2025-11-25T07:30:17,810 Created temporary directory: /tmp/pip-ephem-wheel-cache-_ezkfa4a 2025-11-25T07:30:17,811 Created temporary directory: /tmp/pip-build-tracker-wj43x56_ 2025-11-25T07:30:17,812 Initialized build tracking at /tmp/pip-build-tracker-wj43x56_ 2025-11-25T07:30:17,812 Created build tracker: /tmp/pip-build-tracker-wj43x56_ 2025-11-25T07:30:17,813 Entered build tracker: /tmp/pip-build-tracker-wj43x56_ 2025-11-25T07:30:17,814 Created temporary directory: /tmp/pip-wheel-f9ancc8f 2025-11-25T07:30:17,817 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2025-11-25T07:30:17,819 Created temporary directory: /tmp/pip-ephem-wheel-cache-_p6izfuj 2025-11-25T07:30:17,844 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-11-25T07:30:17,847 2 location(s) to search for versions of funvip: 2025-11-25T07:30:17,847 * https://pypi.org/simple/funvip/ 2025-11-25T07:30:17,847 * https://www.piwheels.org/simple/funvip/ 2025-11-25T07:30:17,848 Fetching project page and analyzing links: https://pypi.org/simple/funvip/ 2025-11-25T07:30:17,849 Getting page https://pypi.org/simple/funvip/ 2025-11-25T07:30:17,850 Found index url https://pypi.org/simple 2025-11-25T07:30:18,061 Fetched page https://pypi.org/simple/funvip/ as application/vnd.pypi.simple.v1+json 2025-11-25T07:30:18,073 Skipping link: No binaries permitted for funvip: https://files.pythonhosted.org/packages/a0/b5/0d65eb17b155c93a7022978aa4521fa29d234a099409863a5b08a8e7e122/FunVIP-0.3.20-py3-none-any.whl (from https://pypi.org/simple/funvip/) (requires-python:<3.13,>3.8) 2025-11-25T07:30:18,074 Found link https://files.pythonhosted.org/packages/9b/df/34c36f5642250c040b8ef6fd2f6c11699fe52dca76ef2697e566a4101185/funvip-0.3.20.tar.gz (from https://pypi.org/simple/funvip/) (requires-python:<3.13,>3.8), version: 0.3.20 2025-11-25T07:30:18,074 Skipping link: No binaries permitted for funvip: https://files.pythonhosted.org/packages/fe/66/8319c3a6cd421da1f2a7febf8bc5042089d0f7480d31d988b9dc02b348cc/FunVIP-0.3.21-py3-none-any.whl (from https://pypi.org/simple/funvip/) (requires-python:<3.13,>3.8) 2025-11-25T07:30:18,076 Found link https://files.pythonhosted.org/packages/15/a7/1458c95468d22392f0d1f5366422c5e3325b2b73fb00ead5645ce60aefd3/funvip-0.3.21.tar.gz (from https://pypi.org/simple/funvip/) (requires-python:<3.13,>3.8), version: 0.3.21 2025-11-25T07:30:18,076 Skipping link: No binaries permitted for funvip: https://files.pythonhosted.org/packages/09/25/d7edd31afd3b5a9c32fd19315aa55fe62eeedbb6ad8efd581f1197da518e/FunVIP-0.3.22-py3-none-any.whl (from https://pypi.org/simple/funvip/) (requires-python:<3.13,>3.8) 2025-11-25T07:30:18,077 Found link https://files.pythonhosted.org/packages/77/eb/6c02451b239042d60f03c7ed10e91d4c53c4e227d2eb1d49aa8b2246a973/funvip-0.3.22.tar.gz (from https://pypi.org/simple/funvip/) (requires-python:<3.13,>3.8), version: 0.3.22 2025-11-25T07:30:18,078 Skipping link: No binaries permitted for funvip: https://files.pythonhosted.org/packages/0b/b3/c6fe7d14fc8dd1ab7b79c3824e98b5ac7b9a6cc4dc3f5af5040acc7e6982/FunVIP-0.3.22.1-py3-none-any.whl (from https://pypi.org/simple/funvip/) (requires-python:<3.13,>3.8) 2025-11-25T07:30:18,079 Found link https://files.pythonhosted.org/packages/a4/d6/c50c9574e9a58a3b2fb79c9e42d1b46e11aab893e33372d4039e8111980b/funvip-0.3.22.1.tar.gz (from 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(requires-python:<=3.12,>=3.9) 2025-11-25T07:30:18,086 Found link https://files.pythonhosted.org/packages/f4/a2/b1fa48ba9dd5134a83ba1fc4eb2e88f11f20ab92c1b4bf9db4e45690d265/funvip-0.3.23.2.tar.gz (from https://pypi.org/simple/funvip/) (requires-python:<=3.12,>=3.9), version: 0.3.23.2 2025-11-25T07:30:18,087 Skipping link: No binaries permitted for funvip: https://files.pythonhosted.org/packages/49/81/37e5411ad9e5d545b28572d933c907be695b699d95c573bf615763ab6068/FunVIP-0.3.23.3-py3-none-any.whl (from https://pypi.org/simple/funvip/) (requires-python:<3.13,>=3.9) 2025-11-25T07:30:18,088 Found link https://files.pythonhosted.org/packages/3b/87/8cdea18d6973a290f3cd3cadd6c6be73e2dcfda742582a8360d2cbbd6b0b/funvip-0.3.23.3.tar.gz (from https://pypi.org/simple/funvip/) (requires-python:<3.13,>=3.9), version: 0.3.23.3 2025-11-25T07:30:18,089 Skipping link: No binaries permitted for funvip: https://files.pythonhosted.org/packages/49/a6/aac4d30e1bcbb416244376fc8a74e373e75e4389bc79280722296ed96f58/FunVIP-0.3.23.4-py3-none-any.whl (from https://pypi.org/simple/funvip/) (requires-python:<3.13,>=3.9) 2025-11-25T07:30:18,089 Found link https://files.pythonhosted.org/packages/e6/db/93f1b2143cd3d264770151476b343218d9c9ed3025007229d9df1cb51276/funvip-0.3.23.4.tar.gz (from https://pypi.org/simple/funvip/) (requires-python:<3.13,>=3.9), version: 0.3.23.4 2025-11-25T07:30:18,090 Skipping link: No binaries permitted for funvip: https://files.pythonhosted.org/packages/a7/0e/0557ac37749e20aec974134f812f620b56e10d7e292ec5cb421b10d2ef1e/FunVIP-0.3.23.5-py3-none-any.whl (from https://pypi.org/simple/funvip/) (requires-python:<3.13,>=3.9) 2025-11-25T07:30:18,091 Found link https://files.pythonhosted.org/packages/8a/cb/7047a64d7e847331c97fd999eb2cec4c9094eda84704b25cff0499273479/funvip-0.3.23.5.tar.gz (from https://pypi.org/simple/funvip/) (requires-python:<3.13,>=3.9), version: 0.3.23.5 2025-11-25T07:30:18,092 Skipping link: No binaries permitted for funvip: https://files.pythonhosted.org/packages/83/b5/ec4b79ad98377c37954a625450251ae36a556f63dfcf27d3a0191c44ed88/FunVIP-0.3.24-py3-none-any.whl (from https://pypi.org/simple/funvip/) (requires-python:<3.13,>=3.9) 2025-11-25T07:30:18,093 Found link https://files.pythonhosted.org/packages/6d/42/8fdfd4c3a39ff48eee164877f0d0c69d645fb6f9ada4d5187a34298205d0/funvip-0.3.24.tar.gz (from https://pypi.org/simple/funvip/) (requires-python:<3.13,>=3.9), version: 0.3.24 2025-11-25T07:30:18,094 Skipping link: No binaries permitted for funvip: https://files.pythonhosted.org/packages/72/3c/981fa7f40051f00d7c0277d89e4c3d1abf9e87f2f42fcc26d5dc480b7b56/FunVIP-0.3.24.1-py3-none-any.whl (from https://pypi.org/simple/funvip/) (requires-python:<3.13,>=3.9) 2025-11-25T07:30:18,095 Found link https://files.pythonhosted.org/packages/d4/36/20e99bb21f4d2c1a4d40b4047613eed02ffd4c5f8c42420f2e0c13667127/funvip-0.3.24.1.tar.gz (from 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https://files.pythonhosted.org/packages/62/e6/eb2e93b145a2a05eb85eb53d7adbb7b0bd90908cb67a13b873dbef54b063/funvip-0.3.24.3.tar.gz (from https://pypi.org/simple/funvip/) (requires-python:<3.13,>=3.9), version: 0.3.24.3 2025-11-25T07:30:18,099 Skipping link: No binaries permitted for funvip: https://files.pythonhosted.org/packages/d8/1c/738a91cb51359d95a355d5f014a16b201117b6eefb450f2f23cf9ebb5d62/FunVIP-0.3.24.4-py3-none-any.whl (from https://pypi.org/simple/funvip/) (requires-python:<3.13,>=3.9) 2025-11-25T07:30:18,100 Found link https://files.pythonhosted.org/packages/ba/99/ff687cd117d03fdfaf3cd532981cc67a674b6bf8161c243f7dbd995f5b0a/funvip-0.3.24.4.tar.gz (from https://pypi.org/simple/funvip/) (requires-python:<3.13,>=3.9), version: 0.3.24.4 2025-11-25T07:30:18,100 Skipping link: No binaries permitted for funvip: https://files.pythonhosted.org/packages/6c/24/d0bf7d4738a8e738695c0e3a6897849ade06d09704563ff1ea24df2e4ee0/FunVIP-0.3.24.5-py3-none-any.whl (from 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2025-11-25T07:30:18,107 Skipping link: No binaries permitted for funvip: https://files.pythonhosted.org/packages/42/e8/c46ba70c7a26090069ed6606968988ffc382da9e130ce9129e60fc5cb10a/FunVIP-0.4.0-py3-none-any.whl (from https://pypi.org/simple/funvip/) (requires-python:<3.13,>=3.9) 2025-11-25T07:30:18,108 Found link https://files.pythonhosted.org/packages/44/cb/787f3dbcc9e95130a99673e78289bf501d51c660032dc9c7417288659853/funvip-0.4.0.tar.gz (from https://pypi.org/simple/funvip/) (requires-python:<3.13,>=3.9), version: 0.4.0 2025-11-25T07:30:18,109 Skipping link: No binaries permitted for funvip: https://files.pythonhosted.org/packages/4b/ca/9c5adc6b77978311e35d777f954a70c3f862d33c4b85e4b8d7bd50d66dc3/FunVIP-0.4.1-py3-none-any.whl (from https://pypi.org/simple/funvip/) (requires-python:<3.13,>=3.9) 2025-11-25T07:30:18,110 Found link https://files.pythonhosted.org/packages/fd/ef/1777be83c991c38c61db34321d18118e985bda07666cbf59807b49426d2f/funvip-0.4.1.tar.gz (from 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(requires-python:<3.13,>=3.9) 2025-11-25T07:30:18,116 Found link https://files.pythonhosted.org/packages/9d/68/3080ef7da2b4080b05a19a1bd8609718cdaa51ddf74a6dcd438f2e0eb1b2/funvip-0.5.3.tar.gz (from https://pypi.org/simple/funvip/) (requires-python:<3.13,>=3.9), version: 0.5.3 2025-11-25T07:30:18,117 Skipping link: No binaries permitted for funvip: https://files.pythonhosted.org/packages/0c/68/6efefeed04479eafd132e5757a885496ed0f9b97dbcfcce5a48a7a293023/funvip-0.5.4-py3-none-any.whl (from https://pypi.org/simple/funvip/) (requires-python:<3.13,>=3.9) 2025-11-25T07:30:18,118 Found link https://files.pythonhosted.org/packages/c2/07/5782ce10c8de92daeaedc7219d82c1db2d5590f8e533449f56632a062934/funvip-0.5.4.tar.gz (from https://pypi.org/simple/funvip/) (requires-python:<3.13,>=3.9), version: 0.5.4 2025-11-25T07:30:18,119 Skipping link: No binaries permitted for funvip: https://files.pythonhosted.org/packages/54/51/caf80eb9b3a7c2b701c22334e50349ca18920f3f660c6ed4ea4f8ae75226/funvip-0.5.5-py3-none-any.whl (from https://pypi.org/simple/funvip/) (requires-python:<3.13,>=3.9) 2025-11-25T07:30:18,120 Found link https://files.pythonhosted.org/packages/4e/dd/a94970b83e09625bf1ffdbd941e097661ae79a5619559aa04c58c66b5ab0/funvip-0.5.5.tar.gz (from https://pypi.org/simple/funvip/) (requires-python:<3.13,>=3.9), version: 0.5.5 2025-11-25T07:30:18,121 Skipping link: No binaries permitted for funvip: https://files.pythonhosted.org/packages/20/ed/c8cbc3819439833e9b74345c4038fb62632798fab31524f9c06fcec26ef7/funvip-0.5.6-py3-none-any.whl (from https://pypi.org/simple/funvip/) (requires-python:<3.13,>=3.9) 2025-11-25T07:30:18,122 Found link https://files.pythonhosted.org/packages/43/84/c473d8f4d5b2ff6aea7d9aa1d729f475a7deffbace5fc930000415cafda5/funvip-0.5.6.tar.gz (from https://pypi.org/simple/funvip/) (requires-python:<3.13,>=3.9), version: 0.5.6 2025-11-25T07:30:18,122 Skipping link: No binaries permitted for funvip: https://files.pythonhosted.org/packages/29/00/8fc644555b38322d7b3a5ead27b4f49f234c4d358485a76330701cf8e9c1/funvip-0.5.7-py3-none-any.whl (from https://pypi.org/simple/funvip/) (requires-python:<3.13,>=3.9) 2025-11-25T07:30:18,123 Found link https://files.pythonhosted.org/packages/6e/68/8aea287548b6c03ef7c103cdde14def637af9ba762bc89ef3b50e60a6489/funvip-0.5.7.tar.gz (from https://pypi.org/simple/funvip/) (requires-python:<3.13,>=3.9), version: 0.5.7 2025-11-25T07:30:18,124 Fetching project page and analyzing links: https://www.piwheels.org/simple/funvip/ 2025-11-25T07:30:18,125 Getting page https://www.piwheels.org/simple/funvip/ 2025-11-25T07:30:18,126 Found index url https://www.piwheels.org/simple 2025-11-25T07:30:18,282 Fetched page https://www.piwheels.org/simple/funvip/ as text/html 2025-11-25T07:30:18,291 Skipping link: No binaries permitted for funvip: https://archive1.piwheels.org/simple/funvip/funvip-0.5.6-py3-none-any.whl#sha256=bf6bf179944d0a8b3468810567a54dd4d1def698ec3c55b274244d36eadd857b (from https://www.piwheels.org/simple/funvip/) (requires-python:<3.13,>=3.9) 2025-11-25T07:30:18,292 Skipping link: No binaries permitted for funvip: https://archive1.piwheels.org/simple/funvip/funvip-0.5.5-py3-none-any.whl#sha256=c19e8174c118fa57c0ef824407e98d305e08eba7dd492e1aad3f08450a6389b2 (from https://www.piwheels.org/simple/funvip/) (requires-python:<3.13,>=3.9) 2025-11-25T07:30:18,293 Skipping link: No binaries permitted for funvip: https://archive1.piwheels.org/simple/funvip/funvip-0.5.4-py3-none-any.whl#sha256=cd4fffdf3de15bbb7391a653ee39bbd9d6edd64bcc616152d0694c8e0f1b6aa2 (from https://www.piwheels.org/simple/funvip/) (requires-python:<3.13,>=3.9) 2025-11-25T07:30:18,293 Skipping link: No binaries permitted for funvip: https://archive1.piwheels.org/simple/funvip/funvip-0.5.3-py3-none-any.whl#sha256=dcbb1de26a061677cb2253e5d1d1e742397d2d970f1e8d48d6662b382efae6b7 (from https://www.piwheels.org/simple/funvip/) (requires-python:<3.13,>=3.9) 2025-11-25T07:30:18,294 Skipping link: No binaries permitted for funvip: https://archive1.piwheels.org/simple/funvip/funvip-0.5.2-py3-none-any.whl#sha256=67d018ab2648fe061950aaa7dd8ab9543e1bf43098a4a59c861789e7e579cc79 (from https://www.piwheels.org/simple/funvip/) (requires-python:<3.13,>=3.9) 2025-11-25T07:30:18,295 Skipping link: No binaries permitted for funvip: https://archive1.piwheels.org/simple/funvip/funvip-0.5.1-py3-none-any.whl#sha256=67626c52f075fe01fa8ff2d5b21ca5c796a6cd9a97279107807cd97868009917 (from https://www.piwheels.org/simple/funvip/) (requires-python:<3.13,>=3.9) 2025-11-25T07:30:18,295 Skipping link: No binaries permitted for funvip: https://archive1.piwheels.org/simple/funvip/funvip-0.5.0-py3-none-any.whl#sha256=ad2ff14daf5afc2447b90f082dfe4a5175f5ae4610503b97f766bc715cbeeed1 (from https://www.piwheels.org/simple/funvip/) (requires-python:<3.13,>=3.9) 2025-11-25T07:30:18,296 Skipping link: No binaries permitted for funvip: https://archive1.piwheels.org/simple/funvip/FunVIP-0.4.1-py3-none-any.whl#sha256=6c159dc3ea6004aeb5fdb189a252ce1d2e687c810d25c0dae84fad0e04bac6bf (from https://www.piwheels.org/simple/funvip/) (requires-python:<3.13,>=3.9) 2025-11-25T07:30:18,296 Skipping link: No binaries permitted for funvip: https://archive1.piwheels.org/simple/funvip/FunVIP-0.4.0-py3-none-any.whl#sha256=c0faa4d6680cf7ce9078d34e0468ceeafe02b2aa0aeaecd5bdd4761eee5560ce (from https://www.piwheels.org/simple/funvip/) (requires-python:<3.13,>=3.9) 2025-11-25T07:30:18,297 Skipping link: No binaries permitted for funvip: https://archive1.piwheels.org/simple/funvip/FunVIP-0.3.25-py3-none-any.whl#sha256=45bfdb69a63dc341fc9ca466e01bbf617f7abeb3d04ba12a7d55d5316047471e (from https://www.piwheels.org/simple/funvip/) (requires-python:<3.13,>=3.9) 2025-11-25T07:30:18,298 Skipping link: No binaries permitted for funvip: https://archive1.piwheels.org/simple/funvip/FunVIP-0.3.24.7-py3-none-any.whl#sha256=aca3401966898116bc6406a5535512e2ca04ca3d3f7ba1b7bdbf39fc3a470362 (from https://www.piwheels.org/simple/funvip/) (requires-python:<3.13,>=3.9) 2025-11-25T07:30:18,298 Skipping link: No binaries permitted for funvip: https://archive1.piwheels.org/simple/funvip/FunVIP-0.3.24.6-py3-none-any.whl#sha256=b8c91ddaded689e43b9ef0eeb8ba9e1749d2b79217a6959ff881fab18f9eb1d6 (from