2025-11-14T15:07:02,327 Created temporary directory: /tmp/pip-ephem-wheel-cache-kf1tr8c2 2025-11-14T15:07:02,329 Created temporary directory: /tmp/pip-build-tracker-zxwbf_b5 2025-11-14T15:07:02,329 Initialized build tracking at /tmp/pip-build-tracker-zxwbf_b5 2025-11-14T15:07:02,330 Created build tracker: /tmp/pip-build-tracker-zxwbf_b5 2025-11-14T15:07:02,330 Entered build tracker: /tmp/pip-build-tracker-zxwbf_b5 2025-11-14T15:07:02,331 Created temporary directory: /tmp/pip-wheel-piffk90_ 2025-11-14T15:07:02,334 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2025-11-14T15:07:02,336 Created temporary directory: /tmp/pip-ephem-wheel-cache-amov5v_0 2025-11-14T15:07:02,357 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-11-14T15:07:02,361 2 location(s) to search for versions of ont-bonito: 2025-11-14T15:07:02,361 * https://pypi.org/simple/ont-bonito/ 2025-11-14T15:07:02,361 * https://www.piwheels.org/simple/ont-bonito/ 2025-11-14T15:07:02,362 Fetching project page and analyzing links: https://pypi.org/simple/ont-bonito/ 2025-11-14T15:07:02,362 Getting page https://pypi.org/simple/ont-bonito/ 2025-11-14T15:07:02,364 Found index url https://pypi.org/simple 2025-11-14T15:07:02,577 Fetched page https://pypi.org/simple/ont-bonito/ as application/vnd.pypi.simple.v1+json 2025-11-14T15:07:02,588 Found link https://files.pythonhosted.org/packages/d9/db/561675d546075abac5f22cd30a78c084af0cf6aa376ace242405b801658f/ont-bonito-0.0.1.tar.gz (from https://pypi.org/simple/ont-bonito/), version: 0.0.1 2025-11-14T15:07:02,589 Found link https://files.pythonhosted.org/packages/1e/d1/8e91e83711e166c9da2dd39017c9ac471c516b87b48bcdc0e25a4cb12d95/ont-bonito-0.0.3.tar.gz (from https://pypi.org/simple/ont-bonito/), version: 0.0.3 2025-11-14T15:07:02,590 Found link https://files.pythonhosted.org/packages/e6/97/ee764ddc586c5fcf9be804289a26d80ce31a1eabfd550b1276dead9b9de1/ont-bonito-0.0.4.tar.gz (from https://pypi.org/simple/ont-bonito/), version: 0.0.4 2025-11-14T15:07:02,591 Found link https://files.pythonhosted.org/packages/51/2a/771af15029be16025022b91ee7675af7945fc0350e3c1190c7d1cad934d3/ont-bonito-0.0.5.tar.gz (from https://pypi.org/simple/ont-bonito/), version: 0.0.5 2025-11-14T15:07:02,592 Found link https://files.pythonhosted.org/packages/60/99/f9b4e7db2b81d07ca49873fef96a1d3378248ee8730cf07fda1231cd8910/ont-bonito-0.0.7.tar.gz (from https://pypi.org/simple/ont-bonito/), version: 0.0.7 2025-11-14T15:07:02,593 Found link https://files.pythonhosted.org/packages/3a/cc/a64e90955addd8b831e43decc9ee2cd8f8395c7c44ceef250bc60f2550f8/ont-bonito-0.0.8.tar.gz (from https://pypi.org/simple/ont-bonito/), version: 0.0.8 2025-11-14T15:07:02,594 Found link https://files.pythonhosted.org/packages/29/db/59fef46c323e86347b7558ad3c5a775037ef6923bc62b7e15173fefeed82/ont-bonito-0.1.0.tar.gz (from https://pypi.org/simple/ont-bonito/), version: 0.1.0 2025-11-14T15:07:02,595 Found link https://files.pythonhosted.org/packages/78/52/9f978f27aa96ccbb07ed86f25d599c28c80f41f6414f8035372e7acc00f6/ont-bonito-0.1.2.tar.gz (from https://pypi.org/simple/ont-bonito/), version: 0.1.2 2025-11-14T15:07:02,595 Found link https://files.pythonhosted.org/packages/9c/53/044d2ab2e0d2c00f5331aa4f1623c888dbc818c7fba70d069d80529ed113/ont-bonito-0.1.3.tar.gz (from https://pypi.org/simple/ont-bonito/), version: 0.1.3 2025-11-14T15:07:02,596 Found link https://files.pythonhosted.org/packages/59/8d/0c2eb31f833160e51648eae8d49bd6610bd6fad6ae5879e22a76187b5979/ont-bonito-0.1.4.tar.gz (from https://pypi.org/simple/ont-bonito/), version: 0.1.4 2025-11-14T15:07:02,597 Found link https://files.pythonhosted.org/packages/95/fa/8a178168ee44c7f66a4239e4a2a1569896e787397080d1e1e0c2b1a331c2/ont-bonito-0.1.5.tar.gz (from https://pypi.org/simple/ont-bonito/), version: 0.1.5 2025-11-14T15:07:02,597 Found link https://files.pythonhosted.org/packages/43/3a/37759ab5cca2b641f6e8000ad79cf4c86708efd3a1a1cafd4112ca7abcc7/ont-bonito-0.2.0a1.tar.gz (from https://pypi.org/simple/ont-bonito/), version: 0.2.0a1 2025-11-14T15:07:02,598 Found link https://files.pythonhosted.org/packages/9f/92/8bc665b17c156ddd88ca5d5aab8a0df099ffb508068ca6b773aa5695973b/ont-bonito-0.2.0.tar.gz (from https://pypi.org/simple/ont-bonito/), version: 0.2.0 2025-11-14T15:07:02,599 Found link 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https://files.pythonhosted.org/packages/69/84/727b764926e98bdb04998e2245cbbea2913b8f08a3e4804b304382e53272/ont-bonito-0.4.0a0.tar.gz (from https://pypi.org/simple/ont-bonito/), version: 0.4.0a0 2025-11-14T15:07:02,613 Found link https://files.pythonhosted.org/packages/50/d4/80be7268492c2e8862d883ad668761548b3ef2f6d5593b03b4ec872e8e77/ont-bonito-0.4.0.tar.gz (from https://pypi.org/simple/ont-bonito/), version: 0.4.0 2025-11-14T15:07:02,614 Found link https://files.pythonhosted.org/packages/8a/1e/66b8a54e3a834ace2ca7da0cdcddb8e8aba6378a1138eae8d23a69717365/ont-bonito-0.5.0a0.tar.gz (from https://pypi.org/simple/ont-bonito/), version: 0.5.0a0 2025-11-14T15:07:02,614 Found link https://files.pythonhosted.org/packages/c0/67/767711facb8ba83705205c97200da7c38ee237ea4f75ac238837a34470d7/ont-bonito-0.5.0.tar.gz (from https://pypi.org/simple/ont-bonito/), version: 0.5.0 2025-11-14T15:07:02,615 Found link