2025-11-24T17:59:51,846 Created temporary directory: /tmp/pip-ephem-wheel-cache-2mnlgu3o
2025-11-24T17:59:51,847 Created temporary directory: /tmp/pip-build-tracker-f9l5_l2j
2025-11-24T17:59:51,848 Initialized build tracking at /tmp/pip-build-tracker-f9l5_l2j
2025-11-24T17:59:51,849 Created build tracker: /tmp/pip-build-tracker-f9l5_l2j
2025-11-24T17:59:51,849 Entered build tracker: /tmp/pip-build-tracker-f9l5_l2j
2025-11-24T17:59:51,850 Created temporary directory: /tmp/pip-wheel-tlkvvgzq
2025-11-24T17:59:51,853 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2025-11-24T17:59:51,855 Created temporary directory: /tmp/pip-ephem-wheel-cache-sdq5y5r7
2025-11-24T17:59:51,877 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2025-11-24T17:59:51,880 2 location(s) to search for versions of chembl-structure-pipeline:
2025-11-24T17:59:51,880 * https://pypi.org/simple/chembl-structure-pipeline/
2025-11-24T17:59:51,880 * https://www.piwheels.org/simple/chembl-structure-pipeline/
2025-11-24T17:59:51,881 Fetching project page and analyzing links: https://pypi.org/simple/chembl-structure-pipeline/
2025-11-24T17:59:51,882 Getting page https://pypi.org/simple/chembl-structure-pipeline/
2025-11-24T17:59:51,883 Found index url https://pypi.org/simple
2025-11-24T17:59:52,023 Fetched page https://pypi.org/simple/chembl-structure-pipeline/ as application/vnd.pypi.simple.v1+json
2025-11-24T17:59:52,025   Skipping link: No binaries permitted for chembl-structure-pipeline: https://files.pythonhosted.org/packages/2c/9a/fb66f05852d8daa3ffd35c4d484a16a25a42c1d6a311cbc2d5def8371b42/chembl_structure_pipeline-1.1.0-py3-none-any.whl (from https://pypi.org/simple/chembl-structure-pipeline/)
2025-11-24T17:59:52,026   Found link https://files.pythonhosted.org/packages/15/3c/a98821abe08af310512cfe77f239f73a3574c556d3034208ed326c62d142/chembl_structure_pipeline-1.1.0.tar.gz (from https://pypi.org/simple/chembl-structure-pipeline/), version: 1.1.0
2025-11-24T17:59:52,027   Skipping link: No binaries permitted for chembl-structure-pipeline: https://files.pythonhosted.org/packages/db/54/44dff855e912c13a8974c73f7ecc0bb5239c34d02fc7563078e8392f13e6/chembl_structure_pipeline-1.2.0-py3-none-any.whl (from https://pypi.org/simple/chembl-structure-pipeline/)
2025-11-24T17:59:52,028   Found link https://files.pythonhosted.org/packages/fb/16/15e308f46f3b1991ec672b53f3dff85d6ff47e4c8bcd4bc61dce7ab0b189/chembl_structure_pipeline-1.2.0.tar.gz (from https://pypi.org/simple/chembl-structure-pipeline/), version: 1.2.0
2025-11-24T17:59:52,028   Skipping link: No binaries permitted for chembl-structure-pipeline: https://files.pythonhosted.org/packages/97/57/6813202cfe8afe187ac01c3e96396fca5727309de016309b3d1fda351b84/chembl_structure_pipeline-1.2.2-py3-none-any.whl (from https://pypi.org/simple/chembl-structure-pipeline/)
2025-11-24T17:59:52,029   Found link https://files.pythonhosted.org/packages/a8/a8/b37b0d4373e534c036a4e201f72e47e928c2a806f9699af60d126699b9b9/chembl_structure_pipeline-1.2.2.tar.gz (from https://pypi.org/simple/chembl-structure-pipeline/), version: 1.2.2
2025-11-24T17:59:52,030   Skipping link: No binaries permitted for chembl-structure-pipeline: https://files.pythonhosted.org/packages/00/5c/b9d714ff6381793e811ef96daa744350e1c5f233e0f15044e1f6160aeeaa/chembl_structure_pipeline-1.2.4-py3-none-any.whl (from https://pypi.org/simple/chembl-structure-pipeline/)
2025-11-24T17:59:52,030   Found link https://files.pythonhosted.org/packages/56/29/4ce697880f4b239dc96e89c371d7a86c43cd08e3f9b54c375510f49f19d8/chembl_structure_pipeline-1.2.4.tar.gz (from https://pypi.org/simple/chembl-structure-pipeline/), version: 1.2.4