https://www.piwheels.org/simple/funvip/) (requires-python:<3.13,>=3.9) 2025-11-25T07:30:18,299 Skipping link: No binaries permitted for funvip: https://archive1.piwheels.org/simple/funvip/FunVIP-0.3.24.5-py3-none-any.whl#sha256=dd0c08377d09ff183423eca560eefbee819dee0c400350f398c23c6218488a4f (from https://www.piwheels.org/simple/funvip/) (requires-python:<3.13,>=3.9) 2025-11-25T07:30:18,299 Skipping link: No binaries permitted for funvip: https://archive1.piwheels.org/simple/funvip/FunVIP-0.3.24.4-py3-none-any.whl#sha256=172ad07f4c491cc21550610c362ecf09b49607340f80c4875a884064443048e2 (from https://www.piwheels.org/simple/funvip/) (requires-python:<3.13,>=3.9) 2025-11-25T07:30:18,300 Skipping link: No binaries permitted for funvip: https://archive1.piwheels.org/simple/funvip/FunVIP-0.3.24.3-py3-none-any.whl#sha256=34552cd8ff6ac3ef0ee87d70444cafea4124ba7d881d1e2759e20e346691427f (from https://www.piwheels.org/simple/funvip/) (requires-python:<3.13,>=3.9) 2025-11-25T07:30:18,300 Skipping link: No binaries permitted for funvip: https://archive1.piwheels.org/simple/funvip/FunVIP-0.3.24.2-py3-none-any.whl#sha256=12c7bcfe0420665cd9a164b437e1523cba59b0e36d14a0cf8fc677e42a8933b7 (from https://www.piwheels.org/simple/funvip/) (requires-python:<3.13,>=3.9) 2025-11-25T07:30:18,301 Skipping link: No binaries permitted for funvip: https://archive1.piwheels.org/simple/funvip/FunVIP-0.3.24.1-py3-none-any.whl#sha256=a43a614f738922f29db19b37f7d0b6e4b04646d071f0795f8c1903f971da5203 (from https://www.piwheels.org/simple/funvip/) (requires-python:<3.13,>=3.9) 2025-11-25T07:30:18,302 Skipping link: No binaries permitted for funvip: https://archive1.piwheels.org/simple/funvip/FunVIP-0.3.24-py3-none-any.whl#sha256=198d588e878ee253a645522e745f987d7ee50d5a90213749dc4cecabdfbc42d4 (from https://www.piwheels.org/simple/funvip/) (requires-python:<3.13,>=3.9) 2025-11-25T07:30:18,302 Skipping link: No binaries permitted for funvip: https://archive1.piwheels.org/simple/funvip/FunVIP-0.3.23.5-py3-none-any.whl#sha256=33673acc9b771482b6148e4cefb57f8e9cbbac4fb0a493b9fac45057ff8efbd6 (from https://www.piwheels.org/simple/funvip/) (requires-python:<3.13,>=3.9) 2025-11-25T07:30:18,303 Skipping link: No binaries permitted for funvip: https://archive1.piwheels.org/simple/funvip/FunVIP-0.3.23.4-py3-none-any.whl#sha256=2f2d89759ff39efb73edea85c63a04abad68dd52d38dedddcea533bd5e5e4f3f (from https://www.piwheels.org/simple/funvip/) (requires-python:<3.13,>=3.9) 2025-11-25T07:30:18,304 Skipping link: No binaries permitted for funvip: https://archive1.piwheels.org/simple/funvip/FunVIP-0.3.23.3-py3-none-any.whl#sha256=d292b5c91dd1c1a0af45542946c5c19fdaa8d7860bfd5f5dc15c04a6d3731d1b (from https://www.piwheels.org/simple/funvip/) (requires-python:<3.13,>=3.9) 2025-11-25T07:30:18,304 Skipping link: No binaries permitted for funvip: https://archive1.piwheels.org/simple/funvip/FunVIP-0.3.23.2-py3-none-any.whl#sha256=bd61f13c7948f5191cf1a16802785377206d6bcf532e582d67d1f773ab2f9765 (from https://www.piwheels.org/simple/funvip/) (requires-python:<=3.12,>=3.9) 2025-11-25T07:30:18,305 Skipping link: No binaries permitted for funvip: https://archive1.piwheels.org/simple/funvip/FunVIP-0.3.23.1-py3-none-any.whl#sha256=f69e1c7bc13cc0f43effc7502586a00813341329ecb72958ea4aee5b5b9c7a03 (from https://www.piwheels.org/simple/funvip/) (requires-python:<3.13,>3.8) 2025-11-25T07:30:18,306 Skipping link: No binaries permitted for funvip: https://archive1.piwheels.org/simple/funvip/FunVIP-0.3.23-py3-none-any.whl#sha256=f853a145c71e289d7f3e06b321116cdccf421469a1e9942b6c447fe7daa20a44 (from https://www.piwheels.org/simple/funvip/) (requires-python:<3.13,>3.8) 2025-11-25T07:30:18,306 Skipping link: No binaries permitted for funvip: https://archive1.piwheels.org/simple/funvip/FunVIP-0.3.22.2-py3-none-any.whl#sha256=8c5e476d94a5e4d4150a89c277d7da56ad82f28db2654cc57194f8614fa8a73c (from https://www.piwheels.org/simple/funvip/) (requires-python:<3.13,>3.8) 2025-11-25T07:30:18,306 Skipping link: No binaries permitted for funvip: https://archive1.piwheels.org/simple/funvip/FunVIP-0.3.22.1-py3-none-any.whl#sha256=6464c8044637848420c9213e543ed7b9357ce36d794c79a28b76c20cdb04226f (from https://www.piwheels.org/simple/funvip/) (requires-python:<3.13,>3.8) 2025-11-25T07:30:18,307 Skipping link: No binaries permitted for funvip: https://archive1.piwheels.org/simple/funvip/FunVIP-0.3.22-py3-none-any.whl#sha256=dd2db50f85481b3ce82217522dd0cf0afb20263cc65856f59e25fce5d1ce09d1 (from https://www.piwheels.org/simple/funvip/) (requires-python:<3.13,>3.8) 2025-11-25T07:30:18,307 Skipping link: No binaries permitted for funvip: https://archive1.piwheels.org/simple/funvip/FunVIP-0.3.21-py3-none-any.whl#sha256=e1863d6683eb41c991cce86262ef477d12ad652320dfb6fa0f5b9d184d7c42c6 (from https://www.piwheels.org/simple/funvip/) (requires-python:<3.13,>3.8) 2025-11-25T07:30:18,308 Skipping link: No binaries permitted for funvip: https://archive1.piwheels.org/simple/funvip/FunVIP-0.3.20-py3-none-any.whl#sha256=c93795ba7644b586c23cea4f5a6c421915b36ff5f5be700ee1a37d7857f03e3b (from https://www.piwheels.org/simple/funvip/) (requires-python:<3.13,>3.8) 2025-11-25T07:30:18,308 Skipping link: not a file: https://www.piwheels.org/simple/funvip/ 2025-11-25T07:30:18,309 Skipping link: not a file: https://pypi.org/simple/funvip/ 2025-11-25T07:30:18,332 Given no hashes to check 1 links for project 'funvip': discarding no candidates 2025-11-25T07:30:18,350 Collecting funvip==0.5.7 2025-11-25T07:30:18,352 Created temporary directory: /tmp/pip-unpack-tbycfgux 2025-11-25T07:30:18,570 Downloading funvip-0.5.7.tar.gz (64.2 MB) 2025-11-25T07:30:31,637 Added funvip==0.5.7 from https://files.pythonhosted.org/packages/6e/68/8aea287548b6c03ef7c103cdde14def637af9ba762bc89ef3b50e60a6489/funvip-0.5.7.tar.gz to build tracker '/tmp/pip-build-tracker-wj43x56_' 2025-11-25T07:30:31,644 Created temporary directory: /tmp/pip-build-env-hhzi5z6e 2025-11-25T07:30:31,649 Installing build dependencies: started 2025-11-25T07:30:31,651 Running command pip subprocess to install build dependencies 2025-11-25T07:30:32,784 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2025-11-25T07:30:33,436 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2025-11-25T07:30:33,459 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-11-25T07:30:35,172 Collecting setuptools 2025-11-25T07:30:35,277 Using cached https://www.piwheels.org/simple/setuptools/setuptools-80.9.0-py3-none-any.whl (1.2 MB) 2025-11-25T07:30:35,489 Collecting setuptools-ext 2025-11-25T07:30:35,771 Downloading https://archive1.piwheels.org/simple/setuptools-ext/setuptools_ext-0.9-py3-none-any.whl (7.2 kB) 2025-11-25T07:30:36,003 Collecting wheel 2025-11-25T07:30:36,018 Using cached https://www.piwheels.org/simple/wheel/wheel-0.45.1-py3-none-any.whl (72 kB) 2025-11-25T07:30:39,162 Installing collected packages: wheel, setuptools, setuptools-ext 2025-11-25T07:30:39,392 Creating /tmp/pip-build-env-hhzi5z6e/overlay/local/bin 2025-11-25T07:30:39,395 changing mode of /tmp/pip-build-env-hhzi5z6e/overlay/local/bin/wheel to 755 2025-11-25T07:30:43,036 Successfully installed setuptools-80.9.0 setuptools-ext-0.9 wheel-0.45.1 2025-11-25T07:30:43,312 Installing build dependencies: finished with status 'done' 2025-11-25T07:30:43,319 Getting requirements to build wheel: started 2025-11-25T07:30:43,320 Running command Getting requirements to build wheel 2025-11-25T07:30:43,943 /tmp/pip-build-env-hhzi5z6e/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2025-11-25T07:30:43,943 !! 2025-11-25T07:30:43,944 ******************************************************************************** 2025-11-25T07:30:43,944 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2025-11-25T07:30:43,945 By 2026-Feb-18, you need to update your project and remove deprecated calls 2025-11-25T07:30:43,946 or your builds will no longer be supported. 2025-11-25T07:30:43,947 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-11-25T07:30:43,947 ******************************************************************************** 2025-11-25T07:30:43,948 !! 2025-11-25T07:30:43,949 corresp(dist, value, root_dir) 2025-11-25T07:30:44,040 running egg_info 2025-11-25T07:30:44,047 writing FunVIP.egg-info/PKG-INFO 2025-11-25T07:30:44,051 writing dependency_links to FunVIP.egg-info/dependency_links.txt 2025-11-25T07:30:44,053 writing entry points to FunVIP.egg-info/entry_points.txt 2025-11-25T07:30:44,056 writing requirements to FunVIP.egg-info/requires.txt 2025-11-25T07:30:44,057 writing top-level names to FunVIP.egg-info/top_level.txt 2025-11-25T07:30:44,204 reading manifest file 'FunVIP.egg-info/SOURCES.txt' 2025-11-25T07:30:44,227 reading manifest template 'MANIFEST.in' 2025-11-25T07:30:44,319 adding license file 'LICENSE' 2025-11-25T07:30:44,332 writing manifest file 'FunVIP.egg-info/SOURCES.txt' 2025-11-25T07:30:44,430 Getting requirements to build wheel: finished with status 'done' 2025-11-25T07:30:44,434 Created temporary directory: /tmp/pip-modern-metadata-dr701v7y 2025-11-25T07:30:44,436 Preparing metadata (pyproject.toml): started 2025-11-25T07:30:44,438 Running command Preparing metadata (pyproject.toml) 2025-11-25T07:30:45,019 /tmp/pip-build-env-hhzi5z6e/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2025-11-25T07:30:45,020 !! 2025-11-25T07:30:45,021 ******************************************************************************** 2025-11-25T07:30:45,021 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2025-11-25T07:30:45,022 By 2026-Feb-18, you need to update your project and remove deprecated calls 2025-11-25T07:30:45,023 or your builds will no longer be supported. 2025-11-25T07:30:45,024 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-11-25T07:30:45,025 ******************************************************************************** 2025-11-25T07:30:45,026 !! 2025-11-25T07:30:45,026 corresp(dist, value, root_dir) 2025-11-25T07:30:45,113 running dist_info 2025-11-25T07:30:45,125 creating /tmp/pip-modern-metadata-dr701v7y/FunVIP.egg-info 2025-11-25T07:30:45,126 writing /tmp/pip-modern-metadata-dr701v7y/FunVIP.egg-info/PKG-INFO 2025-11-25T07:30:45,131 writing dependency_links to /tmp/pip-modern-metadata-dr701v7y/FunVIP.egg-info/dependency_links.txt 2025-11-25T07:30:45,132 writing entry points to /tmp/pip-modern-metadata-dr701v7y/FunVIP.egg-info/entry_points.txt 2025-11-25T07:30:45,135 writing requirements to /tmp/pip-modern-metadata-dr701v7y/FunVIP.egg-info/requires.txt 2025-11-25T07:30:45,136 writing top-level names to /tmp/pip-modern-metadata-dr701v7y/FunVIP.egg-info/top_level.txt 2025-11-25T07:30:45,137 writing manifest file '/tmp/pip-modern-metadata-dr701v7y/FunVIP.egg-info/SOURCES.txt' 2025-11-25T07:30:45,167 reading manifest file '/tmp/pip-modern-metadata-dr701v7y/FunVIP.egg-info/SOURCES.txt' 2025-11-25T07:30:45,169 reading manifest template 'MANIFEST.in' 2025-11-25T07:30:45,258 adding license file 'LICENSE' 2025-11-25T07:30:45,268 writing manifest file '/tmp/pip-modern-metadata-dr701v7y/FunVIP.egg-info/SOURCES.txt' 2025-11-25T07:30:45,269 creating '/tmp/pip-modern-metadata-dr701v7y/funvip-0.5.7.dist-info' 2025-11-25T07:30:45,396 Preparing metadata (pyproject.toml): finished with status 'done' 2025-11-25T07:30:45,401 Source in /tmp/pip-wheel-f9ancc8f/funvip_dcb80839d90944beaa9fb9890aecd178 has version 0.5.7, which satisfies requirement funvip==0.5.7 from https://files.pythonhosted.org/packages/6e/68/8aea287548b6c03ef7c103cdde14def637af9ba762bc89ef3b50e60a6489/funvip-0.5.7.tar.gz 2025-11-25T07:30:45,402 Removed funvip==0.5.7 from https://files.pythonhosted.org/packages/6e/68/8aea287548b6c03ef7c103cdde14def637af9ba762bc89ef3b50e60a6489/funvip-0.5.7.tar.gz from build tracker '/tmp/pip-build-tracker-wj43x56_' 2025-11-25T07:30:45,408 Created temporary directory: /tmp/pip-unpack-7hnvu6gd 2025-11-25T07:30:45,409 Building wheels for collected packages: funvip 2025-11-25T07:30:45,413 Created temporary directory: /tmp/pip-wheel-25gnqcve 2025-11-25T07:30:45,413 Destination directory: /tmp/pip-wheel-25gnqcve 2025-11-25T07:30:45,416 Building wheel for funvip (pyproject.toml): started 2025-11-25T07:30:45,417 Running command Building wheel for funvip (pyproject.toml) 2025-11-25T07:30:45,981 /tmp/pip-build-env-hhzi5z6e/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2025-11-25T07:30:45,981 !! 2025-11-25T07:30:45,982 ******************************************************************************** 2025-11-25T07:30:45,983 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2025-11-25T07:30:45,984 By 2026-Feb-18, you need to update your project and remove deprecated calls 2025-11-25T07:30:45,985 or your builds will no longer be supported. 2025-11-25T07:30:45,986 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-11-25T07:30:45,986 ******************************************************************************** 2025-11-25T07:30:45,987 !! 