2025-11-18T23:46:43,121 Created temporary directory: /tmp/pip-ephem-wheel-cache-qjlzwtym 2025-11-18T23:46:43,122 Created temporary directory: /tmp/pip-build-tracker-23dqpxtx 2025-11-18T23:46:43,123 Initialized build tracking at /tmp/pip-build-tracker-23dqpxtx 2025-11-18T23:46:43,124 Created build tracker: /tmp/pip-build-tracker-23dqpxtx 2025-11-18T23:46:43,124 Entered build tracker: /tmp/pip-build-tracker-23dqpxtx 2025-11-18T23:46:43,125 Created temporary directory: /tmp/pip-wheel-nl9vx3rh 2025-11-18T23:46:43,128 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2025-11-18T23:46:43,130 Created temporary directory: /tmp/pip-ephem-wheel-cache-5kgygp0v 2025-11-18T23:46:43,152 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-11-18T23:46:43,155 2 location(s) to search for versions of bioio-czi: 2025-11-18T23:46:43,155 * https://pypi.org/simple/bioio-czi/ 2025-11-18T23:46:43,155 * https://www.piwheels.org/simple/bioio-czi/ 2025-11-18T23:46:43,156 Fetching project page and analyzing links: https://pypi.org/simple/bioio-czi/ 2025-11-18T23:46:43,157 Getting page https://pypi.org/simple/bioio-czi/ 2025-11-18T23:46:43,159 Found index url https://pypi.org/simple 2025-11-18T23:46:43,371 Fetched page https://pypi.org/simple/bioio-czi/ as application/vnd.pypi.simple.v1+json 2025-11-18T23:46:43,377 Found link https://files.pythonhosted.org/packages/7b/2d/fca87fac436bfc61379b6915fbf4e7d78f7b9711bee024aa6f11f9ba8afb/bioio-czi-0.9.0.tar.gz (from https://pypi.org/simple/bioio-czi/) (requires-python:>=3.9), version: 0.9.0 2025-11-18T23:46:43,377 Skipping link: No binaries permitted for bioio-czi: https://files.pythonhosted.org/packages/69/cb/42f7f12cc791cbc2b7de98a60a5e3d10cb83b3b558903fed2dbbbbdceebb/bioio_czi-0.9.0-py3-none-any.whl (from https://pypi.org/simple/bioio-czi/) (requires-python:>=3.9) 2025-11-18T23:46:43,378 Found link https://files.pythonhosted.org/packages/4f/cd/ce8b7b6c7f3eb444fc657c2998907826070689eafde56348566f8f193263/bioio-czi-1.0.0.tar.gz (from https://pypi.org/simple/bioio-czi/) (requires-python:>=3.9), version: 1.0.0 2025-11-18T23:46:43,379 Skipping link: No binaries permitted for bioio-czi: https://files.pythonhosted.org/packages/fd/36/445a9c2cff26933dd2867242f9efdf6ba796ae9808947bbeb9bb3152a9f0/bioio_czi-1.0.0-py3-none-any.whl (from https://pypi.org/simple/bioio-czi/) (requires-python:>=3.9) 2025-11-18T23:46:43,380 Skipping link: No binaries permitted for bioio-czi: https://files.pythonhosted.org/packages/b8/22/6751397899bd4564b16f4f2bc8541cc46791863a4ba9d07cc2c08d592777/bioio_czi-1.0.1-py3-none-any.whl (from https://pypi.org/simple/bioio-czi/) (requires-python:>=3.9) 2025-11-18T23:46:43,381 Found link https://files.pythonhosted.org/packages/a8/19/92df337f84368b9dfddf9a64898061d80b05d932eda4cdd5f170128ad494/bioio_czi-1.0.1.tar.gz (from https://pypi.org/simple/bioio-czi/) (requires-python:>=3.9), version: 1.0.1 2025-11-18T23:46:43,382 Skipping link: No binaries permitted for bioio-czi: https://files.pythonhosted.org/packages/c1/e7/ad239c17cf57c4a785a27bd89ddd0803a634e88cf8f485629c0a8b735951/bioio_czi-1.0.2-py3-none-any.whl (from https://pypi.org/simple/bioio-czi/) (requires-python:>=3.9) 2025-11-18T23:46:43,383 Found link https://files.pythonhosted.org/packages/78/f4/7014fe23c86f2983668f588a58a96b6522514a2a0ba9fd4771ead7adb23b/bioio_czi-1.0.2.tar.gz (from https://pypi.org/simple/bioio-czi/) (requires-python:>=3.9), version: 1.0.2 2025-11-18T23:46:43,383 Skipping link: No binaries permitted for bioio-czi: https://files.pythonhosted.org/packages/5b/a3/df17f518b7a641cb6dbb3b7fea288c906b51615eb477fc13c7b258fd340b/bioio_czi-1.0.3-py3-none-any.whl (from https://pypi.org/simple/bioio-czi/) (requires-python:>=3.9) 2025-11-18T23:46:43,384 Found link https://files.pythonhosted.org/packages/1d/e8/31d54cca82759ff4260542454f86e33409d8a4cba2c0525bf5ca700f80b5/bioio_czi-1.0.3.tar.gz (from https://pypi.org/simple/bioio-czi/) (requires-python:>=3.9), version: 1.0.3 2025-11-18T23:46:43,385 Skipping link: No binaries permitted for bioio-czi: https://files.pythonhosted.org/packages/33/f1/14545bf6b01fa9235683c373d031d37a3447f3f5bac8b461b444f51449e0/bioio_czi-2.0.0-py3-none-any.whl (from https://pypi.org/simple/bioio-czi/) (requires-python:>=3.9) 2025-11-18T23:46:43,386 Found link https://files.pythonhosted.org/packages/51/8d/6636929f3d1ab31e9905c61c4c65d80672c0793fe4592ab47846276f4111/bioio_czi-2.0.0.tar.gz (from https://pypi.org/simple/bioio-czi/) (requires-python:>=3.9), version: 2.0.0 2025-11-18T23:46:43,387 Skipping link: No binaries permitted for bioio-czi: https://files.pythonhosted.org/packages/19/4f/d684dc654d9eae96027eeffd3d07194d56686838ac914aca2388b205b1cd/bioio_czi-2.1.0-py3-none-any.whl (from https://pypi.org/simple/bioio-czi/) (requires-python:>=3.10) 2025-11-18T23:46:43,388 Found link https://files.pythonhosted.org/packages/90/24/265caff5d6b37442e4a07c75092be9b5b339b4f0d4c5aeb75d537a21337b/bioio_czi-2.1.0.tar.gz (from https://pypi.org/simple/bioio-czi/) (requires-python:>=3.10), version: 2.1.0 2025-11-18T23:46:43,388 Skipping link: No binaries permitted for bioio-czi: https://files.pythonhosted.org/packages/e6/82/00f01d56e7e5fc8916fd4977c784510372a2bda7b9dae7f966f52e717965/bioio_czi-2.2.0-py3-none-any.whl (from https://pypi.org/simple/bioio-czi/) (requires-python:>=3.10) 2025-11-18T23:46:43,389 Found link https://files.pythonhosted.org/packages/61/9f/9b60d3b738139995214a55efa416a6ec4a367bdf81bfcac6ea7465b08d2e/bioio_czi-2.2.0.tar.gz (from https://pypi.org/simple/bioio-czi/) (requires-python:>=3.10), version: 2.2.0 2025-11-18T23:46:43,390 Skipping link: No binaries permitted for bioio-czi: https://files.pythonhosted.org/packages/9f/38/52e5f5e44e1c38456639950f9e1fd91914a22b7b9502fded1be4753c0954/bioio_czi-2.3.0-py3-none-any.whl (from https://pypi.org/simple/bioio-czi/) (requires-python:>=3.10) 2025-11-18T23:46:43,390 Found link https://files.pythonhosted.org/packages/34/b2/3d5905a059b6b76cdc7922154c6e3b774716b42dbaca7a1b686165bbd501/bioio_czi-2.3.0.tar.gz (from https://pypi.org/simple/bioio-czi/) (requires-python:>=3.10), version: 2.3.0 2025-11-18T23:46:43,391 Skipping link: No binaries permitted for bioio-czi: https://files.pythonhosted.org/packages/95/2d/9465420b092b649461b130b9a4a6c6c652da7aad3bffd6c1342fcd72678e/bioio_czi-2.4.0-py3-none-any.whl (from https://pypi.org/simple/bioio-czi/) (requires-python:>=3.10) 2025-11-18T23:46:43,392 Found link https://files.pythonhosted.org/packages/a9/06/d6ce55ea1f8d8f98d9180ec5a47e452f578beaccc42da3e931641e8fff1f/bioio_czi-2.4.0.tar.gz (from https://pypi.org/simple/bioio-czi/) (requires-python:>=3.10), version: 2.4.0 2025-11-18T23:46:43,393 Skipping link: No binaries permitted for bioio-czi: https://files.pythonhosted.org/packages/52/72/4bb228ef271f682d0b800669a0757d9fe1540c7c78d5e54140648e597382/bioio_czi-2.4.1-py3-none-any.whl (from https://pypi.org/simple/bioio-czi/) (requires-python:>=3.10) 2025-11-18T23:46:43,394 Found link https://files.pythonhosted.org/packages/01/4d/4f7352c4b12f2f460b450aaa7507be852b8a2d4ef23c646b404e1167b143/bioio_czi-2.4.1.tar.gz (from https://pypi.org/simple/bioio-czi/) (requires-python:>=3.10), version: 2.4.1 2025-11-18T23:46:43,395 Fetching project page and analyzing links: https://www.piwheels.org/simple/bioio-czi/ 2025-11-18T23:46:43,395 Getting page https://www.piwheels.org/simple/bioio-czi/ 2025-11-18T23:46:43,397 Found index url https://www.piwheels.org/simple 2025-11-18T23:46:43,551 Fetched page https://www.piwheels.org/simple/bioio-czi/ as text/html 2025-11-18T23:46:43,555 Skipping link: No binaries permitted for bioio-czi: https://archive1.piwheels.org/simple/bioio-czi/bioio_czi-2.4.0-py3-none-any.whl#sha256=838c1c7e1bf987b9d6aafec4c8167fedc6547149343cfa0a18d0ef7a9799b8c5 (from https://www.piwheels.org/simple/bioio-czi/) (requires-python:>=3.10) 2025-11-18T23:46:43,556 Skipping link: No binaries permitted for bioio-czi: https://archive1.piwheels.org/simple/bioio-czi/bioio_czi-2.3.0-py3-none-any.whl#sha256=6c990ddf35b4046d65164da9c4dae371cf4621a420bcbb9fafd45ae96cb37c5e (from https://www.piwheels.org/simple/bioio-czi/) (requires-python:>=3.10) 2025-11-18T23:46:43,556 Skipping link: No binaries permitted for bioio-czi: https://archive1.piwheels.org/simple/bioio-czi/bioio_czi-2.2.0-py3-none-any.whl#sha256=e9650389a57dafd3e434c1222c01a8e74dcd42629c25b1c4573c5c9510187ead (from https://www.piwheels.org/simple/bioio-czi/) (requires-python:>=3.10) 2025-11-18T23:46:43,557 Skipping link: No binaries permitted for bioio-czi: https://archive1.piwheels.org/simple/bioio-czi/bioio_czi-2.1.0-py3-none-any.whl#sha256=a41e013cd83839975ecba24073abed0857df960fe2502ce5e1c441b4a01b9618 (from https://www.piwheels.org/simple/bioio-czi/) (requires-python:>=3.10) 2025-11-18T23:46:43,557 Skipping link: No binaries permitted for bioio-czi: https://archive1.piwheels.org/simple/bioio-czi/bioio_czi-2.0.0-py3-none-any.whl#sha256=bf10e809952df7f5aedc87811e2cec41fe39a752771fb210b7825a91076878c6 (from https://www.piwheels.org/simple/bioio-czi/) (requires-python:>=3.9) 2025-11-18T23:46:43,558 Skipping link: No binaries permitted for bioio-czi: https://archive1.piwheels.org/simple/bioio-czi/bioio_czi-1.0.3-py3-none-any.whl#sha256=e3cdd55c6b32f07acb2dd6dab0659322c432c1a4d3d0485c365f5a5bb6901abf (from https://www.piwheels.org/simple/bioio-czi/) (requires-python:>=3.9) 2025-11-18T23:46:43,558 Skipping link: No binaries permitted for bioio-czi: https://archive1.piwheels.org/simple/bioio-czi/bioio_czi-1.0.2-py3-none-any.whl#sha256=f97b86a892769cbf0737835003b8e6106b276207679432e00cf345f3cc09a39c (from https://www.piwheels.org/simple/bioio-czi/) (requires-python:>=3.9) 2025-11-18T23:46:43,559 Skipping link: No binaries permitted for bioio-czi: https://archive1.piwheels.org/simple/bioio-czi/bioio_czi-1.0.1-py3-none-any.whl#sha256=ffe150c6d8fc1338980bec713b19f0be5ddb347872b105cfeb07a7e4110b210e (from https://www.piwheels.org/simple/bioio-czi/) (requires-python:>=3.9) 2025-11-18T23:46:43,559 Skipping link: No binaries permitted for bioio-czi: https://archive1.piwheels.org/simple/bioio-czi/bioio_czi-1.0.0-py3-none-any.whl#sha256=79a2827cd14e44c2cd82ce96bc6c9c498ee2b80db52b14217295cb5203ab030e (from https://www.piwheels.org/simple/bioio-czi/) (requires-python:>=3.9) 2025-11-18T23:46:43,560 Skipping link: No binaries permitted for bioio-czi: https://archive1.piwheels.org/simple/bioio-czi/bioio_czi-0.9.0-py3-none-any.whl#sha256=6dade884dfd29fac3c8567d4e3b9ea0c69c6d44fe1eff9e1e3e7b01a21edd8df (from https://www.piwheels.org/simple/bioio-czi/) (requires-python:>=3.9) 2025-11-18T23:46:43,560 Skipping link: not a file: https://www.piwheels.org/simple/bioio-czi/ 2025-11-18T23:46:43,561 Skipping link: not a file: https://pypi.org/simple/bioio-czi/ 2025-11-18T23:46:43,581 Given no hashes to check 1 links for project 'bioio-czi': discarding no candidates 2025-11-18T23:46:43,598 Collecting bioio-czi==2.4.1 2025-11-18T23:46:43,601 Created temporary directory: /tmp/pip-unpack-uoepbdc_ 2025-11-18T23:46:43,814 Downloading bioio_czi-2.4.1.tar.gz (2.2 MB) 2025-11-18T23:46:44,485 Added bioio-czi==2.4.1 from https://files.pythonhosted.org/packages/01/4d/4f7352c4b12f2f460b450aaa7507be852b8a2d4ef23c646b404e1167b143/bioio_czi-2.4.1.tar.gz to build tracker '/tmp/pip-build-tracker-23dqpxtx' 2025-11-18T23:46:44,493 Created temporary directory: /tmp/pip-build-env-rbixahgd 2025-11-18T23:46:44,498 Installing build dependencies: started 2025-11-18T23:46:44,500 Running command pip subprocess to install build dependencies 2025-11-18T23:46:45,638 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2025-11-18T23:46:46,294 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2025-11-18T23:46:46,317 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-11-18T23:46:48,046 Collecting setuptools>=65 2025-11-18T23:46:48,133 Using cached https://www.piwheels.org/simple/setuptools/setuptools-80.9.0-py3-none-any.whl (1.2 MB) 2025-11-18T23:46:48,403 Collecting wheel 2025-11-18T23:46:48,423 Using cached https://www.piwheels.org/simple/wheel/wheel-0.45.1-py3-none-any.whl (72 kB) 2025-11-18T23:46:48,757 Collecting setuptools_scm[toml]>=6.2 2025-11-18T23:46:48,779 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-9.2.2-py3-none-any.whl (62 kB) 2025-11-18T23:46:48,975 Collecting packaging>=20 2025-11-18T23:46:48,992 Using cached https://www.piwheels.org/simple/packaging/packaging-25.0-py3-none-any.whl (66 kB) 2025-11-18T23:46:51,921 Installing collected packages: wheel, setuptools, packaging, setuptools_scm 2025-11-18T23:46:52,164 Creating /tmp/pip-build-env-rbixahgd/overlay/local/bin 2025-11-18T23:46:52,167 changing mode of /tmp/pip-build-env-rbixahgd/overlay/local/bin/wheel to 755 2025-11-18T23:46:56,314 changing mode of /tmp/pip-build-env-rbixahgd/overlay/local/bin/setuptools-scm to 755 2025-11-18T23:46:56,343 Successfully installed packaging-25.0 setuptools-80.9.0 setuptools_scm-9.2.2 wheel-0.45.1 2025-11-18T23:46:56,631 Installing build dependencies: finished with status 'done' 2025-11-18T23:46:56,638 Getting requirements to build wheel: started 2025-11-18T23:46:56,639 Running command Getting requirements to build wheel 2025-11-18T23:46:57,376 /tmp/pip-build-env-rbixahgd/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2025-11-18T23:46:57,376 !! 