https://files.pythonhosted.org/packages/c3/83/92100e7d0d0c2f6fe308e0b59abca48abbc0964ae8ebe7ba3661db363d3f/ont-bonito-0.5.1a0.tar.gz (from https://pypi.org/simple/ont-bonito/), version: 0.5.1a0 2025-11-14T15:07:02,615 Found link https://files.pythonhosted.org/packages/83/01/fd86e1b52f88835a57a95fffd87310b45943c2638d7f0d5ddc5d5d79f963/ont-bonito-0.5.1.tar.gz (from https://pypi.org/simple/ont-bonito/), version: 0.5.1 2025-11-14T15:07:02,616 Found link https://files.pythonhosted.org/packages/fb/c4/ac0604938255e78079971e40d5c3f899c8a4da86b55555459cdcf84800ef/ont-bonito-0.5.2.tar.gz (from https://pypi.org/simple/ont-bonito/), version: 0.5.2 2025-11-14T15:07:02,617 Found link https://files.pythonhosted.org/packages/c7/56/99ed87537a1bca4e37db92bc863e5b930911b12c5326da698f2250b0ca78/ont-bonito-0.5.3.tar.gz (from https://pypi.org/simple/ont-bonito/), version: 0.5.3 2025-11-14T15:07:02,618 Found link https://files.pythonhosted.org/packages/5c/88/be3977f52a9f5d4c220ce5ba1c2ee13b86e190f1fec97fc1c7a8c1f38cbc/ont-bonito-0.6.0a0.tar.gz (from https://pypi.org/simple/ont-bonito/), version: 0.6.0a0 2025-11-14T15:07:02,618 Found link https://files.pythonhosted.org/packages/76/c6/80785be7f0c43e8547741e2e39c3ce03fc46bced660fe92662830b70fc39/ont-bonito-0.6.0.tar.gz (from https://pypi.org/simple/ont-bonito/), version: 0.6.0 2025-11-14T15:07:02,619 Found link https://files.pythonhosted.org/packages/44/81/fd2d05d745a203673a8540581af478b9c9e512e866e813efde040816a9dd/ont-bonito-0.6.1.tar.gz (from https://pypi.org/simple/ont-bonito/), version: 0.6.1 2025-11-14T15:07:02,620 Found link https://files.pythonhosted.org/packages/4a/65/64a411f93b81cacf9df362e6b287fc0558cbf39aa00749e960446aa9d6d5/ont-bonito-0.6.2.tar.gz (from https://pypi.org/simple/ont-bonito/), version: 0.6.2 2025-11-14T15:07:02,620 Found link https://files.pythonhosted.org/packages/25/93/edefed8f84d0d26f786ceac1127f34994d83d3bd9008cc36417628b52a29/ont-bonito-0.7.0.tar.gz (from https://pypi.org/simple/ont-bonito/), version: 0.7.0 2025-11-14T15:07:02,621 Found link https://files.pythonhosted.org/packages/ef/ad/ebed4ae6c1b2a7ddeb2c5af2c6fc84ad964cc2f326970dafbb0e75d9d18b/ont-bonito-0.7.1.tar.gz (from https://pypi.org/simple/ont-bonito/), version: 0.7.1 2025-11-14T15:07:02,622 Found link https://files.pythonhosted.org/packages/c8/fe/dbe281544dff26a76fc448d50eaa05b45a6bcf114f48485db4e0d90bb0d4/ont-bonito-0.7.2.tar.gz (from https://pypi.org/simple/ont-bonito/), version: 0.7.2 2025-11-14T15:07:02,623 Found link https://files.pythonhosted.org/packages/f9/c5/0809ab32bc8e8df3b68de4c58a385541fa25f16ff909084ce59d6a2c3410/ont-bonito-0.7.3.tar.gz (from https://pypi.org/simple/ont-bonito/), version: 0.7.3 2025-11-14T15:07:02,624 Found link https://files.pythonhosted.org/packages/f2/e9/2310bc3981df09815f6899a70792e6799233e7aa2b931f70b0aa60376816/ont-bonito-0.8.1.tar.gz (from https://pypi.org/simple/ont-bonito/) (requires-python:>=3.8), version: 0.8.1 2025-11-14T15:07:02,625 Found link https://files.pythonhosted.org/packages/f3/7c/54fa467d6de3e141d53a28b9d558bcd9958312c6b0b25e434b9056c1e18b/ont_bonito-0.9.0.tar.gz (from https://pypi.org/simple/ont-bonito/) (requires-python:>=3.9), version: 0.9.0 2025-11-14T15:07:02,626 Found link https://files.pythonhosted.org/packages/9a/2c/0bedb16ca27fe8006322000ed68634f9446aaacbfa9c557df85020f1e85b/ont_bonito-1.0.0.tar.gz (from https://pypi.org/simple/ont-bonito/) (requires-python:>=3.10), version: 1.0.0 2025-11-14T15:07:02,627 Fetching project page and analyzing links: https://www.piwheels.org/simple/ont-bonito/ 2025-11-14T15:07:02,627 Getting page https://www.piwheels.org/simple/ont-bonito/ 2025-11-14T15:07:02,629 Found index url https://www.piwheels.org/simple 2025-11-14T15:07:03,037 Fetched page https://www.piwheels.org/simple/ont-bonito/ as text/html 2025-11-14T15:07:03,047 Skipping link: No binaries permitted for ont-bonito: https://archive1.piwheels.org/simple/ont-bonito/ont_bonito-0.9.0-py3-none-any.whl#sha256=64ec00f0cb932f8fb9ea7c2a5e0fc26b147afd4a3357b37e95d7121344ab5928 (from https://www.piwheels.org/simple/ont-bonito/) (requires-python:>=3.9) 2025-11-14T15:07:03,048 Skipping link: No binaries permitted for ont-bonito: https://archive1.piwheels.org/simple/ont-bonito/ont_bonito-0.8.1-py3-none-any.whl#sha256=1245426c8d34ab785aefcbc2d5ae12f955a8129454fb86315ba5d2189152d955 (from https://www.piwheels.org/simple/ont-bonito/) (requires-python:>=3.8) 2025-11-14T15:07:03,048 Skipping link: No binaries permitted for ont-bonito: https://archive1.piwheels.org/simple/ont-bonito/ont_bonito-0.7.3-py3-none-any.whl#sha256=2a040524fb3f100169ba217feb08e6383466ac11255d28af8456eb81ce3b6bec (from https://www.piwheels.org/simple/ont-bonito/) 2025-11-14T15:07:03,049 Skipping 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https://archive1.piwheels.org/simple/ont-bonito/ont_bonito-0.6.2-py3-none-any.whl#sha256=a281400dcff05d8c5325aa28e48ee82ac635f71f18ad07a1d8f2239e53053caf (from https://www.piwheels.org/simple/ont-bonito/) 2025-11-14T15:07:03,051 Skipping link: No binaries permitted for ont-bonito: https://archive1.piwheels.org/simple/ont-bonito/ont_bonito-0.6.1-py3-none-any.whl#sha256=02483a01ad272731467c6a1ec2e598db55fff4d3b220e55531d65b4dbbc45c8c (from https://www.piwheels.org/simple/ont-bonito/) 2025-11-14T15:07:03,052 Skipping link: No binaries