2025-11-24T17:59:52,031 Fetching project page and analyzing links: https://www.piwheels.org/simple/chembl-structure-pipeline/
2025-11-24T17:59:52,032 Getting page https://www.piwheels.org/simple/chembl-structure-pipeline/
2025-11-24T17:59:52,033 Found index url https://www.piwheels.org/simple
2025-11-24T17:59:52,196 Fetched page https://www.piwheels.org/simple/chembl-structure-pipeline/ as text/html
2025-11-24T17:59:52,198   Skipping link: No binaries permitted for chembl-structure-pipeline: https://archive1.piwheels.org/simple/chembl-structure-pipeline/chembl_structure_pipeline-1.2.2-py3-none-any.whl#sha256=059535d18ccb8d8f201c7ea236b4f65072773797477c13d77a93796a1419f2c9 (from https://www.piwheels.org/simple/chembl-structure-pipeline/)
2025-11-24T17:59:52,198   Skipping link: No binaries permitted for chembl-structure-pipeline: https://archive1.piwheels.org/simple/chembl-structure-pipeline/chembl_structure_pipeline-1.2.0-py3-none-any.whl#sha256=3a4f824e2a81b64e6207ead421f65c0dc0ab04d33a15408c62acc4e0ef6fcf2b (from https://www.piwheels.org/simple/chembl-structure-pipeline/)
2025-11-24T17:59:52,199   Skipping link: No binaries permitted for chembl-structure-pipeline: https://archive1.piwheels.org/simple/chembl-structure-pipeline/chembl_structure_pipeline-1.1.0-py3-none-any.whl#sha256=255697045ef7b6f8d7323ebc2f676a239f358debba4b964455b0d262968eb89c (from https://www.piwheels.org/simple/chembl-structure-pipeline/)
2025-11-24T17:59:52,199 Skipping link: not a file: https://www.piwheels.org/simple/chembl-structure-pipeline/
2025-11-24T17:59:52,200 Skipping link: not a file: https://pypi.org/simple/chembl-structure-pipeline/
2025-11-24T17:59:52,218 Given no hashes to check 1 links for project 'chembl-structure-pipeline': discarding no candidates
2025-11-24T17:59:52,237 Collecting chembl-structure-pipeline==1.2.4
2025-11-24T17:59:52,239   Created temporary directory: /tmp/pip-unpack-4b240ji2
2025-11-24T17:59:52,452   Downloading chembl_structure_pipeline-1.2.4.tar.gz (16 kB)
2025-11-24T17:59:52,491   Added chembl-structure-pipeline==1.2.4 from https://files.pythonhosted.org/packages/56/29/4ce697880f4b239dc96e89c371d7a86c43cd08e3f9b54c375510f49f19d8/chembl_structure_pipeline-1.2.4.tar.gz to build tracker '/tmp/pip-build-tracker-f9l5_l2j'
2025-11-24T17:59:52,493   Running setup.py (path:/tmp/pip-wheel-tlkvvgzq/chembl-structure-pipeline_b1ab9167eb1c4dec9d2ff966762c4644/setup.py) egg_info for package chembl-structure-pipeline
2025-11-24T17:59:52,494   Created temporary directory: /tmp/pip-pip-egg-info-etx5b393
2025-11-24T17:59:52,494   Preparing metadata (setup.py): started
2025-11-24T17:59:52,496   Running command python setup.py egg_info
2025-11-24T17:59:53,007   No `name` configuration, performing automatic discovery
2025-11-24T17:59:53,363   running egg_info
2025-11-24T17:59:53,390   creating /tmp/pip-pip-egg-info-etx5b393/chembl_structure_pipeline.egg-info
2025-11-24T17:59:53,391   writing /tmp/pip-pip-egg-info-etx5b393/chembl_structure_pipeline.egg-info/PKG-INFO
2025-11-24T17:59:53,395   writing dependency_links to /tmp/pip-pip-egg-info-etx5b393/chembl_structure_pipeline.egg-info/dependency_links.txt
2025-11-24T17:59:53,397   writing requirements to /tmp/pip-pip-egg-info-etx5b393/chembl_structure_pipeline.egg-info/requires.txt
2025-11-24T17:59:53,398   writing top-level names to /tmp/pip-pip-egg-info-etx5b393/chembl_structure_pipeline.egg-info/top_level.txt