2025-11-25T07:30:45,988 corresp(dist, value, root_dir) 2025-11-25T07:30:46,061 running bdist_wheel 2025-11-25T07:30:46,082 running build 2025-11-25T07:30:46,083 running build_py 2025-11-25T07:30:46,089 creating build/lib/funvip 2025-11-25T07:30:46,092 copying funvip/FunVIP_GUI.py -> build/lib/funvip 2025-11-25T07:30:46,095 copying funvip/main.py -> build/lib/funvip 2025-11-25T07:30:46,097 copying funvip/__init__.py -> build/lib/funvip 2025-11-25T07:30:46,099 creating build/lib/funvip/data 2025-11-25T07:30:46,100 copying funvip/data/__init__.py -> build/lib/funvip/data 2025-11-25T07:30:46,103 creating build/lib/funvip/external 2025-11-25T07:30:46,104 copying funvip/external/__init__.py -> build/lib/funvip/external 2025-11-25T07:30:46,107 creating build/lib/funvip/src 2025-11-25T07:30:46,108 copying funvip/src/trim.py -> build/lib/funvip/src 2025-11-25T07:30:46,111 copying funvip/src/cluster.py -> build/lib/funvip/src 2025-11-25T07:30:46,114 copying funvip/src/save.py -> build/lib/funvip/src 2025-11-25T07:30:46,116 copying funvip/src/concatenate.py -> build/lib/funvip/src 2025-11-25T07:30:46,118 copying funvip/src/tree.py -> build/lib/funvip/src 2025-11-25T07:30:46,120 copying funvip/src/tree_interpretation.py -> build/lib/funvip/src 2025-11-25T07:30:46,125 copying funvip/src/opt_generator.py -> build/lib/funvip/src 2025-11-25T07:30:46,127 copying funvip/src/align.py -> build/lib/funvip/src 2025-11-25T07:30:46,129 copying funvip/src/validate_input.py -> build/lib/funvip/src 2025-11-25T07:30:46,133 copying funvip/src/logger.py -> build/lib/funvip/src 2025-11-25T07:30:46,135 copying funvip/src/ncbi.py -> build/lib/funvip/src 2025-11-25T07:30:46,137 copying funvip/src/logics.py -> build/lib/funvip/src 2025-11-25T07:30:46,139 copying funvip/src/tool.py -> build/lib/funvip/src 2025-11-25T07:30:46,141 copying funvip/src/modeltest.py -> build/lib/funvip/src 2025-11-25T07:30:46,144 copying funvip/src/command.py -> build/lib/funvip/src 2025-11-25T07:30:46,146 copying funvip/src/tree_interpretation_pipe.py -> build/lib/funvip/src 2025-11-25T07:30:46,149 copying funvip/src/search.py -> build/lib/funvip/src 2025-11-25T07:30:46,152 copying funvip/src/validate_option.py -> build/lib/funvip/src 2025-11-25T07:30:46,155 copying funvip/src/dataset.py -> build/lib/funvip/src 2025-11-25T07:30:46,158 copying funvip/src/visualize.py -> build/lib/funvip/src 2025-11-25T07:30:46,160 copying funvip/src/ext.py -> build/lib/funvip/src 2025-11-25T07:30:46,163 copying funvip/src/initialize.py -> build/lib/funvip/src 2025-11-25T07:30:46,166 copying funvip/src/__init__.py -> build/lib/funvip/src 2025-11-25T07:30:46,167 copying funvip/src/reporter.py -> build/lib/funvip/src 2025-11-25T07:30:46,170 copying funvip/src/validation.py -> build/lib/funvip/src 2025-11-25T07:30:46,172 copying funvip/src/version.py -> build/lib/funvip/src 2025-11-25T07:30:46,174 copying funvip/src/hasher.py -> build/lib/funvip/src 2025-11-25T07:30:46,177 running egg_info 2025-11-25T07:30:46,188 writing FunVIP.egg-info/PKG-INFO 2025-11-25T07:30:46,192 writing dependency_links to FunVIP.egg-info/dependency_links.txt 2025-11-25T07:30:46,193 writing entry points to FunVIP.egg-info/entry_points.txt 2025-11-25T07:30:46,195 writing requirements to FunVIP.egg-info/requires.txt 2025-11-25T07:30:46,197 writing top-level names to FunVIP.egg-info/top_level.txt 2025-11-25T07:30:46,215 reading manifest file 'FunVIP.egg-info/SOURCES.txt' 2025-11-25T07:30:46,228 reading manifest template 'MANIFEST.in' 2025-11-25T07:30:46,317 adding license file 'LICENSE' 2025-11-25T07:30:46,329 writing manifest file 'FunVIP.egg-info/SOURCES.txt' 2025-11-25T07:30:46,332 /tmp/pip-build-env-hhzi5z6e/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'funvip.external.BLAST_Windows' is absent from the `packages` configuration. 2025-11-25T07:30:46,332 !! 2025-11-25T07:30:46,333 ******************************************************************************** 2025-11-25T07:30:46,334 ############################ 2025-11-25T07:30:46,334 # Package would be ignored # 2025-11-25T07:30:46,335 ############################ 2025-11-25T07:30:46,336 Python recognizes 'funvip.external.BLAST_Windows' as an importable package[^1], 2025-11-25T07:30:46,336 but it is absent from setuptools' `packages` configuration. 2025-11-25T07:30:46,337 This leads to an ambiguous overall configuration. If you want to distribute this 2025-11-25T07:30:46,338 package, please make sure that 'funvip.external.BLAST_Windows' is explicitly added 2025-11-25T07:30:46,339 to the `packages` configuration field. 2025-11-25T07:30:46,340 Alternatively, you can also rely on setuptools' discovery methods 2025-11-25T07:30:46,341 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-11-25T07:30:46,341 instead of `find_packages(...)`/`find:`). 2025-11-25T07:30:46,343 You can read more about "package discovery" on setuptools documentation page: 2025-11-25T07:30:46,343 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-11-25T07:30:46,344 If you don't want 'funvip.external.BLAST_Windows' to be distributed and are 2025-11-25T07:30:46,345 already explicitly excluding 'funvip.external.BLAST_Windows' via 2025-11-25T07:30:46,345 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-11-25T07:30:46,345 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-11-25T07:30:46,346 combination with a more fine grained `package-data` configuration. 2025-11-25T07:30:46,347 You can read more about "package data files" on setuptools documentation page: 2025-11-25T07:30:46,348 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-11-25T07:30:46,349 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-11-25T07:30:46,349 even if it does not contain any `.py` files. 2025-11-25T07:30:46,350 On the other hand, currently there is no concept of package data 2025-11-25T07:30:46,350 directory, all directories are treated like packages. 2025-11-25T07:30:46,350 ******************************************************************************** 2025-11-25T07:30:46,351 !! 2025-11-25T07:30:46,352 check.warn(importable) 2025-11-25T07:30:46,352 /tmp/pip-build-env-hhzi5z6e/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'funvip.external.BLAST_Windows.bin' is absent from the `packages` configuration. 2025-11-25T07:30:46,353 !! 2025-11-25T07:30:46,354 ******************************************************************************** 2025-11-25T07:30:46,355 ############################ 2025-11-25T07:30:46,355 # Package would be ignored # 2025-11-25T07:30:46,356 ############################ 2025-11-25T07:30:46,357 Python recognizes 'funvip.external.BLAST_Windows.bin' as an importable package[^1], 2025-11-25T07:30:46,357 but it is absent from setuptools' `packages` configuration. 2025-11-25T07:30:46,359 This leads to an ambiguous overall configuration. If you want to distribute this 2025-11-25T07:30:46,359 package, please make sure that 'funvip.external.BLAST_Windows.bin' is explicitly added 2025-11-25T07:30:46,360 to the `packages` configuration field. 2025-11-25T07:30:46,361 Alternatively, you can also rely on setuptools' discovery methods 2025-11-25T07:30:46,362 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-11-25T07:30:46,362 instead of `find_packages(...)`/`find:`). 2025-11-25T07:30:46,363 You can read more about "package discovery" on setuptools documentation page: 2025-11-25T07:30:46,364 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-11-25T07:30:46,365 If you don't want 'funvip.external.BLAST_Windows.bin' to be distributed and are 2025-11-25T07:30:46,365 already explicitly excluding 'funvip.external.BLAST_Windows.bin' via 2025-11-25T07:30:46,366 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-11-25T07:30:46,366 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-11-25T07:30:46,367 combination with a more fine grained `package-data` configuration. 2025-11-25T07:30:46,368 You can read more about "package data files" on setuptools documentation page: 2025-11-25T07:30:46,369 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-11-25T07:30:46,371 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-11-25T07:30:46,371 even if it does not contain any `.py` files. 2025-11-25T07:30:46,372 On the other hand, currently there is no concept of package data 2025-11-25T07:30:46,372 directory, all directories are treated like packages. 2025-11-25T07:30:46,373 ******************************************************************************** 2025-11-25T07:30:46,373 !! 2025-11-25T07:30:46,374 check.warn(importable) 2025-11-25T07:30:46,374 /tmp/pip-build-env-hhzi5z6e/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'funvip.external.BLAST_Windows.doc' is absent from the `packages` configuration. 2025-11-25T07:30:46,374 !! 2025-11-25T07:30:46,375 ******************************************************************************** 2025-11-25T07:30:46,376 ############################ 2025-11-25T07:30:46,376 # Package would be ignored # 2025-11-25T07:30:46,376 ############################ 2025-11-25T07:30:46,377 Python recognizes 'funvip.external.BLAST_Windows.doc' as an importable package[^1], 2025-11-25T07:30:46,377 but it is absent from setuptools' `packages` configuration. 2025-11-25T07:30:46,378 This leads to an ambiguous overall configuration. If you want to distribute this 2025-11-25T07:30:46,378 package, please make sure that 'funvip.external.BLAST_Windows.doc' is explicitly added 2025-11-25T07:30:46,379 to the `packages` configuration field. 2025-11-25T07:30:46,379 Alternatively, you can also rely on setuptools' discovery methods 2025-11-25T07:30:46,380 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-11-25T07:30:46,380 instead of `find_packages(...)`/`find:`). 2025-11-25T07:30:46,382 You can read more about "package discovery" on setuptools documentation page: 2025-11-25T07:30:46,383 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-11-25T07:30:46,384 If you don't want 'funvip.external.BLAST_Windows.doc' to be distributed and are 2025-11-25T07:30:46,384 already explicitly excluding 'funvip.external.BLAST_Windows.doc' via 2025-11-25T07:30:46,385 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-11-25T07:30:46,386 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-11-25T07:30:46,386 combination with a more fine grained `package-data` configuration. 2025-11-25T07:30:46,387 You can read more about "package data files" on setuptools documentation page: 2025-11-25T07:30:46,388 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-11-25T07:30:46,390 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-11-25T07:30:46,390 even if it does not contain any `.py` files. 2025-11-25T07:30:46,391 On the other hand, currently there is no concept of package data 2025-11-25T07:30:46,391 directory, all directories are treated like packages. 2025-11-25T07:30:46,391 ******************************************************************************** 2025-11-25T07:30:46,392 !! 2025-11-25T07:30:46,393 check.warn(importable) 2025-11-25T07:30:46,393 /tmp/pip-build-env-hhzi5z6e/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'funvip.external.FastTree_Windows' is absent from the `packages` configuration. 2025-11-25T07:30:46,394 !! 2025-11-25T07:30:46,395 ******************************************************************************** 2025-11-25T07:30:46,395 ############################ 2025-11-25T07:30:46,396 # Package would be ignored # 2025-11-25T07:30:46,396 ############################ 2025-11-25T07:30:46,397 Python recognizes 'funvip.external.FastTree_Windows' as an importable package[^1], 2025-11-25T07:30:46,397 but it is absent from setuptools' `packages` configuration. 2025-11-25T07:30:46,398 This leads to an ambiguous overall configuration. If you want to distribute this 2025-11-25T07:30:46,399 package, please make sure that 'funvip.external.FastTree_Windows' is explicitly added 2025-11-25T07:30:46,399 to the `packages` configuration field. 2025-11-25T07:30:46,400 Alternatively, you can also rely on setuptools' discovery methods 2025-11-25T07:30:46,400 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-11-25T07:30:46,400 instead of `find_packages(...)`/`find:`). 2025-11-25T07:30:46,401 You can read more about "package discovery" on setuptools documentation page: 2025-11-25T07:30:46,402 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-11-25T07:30:46,402 If you don't want 'funvip.external.FastTree_Windows' to be distributed and are 2025-11-25T07:30:46,403 already explicitly excluding 'funvip.external.FastTree_Windows' via 2025-11-25T07:30:46,403 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-11-25T07:30:46,403 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-11-25T07:30:46,404 combination with a more fine grained `package-data` configuration. 2025-11-25T07:30:46,404 You can read more about "package data files" on setuptools documentation page: 2025-11-25T07:30:46,405 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-11-25T07:30:46,407 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-11-25T07:30:46,407 even if it does not contain any `.py` files. 2025-11-25T07:30:46,408 On the other hand, currently there is no concept of package data 2025-11-25T07:30:46,408 directory, all directories are treated like packages. 2025-11-25T07:30:46,409 ******************************************************************************** 2025-11-25T07:30:46,410 !! 2025-11-25T07:30:46,410 check.warn(importable) 2025-11-25T07:30:46,411 /tmp/pip-build-env-hhzi5z6e/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'funvip.external.RAxML_Windows' is absent from the `packages` configuration. 2025-11-25T07:30:46,411 !! 2025-11-25T07:30:46,412 ******************************************************************************** 2025-11-25T07:30:46,413 ############################ 2025-11-25T07:30:46,414 # Package would be ignored # 2025-11-25T07:30:46,414 ############################ 2025-11-25T07:30:46,415 Python recognizes 'funvip.external.RAxML_Windows' as an importable package[^1], 2025-11-25T07:30:46,415 but it is absent from setuptools' `packages` configuration. 2025-11-25T07:30:46,416 This leads to an ambiguous overall configuration. If you want to distribute this 2025-11-25T07:30:46,416 package, please make sure that 'funvip.external.RAxML_Windows' is explicitly added 2025-11-25T07:30:46,417 to the `packages` configuration field. 2025-11-25T07:30:46,418 Alternatively, you can also rely on setuptools' discovery methods 2025-11-25T07:30:46,418 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-11-25T07:30:46,419 instead of `find_packages(...)`/`find:`). 2025-11-25T07:30:46,420 You can read more about "package discovery" on setuptools documentation page: 2025-11-25T07:30:46,421 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-11-25T07:30:46,422 If you don't want 'funvip.external.RAxML_Windows' to be distributed and are 2025-11-25T07:30:46,422 already explicitly excluding 'funvip.external.RAxML_Windows' via 2025-11-25T07:30:46,423 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-11-25T07:30:46,424 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-11-25T07:30:46,424 combination with a more fine grained `package-data` configuration. 2025-11-25T07:30:46,425 You can read more about "package data files" on setuptools documentation page: 2025-11-25T07:30:46,425 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-11-25T07:30:46,426 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-11-25T07:30:46,427 even if it does not contain any `.py` files. 2025-11-25T07:30:46,427 On the other hand, currently there is no concept of package data 2025-11-25T07:30:46,428 directory, all directories are treated like packages. 2025-11-25T07:30:46,428 ******************************************************************************** 2025-11-25T07:30:46,429 !! 2025-11-25T07:30:46,430 check.warn(importable) 2025-11-25T07:30:46,430 /tmp/pip-build-env-hhzi5z6e/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'funvip.external.iqtree' is absent from the `packages` configuration. 2025-11-25T07:30:46,430 !! 2025-11-25T07:30:46,431 ******************************************************************************** 2025-11-25T07:30:46,432 ############################ 2025-11-25T07:30:46,432 # Package would be ignored # 2025-11-25T07:30:46,433 ############################ 2025-11-25T07:30:46,433 Python recognizes 'funvip.external.iqtree' as an importable package[^1], 2025-11-25T07:30:46,433 but it is absent from setuptools' `packages` configuration. 