permitted for ont-bonito: https://archive1.piwheels.org/simple/ont-bonito/ont_bonito-0.6.0-py3-none-any.whl#sha256=53bed781c090241b0646b35d38ccfc1fc8b01a00c7e164c8d0efaa20aedf1a68 (from https://www.piwheels.org/simple/ont-bonito/) 2025-11-14T15:07:03,052 Skipping link: No binaries permitted for ont-bonito: https://archive1.piwheels.org/simple/ont-bonito/ont_bonito-0.6.0a0-py3-none-any.whl#sha256=967f4e93c409e78e0804ae584c2cdee2b8a5a2a4a19c719cbb56c22fdefb96a1 (from https://www.piwheels.org/simple/ont-bonito/) 2025-11-14T15:07:03,053 Skipping link: No binaries permitted for ont-bonito: https://archive1.piwheels.org/simple/ont-bonito/ont_bonito-0.5.1-py3-none-any.whl#sha256=adadb15fb95437b8aa445ad488ed159f8234ded4346696175449c532384b539f (from https://www.piwheels.org/simple/ont-bonito/) 2025-11-14T15:07:03,054 Skipping link: No binaries permitted for ont-bonito: https://archive1.piwheels.org/simple/ont-bonito/ont_bonito-0.5.1a0-py3-none-any.whl#sha256=a52542c89d1a7a0fc321906b26a4dd42565047099063019ed690a8450c42e54a (from https://www.piwheels.org/simple/ont-bonito/) 2025-11-14T15:07:03,054 Skipping link: No binaries permitted for ont-bonito: 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https://archive1.piwheels.org/simple/ont-bonito/ont_bonito-0.2.3-py3-none-any.whl#sha256=9d1f667cbe5f8cb1376ee7ca89763d691b11d20fb11348a84e25ca31e2fa9dd3 (from https://www.piwheels.org/simple/ont-bonito/) 2025-11-14T15:07:03,056 Skipping link: No binaries permitted for ont-bonito: https://archive1.piwheels.org/simple/ont-bonito/ont_bonito-0.2.3a0-py3-none-any.whl#sha256=3f6cfda8101ae11440f5416df9056a109d43edf85bb04d21acf4b516c931f0d8 (from https://www.piwheels.org/simple/ont-bonito/) 2025-11-14T15:07:03,057 Skipping link: No binaries permitted for ont-bonito: https://archive1.piwheels.org/simple/ont-bonito/ont_bonito-0.2.2-py3-none-any.whl#sha256=3da544c8dbe1554efc330e34bfc4916660581d2dad83b32cecf963c08dbf6067 (from https://www.piwheels.org/simple/ont-bonito/) 2025-11-14T15:07:03,057 Skipping link: No binaries permitted for ont-bonito: https://archive1.piwheels.org/simple/ont-bonito/ont_bonito-0.2.2a0-py3-none-any.whl#sha256=de54eff144081067f01c83de23981303e9d04c00f2ac9ef5e156fc03021ac909 (from https://www.piwheels.org/simple/ont-bonito/) 2025-11-14T15:07:03,058 Skipping link: No binaries permitted for ont-bonito: https://archive1.piwheels.org/simple/ont-bonito/ont_bonito-0.2.1-py3-none-any.whl#sha256=028f0680f5fdc98b537e1b0fcc5ca0f21631a3d5a532ef7e531ee6c905267754 (from https://www.piwheels.org/simple/ont-bonito/) 2025-11-14T15:07:03,058 Skipping link: No binaries permitted for ont-bonito: https://archive1.piwheels.org/simple/ont-bonito/ont_bonito-0.2.1a0-py3-none-any.whl#sha256=2e354a310e5c511630b851b43d2d7a99ab723911f111ec643ec327798f1af45d (from https://www.piwheels.org/simple/ont-bonito/) 2025-11-14T15:07:03,059 Skipping link: No binaries permitted for ont-bonito: https://archive1.piwheels.org/simple/ont-bonito/ont_bonito-0.2.0-py3-none-any.whl#sha256=af94713a499bd2aa542914d7de4c2e6a3bf5ba4b6c69467962e92e43b17c7bbb (from https://www.piwheels.org/simple/ont-bonito/) 2025-11-14T15:07:03,059 Skipping link: No binaries permitted for ont-bonito: https://archive1.piwheels.org/simple/ont-bonito/ont_bonito-0.2.0a1-py3-none-any.whl#sha256=d85713e49bbe28aba61e6ece58049327e2ed591ab836a3dee332f7492440f60c (from https://www.piwheels.org/simple/ont-bonito/) 2025-11-14T15:07:03,060 Skipping link: No binaries permitted for ont-bonito: https://archive1.piwheels.org/simple/ont-bonito/ont_bonito-0.1.5-py3-none-any.whl#sha256=8f8b6261f20a0fd4acd119cb9292de2a1592aca4205d52e5bf2b869888d1c34b (from https://www.piwheels.org/simple/ont-bonito/) 2025-11-14T15:07:03,061 Skipping link: No binaries permitted for ont-bonito: https://archive1.piwheels.org/simple/ont-bonito/ont_bonito-0.1.4-py3-none-any.whl#sha256=95ecf6751cac2e62cafedee8c7fd36395aa3d06683b465f05f38fc63217c76ec (from https://www.piwheels.org/simple/ont-bonito/) 2025-11-14T15:07:03,061 Skipping link: No binaries permitted for ont-bonito: https://archive1.piwheels.org/simple/ont-bonito/ont_bonito-0.1.3-py3-none-any.whl#sha256=aa5a1ad050f416a356a275ff7c1edf434f2536ecaedf39868c17e6e03612f80c (from https://www.piwheels.org/simple/ont-bonito/) 2025-11-14T15:07:03,062 Skipping link: No binaries permitted for ont-bonito: https://archive1.piwheels.org/simple/ont-bonito/ont_bonito-0.1.2-py3-none-any.whl#sha256=c19ce7dd24737098ed21721c2119fcf05495d6c6f1f28ce34bbe4e5381a1cb6d (from https://www.piwheels.org/simple/ont-bonito/) 2025-11-14T15:07:03,062 Skipping link: No binaries permitted for ont-bonito: https://archive1.piwheels.org/simple/ont-bonito/ont_bonito-0.1.0-py3-none-any.whl#sha256=d8530f0cab49e0a617c041c69b5ff3072e12bdf71c5791223aa6840bb03c563a (from https://www.piwheels.org/simple/ont-bonito/) 2025-11-14T15:07:03,062 Skipping link: No binaries permitted for ont-bonito: https://archive1.piwheels.org/simple/ont-bonito/ont_bonito-0.0.8-py3-none-any.whl#sha256=e9789f86f9f4fdcf93e943b22612c247b9799881bab9917132d5b31213115818 (from https://www.piwheels.org/simple/ont-bonito/) 2025-11-14T15:07:03,063 Skipping link: No binaries permitted for ont-bonito: https://archive1.piwheels.org/simple/ont-bonito/ont_bonito-0.0.7-py3-none-any.whl#sha256=d67d2643174f008c4147a21f3d48f5ea6e0c8f6d24cf04f8e56c9d41c7ad3a11 (from https://www.piwheels.org/simple/ont-bonito/) 2025-11-14T15:07:03,063 Skipping link: No binaries permitted for ont-bonito: https://archive1.piwheels.org/simple/ont-bonito/ont_bonito-0.0.5-py3-none-any.whl#sha256=dba97dc16615c6084af661cdd650c990dc6f5e801b977d586b3984fbf9cd9cc0 (from https://www.piwheels.org/simple/ont-bonito/) 2025-11-14T15:07:03,064 Skipping link: No binaries permitted for ont-bonito: https://archive1.piwheels.org/simple/ont-bonito/ont_bonito-0.0.4-py3-none-any.whl#sha256=f4296580ddbea57bc95225cf1970b24bd6399bbe45db8e332e7b2526154213d2 (from https://www.piwheels.org/simple/ont-bonito/) 2025-11-14T15:07:03,065 Skipping link: No binaries permitted for ont-bonito: https://archive1.piwheels.org/simple/ont-bonito/ont_bonito-0.0.3-py3-none-any.whl#sha256=7627466cf3e20b953515974d554131dfc7328da352874e47149686dfb162947a (from https://www.piwheels.org/simple/ont-bonito/) 2025-11-14T15:07:03,065 Skipping link: No binaries permitted for ont-bonito: https://archive1.piwheels.org/simple/ont-bonito/ont_bonito-0.0.1-py3-none-any.whl#sha256=921810adb533b8964600c2600af50dba5338d8585fc4dfdaa32b482a3585bd20 (from https://www.piwheels.org/simple/ont-bonito/) 2025-11-14T15:07:03,066 Skipping link: not a file: https://www.piwheels.org/simple/ont-bonito/ 2025-11-14T15:07:03,066 Skipping link: not a file: https://pypi.org/simple/ont-bonito/ 2025-11-14T15:07:03,091 Given no hashes to check 1 links for project 'ont-bonito': discarding no candidates 2025-11-14T15:07:03,109 Collecting ont-bonito==1.0.0 2025-11-14T15:07:03,111 Created temporary directory: /tmp/pip-unpack-y3xr8jq9 2025-11-14T15:07:03,244 Downloading ont_bonito-1.0.0.tar.gz (53 kB) 2025-11-14T15:07:03,394 Added ont-bonito==1.0.0 from https://files.pythonhosted.org/packages/9a/2c/0bedb16ca27fe8006322000ed68634f9446aaacbfa9c557df85020f1e85b/ont_bonito-1.0.0.tar.gz to build tracker '/tmp/pip-build-tracker-zxwbf_b5' 2025-11-14T15:07:03,398 Created temporary directory: /tmp/pip-build-env-2p_v6ghh 2025-11-14T15:07:03,403 Installing build dependencies: started 2025-11-14T15:07:03,404 Running command pip subprocess to install build dependencies 2025-11-14T15:07:04,556 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2025-11-14T15:07:05,151 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2025-11-14T15:07:05,174 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-11-14T15:07:06,874 Collecting setuptools>=68.0 2025-11-14T15:07:06,975 Using cached https://www.piwheels.org/simple/setuptools/setuptools-80.9.0-py3-none-any.whl (1.2 MB) 2025-11-14T15:07:09,886 Installing collected packages: setuptools 2025-11-14T15:07:13,534 Successfully installed setuptools-80.9.0 2025-11-14T15:07:13,803 Installing build dependencies: finished with status 'done' 2025-11-14T15:07:13,810 Getting requirements to build wheel: started 2025-11-14T15:07:13,811 Running command Getting requirements to build wheel 2025-11-14T15:07:14,507 running egg_info 2025-11-14T15:07:14,514 writing ont_bonito.egg-info/PKG-INFO 2025-11-14T15:07:14,519 writing dependency_links to ont_bonito.egg-info/dependency_links.txt 2025-11-14T15:07:14,520 writing entry points to ont_bonito.egg-info/entry_points.txt 2025-11-14T15:07:14,523 writing requirements to ont_bonito.egg-info/requires.txt 2025-11-14T15:07:14,525 writing top-level names to ont_bonito.egg-info/top_level.txt 2025-11-14T15:07:14,552 reading manifest file 'ont_bonito.egg-info/SOURCES.txt' 2025-11-14T15:07:14,557 reading manifest template 'MANIFEST.in' 2025-11-14T15:07:14,561 adding license file 'LICENCE.txt' 2025-11-14T15:07:14,566 writing manifest file 'ont_bonito.egg-info/SOURCES.txt' 2025-11-14T15:07:14,666 Getting requirements to build wheel: finished with status 'done' 2025-11-14T15:07:14,669 Created temporary directory: /tmp/pip-modern-metadata-tpk1kyst 2025-11-14T15:07:14,672 Preparing metadata (pyproject.toml): started 2025-11-14T15:07:14,673 Running command Preparing metadata (pyproject.toml) 2025-11-14T15:07:15,325 running dist_info 2025-11-14T15:07:15,337 creating /tmp/pip-modern-metadata-tpk1kyst/ont_bonito.egg-info 2025-11-14T15:07:15,338 writing /tmp/pip-modern-metadata-tpk1kyst/ont_bonito.egg-info/PKG-INFO 2025-11-14T15:07:15,343 writing dependency_links to /tmp/pip-modern-metadata-tpk1kyst/ont_bonito.egg-info/dependency_links.txt 2025-11-14T15:07:15,344 writing entry points to /tmp/pip-modern-metadata-tpk1kyst/ont_bonito.egg-info/entry_points.txt 2025-11-14T15:07:15,347 writing requirements to /tmp/pip-modern-metadata-tpk1kyst/ont_bonito.egg-info/requires.txt 2025-11-14T15:07:15,348 writing top-level names to /tmp/pip-modern-metadata-tpk1kyst/ont_bonito.egg-info/top_level.txt 2025-11-14T15:07:15,350 writing manifest file '/tmp/pip-modern-metadata-tpk1kyst/ont_bonito.egg-info/SOURCES.txt' 2025-11-14T15:07:15,374 reading manifest file '/tmp/pip-modern-metadata-tpk1kyst/ont_bonito.egg-info/SOURCES.txt' 2025-11-14T15:07:15,376 reading manifest template 'MANIFEST.in' 2025-11-14T15:07:15,379 adding license file 'LICENCE.txt' 2025-11-14T15:07:15,383 writing manifest file '/tmp/pip-modern-metadata-tpk1kyst/ont_bonito.egg-info/SOURCES.txt' 2025-11-14T15:07:15,384 creating '/tmp/pip-modern-metadata-tpk1kyst/ont_bonito-1.0.0.dist-info' 