2025-11-18T23:46:57,377 ******************************************************************************** 2025-11-18T23:46:57,378 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2025-11-18T23:46:57,380 By 2026-Feb-18, you need to update your project and remove deprecated calls 2025-11-18T23:46:57,381 or your builds will no longer be supported. 2025-11-18T23:46:57,382 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-11-18T23:46:57,383 ******************************************************************************** 2025-11-18T23:46:57,384 !! 2025-11-18T23:46:57,385 corresp(dist, value, root_dir) 2025-11-18T23:46:57,469 /tmp/pip-build-env-rbixahgd/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-11-18T23:46:57,470 !! 2025-11-18T23:46:57,471 ******************************************************************************** 2025-11-18T23:46:57,472 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-11-18T23:46:57,473 License :: OSI Approved :: GNU General Public License v3 (GPLv3) 2025-11-18T23:46:57,474 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-11-18T23:46:57,475 ******************************************************************************** 2025-11-18T23:46:57,476 !! 2025-11-18T23:46:57,477 dist._finalize_license_expression() 2025-11-18T23:46:57,477 /tmp/pip-build-env-rbixahgd/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-11-18T23:46:57,478 !! 2025-11-18T23:46:57,479 ******************************************************************************** 2025-11-18T23:46:57,480 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-11-18T23:46:57,482 License :: OSI Approved :: GNU General Public License v3 (GPLv3) 2025-11-18T23:46:57,483 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-11-18T23:46:57,483 ******************************************************************************** 2025-11-18T23:46:57,484 !! 2025-11-18T23:46:57,485 self._finalize_license_expression() 2025-11-18T23:46:57,485 running egg_info 2025-11-18T23:46:57,490 writing bioio_czi.egg-info/PKG-INFO 2025-11-18T23:46:57,497 writing dependency_links to bioio_czi.egg-info/dependency_links.txt 2025-11-18T23:46:57,500 writing entry points to bioio_czi.egg-info/entry_points.txt 2025-11-18T23:46:57,504 writing requirements to bioio_czi.egg-info/requires.txt 2025-11-18T23:46:57,505 writing top-level names to bioio_czi.egg-info/top_level.txt 2025-11-18T23:46:57,572 listing git files failed - pretending there aren't any 2025-11-18T23:46:57,577 reading manifest file 'bioio_czi.egg-info/SOURCES.txt' 2025-11-18T23:46:57,585 reading manifest template 'MANIFEST.in' 2025-11-18T23:46:57,610 warning: no previously-included files found matching 'bioio_czi/czi-to-ome-xslt/.git' 2025-11-18T23:46:57,611 warning: no previously-included files found matching 'bioio_czi/tests/**' 2025-11-18T23:46:57,611 adding license file 'LICENSE' 2025-11-18T23:46:57,617 writing manifest file 'bioio_czi.egg-info/SOURCES.txt' 2025-11-18T23:46:57,720 Getting requirements to build wheel: finished with status 'done' 2025-11-18T23:46:57,723 Created temporary directory: /tmp/pip-modern-metadata-1urundvh 2025-11-18T23:46:57,726 Preparing metadata (pyproject.toml): started 2025-11-18T23:46:57,727 Running command Preparing metadata (pyproject.toml) 2025-11-18T23:46:58,397 /tmp/pip-build-env-rbixahgd/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2025-11-18T23:46:58,397 !! 2025-11-18T23:46:58,399 ******************************************************************************** 2025-11-18T23:46:58,399 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2025-11-18T23:46:58,400 By 2026-Feb-18, you need to update your project and remove deprecated calls 2025-11-18T23:46:58,401 or your builds will no longer be supported. 2025-11-18T23:46:58,402 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-11-18T23:46:58,402 ******************************************************************************** 2025-11-18T23:46:58,404 !! 2025-11-18T23:46:58,404 corresp(dist, value, root_dir) 2025-11-18T23:46:58,484 /tmp/pip-build-env-rbixahgd/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-11-18T23:46:58,485 !! 2025-11-18T23:46:58,486 ******************************************************************************** 2025-11-18T23:46:58,487 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-11-18T23:46:58,488 License :: OSI Approved :: GNU General Public License v3 (GPLv3) 2025-11-18T23:46:58,489 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-11-18T23:46:58,490 ******************************************************************************** 2025-11-18T23:46:58,491 !! 2025-11-18T23:46:58,492 dist._finalize_license_expression() 2025-11-18T23:46:58,492 /tmp/pip-build-env-rbixahgd/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-11-18T23:46:58,493 !! 2025-11-18T23:46:58,494 ******************************************************************************** 2025-11-18T23:46:58,495 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-11-18T23:46:58,496 License :: OSI Approved :: GNU General Public License v3 (GPLv3) 2025-11-18T23:46:58,497 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-11-18T23:46:58,497 ******************************************************************************** 2025-11-18T23:46:58,498 !! 2025-11-18T23:46:58,499 self._finalize_license_expression() 2025-11-18T23:46:58,499 running dist_info 2025-11-18T23:46:58,514 creating /tmp/pip-modern-metadata-1urundvh/bioio_czi.egg-info 2025-11-18T23:46:58,515 writing /tmp/pip-modern-metadata-1urundvh/bioio_czi.egg-info/PKG-INFO 2025-11-18T23:46:58,523 writing dependency_links to /tmp/pip-modern-metadata-1urundvh/bioio_czi.egg-info/dependency_links.txt 2025-11-18T23:46:58,524 writing entry points to /tmp/pip-modern-metadata-1urundvh/bioio_czi.egg-info/entry_points.txt 2025-11-18T23:46:58,528 writing requirements to /tmp/pip-modern-metadata-1urundvh/bioio_czi.egg-info/requires.txt 2025-11-18T23:46:58,529 writing top-level names to /tmp/pip-modern-metadata-1urundvh/bioio_czi.egg-info/top_level.txt 2025-11-18T23:46:58,531 writing manifest file '/tmp/pip-modern-metadata-1urundvh/bioio_czi.egg-info/SOURCES.txt' 2025-11-18T23:46:58,591 listing git files failed - pretending there aren't any 2025-11-18T23:46:58,595 reading manifest