2025-11-25T07:30:46,434 This leads to an ambiguous overall configuration. If you want to distribute this 2025-11-25T07:30:46,435 package, please make sure that 'funvip.external.iqtree' is explicitly added 2025-11-25T07:30:46,436 to the `packages` configuration field. 2025-11-25T07:30:46,437 Alternatively, you can also rely on setuptools' discovery methods 2025-11-25T07:30:46,437 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-11-25T07:30:46,438 instead of `find_packages(...)`/`find:`). 2025-11-25T07:30:46,439 You can read more about "package discovery" on setuptools documentation page: 2025-11-25T07:30:46,440 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-11-25T07:30:46,441 If you don't want 'funvip.external.iqtree' to be distributed and are 2025-11-25T07:30:46,442 already explicitly excluding 'funvip.external.iqtree' via 2025-11-25T07:30:46,443 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-11-25T07:30:46,443 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-11-25T07:30:46,444 combination with a more fine grained `package-data` configuration. 2025-11-25T07:30:46,445 You can read more about "package data files" on setuptools documentation page: 2025-11-25T07:30:46,446 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-11-25T07:30:46,447 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-11-25T07:30:46,448 even if it does not contain any `.py` files. 2025-11-25T07:30:46,449 On the other hand, currently there is no concept of package data 2025-11-25T07:30:46,449 directory, all directories are treated like packages. 2025-11-25T07:30:46,450 ******************************************************************************** 2025-11-25T07:30:46,451 !! 2025-11-25T07:30:46,452 check.warn(importable) 2025-11-25T07:30:46,453 /tmp/pip-build-env-hhzi5z6e/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'funvip.external.iqtree.bin' is absent from the `packages` configuration. 2025-11-25T07:30:46,453 !! 2025-11-25T07:30:46,454 ******************************************************************************** 2025-11-25T07:30:46,455 ############################ 2025-11-25T07:30:46,455 # Package would be ignored # 2025-11-25T07:30:46,456 ############################ 2025-11-25T07:30:46,456 Python recognizes 'funvip.external.iqtree.bin' as an importable package[^1], 2025-11-25T07:30:46,457 but it is absent from setuptools' `packages` configuration. 2025-11-25T07:30:46,457 This leads to an ambiguous overall configuration. If you want to distribute this 2025-11-25T07:30:46,458 package, please make sure that 'funvip.external.iqtree.bin' is explicitly added 2025-11-25T07:30:46,458 to the `packages` configuration field. 2025-11-25T07:30:46,459 Alternatively, you can also rely on setuptools' discovery methods 2025-11-25T07:30:46,460 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-11-25T07:30:46,460 instead of `find_packages(...)`/`find:`). 2025-11-25T07:30:46,461 You can read more about "package discovery" on setuptools documentation page: 2025-11-25T07:30:46,462 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-11-25T07:30:46,463 If you don't want 'funvip.external.iqtree.bin' to be distributed and are 2025-11-25T07:30:46,463 already explicitly excluding 'funvip.external.iqtree.bin' via 2025-11-25T07:30:46,464 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-11-25T07:30:46,464 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-11-25T07:30:46,465 combination with a more fine grained `package-data` configuration. 2025-11-25T07:30:46,466 You can read more about "package data files" on setuptools documentation page: 2025-11-25T07:30:46,468 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-11-25T07:30:46,470 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-11-25T07:30:46,470 even if it does not contain any `.py` files. 2025-11-25T07:30:46,471 On the other hand, currently there is no concept of package data 2025-11-25T07:30:46,471 directory, all directories are treated like packages. 2025-11-25T07:30:46,472 ******************************************************************************** 2025-11-25T07:30:46,473 !! 2025-11-25T07:30:46,474 check.warn(importable) 2025-11-25T07:30:46,475 /tmp/pip-build-env-hhzi5z6e/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'funvip.external.mmseqs_Windows' is absent from the `packages` configuration. 2025-11-25T07:30:46,475 !! 2025-11-25T07:30:46,476 ******************************************************************************** 2025-11-25T07:30:46,477 ############################ 2025-11-25T07:30:46,477 # Package would be ignored # 2025-11-25T07:30:46,478 ############################ 2025-11-25T07:30:46,479 Python recognizes 'funvip.external.mmseqs_Windows' as an importable package[^1], 2025-11-25T07:30:46,479 but it is absent from setuptools' `packages` configuration. 2025-11-25T07:30:46,480 This leads to an ambiguous overall configuration. If you want to distribute this 2025-11-25T07:30:46,481 package, please make sure that 'funvip.external.mmseqs_Windows' is explicitly added 2025-11-25T07:30:46,481 to the `packages` configuration field. 2025-11-25T07:30:46,483 Alternatively, you can also rely on setuptools' discovery methods 2025-11-25T07:30:46,483 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-11-25T07:30:46,484 instead of `find_packages(...)`/`find:`). 2025-11-25T07:30:46,485 You can read more about "package discovery" on setuptools documentation page: 2025-11-25T07:30:46,486 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-11-25T07:30:46,487 If you don't want 'funvip.external.mmseqs_Windows' to be distributed and are 2025-11-25T07:30:46,488 already explicitly excluding 'funvip.external.mmseqs_Windows' via 2025-11-25T07:30:46,488 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-11-25T07:30:46,488 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-11-25T07:30:46,489 combination with a more fine grained `package-data` configuration. 2025-11-25T07:30:46,490 You can read more about "package data files" on setuptools documentation page: 2025-11-25T07:30:46,491 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-11-25T07:30:46,492 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-11-25T07:30:46,493 even if it does not contain any `.py` files. 2025-11-25T07:30:46,493 On the other hand, currently there is no concept of package data 2025-11-25T07:30:46,493 directory, all directories are treated like packages. 2025-11-25T07:30:46,494 ******************************************************************************** 2025-11-25T07:30:46,495 !! 2025-11-25T07:30:46,495 check.warn(importable) 2025-11-25T07:30:46,496 /tmp/pip-build-env-hhzi5z6e/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'funvip.external.mmseqs_Windows.bin' is absent from the `packages` configuration. 2025-11-25T07:30:46,496 !! 2025-11-25T07:30:46,497 ******************************************************************************** 2025-11-25T07:30:46,498 ############################ 2025-11-25T07:30:46,499 # Package would be ignored # 2025-11-25T07:30:46,499 ############################ 2025-11-25T07:30:46,500 Python recognizes 'funvip.external.mmseqs_Windows.bin' as an importable package[^1], 2025-11-25T07:30:46,501 but it is absent from setuptools' `packages` configuration. 2025-11-25T07:30:46,502 This leads to an ambiguous overall configuration. If you want to distribute this 2025-11-25T07:30:46,503 package, please make sure that 'funvip.external.mmseqs_Windows.bin' is explicitly added 2025-11-25T07:30:46,504 to the `packages` configuration field. 2025-11-25T07:30:46,505 Alternatively, you can also rely on setuptools' discovery methods 2025-11-25T07:30:46,505 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-11-25T07:30:46,506 instead of `find_packages(...)`/`find:`). 2025-11-25T07:30:46,507 You can read more about "package discovery" on setuptools documentation page: 2025-11-25T07:30:46,508 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-11-25T07:30:46,509 If you don't want 'funvip.external.mmseqs_Windows.bin' to be distributed and are 2025-11-25T07:30:46,510 already explicitly excluding 'funvip.external.mmseqs_Windows.bin' via 2025-11-25T07:30:46,511 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-11-25T07:30:46,511 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-11-25T07:30:46,512 combination with a more fine grained `package-data` configuration. 2025-11-25T07:30:46,513 You can read more about "package data files" on setuptools documentation page: 2025-11-25T07:30:46,514 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-11-25T07:30:46,516 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-11-25T07:30:46,517 even if it does not contain any `.py` files. 2025-11-25T07:30:46,518 On the other hand, currently there is no concept of package data 2025-11-25T07:30:46,519 directory, all directories are treated like packages. 2025-11-25T07:30:46,519 ******************************************************************************** 2025-11-25T07:30:46,520 !! 2025-11-25T07:30:46,520 check.warn(importable) 2025-11-25T07:30:46,521 /tmp/pip-build-env-hhzi5z6e/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'funvip.external.mmseqs_Windows.examples' is absent from the `packages` configuration. 2025-11-25T07:30:46,521 !! 2025-11-25T07:30:46,522 ******************************************************************************** 2025-11-25T07:30:46,522 ############################ 2025-11-25T07:30:46,523 # Package would be ignored # 2025-11-25T07:30:46,523 ############################ 2025-11-25T07:30:46,524 Python recognizes 'funvip.external.mmseqs_Windows.examples' as an importable package[^1], 2025-11-25T07:30:46,524 but it is absent from setuptools' `packages` configuration. 2025-11-25T07:30:46,525 This leads to an ambiguous overall configuration. If you want to distribute this 2025-11-25T07:30:46,526 package, please make sure that 'funvip.external.mmseqs_Windows.examples' is explicitly added 2025-11-25T07:30:46,526 to the `packages` configuration field. 2025-11-25T07:30:46,527 Alternatively, you can also rely on setuptools' discovery methods 2025-11-25T07:30:46,528 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-11-25T07:30:46,528 instead of `find_packages(...)`/`find:`). 2025-11-25T07:30:46,529 You can read more about "package discovery" on setuptools documentation page: 2025-11-25T07:30:46,531 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-11-25T07:30:46,532 If you don't want 'funvip.external.mmseqs_Windows.examples' to be distributed and are 2025-11-25T07:30:46,533 already explicitly excluding 'funvip.external.mmseqs_Windows.examples' via 2025-11-25T07:30:46,533 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-11-25T07:30:46,534 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-11-25T07:30:46,535 combination with a more fine grained `package-data` configuration. 2025-11-25T07:30:46,536 You can read more about "package data files" on setuptools documentation page: 2025-11-25T07:30:46,537 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-11-25T07:30:46,539 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-11-25T07:30:46,540 even if it does not contain any `.py` files. 2025-11-25T07:30:46,540 On the other hand, currently there is no concept of package data 2025-11-25T07:30:46,541 directory, all directories are treated like packages. 2025-11-25T07:30:46,541 ******************************************************************************** 2025-11-25T07:30:46,543 !! 2025-11-25T07:30:46,543 check.warn(importable) 2025-11-25T07:30:46,544 /tmp/pip-build-env-hhzi5z6e/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'funvip.external.mmseqs_Windows.matrices' is absent from the `packages` configuration. 2025-11-25T07:30:46,544 !! 2025-11-25T07:30:46,546 ******************************************************************************** 2025-11-25T07:30:46,546 ############################ 2025-11-25T07:30:46,547 # Package would be ignored # 2025-11-25T07:30:46,548 ############################ 2025-11-25T07:30:46,548 Python recognizes 'funvip.external.mmseqs_Windows.matrices' as an importable package[^1], 2025-11-25T07:30:46,549 but it is absent from setuptools' `packages` configuration. 2025-11-25T07:30:46,550 This leads to an ambiguous overall configuration. If you want to distribute this 2025-11-25T07:30:46,551 package, please make sure that 'funvip.external.mmseqs_Windows.matrices' is explicitly added 2025-11-25T07:30:46,551 to the `packages` configuration field. 2025-11-25T07:30:46,552 Alternatively, you can also rely on setuptools' discovery methods 2025-11-25T07:30:46,552 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-11-25T07:30:46,553 instead of `find_packages(...)`/`find:`). 2025-11-25T07:30:46,554 You can read more about "package discovery" on setuptools documentation page: 2025-11-25T07:30:46,555 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-11-25T07:30:46,556 If you don't want 'funvip.external.mmseqs_Windows.matrices' to be distributed and are 2025-11-25T07:30:46,556 already explicitly excluding 'funvip.external.mmseqs_Windows.matrices' via 2025-11-25T07:30:46,557 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-11-25T07:30:46,557 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-11-25T07:30:46,557 combination with a more fine grained `package-data` configuration. 2025-11-25T07:30:46,558 You can read more about "package data files" on setuptools documentation page: 2025-11-25T07:30:46,559 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-11-25T07:30:46,561 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-11-25T07:30:46,561 even if it does not contain any `.py` files. 2025-11-25T07:30:46,562 On the other hand, currently there is no concept of package data 2025-11-25T07:30:46,563 directory, all directories are treated like packages. 2025-11-25T07:30:46,563 ******************************************************************************** 2025-11-25T07:30:46,565 !! 2025-11-25T07:30:46,565 check.warn(importable) 2025-11-25T07:30:46,566 /tmp/pip-build-env-hhzi5z6e/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'funvip.external.mmseqs_Windows.util' is absent from the `packages` configuration. 2025-11-25T07:30:46,567 !! 