a5a2504 2025-11-12T14:44:47,231 Successfully built bgzip 2025-11-12T14:44:47,233 Removed build tracker: '/tmp/pip-build-tracker-d9_690x3'