file '/tmp/pip-modern-metadata-1urundvh/bioio_czi.egg-info/SOURCES.txt' 2025-11-18T23:46:58,597 reading manifest template 'MANIFEST.in' 2025-11-18T23:46:58,620 warning: no previously-included files found matching 'bioio_czi/czi-to-ome-xslt/.git' 2025-11-18T23:46:58,621 warning: no previously-included files found matching 'bioio_czi/tests/**' 2025-11-18T23:46:58,621 adding license file 'LICENSE' 2025-11-18T23:46:58,626 writing manifest file '/tmp/pip-modern-metadata-1urundvh/bioio_czi.egg-info/SOURCES.txt' 2025-11-18T23:46:58,627 creating '/tmp/pip-modern-metadata-1urundvh/bioio_czi-2.4.1.dist-info' 2025-11-18T23:46:58,765 Preparing metadata (pyproject.toml): finished with status 'done' 2025-11-18T23:46:58,777 Source in /tmp/pip-wheel-nl9vx3rh/bioio-czi_2c313698fecc471eb0d6a7f51079d1fb has version 2.4.1, which satisfies requirement bioio-czi==2.4.1 from https://files.pythonhosted.org/packages/01/4d/4f7352c4b12f2f460b450aaa7507be852b8a2d4ef23c646b404e1167b143/bioio_czi-2.4.1.tar.gz 2025-11-18T23:46:58,778 Removed bioio-czi==2.4.1 from https://files.pythonhosted.org/packages/01/4d/4f7352c4b12f2f460b450aaa7507be852b8a2d4ef23c646b404e1167b143/bioio_czi-2.4.1.tar.gz from build tracker '/tmp/pip-build-tracker-23dqpxtx' 2025-11-18T23:46:58,797 Created temporary directory: /tmp/pip-unpack-e8f1fkwc 2025-11-18T23:46:58,798 Building wheels for collected packages: bioio-czi 2025-11-18T23:46:58,803 Created temporary directory: /tmp/pip-wheel-1ppf1rke 2025-11-18T23:46:58,803 Destination directory: /tmp/pip-wheel-1ppf1rke 2025-11-18T23:46:58,806 Building wheel for bioio-czi (pyproject.toml): started 2025-11-18T23:46:58,807 Running command Building wheel for bioio-czi (pyproject.toml) 2025-11-18T23:46:59,466 /tmp/pip-build-env-rbixahgd/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2025-11-18T23:46:59,466 !! 2025-11-18T23:46:59,467 ******************************************************************************** 2025-11-18T23:46:59,468 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2025-11-18T23:46:59,469 By 2026-Feb-18, you need to update your project and remove deprecated calls 2025-11-18T23:46:59,470 or your builds will no longer be supported. 2025-11-18T23:46:59,471 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-11-18T23:46:59,472 ******************************************************************************** 2025-11-18T23:46:59,473 !! 2025-11-18T23:46:59,473 corresp(dist, value, root_dir) 2025-11-18T23:46:59,549 /tmp/pip-build-env-rbixahgd/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-11-18T23:46:59,550 !! 2025-11-18T23:46:59,551 ******************************************************************************** 2025-11-18T23:46:59,551 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-11-18T23:46:59,552 License :: OSI Approved :: GNU General Public License v3 (GPLv3) 2025-11-18T23:46:59,553 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-11-18T23:46:59,554 ******************************************************************************** 2025-11-18T23:46:59,555 !! 2025-11-18T23:46:59,555 dist._finalize_license_expression() 2025-11-18T23:46:59,556 /tmp/pip-build-env-rbixahgd/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-11-18T23:46:59,556 !! 2025-11-18T23:46:59,558 ******************************************************************************** 2025-11-18T23:46:59,558 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-11-18T23:46:59,559 License :: OSI Approved :: GNU General Public License v3 (GPLv3) 2025-11-18T23:46:59,560 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-11-18T23:46:59,561 ******************************************************************************** 2025-11-18T23:46:59,562 !! 2025-11-18T23:46:59,563 self._finalize_license_expression() 2025-11-18T23:46:59,563 running bdist_wheel 2025-11-18T23:46:59,586 running build 2025-11-18T23:46:59,587 running build_py 2025-11-18T23:46:59,595 creating build/lib/scripts 2025-11-18T23:46:59,598 copying scripts/benchmark.py -> build/lib/scripts 2025-11-18T23:46:59,601 creating build/lib/bioio_czi 2025-11-18T23:46:59,602 copying bioio_czi/pixel_sizes.py -> build/lib/bioio_czi 2025-11-18T23:46:59,604 copying bioio_czi/channels.py -> build/lib/bioio_czi 2025-11-18T23:46:59,606 copying bioio_czi/reader_metadata.py -> build/lib/bioio_czi 2025-11-18T23:46:59,608 copying bioio_czi/metadata.py -> build/lib/bioio_czi 2025-11-18T23:46:59,611 copying bioio_czi/bounding_box.py -> build/lib/bioio_czi 2025-11-18T23:46:59,613 copying bioio_czi/__init__.py -> build/lib/bioio_czi 2025-11-18T23:46:59,615 copying bioio_czi/standard_metadata.py -> build/lib/bioio_czi 2025-11-18T23:46:59,617 copying bioio_czi/reader.py -> build/lib/bioio_czi 2025-11-18T23:46:59,620 creating build/lib/bioio_czi/aicspylibczi_reader 2025-11-18T23:46:59,622 copying bioio_czi/aicspylibczi_reader/subblock_metadata.py -> build/lib/bioio_czi/aicspylibczi_reader 2025-11-18T23:46:59,624 copying bioio_czi/aicspylibczi_reader/__init__.py -> build/lib/bioio_czi/aicspylibczi_reader 2025-11-18T23:46:59,626 copying bioio_czi/aicspylibczi_reader/reader.py -> build/lib/bioio_czi/aicspylibczi_reader 2025-11-18T23:46:59,629 creating build/lib/bioio_czi/pylibczirw_reader 2025-11-18T23:46:59,631 copying bioio_czi/pylibczirw_reader/__init__.py -> build/lib/bioio_czi/pylibczirw_reader 2025-11-18T23:46:59,632 copying bioio_czi/pylibczirw_reader/reader.py -> build/lib/bioio_czi/pylibczirw_reader 2025-11-18T23:46:59,636 creating build/lib/bioio_czi/czi-to-ome-xslt/tests 2025-11-18T23:46:59,638 copying bioio_czi/czi-to-ome-xslt/tests/test_transform.py -> build/lib/bioio_czi/czi-to-ome-xslt/tests 2025-11-18T23:46:59,642 running egg_info 2025-11-18T23:46:59,657 writing bioio_czi.egg-info/PKG-INFO 2025-11-18T23:46:59,664 writing dependency_links to bioio_czi.egg-info/dependency_links.txt 2025-11-18T23:46:59,666 writing entry points to bioio_czi.egg-info/entry_points.txt 2025-11-18T23:46:59,669 writing requirements to bioio_czi.egg-info/requires.txt 2025-11-18T23:46:59,670 writing top-level names to bioio_czi.egg-info/top_level.txt 2025-11-18T23:46:59,718 listing git files failed - pretending there aren't any 2025-11-18T23:46:59,723 reading manifest file 'bioio_czi.egg-info/SOURCES.txt' 2025-11-18T23:46:59,729 reading manifest template 'MANIFEST.in' 2025-11-18T23:46:59,753 warning: no previously-included files found matching 'bioio_czi/czi-to-ome-xslt/.git' 2025-11-18T23:46:59,754 warning: no previously-included files found matching 