2025-11-25T07:30:46,568 ******************************************************************************** 2025-11-25T07:30:46,569 ############################ 2025-11-25T07:30:46,569 # Package would be ignored # 2025-11-25T07:30:46,570 ############################ 2025-11-25T07:30:46,571 Python recognizes 'funvip.external.mmseqs_Windows.util' as an importable package[^1], 2025-11-25T07:30:46,571 but it is absent from setuptools' `packages` configuration. 2025-11-25T07:30:46,572 This leads to an ambiguous overall configuration. If you want to distribute this 2025-11-25T07:30:46,573 package, please make sure that 'funvip.external.mmseqs_Windows.util' is explicitly added 2025-11-25T07:30:46,574 to the `packages` configuration field. 2025-11-25T07:30:46,603 Alternatively, you can also rely on setuptools' discovery methods 2025-11-25T07:30:46,630 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-11-25T07:30:46,676 instead of `find_packages(...)`/`find:`). 2025-11-25T07:30:46,828 You can read more about "package discovery" on setuptools documentation page: 2025-11-25T07:30:46,842 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-11-25T07:30:46,843 If you don't want 'funvip.external.mmseqs_Windows.util' to be distributed and are 2025-11-25T07:30:46,844 already explicitly excluding 'funvip.external.mmseqs_Windows.util' via 2025-11-25T07:30:46,844 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-11-25T07:30:46,845 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-11-25T07:30:46,846 combination with a more fine grained `package-data` configuration. 2025-11-25T07:30:46,846 You can read more about "package data files" on setuptools documentation page: 2025-11-25T07:30:46,847 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-11-25T07:30:46,848 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-11-25T07:30:46,848 even if it does not contain any `.py` files. 2025-11-25T07:30:46,849 On the other hand, currently there is no concept of package data 2025-11-25T07:30:46,849 directory, all directories are treated like packages. 2025-11-25T07:30:46,849 ******************************************************************************** 2025-11-25T07:30:46,850 !! 2025-11-25T07:30:46,850 check.warn(importable) 2025-11-25T07:30:46,851 /tmp/pip-build-env-hhzi5z6e/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'funvip.src.__pycache__' is absent from the `packages` configuration. 2025-11-25T07:30:46,851 !! 2025-11-25T07:30:46,852 ******************************************************************************** 2025-11-25T07:30:46,852 ############################ 2025-11-25T07:30:46,853 # Package would be ignored # 2025-11-25T07:30:46,867 ############################ 2025-11-25T07:30:46,894 Python recognizes 'funvip.src.__pycache__' as an importable package[^1], 2025-11-25T07:30:46,912 but it is absent from setuptools' `packages` configuration. 2025-11-25T07:30:46,963 This leads to an ambiguous overall configuration. If you want to distribute this 2025-11-25T07:30:47,011 package, please make sure that 'funvip.src.__pycache__' is explicitly added 2025-11-25T07:30:47,075 to the `packages` configuration field. 2025-11-25T07:30:47,111 Alternatively, you can also rely on setuptools' discovery methods 2025-11-25T07:30:47,111 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-11-25T07:30:47,113 instead of `find_packages(...)`/`find:`). 2025-11-25T07:30:47,114 You can read more about "package discovery" on setuptools documentation page: 2025-11-25T07:30:47,115 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-11-25T07:30:47,116 If you don't want 'funvip.src.__pycache__' to be distributed and are 2025-11-25T07:30:47,117 already explicitly excluding 'funvip.src.__pycache__' via 2025-11-25T07:30:47,117 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-11-25T07:30:47,118 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-11-25T07:30:47,118 combination with a more fine grained `package-data` configuration. 2025-11-25T07:30:47,119 You can read more about "package data files" on setuptools documentation page: 2025-11-25T07:30:47,120 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-11-25T07:30:47,121 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-11-25T07:30:47,122 even if it does not contain any `.py` files. 2025-11-25T07:30:47,122 On the other hand, currently there is no concept of package data 2025-11-25T07:30:47,123 directory, all directories are treated like packages. 2025-11-25T07:30:47,123 ******************************************************************************** 2025-11-25T07:30:47,125 !! 2025-11-25T07:30:47,126 check.warn(importable) 2025-11-25T07:30:47,126 /tmp/pip-build-env-hhzi5z6e/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'funvip.src.templates' is absent from the `packages` configuration. 2025-11-25T07:30:47,139 !! 2025-11-25T07:30:47,143 ******************************************************************************** 2025-11-25T07:30:47,147 ############################ 2025-11-25T07:30:47,149 # Package would be ignored # 2025-11-25T07:30:47,170 ############################ 2025-11-25T07:30:47,176 Python recognizes 'funvip.src.templates' as an importable package[^1], 2025-11-25T07:30:47,211 but it is absent from setuptools' `packages` configuration. 2025-11-25T07:30:47,323 This leads to an ambiguous overall configuration. If you want to distribute this 2025-11-25T07:30:47,387 package, please make sure that 'funvip.src.templates' is explicitly added 2025-11-25T07:30:47,396 to the `packages` configuration field. 2025-11-25T07:30:47,397 Alternatively, you can also rely on setuptools' discovery methods 2025-11-25T07:30:47,398 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-11-25T07:30:47,398 instead of `find_packages(...)`/`find:`). 2025-11-25T07:30:47,399 You can read more about "package discovery" on setuptools documentation page: 2025-11-25T07:30:47,400 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-11-25T07:30:47,400 If you don't want 'funvip.src.templates' to be distributed and are 2025-11-25T07:30:47,401 already explicitly excluding 'funvip.src.templates' via 2025-11-25T07:30:47,401 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-11-25T07:30:47,402 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-11-25T07:30:47,402 combination with a more fine grained `package-data` configuration. 2025-11-25T07:30:47,404 You can read more about "package data files" on setuptools documentation page: 2025-11-25T07:30:47,405 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-11-25T07:30:47,407 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-11-25T07:30:47,407 even if it does not contain any `.py` files. 2025-11-25T07:30:47,408 On the other hand, currently there is no concept of package data 2025-11-25T07:30:47,422 directory, all directories are treated like packages. 2025-11-25T07:30:47,432 ******************************************************************************** 2025-11-25T07:30:47,489 !! 2025-11-25T07:30:47,490 check.warn(importable) 2025-11-25T07:30:47,490 /tmp/pip-build-env-hhzi5z6e/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'funvip.test_dataset.penicillium' is absent from the `packages` configuration. 2025-11-25T07:30:47,491 !! 2025-11-25T07:30:47,492 ******************************************************************************** 2025-11-25T07:30:47,492 ############################ 2025-11-25T07:30:47,493 # Package would be ignored # 2025-11-25T07:30:47,494 ############################ 2025-11-25T07:30:47,494 Python recognizes 'funvip.test_dataset.penicillium' as an importable package[^1], 2025-11-25T07:30:47,495 but it is absent from setuptools' `packages` configuration. 2025-11-25T07:30:47,497 This leads to an ambiguous overall configuration. If you want to distribute this 2025-11-25T07:30:47,497 package, please make sure that 'funvip.test_dataset.penicillium' is explicitly added 2025-11-25T07:30:47,498 to the `packages` configuration field. 2025-11-25T07:30:47,500 Alternatively, you can also rely on setuptools' discovery methods 2025-11-25T07:30:47,500 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-11-25T07:30:47,501 instead of `find_packages(...)`/`find:`). 2025-11-25T07:30:47,502 You can read more about "package discovery" on setuptools documentation page: 2025-11-25T07:30:47,504 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-11-25T07:30:47,505 If you don't want 'funvip.test_dataset.penicillium' to be distributed and are 2025-11-25T07:30:47,506 already explicitly excluding 'funvip.test_dataset.penicillium' via 2025-11-25T07:30:47,506 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-11-25T07:30:47,506 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-11-25T07:30:47,507 combination with a more fine grained `package-data` configuration. 2025-11-25T07:30:47,508 You can read more about "package data files" on setuptools documentation page: 2025-11-25T07:30:47,508 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-11-25T07:30:47,510 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-11-25T07:30:47,510 even if it does not contain any `.py` files. 2025-11-25T07:30:47,511 On the other hand, currently there is no concept of package data 2025-11-25T07:30:47,511 directory, all directories are treated like packages. 2025-11-25T07:30:47,511 ******************************************************************************** 2025-11-25T07:30:47,512 !! 2025-11-25T07:30:47,513 check.warn(importable) 2025-11-25T07:30:47,513 /tmp/pip-build-env-hhzi5z6e/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'funvip.test_dataset.penicillium.DB' is absent from the `packages` configuration. 2025-11-25T07:30:47,514 !! 2025-11-25T07:30:47,515 ******************************************************************************** 2025-11-25T07:30:47,515 ############################ 2025-11-25T07:30:47,516 # Package would be ignored # 2025-11-25T07:30:47,516 ############################ 2025-11-25T07:30:47,517 Python recognizes 'funvip.test_dataset.penicillium.DB' as an importable package[^1], 2025-11-25T07:30:47,517 but it is absent from setuptools' `packages` configuration. 2025-11-25T07:30:47,518 This leads to an ambiguous overall configuration. If you want to distribute this 2025-11-25T07:30:47,518 package, please make sure that 'funvip.test_dataset.penicillium.DB' is explicitly added 2025-11-25T07:30:47,519 to the `packages` configuration field. 2025-11-25T07:30:47,520 Alternatively, you can also rely on setuptools' discovery methods 2025-11-25T07:30:47,521 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-11-25T07:30:47,521 instead of `find_packages(...)`/`find:`). 2025-11-25T07:30:47,522 You can read more about "package discovery" on setuptools documentation page: 2025-11-25T07:30:47,523 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-11-25T07:30:47,524 If you don't want 'funvip.test_dataset.penicillium.DB' to be distributed and are 2025-11-25T07:30:47,524 already explicitly excluding 'funvip.test_dataset.penicillium.DB' via 2025-11-25T07:30:47,525 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-11-25T07:30:47,525 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-11-25T07:30:47,526 combination with a more fine grained `package-data` configuration. 2025-11-25T07:30:47,527 You can read more about "package data files" on setuptools documentation page: 2025-11-25T07:30:47,528 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-11-25T07:30:47,529 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-11-25T07:30:47,530 even if it does not contain any `.py` files. 2025-11-25T07:30:47,530 On the other hand, currently there is no concept of package data 2025-11-25T07:30:47,533 directory, all directories are treated like packages. 2025-11-25T07:30:47,534 ******************************************************************************** 2025-11-25T07:30:47,536 !! 2025-11-25T07:30:47,537 check.warn(importable) 2025-11-25T07:30:47,538 /tmp/pip-build-env-hhzi5z6e/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'funvip.test_dataset.penicillium.Query' is absent from the `packages` configuration. 2025-11-25T07:30:47,539 !! 2025-11-25T07:30:47,540 ******************************************************************************** 2025-11-25T07:30:47,541 ############################ 2025-11-25T07:30:47,542 # Package would be ignored # 2025-11-25T07:30:47,542 ############################ 2025-11-25T07:30:47,543 Python recognizes 'funvip.test_dataset.penicillium.Query' as an importable package[^1], 2025-11-25T07:30:47,543 but it is absent from setuptools' `packages` configuration. 2025-11-25T07:30:47,544 This leads to an ambiguous overall configuration. If you want to distribute this 2025-11-25T07:30:47,546 package, please make sure that 'funvip.test_dataset.penicillium.Query' is explicitly added 2025-11-25T07:30:47,547 to the `packages` configuration field. 2025-11-25T07:30:47,548 Alternatively, you can also rely on setuptools' discovery methods 2025-11-25T07:30:47,548 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-11-25T07:30:47,548 instead of `find_packages(...)`/`find:`). 2025-11-25T07:30:47,549 You can read more about "package discovery" on setuptools documentation page: 2025-11-25T07:30:47,550 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-11-25T07:30:47,551 If you don't want 'funvip.test_dataset.penicillium.Query' to be distributed and are 2025-11-25T07:30:47,552 already explicitly excluding 'funvip.test_dataset.penicillium.Query' via 2025-11-25T07:30:47,552 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-11-25T07:30:47,553 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-11-25T07:30:47,553 combination with a more fine grained `package-data` configuration. 2025-11-25T07:30:47,554 You can read more about "package data files" on setuptools documentation page: 2025-11-25T07:30:47,555 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-11-25T07:30:47,557 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-11-25T07:30:47,557 even if it does not contain any `.py` files. 2025-11-25T07:30:47,558 On the other hand, currently there is no concept of package data 2025-11-25T07:30:47,558 directory, all directories are treated like packages. 2025-11-25T07:30:47,559 ******************************************************************************** 2025-11-25T07:30:47,560 !! 2025-11-25T07:30:47,560 check.warn(importable) 2025-11-25T07:30:47,561 /tmp/pip-build-env-hhzi5z6e/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'funvip.test_dataset.sanghuangporus' is absent from the `packages` configuration. 2025-11-25T07:30:47,561 !! 