2025-11-24T17:59:53,399   writing manifest file '/tmp/pip-pip-egg-info-etx5b393/chembl_structure_pipeline.egg-info/SOURCES.txt'
2025-11-24T17:59:53,485   reading manifest file '/tmp/pip-pip-egg-info-etx5b393/chembl_structure_pipeline.egg-info/SOURCES.txt'
2025-11-24T17:59:53,486   adding license file 'LICENSE'
2025-11-24T17:59:53,489   writing manifest file '/tmp/pip-pip-egg-info-etx5b393/chembl_structure_pipeline.egg-info/SOURCES.txt'
2025-11-24T17:59:53,597   Preparing metadata (setup.py): finished with status 'done'
2025-11-24T17:59:53,602   Source in /tmp/pip-wheel-tlkvvgzq/chembl-structure-pipeline_b1ab9167eb1c4dec9d2ff966762c4644 has version 1.2.4, which satisfies requirement chembl-structure-pipeline==1.2.4 from https://files.pythonhosted.org/packages/56/29/4ce697880f4b239dc96e89c371d7a86c43cd08e3f9b54c375510f49f19d8/chembl_structure_pipeline-1.2.4.tar.gz
2025-11-24T17:59:53,603   Removed chembl-structure-pipeline==1.2.4 from https://files.pythonhosted.org/packages/56/29/4ce697880f4b239dc96e89c371d7a86c43cd08e3f9b54c375510f49f19d8/chembl_structure_pipeline-1.2.4.tar.gz from build tracker '/tmp/pip-build-tracker-f9l5_l2j'
2025-11-24T17:59:53,608 Created temporary directory: /tmp/pip-unpack-q4m_ixtf
2025-11-24T17:59:53,608 Building wheels for collected packages: chembl-structure-pipeline
2025-11-24T17:59:53,612   Created temporary directory: /tmp/pip-wheel-haepiv2m
2025-11-24T17:59:53,613   Building wheel for chembl-structure-pipeline (setup.py): started
2025-11-24T17:59:53,614   Destination directory: /tmp/pip-wheel-haepiv2m
2025-11-24T17:59:53,615   Running command python setup.py bdist_wheel
2025-11-24T17:59:54,112   No `name` configuration, performing automatic discovery
2025-11-24T17:59:54,439   running bdist_wheel
2025-11-24T17:59:54,566   running build
2025-11-24T17:59:54,567   running build_py
2025-11-24T17:59:54,596   creating build/lib/chembl_structure_pipeline
2025-11-24T17:59:54,600   copying chembl_structure_pipeline/exclude_flag.py -> build/lib/chembl_structure_pipeline
2025-11-24T17:59:54,602   copying chembl_structure_pipeline/__init__.py -> build/lib/chembl_structure_pipeline
2025-11-24T17:59:54,604   copying chembl_structure_pipeline/checker.py -> build/lib/chembl_structure_pipeline
2025-11-24T17:59:54,607   copying chembl_structure_pipeline/standardizer.py -> build/lib/chembl_structure_pipeline
2025-11-24T17:59:54,611   creating build/lib/chembl_structure_pipeline/data
2025-11-24T17:59:54,612   copying chembl_structure_pipeline/data/salts.smi -> build/lib/chembl_structure_pipeline/data
2025-11-24T17:59:54,614   copying chembl_structure_pipeline/data/solvents.smi -> build/lib/chembl_structure_pipeline/data
2025-11-24T17:59:54,642   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2025-11-24T17:59:54,643   !!

2025-11-24T17:59:54,644           ********************************************************************************
2025-11-24T17:59:54,645           Please avoid running ``setup.py`` directly.
2025-11-24T17:59:54,645           Instead, use pypa/build, pypa/installer or other
2025-11-24T17:59:54,646           standards-based tools.

2025-11-24T17:59:54,647           This deprecation is overdue, please update your project and remove deprecated
2025-11-24T17:59:54,647           calls to avoid build errors in the future.

2025-11-24T17:59:54,649           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2025-11-24T17:59:54,649           ********************************************************************************

2025-11-24T17:59:54,650   !!