'bioio_czi/tests/**' 2025-11-18T23:46:59,755 adding license file 'LICENSE' 2025-11-18T23:46:59,761 writing manifest file 'bioio_czi.egg-info/SOURCES.txt' 2025-11-18T23:46:59,777 copying bioio_czi/py.typed -> build/lib/bioio_czi 2025-11-18T23:46:59,779 creating build/lib/docs 2025-11-18T23:46:59,780 copying docs/2024_06_02_DS_ZISRAW-FileFormat.pdf -> build/lib/docs 2025-11-18T23:46:59,811 copying bioio_czi/czi-to-ome-xslt/.editorconfig -> build/lib/bioio_czi/czi-to-ome-xslt 2025-11-18T23:46:59,814 copying bioio_czi/czi-to-ome-xslt/.gitignore -> build/lib/bioio_czi/czi-to-ome-xslt 2025-11-18T23:46:59,816 copying bioio_czi/czi-to-ome-xslt/LICENSE -> build/lib/bioio_czi/czi-to-ome-xslt 2025-11-18T23:46:59,818 copying bioio_czi/czi-to-ome-xslt/README.md -> build/lib/bioio_czi/czi-to-ome-xslt 2025-11-18T23:46:59,820 creating build/lib/bioio_czi/czi-to-ome-xslt/.github 2025-11-18T23:46:59,821 copying bioio_czi/czi-to-ome-xslt/.github/PULL_REQUEST_TEMPLATE.md -> build/lib/bioio_czi/czi-to-ome-xslt/.github 2025-11-18T23:46:59,824 creating build/lib/bioio_czi/czi-to-ome-xslt/.github/ISSUE_TEMPLATE 2025-11-18T23:46:59,825 copying bioio_czi/czi-to-ome-xslt/.github/ISSUE_TEMPLATE/bug_report.md -> build/lib/bioio_czi/czi-to-ome-xslt/.github/ISSUE_TEMPLATE 2025-11-18T23:46:59,827 copying bioio_czi/czi-to-ome-xslt/.github/ISSUE_TEMPLATE/feature_request.md -> build/lib/bioio_czi/czi-to-ome-xslt/.github/ISSUE_TEMPLATE 2025-11-18T23:46:59,829 creating build/lib/bioio_czi/czi-to-ome-xslt/.github/workflows 2025-11-18T23:46:59,830 copying bioio_czi/czi-to-ome-xslt/.github/workflows/test-main.yml -> build/lib/bioio_czi/czi-to-ome-xslt/.github/workflows 2025-11-18T23:46:59,833 copying bioio_czi/czi-to-ome-xslt/.github/workflows/test-pr.yml -> build/lib/bioio_czi/czi-to-ome-xslt/.github/workflows 2025-11-18T23:46:59,835 creating build/lib/bioio_czi/czi-to-ome-xslt/zisraw 2025-11-18T23:46:59,836 copying bioio_czi/czi-to-ome-xslt/zisraw/CommonTypes.xsd -> build/lib/bioio_czi/czi-to-ome-xslt/zisraw 2025-11-18T23:46:59,840 copying bioio_czi/czi-to-ome-xslt/zisraw/Dimensions.xsd -> build/lib/bioio_czi/czi-to-ome-xslt/zisraw 2025-11-18T23:46:59,844 copying bioio_czi/czi-to-ome-xslt/zisraw/DisplaySetting.xsd -> build/lib/bioio_czi/czi-to-ome-xslt/zisraw 2025-11-18T23:46:59,847 copying bioio_czi/czi-to-ome-xslt/zisraw/ImageAnalysisSetting.xsd -> build/lib/bioio_czi/czi-to-ome-xslt/zisraw 2025-11-18T23:46:59,850 copying bioio_czi/czi-to-ome-xslt/zisraw/ImageMetadata.xsd -> build/lib/bioio_czi/czi-to-ome-xslt/zisraw 2025-11-18T23:46:59,854 copying bioio_czi/czi-to-ome-xslt/zisraw/Information.xsd -> build/lib/bioio_czi/czi-to-ome-xslt/zisraw 2025-11-18T23:46:59,857 copying bioio_czi/czi-to-ome-xslt/zisraw/Instrument.xsd -> build/lib/bioio_czi/czi-to-ome-xslt/zisraw 2025-11-18T23:46:59,862 copying bioio_czi/czi-to-ome-xslt/zisraw/Layers.xsd -> build/lib/bioio_czi/czi-to-ome-xslt/zisraw 2025-11-18T23:46:59,866 copying bioio_czi/czi-to-ome-xslt/zisraw/PhysiologySetting.xsd -> build/lib/bioio_czi/czi-to-ome-xslt/zisraw 2025-11-18T23:46:59,868 copying bioio_czi/czi-to-ome-xslt/zisraw/Scaling.xsd -> build/lib/bioio_czi/czi-to-ome-xslt/zisraw 2025-11-18T23:46:59,871 copying bioio_czi/czi-to-ome-xslt/zisraw/Timeline.xsd -> build/lib/bioio_czi/czi-to-ome-xslt/zisraw 2025-11-18T23:46:59,874 copying bioio_czi/czi-to-ome-xslt/zisraw/Views.xsd -> build/lib/bioio_czi/czi-to-ome-xslt/zisraw 2025-11-18T23:46:59,876 creating build/lib/bioio_czi/czi-to-ome-xslt/xslt 2025-11-18T23:46:59,877 copying bioio_czi/czi-to-ome-xslt/xslt/Channels.xsl -> build/lib/bioio_czi/czi-to-ome-xslt/xslt 2025-11-18T23:46:59,880 copying bioio_czi/czi-to-ome-xslt/xslt/CommonTypes.xsl -> build/lib/bioio_czi/czi-to-ome-xslt/xslt 2025-11-18T23:46:59,882 copying bioio_czi/czi-to-ome-xslt/xslt/Constants.xsl -> build/lib/bioio_czi/czi-to-ome-xslt/xslt 2025-11-18T23:46:59,884 copying bioio_czi/czi-to-ome-xslt/xslt/DocumentUser.xsl -> build/lib/bioio_czi/czi-to-ome-xslt/xslt 2025-11-18T23:46:59,886 copying bioio_czi/czi-to-ome-xslt/xslt/Image.xsl -> build/lib/bioio_czi/czi-to-ome-xslt/xslt 2025-11-18T23:46:59,889 copying bioio_czi/czi-to-ome-xslt/xslt/ImagingEnvironment.xsl -> build/lib/bioio_czi/czi-to-ome-xslt/xslt 2025-11-18T23:46:59,892 copying bioio_czi/czi-to-ome-xslt/xslt/Instrument.xsl -> build/lib/bioio_czi/czi-to-ome-xslt/xslt 2025-11-18T23:46:59,895 copying bioio_czi/czi-to-ome-xslt/xslt/ObjectiveSettings.xsl -> build/lib/bioio_czi/czi-to-ome-xslt/xslt 2025-11-18T23:46:59,897 copying bioio_czi/czi-to-ome-xslt/xslt/Pixels.xsl -> build/lib/bioio_czi/czi-to-ome-xslt/xslt 2025-11-18T23:46:59,900 copying bioio_czi/czi-to-ome-xslt/xslt/Plane.xsl -> build/lib/bioio_czi/czi-to-ome-xslt/xslt 2025-11-18T23:46:59,902 copying bioio_czi/czi-to-ome-xslt/xslt/Plate.xsl -> build/lib/bioio_czi/czi-to-ome-xslt/xslt 2025-11-18T23:46:59,904 copying bioio_czi/czi-to-ome-xslt/xslt/StructuredAnnotations.xsl -> build/lib/bioio_czi/czi-to-ome-xslt/xslt 2025-11-18T23:46:59,907 copying bioio_czi/czi-to-ome-xslt/xslt/czi-to-ome.xsl -> build/lib/bioio_czi/czi-to-ome-xslt/xslt 2025-11-18T23:46:59,909 copying bioio_czi/czi-to-ome-xslt/tests/python-requirements.txt -> build/lib/bioio_czi/czi-to-ome-xslt/tests 2025-11-18T23:46:59,911 creating build/lib/bioio_czi/czi-to-ome-xslt/ome 2025-11-18T23:46:59,912 copying bioio_czi/czi-to-ome-xslt/ome/ome.xsd -> build/lib/bioio_czi/czi-to-ome-xslt/ome 2025-11-18T23:46:59,919 creating build/lib/bioio_czi/czi-to-ome-xslt/docs 2025-11-18T23:46:59,920 copying bioio_czi/czi-to-ome-xslt/docs/CODE_OF_CONDUCT.md -> build/lib/bioio_czi/czi-to-ome-xslt/docs 2025-11-18T23:46:59,923 copying bioio_czi/czi-to-ome-xslt/docs/CONTRIBUTING.md -> build/lib/bioio_czi/czi-to-ome-xslt/docs 2025-11-18T23:46:59,925 creating build/lib/bioio_czi/czi-to-ome-xslt/tests/resources 2025-11-18T23:46:59,926 copying bioio_czi/czi-to-ome-xslt/tests/resources/031816_Paxillin_2.czi.xml -> build/lib/bioio_czi/czi-to-ome-xslt/tests/resources 2025-11-18T23:46:59,929 copying bioio_czi/czi-to-ome-xslt/tests/resources/Confocal_test_4c.czi.xml -> build/lib/bioio_czi/czi-to-ome-xslt/tests/resources 2025-11-18T23:46:59,942 copying bioio_czi/czi-to-ome-xslt/tests/resources/RBG-8bit.czi.xml -> build/lib/bioio_czi/czi-to-ome-xslt/tests/resources 2025-11-18T23:46:59,944 copying bioio_czi/czi-to-ome-xslt/tests/resources/README.md -> build/lib/bioio_czi/czi-to-ome-xslt/tests/resources 2025-11-18T23:46:59,947 copying bioio_czi/czi-to-ome-xslt/tests/resources/s_1_t_1_c_5_z_20.czi.xml -> build/lib/bioio_czi/czi-to-ome-xslt/tests/resources 2025-11-18T23:46:59,956 copying bioio_czi/czi-to-ome-xslt/tests/resources/s_1_t_1_c_5_z_20_with_subblocks.czi.xml -> build/lib/bioio_czi/czi-to-ome-xslt/tests/resources 2025-11-18T23:46:59,968 copying bioio_czi/czi-to-ome-xslt/tests/resources/s_3_t_1_c_3_z_5.czi.xml -> build/lib/bioio_czi/czi-to-ome-xslt/tests/resources 2025-11-18T23:46:59,975 copying bioio_czi/czi-to-ome-xslt/tests/resources/s_3_t_1_c_3_z_5_with_subblocks.czi.xml -> build/lib/bioio_czi/czi-to-ome-xslt/tests/resources 2025-11-18T23:46:59,986 copying bioio_czi/czi-to-ome-xslt/tests/resources/subblocks.czi.xml -> build/lib/bioio_czi/czi-to-ome-xslt/tests/resources 2025-11-18T23:46:59,995 creating build/lib/bioio_czi/czi-to-ome-xslt/docs/comparison 2025-11-18T23:46:59,997 copying bioio_czi/czi-to-ome-xslt/docs/comparison/bf-converted.xml -> build/lib/bioio_czi/czi-to-ome-xslt/docs/comparison 2025-11-18T23:47:00,020 copying bioio_czi/czi-to-ome-xslt/docs/comparison/xslt-converted.xml -> build/lib/bioio_czi/czi-to-ome-xslt/docs/comparison 2025-11-18T23:47:00,041 installing to build/bdist.linux-armv7l/wheel 2025-11-18T23:47:00,042 running install 2025-11-18T23:47:00,066 running install_lib 2025-11-18T23:47:00,074 creating build/bdist.linux-armv7l/wheel 2025-11-18T23:47:00,076 creating build/bdist.linux-armv7l/wheel/scripts 2025-11-18T23:47:00,078 copying build/lib/scripts/benchmark.py -> build/bdist.linux-armv7l/wheel/./scripts 2025-11-18T23:47:00,081 creating build/bdist.linux-armv7l/wheel/bioio_czi 2025-11-18T23:47:00,082 copying build/lib/bioio_czi/pixel_sizes.py -> build/bdist.linux-armv7l/wheel/./bioio_czi 2025-11-18T23:47:00,086 creating build/bdist.linux-armv7l/wheel/bioio_czi/aicspylibczi_reader 2025-11-18T23:47:00,087 copying build/lib/bioio_czi/aicspylibczi_reader/subblock_metadata.py -> build/bdist.linux-armv7l/wheel/./bioio_czi/aicspylibczi_reader 2025-11-18T23:47:00,090 copying build/lib/bioio_czi/aicspylibczi_reader/__init__.py -> build/bdist.linux-armv7l/wheel/./bioio_czi/aicspylibczi_reader 2025-11-18T23:47:00,092 copying build/lib/bioio_czi/aicspylibczi_reader/reader.py -> build/bdist.linux-armv7l/wheel/./bioio_czi/aicspylibczi_reader 2025-11-18T23:47:00,095 copying build/lib/bioio_czi/channels.py -> build/bdist.linux-armv7l/wheel/./bioio_czi 2025-11-18T23:47:00,098 creating build/bdist.linux-armv7l/wheel/bioio_czi/czi-to-ome-xslt 2025-11-18T23:47:00,099 copying build/lib/bioio_czi/czi-to-ome-xslt/README.md -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt 2025-11-18T23:47:00,103 creating build/bdist.linux-armv7l/wheel/bioio_czi/czi-to-ome-xslt/zisraw 2025-11-18T23:47:00,104 copying build/lib/bioio_czi/czi-to-ome-xslt/zisraw/PhysiologySetting.xsd -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/zisraw 2025-11-18T23:47:00,107 copying build/lib/bioio_czi/czi-to-ome-xslt/zisraw/Layers.xsd -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/zisraw 2025-11-18T23:47:00,111 copying build/lib/bioio_czi/czi-to-ome-xslt/zisraw/ImageAnalysisSetting.xsd -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/zisraw 2025-11-18T23:47:00,114 copying build/lib/bioio_czi/czi-to-ome-xslt/zisraw/ImageMetadata.xsd -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/zisraw 2025-11-18T23:47:00,117 copying build/lib/bioio_czi/czi-to-ome-xslt/zisraw/CommonTypes.xsd -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/zisraw 2025-11-18T23:47:00,121 copying build/lib/bioio_czi/czi-to-ome-xslt/zisraw/Timeline.xsd -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/zisraw 2025-11-18T23:47:00,124 copying build/lib/bioio_czi/czi-to-ome-xslt/zisraw/DisplaySetting.xsd -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/zisraw 2025-11-18T23:47:00,127 copying build/lib/bioio_czi/czi-to-ome-xslt/zisraw/Scaling.xsd -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/zisraw 2025-11-18T23:47:00,129 copying build/lib/bioio_czi/czi-to-ome-xslt/zisraw/Dimensions.xsd -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/zisraw 2025-11-18T23:47:00,135 copying build/lib/bioio_czi/czi-to-ome-xslt/zisraw/Views.xsd -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/zisraw 2025-11-18T23:47:00,137 copying build/lib/bioio_czi/czi-to-ome-xslt/zisraw/Instrument.xsd -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/zisraw 2025-11-18T23:47:00,141 copying build/lib/bioio_czi/czi-to-ome-xslt/zisraw/Information.xsd -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/zisraw 2025-11-18T23:47:00,145 copying build/lib/bioio_czi/czi-to-ome-xslt/.editorconfig -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt 2025-11-18T23:47:00,147 copying build/lib/bioio_czi/czi-to-ome-xslt/.gitignore -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt 2025-11-18T23:47:00,150 copying build/lib/bioio_czi/czi-to-ome-xslt/LICENSE -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt 2025-11-18T23:47:00,153 creating build/bdist.linux-armv7l/wheel/bioio_czi/czi-to-ome-xslt/xslt 2025-11-18T23:47:00,154 copying build/lib/bioio_czi/czi-to-ome-xslt/xslt/StructuredAnnotations.xsl -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/xslt 2025-11-18T23:47:00,157 copying build/lib/bioio_czi/czi-to-ome-xslt/xslt/DocumentUser.xsl -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/xslt 2025-11-18T23:47:00,159 copying build/lib/bioio_czi/czi-to-ome-xslt/xslt/Plane.xsl -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/xslt 2025-11-18T23:47:00,161 copying build/lib/bioio_czi/czi-to-ome-xslt/xslt/Plate.xsl -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/xslt 2025-11-18T23:47:00,163 copying build/lib/bioio_czi/czi-to-ome-xslt/xslt/Image.xsl -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/xslt 2025-11-18T23:47:00,166 copying build/lib/bioio_czi/czi-to-ome-xslt/xslt/czi-to-ome.xsl -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/xslt 2025-11-18T23:47:00,168 copying build/lib/bioio_czi/czi-to-ome-xslt/xslt/Channels.xsl -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/xslt 2025-11-18T23:47:00,171 copying build/lib/bioio_czi/czi-to-ome-xslt/xslt/Constants.xsl -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/xslt 2025-11-18T23:47:00,173 copying build/lib/bioio_czi/czi-to-ome-xslt/xslt/ImagingEnvironment.xsl -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/xslt 2025-11-18T23:47:00,176 copying build/lib/bioio_czi/czi-to-ome-xslt/xslt/CommonTypes.xsl -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/xslt 2025-11-18T23:47:00,178 copying