2025-11-25T07:30:47,562 ******************************************************************************** 2025-11-25T07:30:47,563 ############################ 2025-11-25T07:30:47,563 # Package would be ignored # 2025-11-25T07:30:47,564 ############################ 2025-11-25T07:30:47,564 Python recognizes 'funvip.test_dataset.sanghuangporus' as an importable package[^1], 2025-11-25T07:30:47,565 but it is absent from setuptools' `packages` configuration. 2025-11-25T07:30:47,566 This leads to an ambiguous overall configuration. If you want to distribute this 2025-11-25T07:30:47,566 package, please make sure that 'funvip.test_dataset.sanghuangporus' is explicitly added 2025-11-25T07:30:47,567 to the `packages` configuration field. 2025-11-25T07:30:47,568 Alternatively, you can also rely on setuptools' discovery methods 2025-11-25T07:30:47,568 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-11-25T07:30:47,569 instead of `find_packages(...)`/`find:`). 2025-11-25T07:30:47,569 You can read more about "package discovery" on setuptools documentation page: 2025-11-25T07:30:47,570 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-11-25T07:30:47,571 If you don't want 'funvip.test_dataset.sanghuangporus' to be distributed and are 2025-11-25T07:30:47,572 already explicitly excluding 'funvip.test_dataset.sanghuangporus' via 2025-11-25T07:30:47,572 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-11-25T07:30:47,573 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-11-25T07:30:47,573 combination with a more fine grained `package-data` configuration. 2025-11-25T07:30:47,574 You can read more about "package data files" on setuptools documentation page: 2025-11-25T07:30:47,575 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-11-25T07:30:47,577 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-11-25T07:30:47,578 even if it does not contain any `.py` files. 2025-11-25T07:30:47,579 On the other hand, currently there is no concept of package data 2025-11-25T07:30:47,581 directory, all directories are treated like packages. 2025-11-25T07:30:47,595 ******************************************************************************** 2025-11-25T07:30:47,651 !! 2025-11-25T07:30:47,659 check.warn(importable) 2025-11-25T07:30:47,659 /tmp/pip-build-env-hhzi5z6e/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'funvip.test_dataset.sanghuangporus.DB' is absent from the `packages` configuration. 2025-11-25T07:30:47,660 !! 2025-11-25T07:30:47,661 ******************************************************************************** 2025-11-25T07:30:47,661 ############################ 2025-11-25T07:30:47,662 # Package would be ignored # 2025-11-25T07:30:47,663 ############################ 2025-11-25T07:30:47,663 Python recognizes 'funvip.test_dataset.sanghuangporus.DB' as an importable package[^1], 2025-11-25T07:30:47,664 but it is absent from setuptools' `packages` configuration. 2025-11-25T07:30:47,665 This leads to an ambiguous overall configuration. If you want to distribute this 2025-11-25T07:30:47,666 package, please make sure that 'funvip.test_dataset.sanghuangporus.DB' is explicitly added 2025-11-25T07:30:47,666 to the `packages` configuration field. 2025-11-25T07:30:47,668 Alternatively, you can also rely on setuptools' discovery methods 2025-11-25T07:30:47,668 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-11-25T07:30:47,669 instead of `find_packages(...)`/`find:`). 2025-11-25T07:30:47,670 You can read more about "package discovery" on setuptools documentation page: 2025-11-25T07:30:47,671 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-11-25T07:30:47,672 If you don't want 'funvip.test_dataset.sanghuangporus.DB' to be distributed and are 2025-11-25T07:30:47,673 already explicitly excluding 'funvip.test_dataset.sanghuangporus.DB' via 2025-11-25T07:30:47,674 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-11-25T07:30:47,674 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-11-25T07:30:47,675 combination with a more fine grained `package-data` configuration. 2025-11-25T07:30:47,676 You can read more about "package data files" on setuptools documentation page: 2025-11-25T07:30:47,677 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-11-25T07:30:47,678 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-11-25T07:30:47,679 even if it does not contain any `.py` files. 2025-11-25T07:30:47,679 On the other hand, currently there is no concept of package data 2025-11-25T07:30:47,679 directory, all directories are treated like packages. 2025-11-25T07:30:47,680 ******************************************************************************** 2025-11-25T07:30:47,681 !! 2025-11-25T07:30:47,681 check.warn(importable) 2025-11-25T07:30:47,682 /tmp/pip-build-env-hhzi5z6e/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'funvip.test_dataset.sanghuangporus.Query' is absent from the `packages` configuration. 2025-11-25T07:30:47,682 !! 2025-11-25T07:30:47,683 ******************************************************************************** 2025-11-25T07:30:47,684 ############################ 2025-11-25T07:30:47,684 # Package would be ignored # 2025-11-25T07:30:47,685 ############################ 2025-11-25T07:30:47,685 Python recognizes 'funvip.test_dataset.sanghuangporus.Query' as an importable package[^1], 2025-11-25T07:30:47,686 but it is absent from setuptools' `packages` configuration. 2025-11-25T07:30:47,687 This leads to an ambiguous overall configuration. If you want to distribute this 2025-11-25T07:30:47,687 package, please make sure that 'funvip.test_dataset.sanghuangporus.Query' is explicitly added 2025-11-25T07:30:47,688 to the `packages` configuration field. 2025-11-25T07:30:47,689 Alternatively, you can also rely on setuptools' discovery methods 2025-11-25T07:30:47,690 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-11-25T07:30:47,690 instead of `find_packages(...)`/`find:`). 2025-11-25T07:30:47,692 You can read more about "package discovery" on setuptools documentation page: 2025-11-25T07:30:47,693 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-11-25T07:30:47,694 If you don't want 'funvip.test_dataset.sanghuangporus.Query' to be distributed and are 2025-11-25T07:30:47,695 already explicitly excluding 'funvip.test_dataset.sanghuangporus.Query' via 2025-11-25T07:30:47,696 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-11-25T07:30:47,697 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-11-25T07:30:47,697 combination with a more fine grained `package-data` configuration. 2025-11-25T07:30:47,698 You can read more about "package data files" on setuptools documentation page: 2025-11-25T07:30:47,700 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-11-25T07:30:47,701 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-11-25T07:30:47,702 even if it does not contain any `.py` files. 2025-11-25T07:30:47,702 On the other hand, currently there is no concept of package data 2025-11-25T07:30:47,703 directory, all directories are treated like packages. 2025-11-25T07:30:47,704 ******************************************************************************** 2025-11-25T07:30:47,705 !! 2025-11-25T07:30:47,706 check.warn(importable) 2025-11-25T07:30:47,707 /tmp/pip-build-env-hhzi5z6e/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'funvip.test_dataset.terrei' is absent from the `packages` configuration. 2025-11-25T07:30:47,707 !! 2025-11-25T07:30:47,709 ******************************************************************************** 2025-11-25T07:30:47,709 ############################ 2025-11-25T07:30:47,710 # Package would be ignored # 2025-11-25T07:30:47,710 ############################ 2025-11-25T07:30:47,711 Python recognizes 'funvip.test_dataset.terrei' as an importable package[^1], 2025-11-25T07:30:47,711 but it is absent from setuptools' `packages` configuration. 2025-11-25T07:30:47,712 This leads to an ambiguous overall configuration. If you want to distribute this 2025-11-25T07:30:47,713 package, please make sure that 'funvip.test_dataset.terrei' is explicitly added 2025-11-25T07:30:47,713 to the `packages` configuration field. 2025-11-25T07:30:47,714 Alternatively, you can also rely on setuptools' discovery methods 2025-11-25T07:30:47,714 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-11-25T07:30:47,715 instead of `find_packages(...)`/`find:`). 2025-11-25T07:30:47,716 You can read more about "package discovery" on setuptools documentation page: 2025-11-25T07:30:47,717 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-11-25T07:30:47,718 If you don't want 'funvip.test_dataset.terrei' to be distributed and are 2025-11-25T07:30:47,718 already explicitly excluding 'funvip.test_dataset.terrei' via 2025-11-25T07:30:47,719 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-11-25T07:30:47,720 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-11-25T07:30:47,720 combination with a more fine grained `package-data` configuration. 2025-11-25T07:30:47,721 You can read more about "package data files" on setuptools documentation page: 2025-11-25T07:30:47,722 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-11-25T07:30:47,724 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-11-25T07:30:47,725 even if it does not contain any `.py` files. 2025-11-25T07:30:47,725 On the other hand, currently there is no concept of package data 2025-11-25T07:30:47,726 directory, all directories are treated like packages. 2025-11-25T07:30:47,726 ******************************************************************************** 2025-11-25T07:30:47,728 !! 2025-11-25T07:30:47,728 check.warn(importable) 2025-11-25T07:30:47,729 /tmp/pip-build-env-hhzi5z6e/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'funvip.test_dataset.terrei.DB' is absent from the `packages` configuration. 2025-11-25T07:30:47,729 !! 2025-11-25T07:30:47,731 ******************************************************************************** 2025-11-25T07:30:47,731 ############################ 2025-11-25T07:30:47,732 # Package would be ignored # 2025-11-25T07:30:47,732 ############################ 2025-11-25T07:30:47,733 Python recognizes 'funvip.test_dataset.terrei.DB' as an importable package[^1], 2025-11-25T07:30:47,733 but it is absent from setuptools' `packages` configuration. 2025-11-25T07:30:47,735 This leads to an ambiguous overall configuration. If you want to distribute this 2025-11-25T07:30:47,735 package, please make sure that 'funvip.test_dataset.terrei.DB' is explicitly added 2025-11-25T07:30:47,736 to the `packages` configuration field. 2025-11-25T07:30:47,737 Alternatively, you can also rely on setuptools' discovery methods 2025-11-25T07:30:47,738 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-11-25T07:30:47,739 instead of `find_packages(...)`/`find:`). 2025-11-25T07:30:47,740 You can read more about "package discovery" on setuptools documentation page: 2025-11-25T07:30:47,741 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-11-25T07:30:47,742 If you don't want 'funvip.test_dataset.terrei.DB' to be distributed and are 2025-11-25T07:30:47,742 already explicitly excluding 'funvip.test_dataset.terrei.DB' via 2025-11-25T07:30:47,743 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-11-25T07:30:47,743 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-11-25T07:30:47,744 combination with a more fine grained `package-data` configuration. 2025-11-25T07:30:47,745 You can read more about "package data files" on setuptools documentation page: 2025-11-25T07:30:47,746 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-11-25T07:30:47,747 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-11-25T07:30:47,748 even if it does not contain any `.py` files. 2025-11-25T07:30:47,748 On the other hand, currently there is no concept of package data 2025-11-25T07:30:47,749 directory, all directories are treated like packages. 2025-11-25T07:30:47,749 ******************************************************************************** 2025-11-25T07:30:47,765 !! 2025-11-25T07:30:47,818 check.warn(importable) 2025-11-25T07:30:47,875 /tmp/pip-build-env-hhzi5z6e/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'funvip.test_dataset.terrei.Query' is absent from the `packages` configuration. 2025-11-25T07:30:47,899 !! 2025-11-25T07:30:47,908 ******************************************************************************** 2025-11-25T07:30:47,941 ############################ 2025-11-25T07:30:47,956 # Package would be ignored # 2025-11-25T07:30:47,956 ############################ 2025-11-25T07:30:47,957 Python recognizes 'funvip.test_dataset.terrei.Query' as an importable package[^1], 2025-11-25T07:30:47,957 but it is absent from setuptools' `packages` configuration. 2025-11-25T07:30:47,958 This leads to an ambiguous overall configuration. If you want to distribute this 2025-11-25T07:30:47,959 package, please make sure that 'funvip.test_dataset.terrei.Query' is explicitly added 2025-11-25T07:30:47,960 to the `packages` configuration field. 2025-11-25T07:30:47,961 Alternatively, you can also rely on setuptools' discovery methods 2025-11-25T07:30:47,961 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-11-25T07:30:47,962 instead of `find_packages(...)`/`find:`). 2025-11-25T07:30:47,963 You can read more about "package discovery" on setuptools documentation page: 2025-11-25T07:30:47,964 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-11-25T07:30:47,967 If you don't want 'funvip.test_dataset.terrei.Query' to be distributed and are 2025-11-25T07:30:47,977 already explicitly excluding 'funvip.test_dataset.terrei.Query' via 2025-11-25T07:30:47,978 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-11-25T07:30:47,981 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-11-25T07:30:47,982 combination with a more fine grained `package-data` configuration. 2025-11-25T07:30:47,987 You can read more about "package data files" on setuptools documentation page: 2025-11-25T07:30:48,046 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-11-25T07:30:48,052 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-11-25T07:30:48,052 even if it does not contain any `.py` files. 2025-11-25T07:30:48,053 On the other hand, currently there is no concept of package data 2025-11-25T07:30:48,054 directory, all directories are treated like packages. 2025-11-25T07:30:48,054 ******************************************************************************** 2025-11-25T07:30:48,055 !! 