2025-11-14T15:07:15,510 Preparing metadata (pyproject.toml): finished with status 'done' 2025-11-14T15:07:15,514 Source in /tmp/pip-wheel-piffk90_/ont-bonito_69e9768723ae44a5bea30af2658dd4ab has version 1.0.0, which satisfies requirement ont-bonito==1.0.0 from https://files.pythonhosted.org/packages/9a/2c/0bedb16ca27fe8006322000ed68634f9446aaacbfa9c557df85020f1e85b/ont_bonito-1.0.0.tar.gz 2025-11-14T15:07:15,515 Removed ont-bonito==1.0.0 from https://files.pythonhosted.org/packages/9a/2c/0bedb16ca27fe8006322000ed68634f9446aaacbfa9c557df85020f1e85b/ont_bonito-1.0.0.tar.gz from build tracker '/tmp/pip-build-tracker-zxwbf_b5' 2025-11-14T15:07:15,521 Created temporary directory: /tmp/pip-unpack-6v1o4l11 2025-11-14T15:07:15,522 Building wheels for collected packages: ont-bonito 2025-11-14T15:07:15,526 Created temporary directory: /tmp/pip-wheel-qdrpc2_5 2025-11-14T15:07:15,526 Destination directory: /tmp/pip-wheel-qdrpc2_5 2025-11-14T15:07:15,529 Building wheel for ont-bonito (pyproject.toml): started 2025-11-14T15:07:15,530 Running command Building wheel for ont-bonito (pyproject.toml) 2025-11-14T15:07:16,151 running bdist_wheel 2025-11-14T15:07:16,172 running build 2025-11-14T15:07:16,173 running build_py 2025-11-14T15:07:16,179 creating build/lib/test 2025-11-14T15:07:16,181 copying test/__init__.py -> build/lib/test 2025-11-14T15:07:16,183 copying test/test_download.py -> build/lib/test 2025-11-14T15:07:16,185 copying test/test_cli.py -> build/lib/test 2025-11-14T15:07:16,187 creating build/lib/bonito 2025-11-14T15:07:16,188 copying bonito/schedule.py -> build/lib/bonito 2025-11-14T15:07:16,190 copying bonito/__init__.py -> build/lib/bonito 2025-11-14T15:07:16,192 copying bonito/training.py -> build/lib/bonito 2025-11-14T15:07:16,194 copying bonito/data.py -> build/lib/bonito 2025-11-14T15:07:16,196 copying bonito/pod5.py -> build/lib/bonito 2025-11-14T15:07:16,198 copying bonito/__main__.py -> build/lib/bonito 2025-11-14T15:07:16,200 copying bonito/util.py -> build/lib/bonito 2025-11-14T15:07:16,203 copying bonito/io.py -> build/lib/bonito 2025-11-14T15:07:16,205 copying bonito/aligner.py -> build/lib/bonito 2025-11-14T15:07:16,207 copying bonito/nn.py -> build/lib/bonito 2025-11-14T15:07:16,210 copying bonito/reader.py -> build/lib/bonito 2025-11-14T15:07:16,212 copying bonito/multiprocessing.py -> build/lib/bonito 2025-11-14T15:07:16,215 creating build/lib/bonito/transformer 2025-11-14T15:07:16,216 copying bonito/transformer/__init__.py -> build/lib/bonito/transformer 2025-11-14T15:07:16,218 copying bonito/transformer/model.py -> build/lib/bonito/transformer 2025-11-14T15:07:16,220 copying bonito/transformer/basecall.py -> build/lib/bonito/transformer 2025-11-14T15:07:16,223 creating build/lib/bonito/ctc 2025-11-14T15:07:16,225 copying bonito/ctc/__init__.py -> build/lib/bonito/ctc 2025-11-14T15:07:16,227 copying bonito/ctc/model.py -> build/lib/bonito/ctc 2025-11-14T15:07:16,229 copying bonito/ctc/basecall.py -> build/lib/bonito/ctc 2025-11-14T15:07:16,231 creating build/lib/bonito/crf 2025-11-14T15:07:16,232 copying bonito/crf/__init__.py -> build/lib/bonito/crf 2025-11-14T15:07:16,234 copying bonito/crf/model.py -> build/lib/bonito/crf 2025-11-14T15:07:16,237 copying bonito/crf/basecall.py -> build/lib/bonito/crf 2025-11-14T15:07:16,240 creating build/lib/bonito/cli 2025-11-14T15:07:16,241 copying bonito/cli/__init__.py -> build/lib/bonito/cli 2025-11-14T15:07:16,243 copying bonito/cli/train.py -> build/lib/bonito/cli 2025-11-14T15:07:16,245 copying bonito/cli/basecaller.py -> build/lib/bonito/cli 2025-11-14T15:07:16,248 copying bonito/cli/evaluate.py -> build/lib/bonito/cli 2025-11-14T15:07:16,250 copying bonito/cli/duplex.py -> build/lib/bonito/cli 2025-11-14T15:07:16,253 copying bonito/cli/view.py -> build/lib/bonito/cli 2025-11-14T15:07:16,254 copying bonito/cli/download.py -> build/lib/bonito/cli 2025-11-14T15:07:16,257 copying bonito/cli/export.py -> build/lib/bonito/cli 2025-11-14T15:07:16,259 running egg_info 2025-11-14T15:07:16,270 writing ont_bonito.egg-info/PKG-INFO 2025-11-14T15:07:16,274 writing dependency_links to ont_bonito.egg-info/dependency_links.txt 2025-11-14T15:07:16,276 writing entry points to ont_bonito.egg-info/entry_points.txt 2025-11-14T15:07:16,278 writing requirements to ont_bonito.egg-info/requires.txt 2025-11-14T15:07:16,279 writing top-level names to ont_bonito.egg-info/top_level.txt 2025-11-14T15:07:16,293 reading manifest file 'ont_bonito.egg-info/SOURCES.txt' 2025-11-14T15:07:16,297 reading manifest template 'MANIFEST.in' 2025-11-14T15:07:16,300 adding license file 'LICENCE.txt' 2025-11-14T15:07:16,304 writing manifest file 'ont_bonito.egg-info/SOURCES.txt' 2025-11-14T15:07:16,306 /tmp/pip-build-env-2p_v6ghh/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'bonito.data' is absent from the `packages` configuration. 2025-11-14T15:07:16,307 !! 2025-11-14T15:07:16,308 ******************************************************************************** 2025-11-14T15:07:16,308 ############################ 2025-11-14T15:07:16,309 # Package would be ignored # 2025-11-14T15:07:16,309 ############################ 2025-11-14T15:07:16,310 Python recognizes 'bonito.data' as an importable package[^1], 2025-11-14T15:07:16,310 but it is absent from setuptools' `packages` configuration. 