build/lib/bioio_czi/czi-to-ome-xslt/xslt/Pixels.xsl -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/xslt 2025-11-18T23:47:00,181 copying build/lib/bioio_czi/czi-to-ome-xslt/xslt/Instrument.xsl -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/xslt 2025-11-18T23:47:00,184 copying build/lib/bioio_czi/czi-to-ome-xslt/xslt/ObjectiveSettings.xsl -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/xslt 2025-11-18T23:47:00,187 creating build/bdist.linux-armv7l/wheel/bioio_czi/czi-to-ome-xslt/tests 2025-11-18T23:47:00,188 copying build/lib/bioio_czi/czi-to-ome-xslt/tests/python-requirements.txt -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/tests 2025-11-18T23:47:00,191 copying build/lib/bioio_czi/czi-to-ome-xslt/tests/test_transform.py -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/tests 2025-11-18T23:47:00,194 creating build/bdist.linux-armv7l/wheel/bioio_czi/czi-to-ome-xslt/tests/resources 2025-11-18T23:47:00,195 copying build/lib/bioio_czi/czi-to-ome-xslt/tests/resources/RBG-8bit.czi.xml -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/tests/resources 2025-11-18T23:47:00,198 copying build/lib/bioio_czi/czi-to-ome-xslt/tests/resources/README.md -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/tests/resources 2025-11-18T23:47:00,200 copying build/lib/bioio_czi/czi-to-ome-xslt/tests/resources/s_1_t_1_c_5_z_20.czi.xml -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/tests/resources 2025-11-18T23:47:00,210 copying build/lib/bioio_czi/czi-to-ome-xslt/tests/resources/Confocal_test_4c.czi.xml -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/tests/resources 2025-11-18T23:47:00,224 copying build/lib/bioio_czi/czi-to-ome-xslt/tests/resources/031816_Paxillin_2.czi.xml -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/tests/resources 2025-11-18T23:47:00,227 copying build/lib/bioio_czi/czi-to-ome-xslt/tests/resources/s_3_t_1_c_3_z_5.czi.xml -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/tests/resources 2025-11-18T23:47:00,233 copying build/lib/bioio_czi/czi-to-ome-xslt/tests/resources/subblocks.czi.xml -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/tests/resources 2025-11-18T23:47:00,244 copying build/lib/bioio_czi/czi-to-ome-xslt/tests/resources/s_3_t_1_c_3_z_5_with_subblocks.czi.xml -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/tests/resources 2025-11-18T23:47:00,253 copying build/lib/bioio_czi/czi-to-ome-xslt/tests/resources/s_1_t_1_c_5_z_20_with_subblocks.czi.xml -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/tests/resources 2025-11-18T23:47:00,267 creating build/bdist.linux-armv7l/wheel/bioio_czi/czi-to-ome-xslt/.github 2025-11-18T23:47:00,269 creating build/bdist.linux-armv7l/wheel/bioio_czi/czi-to-ome-xslt/.github/workflows 2025-11-18T23:47:00,270 copying build/lib/bioio_czi/czi-to-ome-xslt/.github/workflows/test-pr.yml -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/.github/workflows 2025-11-18T23:47:00,272 copying build/lib/bioio_czi/czi-to-ome-xslt/.github/workflows/test-main.yml -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/.github/workflows 2025-11-18T23:47:00,274 creating build/bdist.linux-armv7l/wheel/bioio_czi/czi-to-ome-xslt/.github/ISSUE_TEMPLATE 2025-11-18T23:47:00,275 copying build/lib/bioio_czi/czi-to-ome-xslt/.github/ISSUE_TEMPLATE/bug_report.md -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/.github/ISSUE_TEMPLATE 2025-11-18T23:47:00,278 copying build/lib/bioio_czi/czi-to-ome-xslt/.github/ISSUE_TEMPLATE/feature_request.md -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/.github/ISSUE_TEMPLATE 2025-11-18T23:47:00,279 copying build/lib/bioio_czi/czi-to-ome-xslt/.github/PULL_REQUEST_TEMPLATE.md -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/.github 2025-11-18T23:47:00,282 creating build/bdist.linux-armv7l/wheel/bioio_czi/czi-to-ome-xslt/ome 2025-11-18T23:47:00,283 copying build/lib/bioio_czi/czi-to-ome-xslt/ome/ome.xsd -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/ome 2025-11-18T23:47:00,292 creating build/bdist.linux-armv7l/wheel/bioio_czi/czi-to-ome-xslt/docs 2025-11-18T23:47:00,293 copying build/lib/bioio_czi/czi-to-ome-xslt/docs/CONTRIBUTING.md -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/docs 2025-11-18T23:47:00,296 creating build/bdist.linux-armv7l/wheel/bioio_czi/czi-to-ome-xslt/docs/comparison 2025-11-18T23:47:00,297 copying build/lib/bioio_czi/czi-to-ome-xslt/docs/comparison/xslt-converted.xml -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/docs/comparison 2025-11-18T23:47:00,300 copying build/lib/bioio_czi/czi-to-ome-xslt/docs/comparison/bf-converted.xml -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/docs/comparison 2025-11-18T23:47:00,322 copying build/lib/bioio_czi/czi-to-ome-xslt/docs/CODE_OF_CONDUCT.md -> build/bdist.linux-armv7l/wheel/./bioio_czi/czi-to-ome-xslt/docs 2025-11-18T23:47:00,325 copying build/lib/bioio_czi/reader_metadata.py -> build/bdist.linux-armv7l/wheel/./bioio_czi 2025-11-18T23:47:00,327 creating build/bdist.linux-armv7l/wheel/bioio_czi/pylibczirw_reader 2025-11-18T23:47:00,328 copying build/lib/bioio_czi/pylibczirw_reader/__init__.py -> build/bdist.linux-armv7l/wheel/./bioio_czi/pylibczirw_reader 2025-11-18T23:47:00,330 copying build/lib/bioio_czi/pylibczirw_reader/reader.py -> build/bdist.linux-armv7l/wheel/./bioio_czi/pylibczirw_reader 2025-11-18T23:47:00,333 copying build/lib/bioio_czi/metadata.py -> build/bdist.linux-armv7l/wheel/./bioio_czi 2025-11-18T23:47:00,335 copying build/lib/bioio_czi/bounding_box.py -> build/bdist.linux-armv7l/wheel/./bioio_czi 2025-11-18T23:47:00,337 copying build/lib/bioio_czi/__init__.py -> build/bdist.linux-armv7l/wheel/./bioio_czi 2025-11-18T23:47:00,342 copying build/lib/bioio_czi/standard_metadata.py -> build/bdist.linux-armv7l/wheel/./bioio_czi 2025-11-18T23:47:00,345 copying build/lib/bioio_czi/reader.py -> build/bdist.linux-armv7l/wheel/./bioio_czi 2025-11-18T23:47:00,348 copying build/lib/bioio_czi/py.typed -> build/bdist.linux-armv7l/wheel/./bioio_czi 2025-11-18T23:47:00,351 creating build/bdist.linux-armv7l/wheel/docs 2025-11-18T23:47:00,353 copying build/lib/docs/2024_06_02_DS_ZISRAW-FileFormat.pdf -> build/bdist.linux-armv7l/wheel/./docs 2025-11-18T23:47:00,397 running install_egg_info 2025-11-18T23:47:00,407 Copying bioio_czi.egg-info to build/bdist.linux-armv7l/wheel/./bioio_czi-2.4.1-py3.11.egg-info 2025-11-18T23:47:00,426 running install_scripts 2025-11-18T23:47:00,442 creating build/bdist.linux-armv7l/wheel/bioio_czi-2.4.1.dist-info/WHEEL 2025-11-18T23:47:00,445 creating '/tmp/pip-wheel-1ppf1rke/.tmp-5pomdhpo/bioio_czi-2.4.