2025-11-25T07:30:48,055 check.warn(importable) 2025-11-25T07:30:48,056 copying funvip/data/Option_manager.xlsx -> build/lib/funvip/data 2025-11-25T07:30:48,056 copying funvip/data/genus_line.txt -> build/lib/funvip/data 2025-11-25T07:30:48,056 copying funvip/external/MAFFT_LICENSE -> build/lib/funvip/external 2025-11-25T07:30:48,057 copying funvip/external/MAFFT_Windows.zip -> build/lib/funvip/external 2025-11-25T07:30:48,057 creating build/lib/funvip/preset 2025-11-25T07:30:48,058 copying funvip/preset/accurate.yaml -> build/lib/funvip/preset 2025-11-25T07:30:48,058 copying funvip/preset/fast.yaml -> build/lib/funvip/preset 2025-11-25T07:30:48,059 creating build/lib/funvip/test_dataset/penicillium 2025-11-25T07:30:48,059 copying funvip/test_dataset/penicillium/Options.config -> build/lib/funvip/test_dataset/penicillium 2025-11-25T07:30:48,059 copying funvip/test_dataset/penicillium/preset.yaml -> build/lib/funvip/test_dataset/penicillium 2025-11-25T07:30:48,060 creating build/lib/funvip/test_dataset/penicillium/DB 2025-11-25T07:30:48,060 copying funvip/test_dataset/penicillium/DB/DB_Penicillium.xlsx -> build/lib/funvip/test_dataset/penicillium/DB 2025-11-25T07:30:48,061 creating build/lib/funvip/test_dataset/penicillium/Query 2025-11-25T07:30:48,061 copying funvip/test_dataset/penicillium/Query/Query.xlsx -> build/lib/funvip/test_dataset/penicillium/Query 2025-11-25T07:30:48,062 creating build/lib/funvip/test_dataset/sanghuangporus 2025-11-25T07:30:48,062 copying funvip/test_dataset/sanghuangporus/preset.yaml -> build/lib/funvip/test_dataset/sanghuangporus 2025-11-25T07:30:48,063 creating build/lib/funvip/test_dataset/sanghuangporus/DB 2025-11-25T07:30:48,063 copying funvip/test_dataset/sanghuangporus/DB/FunVIP_Sanghuangporus_db.xlsx -> build/lib/funvip/test_dataset/sanghuangporus/DB 2025-11-25T07:30:48,064 creating build/lib/funvip/test_dataset/sanghuangporus/Query 2025-11-25T07:30:48,064 copying funvip/test_dataset/sanghuangporus/Query/FunVIP_Sanghuangporus_query.xlsx -> build/lib/funvip/test_dataset/sanghuangporus/Query 2025-11-25T07:30:48,065 creating build/lib/funvip/test_dataset/terrei 2025-11-25T07:30:48,066 copying funvip/test_dataset/terrei/preset.yaml -> build/lib/funvip/test_dataset/terrei 2025-11-25T07:30:48,066 creating build/lib/funvip/test_dataset/terrei/DB 2025-11-25T07:30:48,067 copying funvip/test_dataset/terrei/DB/FunVIP_Aspergillus_db.xlsx -> build/lib/funvip/test_dataset/terrei/DB 2025-11-25T07:30:48,067 creating build/lib/funvip/test_dataset/terrei/Query 2025-11-25T07:30:48,068 copying funvip/test_dataset/terrei/Query/FunVIP_Aspergillus_query.xlsx -> build/lib/funvip/test_dataset/terrei/Query 2025-11-25T07:30:48,068 creating build/lib/funvip/external/BLAST_Windows 2025-11-25T07:30:48,069 copying funvip/external/BLAST_Windows/Uninstall-ncbi-blast-2.12.0+.exe -> build/lib/funvip/external/BLAST_Windows 2025-11-25T07:30:48,069 creating build/lib/funvip/external/BLAST_Windows/bin 2025-11-25T07:30:48,070 copying funvip/external/BLAST_Windows/bin/blastn.exe -> build/lib/funvip/external/BLAST_Windows/bin 2025-11-25T07:30:48,070 copying funvip/external/BLAST_Windows/bin/cleanup-blastdb-volumes.py -> build/lib/funvip/external/BLAST_Windows/bin 2025-11-25T07:30:48,071 copying funvip/external/BLAST_Windows/bin/get_species_taxids.sh -> build/lib/funvip/external/BLAST_Windows/bin 2025-11-25T07:30:48,072 copying funvip/external/BLAST_Windows/bin/legacy_blast.pl -> build/lib/funvip/external/BLAST_Windows/bin 2025-11-25T07:30:48,072 copying funvip/external/BLAST_Windows/bin/makeblastdb.exe -> build/lib/funvip/external/BLAST_Windows/bin 2025-11-25T07:30:48,274 copying funvip/external/BLAST_Windows/bin/nghttp2.dll -> build/lib/funvip/external/BLAST_Windows/bin 2025-11-25T07:30:48,279 copying funvip/external/BLAST_Windows/bin/update_blastdb.pl -> build/lib/funvip/external/BLAST_Windows/bin 2025-11-25T07:30:48,282 creating build/lib/funvip/external/BLAST_Windows/doc 2025-11-25T07:30:48,283 copying funvip/external/BLAST_Windows/doc/README.txt -> build/lib/funvip/external/BLAST_Windows/doc 2025-11-25T07:30:48,286 creating build/lib/funvip/external/FastTree_Windows 2025-11-25T07:30:48,287 copying funvip/external/FastTree_Windows/FastTree.exe -> build/lib/funvip/external/FastTree_Windows 2025-11-25T07:30:48,294 creating build/lib/funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2025-11-25T07:30:48,296 copying funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Gblocks.exe -> build/lib/funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2025-11-25T07:30:48,303 copying funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b/nad3.pir -> build/lib/funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2025-11-25T07:30:48,305 copying funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b/paths -> build/lib/funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2025-11-25T07:30:48,307 creating build/lib/funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation 2025-11-25T07:30:48,308 copying funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation/Gblocks_documentation.html -> build/lib/funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation 2025-11-25T07:30:48,312 creating build/lib/funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2025-11-25T07:30:48,313 copying funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cox2.pir -> build/lib/funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2025-11-25T07:30:48,315 copying funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cytb.pir -> build/lib/funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2025-11-25T07:30:48,318 copying funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad3.pir -> build/lib/funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2025-11-25T07:30:48,321 copying funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad5.pir -> build/lib/funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2025-11-25T07:30:48,324 creating build/lib/funvip/external/RAxML_Windows 2025-11-25T07:30:48,326 copying funvip/external/RAxML_Windows/GPL-3.0.txt -> build/lib/funvip/external/RAxML_Windows 2025-11-25T07:30:48,330 copying funvip/external/RAxML_Windows/README -> build/lib/funvip/external/RAxML_Windows 2025-11-25T07:30:48,332 copying funvip/external/RAxML_Windows/raxmlHPC-PTHREADS-AVX2.exe -> build/lib/funvip/external/RAxML_Windows 2025-11-25T07:30:48,396 creating build/lib/funvip/external/iqtree 2025-11-25T07:30:48,398 copying funvip/external/iqtree/example.cf -> build/lib/funvip/external/iqtree 2025-11-25T07:30:48,507 copying funvip/external/iqtree/example.nex -> build/lib/funvip/external/iqtree 2025-11-25T07:30:48,509 copying funvip/external/iqtree/example.phy -> build/lib/funvip/external/iqtree 2025-11-25T07:30:48,512 copying funvip/external/iqtree/models.nex -> build/lib/funvip/external/iqtree 2025-11-25T07:30:48,518 creating build/lib/funvip/external/iqtree/bin 2025-11-25T07:30:48,519 copying funvip/external/iqtree/bin/iqtree2-click.exe -> build/lib/funvip/external/iqtree/bin 2025-11-25T07:30:48,791 copying funvip/external/iqtree/bin/iqtree2.exe -> build/lib/funvip/external/iqtree/bin 2025-11-25T07:30:49,084 copying funvip/external/iqtree/bin/libiomp5md.dll -> build/lib/funvip/external/iqtree/bin 2025-11-25T07:30:49,103 creating build/lib/funvip/external/mmseqs_Windows 2025-11-25T07:30:49,104 copying funvip/external/mmseqs_Windows/LICENSE.md -> build/lib/funvip/external/mmseqs_Windows 2025-11-25T07:30:49,108 copying funvip/external/mmseqs_Windows/README.md -> build/lib/funvip/external/mmseqs_Windows 2025-11-25T07:30:49,111 copying funvip/external/mmseqs_Windows/mmseqs.bat -> build/lib/funvip/external/mmseqs_Windows 2025-11-25T07:30:49,113 creating build/lib/funvip/external/mmseqs_Windows/bin 2025-11-25T07:30:49,114 copying funvip/external/mmseqs_Windows/bin/busybox.exe -> build/lib/funvip/external/mmseqs_Windows/bin 2025-11-25T07:30:49,126 copying funvip/external/mmseqs_Windows/bin/cygbz2-1.dll -> build/lib/funvip/external/mmseqs_Windows/bin 2025-11-25T07:30:49,129 copying funvip/external/mmseqs_Windows/bin/cyggcc_s-seh-1.dll -> build/lib/funvip/external/mmseqs_Windows/bin 2025-11-25T07:30:49,133 copying funvip/external/mmseqs_Windows/bin/cyggomp-1.dll -> build/lib/funvip/external/mmseqs_Windows/bin 2025-11-25T07:30:49,139 copying funvip/external/mmseqs_Windows/bin/cygstdc++-6.dll -> build/lib/funvip/external/mmseqs_Windows/bin 2025-11-25T07:30:49,170 copying funvip/external/mmseqs_Windows/bin/cygwin1.dll -> build/lib/funvip/external/mmseqs_Windows/bin 2025-11-25T07:30:49,222 copying funvip/external/mmseqs_Windows/bin/cygz.dll -> build/lib/funvip/external/mmseqs_Windows/bin 2025-11-25T07:30:49,226 copying funvip/external/mmseqs_Windows/bin/mmseqs.exe -> build/lib/funvip/external/mmseqs_Windows/bin 2025-11-25T07:30:49,412 creating build/lib/funvip/external/mmseqs_Windows/examples 2025-11-25T07:30:49,413 copying funvip/external/mmseqs_Windows/examples/QUERY.fasta -> build/lib/funvip/external/mmseqs_Windows/examples 2025-11-25T07:30:49,420 creating build/lib/funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:49,421 copying funvip/external/mmseqs_Windows/matrices/PAM10.out -> build/lib/funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:49,423 copying funvip/external/mmseqs_Windows/matrices/PAM100.out -> build/lib/funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:49,426 copying funvip/external/mmseqs_Windows/matrices/PAM110.out -> build/lib/funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:49,428 copying funvip/external/mmseqs_Windows/matrices/PAM120.out -> build/lib/funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:49,430 copying funvip/external/mmseqs_Windows/matrices/PAM130.out -> build/lib/funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:49,433 copying funvip/external/mmseqs_Windows/matrices/PAM140.out -> build/lib/funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:49,435 copying funvip/external/mmseqs_Windows/matrices/PAM150.out -> build/lib/funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:49,437 copying funvip/external/mmseqs_Windows/matrices/PAM160.out -> build/lib/funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:49,440 copying funvip/external/mmseqs_Windows/matrices/PAM170.out -> build/lib/funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:49,442 copying funvip/external/mmseqs_Windows/matrices/PAM180.out -> build/lib/funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:49,444 copying funvip/external/mmseqs_Windows/matrices/PAM190.out -> build/lib/funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:49,447 copying funvip/external/mmseqs_Windows/matrices/PAM20.out -> build/lib/funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:49,450 copying funvip/external/mmseqs_Windows/matrices/PAM30.out -> build/lib/funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:49,452 copying funvip/external/mmseqs_Windows/matrices/PAM40.out -> build/lib/funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:49,455 copying funvip/external/mmseqs_Windows/matrices/PAM50.out -> build/lib/funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:49,457 copying funvip/external/mmseqs_Windows/matrices/PAM60.out -> build/lib/funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:49,459 copying funvip/external/mmseqs_Windows/matrices/PAM70.out -> build/lib/funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:49,462 copying funvip/external/mmseqs_Windows/matrices/PAM80.out -> build/lib/funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:49,464 copying funvip/external/mmseqs_Windows/matrices/PAM90.out -> build/lib/funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:49,466 copying funvip/external/mmseqs_Windows/matrices/VTML10.out -> build/lib/funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:49,468 copying funvip/external/mmseqs_Windows/matrices/VTML120.out -> build/lib/funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:49,471 copying funvip/external/mmseqs_Windows/matrices/VTML160.out -> build/lib/funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:49,473 copying funvip/external/mmseqs_Windows/matrices/VTML20.out -> build/lib/funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:49,475 copying funvip/external/mmseqs_Windows/matrices/VTML40.out -> build/lib/funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:49,477 copying funvip/external/mmseqs_Windows/matrices/VTML80.out -> build/lib/funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:49,480 copying funvip/external/mmseqs_Windows/matrices/blosum100.out -> build/lib/funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:49,482 copying funvip/external/mmseqs_Windows/matrices/blosum30.out -> build/lib/funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:49,484 copying funvip/external/mmseqs_Windows/matrices/blosum35.out -> build/lib/funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:49,487 copying funvip/external/mmseqs_Windows/matrices/blosum40.out -> build/lib/funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:49,489 copying funvip/external/mmseqs_Windows/matrices/blosum45.out -> build/lib/funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:49,491 copying funvip/external/mmseqs_Windows/matrices/blosum50.out -> build/lib/funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:49,494 copying funvip/external/mmseqs_Windows/matrices/blosum55.out -> build/lib/funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:49,496 copying funvip/external/mmseqs_Windows/matrices/blosum60.out -> build/lib/funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:49,498 copying funvip/external/mmseqs_Windows/matrices/blosum62.out -> build/lib/funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:49,501 copying funvip/external/mmseqs_Windows/matrices/blosum65.out -> build/lib/funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:49,503 copying funvip/external/mmseqs_Windows/matrices/blosum70.out -> build/lib/funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:49,505 copying funvip/external/mmseqs_Windows/matrices/blosum75.out -> build/lib/funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:49,508 copying funvip/external/mmseqs_Windows/matrices/blosum80.out -> build/lib/funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:49,510 copying funvip/external/mmseqs_Windows/matrices/blosum85.out -> build/lib/funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:49,512 copying funvip/external/mmseqs_Windows/matrices/blosum90.out -> build/lib/funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:49,515 copying funvip/external/mmseqs_Windows/matrices/blosum95.out -> build/lib/funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:49,517 copying