2025-11-24T17:59:54,651     self.initialize_options()
2025-11-24T17:59:54,670   installing to build/bdist.linux-armv7l/wheel
2025-11-24T17:59:54,671   running install
2025-11-24T17:59:54,694   running install_lib
2025-11-24T17:59:54,721   creating build/bdist.linux-armv7l/wheel
2025-11-24T17:59:54,723   creating build/bdist.linux-armv7l/wheel/chembl_structure_pipeline
2025-11-24T17:59:54,725   copying build/lib/chembl_structure_pipeline/exclude_flag.py -> build/bdist.linux-armv7l/wheel/./chembl_structure_pipeline
2025-11-24T17:59:54,727   copying build/lib/chembl_structure_pipeline/__init__.py -> build/bdist.linux-armv7l/wheel/./chembl_structure_pipeline
2025-11-24T17:59:54,729   copying build/lib/chembl_structure_pipeline/checker.py -> build/bdist.linux-armv7l/wheel/./chembl_structure_pipeline
2025-11-24T17:59:54,732   creating build/bdist.linux-armv7l/wheel/chembl_structure_pipeline/data
2025-11-24T17:59:54,733   copying build/lib/chembl_structure_pipeline/data/salts.smi -> build/bdist.linux-armv7l/wheel/./chembl_structure_pipeline/data
2025-11-24T17:59:54,735   copying build/lib/chembl_structure_pipeline/data/solvents.smi -> build/bdist.linux-armv7l/wheel/./chembl_structure_pipeline/data
2025-11-24T17:59:54,737   copying build/lib/chembl_structure_pipeline/standardizer.py -> build/bdist.linux-armv7l/wheel/./chembl_structure_pipeline
2025-11-24T17:59:54,739   running install_egg_info
2025-11-24T17:59:54,774   running egg_info
2025-11-24T17:59:54,800   writing chembl_structure_pipeline.egg-info/PKG-INFO
2025-11-24T17:59:54,803   writing dependency_links to chembl_structure_pipeline.egg-info/dependency_links.txt
2025-11-24T17:59:54,805   writing requirements to chembl_structure_pipeline.egg-info/requires.txt
2025-11-24T17:59:54,806   writing top-level names to chembl_structure_pipeline.egg-info/top_level.txt
2025-11-24T17:59:54,836   reading manifest file 'chembl_structure_pipeline.egg-info/SOURCES.txt'
2025-11-24T17:59:54,838   adding license file 'LICENSE'
2025-11-24T17:59:54,841   writing manifest file 'chembl_structure_pipeline.egg-info/SOURCES.txt'
2025-11-24T17:59:54,842   Copying chembl_structure_pipeline.egg-info to build/bdist.linux-armv7l/wheel/./chembl_structure_pipeline-1.2.4-py3.11.egg-info
2025-11-24T17:59:54,853   running install_scripts
2025-11-24T17:59:54,864   creating build/bdist.linux-armv7l/wheel/chembl_structure_pipeline-1.2.4.dist-info/WHEEL
2025-11-24T17:59:54,866   creating '/tmp/pip-wheel-haepiv2m/chembl_structure_pipeline-1.2.4-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2025-11-24T17:59:54,869   adding 'chembl_structure_pipeline/__init__.py'
2025-11-24T17:59:54,871   adding 'chembl_structure_pipeline/checker.py'
2025-11-24T17:59:54,872   adding 'chembl_structure_pipeline/exclude_flag.py'
2025-11-24T17:59:54,875   adding 'chembl_structure_pipeline/standardizer.py'
2025-11-24T17:59:54,877   adding 'chembl_structure_pipeline/data/salts.smi'
2025-11-24T17:59:54,878   adding 'chembl_structure_pipeline/data/solvents.smi'
2025-11-24T17:59:54,881   adding 'chembl_structure_pipeline-1.2.4.dist-info/licenses/LICENSE'
2025-11-24T17:59:54,882   adding 'chembl_structure_pipeline-1.2.4.dist-info/METADATA'
2025-11-24T17:59:54,883   adding 'chembl_structure_pipeline-1.2.4.dist-info/WHEEL'
2025-11-24T17:59:54,884   adding 'chembl_structure_pipeline-1.2.4.dist-info/top_level.txt'
2025-11-24T17:59:54,885   adding 'chembl_structure_pipeline-1.2.4.dist-info/RECORD'
2025-11-24T17:59:54,886   removing build/bdist.linux-armv7l/wheel
2025-11-24T17:59:55,002   Building wheel for chembl-structure-pipeline (setup.py): finished with status 'done'
2025-11-24T17:59:55,005   Created wheel for chembl-structure-pipeline: filename=chembl_structure_pipeline-1.2.4-py3-none-any.whl size=17302 sha256=598353db1d00bc4575e1b9b123f1bef19091b1d853af91a07b3bf0ec608edb4c
2025-11-24T17:59:55,006   Stored in directory: /tmp/pip-ephem-wheel-cache-sdq5y5r7/wheels/e8/ff/c1/d40c294c834e75f44f7b81a621716f2a1a3176842c541436a1
2025-11-24T17:59:55,016 Successfully built chembl-structure-pipeline
2025-11-24T17:59:55,019 Removed build tracker: '/tmp/pip-build-tracker-f9l5_l2j'