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-11-18T23:47:00,448 adding 'bioio_czi/__init__.py' 2025-11-18T23:47:00,449 adding 'bioio_czi/bounding_box.py' 2025-11-18T23:47:00,450 adding 'bioio_czi/channels.py' 2025-11-18T23:47:00,452 adding 'bioio_czi/metadata.py' 2025-11-18T23:47:00,453 adding 'bioio_czi/pixel_sizes.py' 2025-11-18T23:47:00,454 adding 'bioio_czi/py.typed' 2025-11-18T23:47:00,457 adding 'bioio_czi/reader.py' 2025-11-18T23:47:00,458 adding 'bioio_czi/reader_metadata.py' 2025-11-18T23:47:00,459 adding 'bioio_czi/standard_metadata.py' 2025-11-18T23:47:00,461 adding 'bioio_czi/aicspylibczi_reader/__init__.py' 2025-11-18T23:47:00,466 adding 'bioio_czi/aicspylibczi_reader/reader.py' 2025-11-18T23:47:00,467 adding 'bioio_czi/aicspylibczi_reader/subblock_metadata.py' 2025-11-18T23:47:00,469 adding 'bioio_czi/czi-to-ome-xslt/.editorconfig' 2025-11-18T23:47:00,471 adding 'bioio_czi/czi-to-ome-xslt/.gitignore' 2025-11-18T23:47:00,472 adding 'bioio_czi/czi-to-ome-xslt/LICENSE' 2025-11-18T23:47:00,473 adding 'bioio_czi/czi-to-ome-xslt/README.md' 2025-11-18T23:47:00,475 adding 'bioio_czi/czi-to-ome-xslt/.github/PULL_REQUEST_TEMPLATE.md' 2025-11-18T23:47:00,477 adding 'bioio_czi/czi-to-ome-xslt/.github/ISSUE_TEMPLATE/bug_report.md' 2025-11-18T23:47:00,478 adding 'bioio_czi/czi-to-ome-xslt/.github/ISSUE_TEMPLATE/feature_request.md' 2025-11-18T23:47:00,480 adding 'bioio_czi/czi-to-ome-xslt/.github/workflows/test-main.yml' 2025-11-18T23:47:00,481 adding 'bioio_czi/czi-to-ome-xslt/.github/workflows/test-pr.yml' 2025-11-18T23:47:00,483 adding 'bioio_czi/czi-to-ome-xslt/docs/CODE_OF_CONDUCT.md' 2025-11-18T23:47:00,484 adding 'bioio_czi/czi-to-ome-xslt/docs/CONTRIBUTING.md' 2025-11-18T23:47:00,517 adding 'bioio_czi/czi-to-ome-xslt/docs/comparison/bf-converted.xml' 2025-11-18T23:47:00,524 adding 'bioio_czi/czi-to-ome-xslt/docs/comparison/xslt-converted.xml' 2025-11-18T23:47:00,542 adding 'bioio_czi/czi-to-ome-xslt/ome/ome.xsd' 2025-11-18T23:47:00,545 adding 'bioio_czi/czi-to-ome-xslt/tests/python-requirements.txt' 2025-11-18T23:47:00,547 adding 'bioio_czi/czi-to-ome-xslt/tests/test_transform.py' 2025-11-18T23:47:00,550 adding 'bioio_czi/czi-to-ome-xslt/tests/resources/031816_Paxillin_2.czi.xml' 2025-11-18T23:47:00,586 adding 'bioio_czi/czi-to-ome-xslt/tests/resources/Confocal_test_4c.czi.xml' 2025-11-18T23:47:00,592 adding 'bioio_czi/czi-to-ome-xslt/tests/resources/RBG-8bit.czi.xml' 2025-11-18T23:47:00,593 adding 'bioio_czi/czi-to-ome-xslt/tests/resources/README.md' 2025-11-18T23:47:00,612 adding 'bioio_czi/czi-to-ome-xslt/tests/resources/s_1_t_1_c_5_z_20.czi.xml' 2025-11-18T23:47:00,649 adding 'bioio_czi/czi-to-ome-xslt/tests/resources/s_1_t_1_c_5_z_20_with_subblocks.czi.xml' 2025-11-18T23:47:00,668 adding 'bioio_czi/czi-to-ome-xslt/tests/resources/s_3_t_1_c_3_z_5.czi.xml' 2025-11-18T23:47:00,689 adding 'bioio_czi/czi-to-ome-xslt/tests/resources/s_3_t_1_c_3_z_5_with_subblocks.czi.xml' 2025-11-18T23:47:00,711 adding 'bioio_czi/czi-to-ome-xslt/tests/resources/subblocks.czi.xml' 2025-11-18T23:47:00,716 adding 'bioio_czi/czi-to-ome-xslt/xslt/Channels.xsl' 2025-11-18T23:47:00,717 adding 'bioio_czi/czi-to-ome-xslt/xslt/CommonTypes.xsl' 2025-11-18T23:47:00,718 adding 'bioio_czi/czi-to-ome-xslt/xslt/Constants.xsl' 2025-11-18T23:47:00,720 adding 'bioio_czi/czi-to-ome-xslt/xslt/DocumentUser.xsl' 2025-11-18T23:47:00,721 adding 'bioio_czi/czi-to-ome-xslt/xslt/Image.xsl' 2025-11-18T23:47:00,723 adding 'bioio_czi/czi-to-ome-xslt/xslt/ImagingEnvironment.xsl' 2025-11-18T23:47:00,725 adding 'bioio_czi/czi-to-ome-xslt/xslt/Instrument.xsl' 2025-11-18T23:47:00,726 adding 'bioio_czi/czi-to-ome-xslt/xslt/ObjectiveSettings.xsl' 2025-11-18T23:47:00,727 adding 'bioio_czi/czi-to-ome-xslt/xslt/Pixels.xsl' 2025-11-18T23:47:00,729 adding 'bioio_czi/czi-to-ome-xslt/xslt/Plane.xsl' 2025-11-18T23:47:00,730 adding 'bioio_czi/czi-to-ome-xslt/xslt/Plate.xsl' 2025-11-18T23:47:00,731 adding 'bioio_czi/czi-to-ome-xslt/xslt/StructuredAnnotations.xsl' 2025-11-18T23:47:00,732 adding 'bioio_czi/czi-to-ome-xslt/xslt/czi-to-ome.xsl' 2025-11-18T23:47:00,735 adding 'bioio_czi/czi-to-ome-xslt/zisraw/CommonTypes.xsd' 2025-11-18T23:47:00,745 adding 'bioio_czi/czi-to-ome-xslt/zisraw/Dimensions.xsd' 2025-11-18T23:47:00,747 adding 'bioio_czi/czi-to-ome-xslt/zisraw/DisplaySetting.xsd' 2025-11-18T23:47:00,749 adding 'bioio_czi/czi-to-ome-xslt/zisraw/ImageAnalysisSetting.xsd' 2025-11-18T23:47:00,753 adding 'bioio_czi/czi-to-ome-xslt/zisraw/ImageMetadata.xsd' 2025-11-18T23:47:00,757 adding 'bioio_czi/czi-to-ome-xslt/zisraw/Information.xsd' 2025-11-18T23:47:00,761 adding 'bioio_czi/czi-to-ome-xslt/zisraw/Instrument.xsd' 2025-11-18T23:47:00,766 adding 'bioio_czi/czi-to-ome-xslt/zisraw/Layers.xsd' 2025-11-18T23:47:00,767 adding 'bioio_czi/czi-to-ome-xslt/zisraw/PhysiologySetting.xsd' 2025-11-18T23:47:00,769 adding 'bioio_czi/czi-to-ome-xslt/zisraw/Scaling.xsd' 2025-11-18T23:47:00,770 adding 'bioio_czi/czi-to-ome-xslt/zisraw/Timeline.xsd' 2025-11-18T23:47:00,772 adding 'bioio_czi/czi-to-ome-xslt/zisraw/Views.xsd' 2025-11-18T23:47:00,773 adding 'bioio_czi/pylibczirw_reader/__init__.py' 2025-11-18T23:47:00,776 adding 'bioio_czi/pylibczirw_reader/reader.py' 2025-11-18T23:47:00,783 adding 'bioio_czi-2.4.1.dist-info/licenses/LICENSE' 2025-11-18T23:47:00,992 adding 'docs/2024_06_02_DS_ZISRAW-FileFormat.pdf' 2025-11-18T23:47:01,005 adding 'scripts/benchmark.py' 2025-11-18T23:47:01,012 adding 'bioio_czi-2.4.1.dist-info/METADATA' 2025-11-18T23:47:01,014 adding 'bioio_czi-2.4.1.dist-info/WHEEL' 2025-11-18T23:47:01,015 adding 'bioio_czi-2.4.1.dist-info/entry_points.txt' 2025-11-18T23:47:01,015 adding 'bioio_czi-2.4.1.dist-info/top_level.txt' 2025-11-18T23:47:01,017 adding 'bioio_czi-2.4.1.dist-info/RECORD' 2025-11-18T23:47:01,045 removing build/bdist.linux-armv7l/wheel 2025-11-18T23:47:01,172 Building wheel for bioio-czi (pyproject.toml): finished with status 'done' 2025-11-18T23:47:01,228 Created wheel for bioio-czi: filename=bioio_czi-2.4.1-py3-none-any.whl size=2212730 sha256=e757f6727a292cfc6256a15508d6bf7174d67e7b3db0a6c5f1ea76ede30ae054 2025-11-18T23:47:01,229 Stored in directory: /tmp/pip-ephem-wheel-cache-5kgygp0v/wheels/a0/c5/0c/046bf0ecf3f13b52c10826ccec38a58a03d044b9d7c7bb704c 2025-11-18T23:47:01,267 Successfully built bioio-czi 2025-11-18T23:47:01,335 Removed build tracker: '/tmp/pip-build-tracker-23dqpxtx'