2025-11-14T15:07:16,311 This leads to an ambiguous overall configuration. If you want to distribute this 2025-11-14T15:07:16,311 package, please make sure that 'bonito.data' is explicitly added 2025-11-14T15:07:16,312 to the `packages` configuration field. 2025-11-14T15:07:16,313 Alternatively, you can also rely on setuptools' discovery methods 2025-11-14T15:07:16,313 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-11-14T15:07:16,314 instead of `find_packages(...)`/`find:`). 2025-11-14T15:07:16,315 You can read more about "package discovery" on setuptools documentation page: 2025-11-14T15:07:16,316 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-11-14T15:07:16,317 If you don't want 'bonito.data' to be distributed and are 2025-11-14T15:07:16,317 already explicitly excluding 'bonito.data' via 2025-11-14T15:07:16,318 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-11-14T15:07:16,318 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-11-14T15:07:16,319 combination with a more fine grained `package-data` configuration. 2025-11-14T15:07:16,320 You can read more about "package data files" on setuptools documentation page: 2025-11-14T15:07:16,321 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-11-14T15:07:16,322 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-11-14T15:07:16,323 even if it does not contain any `.py` files. 2025-11-14T15:07:16,323 On the other hand, currently there is no concept of package data 2025-11-14T15:07:16,324 directory, all directories are treated like packages. 2025-11-14T15:07:16,324 ******************************************************************************** 2025-11-14T15:07:16,325 !! 2025-11-14T15:07:16,326 check.warn(importable) 2025-11-14T15:07:16,326 /tmp/pip-build-env-2p_v6ghh/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'bonito.models' is absent from the `packages` configuration. 2025-11-14T15:07:16,327 !! 2025-11-14T15:07:16,328 ******************************************************************************** 2025-11-14T15:07:16,328 ############################ 2025-11-14T15:07:16,329 # Package would be ignored # 2025-11-14T15:07:16,329 ############################ 2025-11-14T15:07:16,330 Python recognizes 'bonito.models' as an importable package[^1], 2025-11-14T15:07:16,331 but it is absent from setuptools' `packages` configuration. 2025-11-14T15:07:16,332 This leads to an ambiguous overall configuration. If you want to distribute this 2025-11-14T15:07:16,332 package, please make sure that 'bonito.models' is explicitly added 2025-11-14T15:07:16,333 to the `packages` configuration field. 2025-11-14T15:07:16,334 Alternatively, you can also rely on setuptools' discovery methods 2025-11-14T15:07:16,335 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-11-14T15:07:16,335 instead of `find_packages(...)`/`find:`). 2025-11-14T15:07:16,336 You can read more about "package discovery" on setuptools documentation page: 2025-11-14T15:07:16,337 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-11-14T15:07:16,338 If you don't want 'bonito.models' to be distributed and are 2025-11-14T15:07:16,338 already explicitly excluding 'bonito.models' via 2025-11-14T15:07:16,339 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-11-14T15:07:16,339 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-11-14T15:07:16,340 combination with a more fine grained `package-data` configuration. 2025-11-14T15:07:16,340 You can read more about "package data files" on setuptools documentation page: 2025-11-14T15:07:16,341 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-11-14T15:07:16,343 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-11-14T15:07:16,343 even if it does not contain any `.py` files. 2025-11-14T15:07:16,344 On the other hand, currently there is no concept of package data 2025-11-14T15:07:16,344 directory, all directories are treated like packages. 2025-11-14T15:07:16,345 ******************************************************************************** 2025-11-14T15:07:16,346 !! 2025-11-14T15:07:16,347 check.warn(importable) 2025-11-14T15:07:16,347 /tmp/pip-build-env-2p_v6ghh/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'bonito.models.configs' is absent from the `packages` configuration. 2025-11-14T15:07:16,348 !! 2025-11-14T15:07:16,349 ******************************************************************************** 2025-11-14T15:07:16,349 ############################ 2025-11-14T15:07:16,350 # Package would be ignored # 2025-11-14T15:07:16,350 ############################ 2025-11-14T15:07:16,351 Python recognizes 'bonito.models.configs' as an importable package[^1], 2025-11-14T15:07:16,351 but it is absent from setuptools' `packages` configuration. 2025-11-14T15:07:16,352 This leads to an ambiguous overall configuration. If you want to distribute this 2025-11-14T15:07:16,353 package, please make sure that 'bonito.models.configs' is explicitly added 2025-11-14T15:07:16,354 to the `packages` configuration field. 2025-11-14T15:07:16,355 Alternatively, you can also rely on setuptools' discovery methods 2025-11-14T15:07:16,355 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-11-14T15:07:16,355 instead of `find_packages(...)`/`find:`). 2025-11-14T15:07:16,356 You can read more about "package discovery" on setuptools documentation page: 2025-11-14T15:07:16,357 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-11-14T15:07:16,358 If you don't want 'bonito.models.configs' to be distributed and are 2025-11-14T15:07:16,359 already explicitly excluding 'bonito.models.configs' via 2025-11-14T15:07:16,359 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-11-14T15:07:16,360 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-11-14T15:07:16,360 combination with a more fine grained `package-data` configuration. 2025-11-14T15:07:16,362 You can read more about "package data files" on setuptools documentation page: 2025-11-14T15:07:16,363 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-11-14T15:07:16,364 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-11-14T15:07:16,365 even if it does not contain any `.py` files. 2025-11-14T15:07:16,365 On the other hand, currently there is no concept of package data 2025-11-14T15:07:16,366 directory, all directories are treated like packages. 2025-11-14T15:07:16,366 ******************************************************************************** 2025-11-14T15:07:16,367 !! 2025-11-14T15:07:16,367 check.warn(importable) 2025-11-14T15:07:16,368 creating build/lib/bonito/data 2025-11-14T15:07:16,368 copying bonito/data/README.md -> build/lib/bonito/data 2025-11-14T15:07:16,368 creating build/lib/bonito/models 2025-11-14T15:07:16,369 copying bonito/models/README.md -> build/lib/bonito/models 2025-11-14T15:07:16,369 creating build/lib/bonito/models/configs 2025-11-14T15:07:16,369 copying bonito/models/configs/dna_r9.4.1@v1.toml -> build/lib/bonito/models/configs 2025-11-14T15:07:16,370 copying bonito/models/configs/dna_r9.4.1@v2.toml -> build/lib/bonito/models/configs 2025-11-14T15:07:16,370 copying bonito/models/configs/dna_r9.4.1@v3.toml -> build/lib/bonito/models/configs 2025-11-14T15:07:16,371 installing to build/bdist.linux-armv7l/wheel 2025-11-14T15:07:16,371 running install 2025-11-14T15:07:16,373 running install_lib 2025-11-14T15:07:16,380 creating build/bdist.linux-armv7l/wheel 2025-11-14T15:07:16,382 creating build/bdist.linux-armv7l/wheel/test 2025-11-14T15:07:16,383 copying build/lib/test/__init__.py -> build/bdist.linux-armv7l/wheel/./test 2025-11-14T15:07:16,384 copying build/lib/test/test_download.py -> build/bdist.linux-armv7l/wheel/./test 2025-11-14T15:07:16,386 copying build/lib/test/test_cli.py -> build/bdist.linux-armv7l/wheel/./test 2025-11-14T15:07:16,389 creating build/bdist.linux-armv7l/wheel/bonito 2025-11-14T15:07:16,390 creating build/bdist.linux-armv7l/wheel/bonito/transformer 2025-11-14T15:07:16,391 copying build/lib/bonito/transformer/__init__.py -> build/bdist.linux-armv7l/wheel/./bonito/transformer 2025-11-14T15:07:16,393 copying build/lib/bonito/transformer/model.py -> build/bdist.linux-armv7l/wheel/./bonito/transformer 2025-11-14T15:07:16,395 copying build/lib/bonito/transformer/basecall.py -> build/bdist.linux-armv7l/wheel/./bonito/transformer 2025-11-14T15:07:16,397 copying build/lib/bonito/schedule.py -> build/bdist.linux-armv7l/wheel/./bonito 2025-11-14T15:07:16,399 creating build/bdist.linux-armv7l/wheel/bonito/ctc 2025-11-14T15:07:16,400 copying build/lib/bonito/ctc/__init__.py -> build/bdist.linux-armv7l/wheel/./bonito/ctc 2025-11-14T15:07:16,402 copying build/lib/bonito/ctc/model.py -> build/bdist.linux-armv7l/wheel/./bonito/ctc 2025-11-14T15:07:16,404 copying build/lib/bonito/ctc/basecall.py -> build/bdist.linux-armv7l/wheel/./bonito/ctc 2025-11-14T15:07:16,406 copying build/lib/bonito/__init__.py -> build/bdist.linux-armv7l/wheel/./bonito 2025-11-14T15:07:16,408 copying build/lib/bonito/training.py -> build/bdist.linux-armv7l/wheel/./bonito 2025-11-14T15:07:16,411 creating build/bdist.linux-armv7l/wheel/bonito/crf 2025-11-14T15:07:16,412 copying build/lib/bonito/crf/__init__.py -> build/bdist.linux-armv7l/wheel/./bonito/crf 2025-11-14T15:07:16,413 copying build/lib/bonito/crf/model.py -> build/bdist.linux-armv7l/wheel/./bonito/crf 2025-11-14T15:07:16,416 copying build/lib/bonito/crf/basecall.py -> build/bdist.linux-armv7l/wheel/./bonito/crf 2025-11-14T15:07:16,418 copying build/lib/bonito/data.py -> build/bdist.linux-armv7l/wheel/./bonito 2025-11-14T15:07:16,421 creating build/bdist.linux-armv7l/wheel/bonito/data 2025-11-14T15:07:16,422 copying build/lib/bonito/data/README.md -> build/bdist.linux-armv7l/wheel/./bonito/data 2025-11-14T15:07:16,424 copying build/lib/bonito/pod5.py -> build/bdist.linux-armv7l/wheel/./bonito 2025-11-14T15:07:16,426 creating build/bdist.linux-armv7l/wheel/bonito/cli 2025-11-14T15:07:16,427 copying build/lib/bonito/cli/__init__.py -> build/bdist.linux-armv7l/wheel/./bonito/cli 2025-11-14T15:07:16,429 copying build/lib/bonito/cli/train.py -> build/bdist.linux-armv7l/wheel/./bonito/cli 2025-11-14T15:07:16,431 copying build/lib/bonito/cli/basecaller.py -> build/bdist.linux-armv7l/wheel/./bonito/cli 2025-11-14T15:07:16,433 copying build/lib/bonito/cli/evaluate.py -> build/bdist.linux-armv7l/wheel/./bonito/cli 2025-11-14T15:07:16,435 copying build/lib/bonito/cli/duplex.py -> build/bdist.linux-armv7l/wheel/./bonito/cli 2025-11-14T15:07:16,438 copying build/lib/bonito/cli/view.py -> build/bdist.linux-armv7l/wheel/./bonito/cli 2025-11-14T15:07:16,439 copying build/lib/bonito/cli/download.py -> build/bdist.linux-armv7l/wheel/./bonito/cli 2025-11-14T15:07:16,442 copying build/lib/bonito/cli/export.py -> build/bdist.linux-armv7l/wheel/./bonito/cli 2025-11-14T15:07:16,444 copying build/lib/bonito/__main__.py -> build/bdist.linux-armv7l/wheel/./bonito 2025-11-14T15:07:16,445 copying build/lib/bonito/util.py -> build/bdist.linux-armv7l/wheel/./bonito 2025-11-14T15:07:16,448 copying build/lib/bonito/io.py -> build/bdist.linux-armv7l/wheel/./bonito 2025-11-14T15:07:16,451 copying build/lib/bonito/aligner.py -> build/bdist.linux-armv7l/wheel/./bonito 2025-11-14T15:07:16,453 copying build/lib/bonito/nn.py -> build/bdist.linux-armv7l/wheel/./bonito 2025-11-14T15:07:16,456 creating build/bdist.linux-armv7l/wheel/bonito/models 2025-11-14T15:07:16,457 copying build/lib/bonito/models/README.md -> build/bdist.linux-armv7l/wheel/./bonito/models 2025-11-14T15:07:16,459 creating build/bdist.linux-armv7l/wheel/bonito/models/configs 2025-11-14T15:07:16,461 copying build/lib/bonito/models/configs/dna_r9.4.1@v2.toml -> build/bdist.linux-armv7l/wheel/./bonito/models/configs 2025-11-14T15:07:16,463 copying build/lib/bonito/models/configs/dna_r9.4.1@v1.toml -> build/bdist.linux-armv7l/wheel/./bonito/models/configs 2025-11-14T15:07:16,465 copying build/lib/bonito/models/configs/dna_r9.4.1@v3.toml -> build/bdist.linux-armv7l/wheel/./bonito/models/configs 2025-11-14T15:07:16,467 copying build/lib/bonito/reader.py -> build/bdist.linux-armv7l/wheel/./bonito 2025-11-14T15:07:16,470 copying build/lib/bonito/multiprocessing.py -> build/bdist.linux-armv7l/wheel/./bonito 2025-11-14T15:07:16,472 running install_egg_info 2025-11-14T15:07:16,478 Copying ont_bonito.egg-info to build/bdist.linux-armv7l/wheel/./ont_bonito-1.0.0-py3.11.egg-info 2025-11-14T15:07:16,489 running install_scripts 2025-11-14T15:07:16,501 creating build/bdist.linux-armv7l/wheel/ont_bonito-1.0.0.dist-info/WHEEL 2025-11-14T15:07:16,505 creating '/tmp/pip-wheel-qdrpc2_5/.tmp-dzrpzwip/ont_bonito-1.0.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-11-14T15:07:16,507 adding 'bonito/__init__.py' 2025-11-14T15:07:16,509 adding 'bonito/__main__.py' 2025-11-14T15:07:16,511 adding 'bonito/aligner.py' 2025-11-14T15:07:16,513 adding 'bonito/data.py' 2025-11-14T15:07:16,516 adding 'bonito/io.py' 2025-11-14T15:07:16,518 adding 'bonito/multiprocessing.py' 2025-11-14T15:07:16,521 adding 'bonito/nn.py' 2025-11-14T15:07:16,523 adding 'bonito/pod5.py' 2025-11-14T15:07:16,525 adding 'bonito/reader.py' 2025-11-14T15:07:16,527 adding 'bonito/schedule.py' 2025-11-14T15:07:16,529 adding 'bonito/training.py' 2025-11-14T15:07:16,531 adding 'bonito/util.py' 2025-11-14T15:07:16,534 adding 'bonito/cli/__init__.py' 2025-11-14T15:07:16,536 adding 'bonito/cli/basecaller.py' 2025-11-14T15:07:16,538 adding 'bonito/cli/download.py' 2025-11-14T15:07:16,540 adding 'bonito/cli/duplex.py' 2025-11-14T15:07:16,542 adding 'bonito/cli/evaluate.py' 2025-11-14T15:07:16,544 adding 'bonito/cli/export.py' 2025-11-14T15:07:16,546 adding 'bonito/cli/train.py' 2025-11-14T15:07:16,548 adding 'bonito/cli/view.py' 2025-11-14T15:07:16,550 adding 'bonito/crf/__init__.py' 2025-11-14T15:07:16,552 adding 'bonito/crf/basecall.py' 2025-11-14T15:07:16,554 adding 'bonito/crf/model.py' 2025-11-14T15:07:16,556 adding 'bonito/ctc/__init__.py' 2025-11-14T15:07:16,558 adding 'bonito/ctc/basecall.py' 2025-11-14T15:07:16,560 adding 'bonito/ctc/model.py' 2025-11-14T15:07:16,562 adding 'bonito/data/README.md' 2025-11-14T15:07:16,564 adding 'bonito/models/README.md' 2025-11-14T15:07:16,565 adding 'bonito/models/configs/dna_r9.4.1@v1.toml' 2025-11-14T15:07:16,567 adding 'bonito/models/configs/dna_r9.4.1@v2.toml' 2025-11-14T15:07:16,568 adding 'bonito/models/configs/dna_r9.4.1@v3.toml' 2025-11-14T15:07:16,569 adding 'bonito/transformer/__init__.py' 2025-11-14T15:07:16,570 adding 'bonito/transformer/basecall.py' 2025-11-14T15:07:16,571 adding 'bonito/transformer/model.py' 2025-11-14T15:07:16,575 adding 'ont_bonito-1.0.0.dist-info/licenses/LICENCE.txt' 2025-11-14T15:07:16,577 adding 'test/__init__.py' 2025-11-14T15:07:16,578 adding 'test/test_cli.py' 2025-11-14T15:07:16,579 adding 'test/test_download.py' 2025-11-14T15:07:16,581 adding 'ont_bonito-1.0.0.dist-info/METADATA' 2025-11-14T15:07:16,582 adding 'ont_bonito-1.0.0.dist-info/WHEEL' 2025-11-14T15:07:16,582 adding 'ont_bonito-1.0.0.dist-info/entry_points.txt' 2025-11-14T15:07:16,583 adding 'ont_bonito-1.0.0.dist-info/top_level.txt' 2025-11-14T15:07:16,584 adding 'ont_bonito-1.0.0.dist-info/RECORD' 2025-11-14T15:07:16,586 removing build/bdist.linux-armv7l/wheel 2025-11-14T15:07:16,697 Building wheel for ont-bonito (pyproject.toml): finished with status 'done' 2025-11-14T15:07:16,703 Created wheel for ont-bonito: filename=ont_bonito-1.0.0-py3-none-any.whl size=61802 sha256=a35c55e4ae67e8cdec24c44de2db7696a880adb756c67038f913e36ebdc51507 2025-11-14T15:07:16,705 Stored in directory: /tmp/pip-ephem-wheel-cache-amov5v_0/wheels/1b/79/05/87e7fa42bf2cd46fca719b53560df589956cdc2c258d6a210a 2025-11-14T15:07:16,717 Successfully built ont-bonito 2025-11-14T15:07:16,773 Removed build tracker: '/tmp/pip-build-tracker-zxwbf_b5'