funvip/external/mmseqs_Windows/matrices/nucleotide.out -> build/lib/funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:49,519 creating build/lib/funvip/external/mmseqs_Windows/util 2025-11-25T07:30:49,520 copying funvip/external/mmseqs_Windows/util/bash-completion.sh -> build/lib/funvip/external/mmseqs_Windows/util 2025-11-25T07:30:49,523 creating build/lib/funvip/external/modeltest-ng_Windows 2025-11-25T07:30:49,524 copying funvip/external/modeltest-ng_Windows/cyggcc_s-seh-1.dll -> build/lib/funvip/external/modeltest-ng_Windows 2025-11-25T07:30:49,527 copying funvip/external/modeltest-ng_Windows/cygstdc++-6.dll -> build/lib/funvip/external/modeltest-ng_Windows 2025-11-25T07:30:49,549 copying funvip/external/modeltest-ng_Windows/cygwin1.dll -> build/lib/funvip/external/modeltest-ng_Windows 2025-11-25T07:30:49,605 copying funvip/external/modeltest-ng_Windows/modeltest-ng.exe -> build/lib/funvip/external/modeltest-ng_Windows 2025-11-25T07:30:49,761 creating build/lib/funvip/external/trimal.v1.4/trimAl 2025-11-25T07:30:49,764 copying funvip/external/trimal.v1.4/trimAl/AUTHORS -> build/lib/funvip/external/trimal.v1.4/trimAl 2025-11-25T07:30:49,766 copying funvip/external/trimal.v1.4/trimAl/CHANGELOG -> build/lib/funvip/external/trimal.v1.4/trimAl 2025-11-25T07:30:49,769 copying funvip/external/trimal.v1.4/trimAl/LICENSE -> build/lib/funvip/external/trimal.v1.4/trimAl 2025-11-25T07:30:49,773 copying funvip/external/trimal.v1.4/trimAl/README -> build/lib/funvip/external/trimal.v1.4/trimAl 2025-11-25T07:30:49,775 creating build/lib/funvip/external/trimal.v1.4/trimAl/bin 2025-11-25T07:30:49,777 copying funvip/external/trimal.v1.4/trimAl/bin/libgcc_s_dw2-1.dll -> build/lib/funvip/external/trimal.v1.4/trimAl/bin 2025-11-25T07:30:49,793 copying funvip/external/trimal.v1.4/trimAl/bin/libstdc++-6.dll -> build/lib/funvip/external/trimal.v1.4/trimAl/bin 2025-11-25T07:30:49,824 copying funvip/external/trimal.v1.4/trimAl/bin/trimal.exe -> build/lib/funvip/external/trimal.v1.4/trimAl/bin 2025-11-25T07:30:49,832 creating build/lib/funvip/external/trimal.v1.4/trimAl/scripts 2025-11-25T07:30:49,833 copying funvip/external/trimal.v1.4/trimAl/scripts/check_codon_alignments.py -> build/lib/funvip/external/trimal.v1.4/trimAl/scripts 2025-11-25T07:30:49,835 copying funvip/external/trimal.v1.4/trimAl/scripts/compare_trimmed_msas.sh -> build/lib/funvip/external/trimal.v1.4/trimAl/scripts 2025-11-25T07:30:49,838 copying funvip/external/trimal.v1.4/trimAl/scripts/generateRandomAlignmentsUsingAsSeedRealAlignments.py -> build/lib/funvip/external/trimal.v1.4/trimAl/scripts 2025-11-25T07:30:49,840 copying funvip/external/trimal.v1.4/trimAl/scripts/generate_trimmed_msas.sh -> build/lib/funvip/external/trimal.v1.4/trimAl/scripts 2025-11-25T07:30:49,844 copying funvip/external/trimal.v1.4/trimAl/scripts/get_sequence_representative_from_alignment.py -> build/lib/funvip/external/trimal.v1.4/trimAl/scripts 2025-11-25T07:30:49,847 copying funvip/external/trimal.v1.4/trimAl/scripts/get_sequences_gaps_ratio.py -> build/lib/funvip/external/trimal.v1.4/trimAl/scripts 2025-11-25T07:30:49,849 copying funvip/external/trimal.v1.4/trimAl/scripts/remove_shorter_sequences.py -> build/lib/funvip/external/trimal.v1.4/trimAl/scripts 2025-11-25T07:30:49,851 copying funvip/external/trimal.v1.4/trimAl/scripts/selective_trimming_for_dNdS_analyses.based_neighbours.py -> build/lib/funvip/external/trimal.v1.4/trimAl/scripts 2025-11-25T07:30:49,854 copying funvip/external/trimal.v1.4/trimAl/scripts/set_manual_boundaries.py -> build/lib/funvip/external/trimal.v1.4/trimAl/scripts 2025-11-25T07:30:49,857 creating build/lib/funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:49,858 copying funvip/external/trimal.v1.4/trimAl/source/alignment.cpp -> build/lib/funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:49,863 copying funvip/external/trimal.v1.4/trimAl/source/alignment.h -> build/lib/funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:49,866 copying funvip/external/trimal.v1.4/trimAl/source/alignment.o -> build/lib/funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:49,871 copying funvip/external/trimal.v1.4/trimAl/source/autAlignment.cpp -> build/lib/funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:49,875 copying funvip/external/trimal.v1.4/trimAl/source/autAlignment.o -> build/lib/funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:49,878 copying funvip/external/trimal.v1.4/trimAl/source/compareFiles.cpp -> build/lib/funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:49,881 copying funvip/external/trimal.v1.4/trimAl/source/compareFiles.h -> build/lib/funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:49,883 copying funvip/external/trimal.v1.4/trimAl/source/compareFiles.o -> build/lib/funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:49,886 copying funvip/external/trimal.v1.4/trimAl/source/defines.h -> build/lib/funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:49,888 copying funvip/external/trimal.v1.4/trimAl/source/main.cpp -> build/lib/funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:49,892 copying funvip/external/trimal.v1.4/trimAl/source/makefile -> build/lib/funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:49,895 copying funvip/external/trimal.v1.4/trimAl/source/makefile.MacOS -> build/lib/funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:49,897 copying funvip/external/trimal.v1.4/trimAl/source/readAl.cpp -> build/lib/funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:49,900 copying funvip/external/trimal.v1.4/trimAl/source/readal.exe -> build/lib/funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:49,908 copying funvip/external/trimal.v1.4/trimAl/source/rwAlignment.cpp -> build/lib/funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:49,912 copying funvip/external/trimal.v1.4/trimAl/source/rwAlignment.o -> build/lib/funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:49,917 copying funvip/external/trimal.v1.4/trimAl/source/sequencesMatrix.cpp -> build/lib/funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:49,920 copying funvip/external/trimal.v1.4/trimAl/source/sequencesMatrix.h -> build/lib/funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:49,922 copying funvip/external/trimal.v1.4/trimAl/source/sequencesMatrix.o -> build/lib/funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:49,925 copying funvip/external/trimal.v1.4/trimAl/source/similarityMatrix.cpp -> build/lib/funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:49,927 copying funvip/external/trimal.v1.4/trimAl/source/similarityMatrix.h -> build/lib/funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:49,930 copying funvip/external/trimal.v1.4/trimAl/source/similarityMatrix.o -> build/lib/funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:49,933 copying funvip/external/trimal.v1.4/trimAl/source/statAl.cpp -> build/lib/funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:49,936 copying funvip/external/trimal.v1.4/trimAl/source/statal.exe -> build/lib/funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:49,944 copying funvip/external/trimal.v1.4/trimAl/source/statisticsConservation.cpp -> build/lib/funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:49,948 copying funvip/external/trimal.v1.4/trimAl/source/statisticsConservation.h -> build/lib/funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:49,951 copying funvip/external/trimal.v1.4/trimAl/source/statisticsConservation.o -> build/lib/funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:49,953 copying funvip/external/trimal.v1.4/trimAl/source/statisticsFiles.cpp -> build/lib/funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:49,956 copying funvip/external/trimal.v1.4/trimAl/source/statisticsFiles.h -> build/lib/funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:49,959 copying funvip/external/trimal.v1.4/trimAl/source/statisticsGaps.cpp -> build/lib/funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:49,962 copying funvip/external/trimal.v1.4/trimAl/source/statisticsGaps.h -> build/lib/funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:49,965 copying funvip/external/trimal.v1.4/trimAl/source/statisticsGaps.o -> build/lib/funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:49,968 copying funvip/external/trimal.v1.4/trimAl/source/utils.cpp -> build/lib/funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:49,972 copying funvip/external/trimal.v1.4/trimAl/source/utils.h -> build/lib/funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:49,975 copying funvip/external/trimal.v1.4/trimAl/source/utils.o -> build/lib/funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:49,979 copying funvip/external/trimal.v1.4/trimAl/source/values.h -> build/lib/funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:49,982 copying funvip/src/.gitignore -> build/lib/funvip/src 2025-11-25T07:30:49,984 creating build/lib/funvip/src/__pycache__ 2025-11-25T07:30:49,985 copying funvip/src/__pycache__/CATV_pipe.cpython-310.pyc -> build/lib/funvip/src/__pycache__ 2025-11-25T07:30:49,988 copying funvip/src/__pycache__/CAT_V.cpython-310.pyc -> build/lib/funvip/src/__pycache__ 2025-11-25T07:30:49,991 copying funvip/src/__pycache__/CAT_V.cpython-39.pyc -> build/lib/funvip/src/__pycache__ 2025-11-25T07:30:49,995 copying funvip/src/__pycache__/CAT_V_pipe.cpython-39.pyc -> build/lib/funvip/src/__pycache__ 2025-11-25T07:30:49,998 copying funvip/src/__pycache__/__init__.cpython-310.pyc -> build/lib/funvip/src/__pycache__ 2025-11-25T07:30:50,000 copying funvip/src/__pycache__/__init__.cpython-39.pyc -> build/lib/funvip/src/__pycache__ 2025-11-25T07:30:50,003 copying funvip/src/__pycache__/align.cpython-310.pyc -> build/lib/funvip/src/__pycache__ 2025-11-25T07:30:50,005 copying funvip/src/__pycache__/cluster.cpython-39.pyc -> build/lib/funvip/src/__pycache__ 2025-11-25T07:30:50,008 copying funvip/src/__pycache__/dataset.cpython-39.pyc -> build/lib/funvip/src/__pycache__ 2025-11-25T07:30:50,011 copying funvip/src/__pycache__/ext.cpython-310.pyc -> build/lib/funvip/src/__pycache__ 2025-11-25T07:30:50,014 copying funvip/src/__pycache__/ext.cpython-39.pyc -> build/lib/funvip/src/__pycache__ 2025-11-25T07:30:50,017 copying funvip/src/__pycache__/hasher.cpython-39.pyc -> build/lib/funvip/src/__pycache__ 2025-11-25T07:30:50,020 copying funvip/src/__pycache__/initialize.cpython-39.pyc -> build/lib/funvip/src/__pycache__ 2025-11-25T07:30:50,023 copying funvip/src/__pycache__/io.cpython-310.pyc -> build/lib/funvip/src/__pycache__ 2025-11-25T07:30:50,026 copying funvip/src/__pycache__/io.cpython-39.pyc -> build/lib/funvip/src/__pycache__ 2025-11-25T07:30:50,029 copying funvip/src/__pycache__/logger.cpython-39.pyc -> build/lib/funvip/src/__pycache__ 2025-11-25T07:30:50,032 copying funvip/src/__pycache__/modeltest.cpython-39.pyc -> build/lib/funvip/src/__pycache__ 2025-11-25T07:30:50,035 copying funvip/src/__pycache__/multigene.cpython-39.pyc -> build/lib/funvip/src/__pycache__ 2025-11-25T07:30:50,037 copying funvip/src/__pycache__/ncbi.cpython-39.pyc -> build/lib/funvip/src/__pycache__ 2025-11-25T07:30:50,040 copying funvip/src/__pycache__/opt_generator.cpython-39.pyc -> build/lib/funvip/src/__pycache__ 2025-11-25T07:30:50,043 copying funvip/src/__pycache__/reporter.cpython-39.pyc -> build/lib/funvip/src/__pycache__ 2025-11-25T07:30:50,046 copying funvip/src/__pycache__/search.cpython-39.pyc -> build/lib/funvip/src/__pycache__ 2025-11-25T07:30:50,049 copying funvip/src/__pycache__/tool.cpython-39.pyc -> build/lib/funvip/src/__pycache__ 2025-11-25T07:30:50,052 copying funvip/src/__pycache__/validation.cpython-39.pyc -> build/lib/funvip/src/__pycache__ 2025-11-25T07:30:50,054 copying funvip/src/__pycache__/visualize.cpython-39.pyc -> build/lib/funvip/src/__pycache__ 2025-11-25T07:30:50,057 creating build/lib/funvip/src/templates 2025-11-25T07:30:50,058 copying funvip/src/templates/template.html -> build/lib/funvip/src/templates 2025-11-25T07:30:50,061 copying funvip/preset/.gitignore -> build/lib/funvip/preset 2025-11-25T07:30:50,078 installing to build/bdist.linux-armv7l/wheel 2025-11-25T07:30:50,079 running install 2025-11-25T07:30:50,102 running install_lib 2025-11-25T07:30:50,109 creating build/bdist.linux-armv7l/wheel 2025-11-25T07:30:50,112 creating build/bdist.linux-armv7l/wheel/funvip 2025-11-25T07:30:50,114 creating build/bdist.linux-armv7l/wheel/funvip/data 2025-11-25T07:30:50,115 copying build/lib/funvip/data/Option_manager.xlsx -> build/bdist.linux-armv7l/wheel/./funvip/data 2025-11-25T07:30:50,119 copying build/lib/funvip/data/genus_line.txt -> build/bdist.linux-armv7l/wheel/./funvip/data 2025-11-25T07:30:50,122 copying build/lib/funvip/data/__init__.py -> build/bdist.linux-armv7l/wheel/./funvip/data 2025-11-25T07:30:50,125 creating build/bdist.linux-armv7l/wheel/funvip/test_dataset 2025-11-25T07:30:50,127 creating build/bdist.linux-armv7l/wheel/funvip/test_dataset/penicillium 2025-11-25T07:30:50,128 copying build/lib/funvip/test_dataset/penicillium/preset.yaml -> build/bdist.linux-armv7l/wheel/./funvip/test_dataset/penicillium 2025-11-25T07:30:50,131 creating build/bdist.linux-armv7l/wheel/funvip/test_dataset/penicillium/DB 2025-11-25T07:30:50,133 copying build/lib/funvip/test_dataset/penicillium/DB/DB_Penicillium.xlsx -> build/bdist.linux-armv7l/wheel/./funvip/test_dataset/penicillium/DB 2025-11-25T07:30:50,143 copying build/lib/funvip/test_dataset/penicillium/Options.config -> build/bdist.linux-armv7l/wheel/./funvip/test_dataset/penicillium 2025-11-25T07:30:50,146 creating build/bdist.linux-armv7l/wheel/funvip/test_dataset/penicillium/Query 2025-11-25T07:30:50,147 copying build/lib/funvip/test_dataset/penicillium/Query/Query.xlsx -> build/bdist.linux-armv7l/wheel/./funvip/test_dataset/penicillium/Query 2025-11-25T07:30:50,152 creating build/bdist.linux-armv7l/wheel/funvip/test_dataset/sanghuangporus 2025-11-25T07:30:50,153 copying build/lib/funvip/test_dataset/sanghuangporus/preset.yaml -> build/bdist.linux-armv7l/wheel/./funvip/test_dataset/sanghuangporus 2025-11-25T07:30:50,156 creating build/bdist.linux-armv7l/wheel/funvip/test_dataset/sanghuangporus/DB 2025-11-25T07:30:50,158 copying build/lib/funvip/test_dataset/sanghuangporus/DB/FunVIP_Sanghuangporus_db.xlsx -> build/bdist.linux-armv7l/wheel/./funvip/test_dataset/sanghuangporus/DB 2025-11-25T07:30:50,161 creating build/bdist.linux-armv7l/wheel/funvip/test_dataset/sanghuangporus/Query 2025-11-25T07:30:50,163 copying build/lib/funvip/test_dataset/sanghuangporus/Query/FunVIP_Sanghuangporus_query.xlsx -> build/bdist.linux-armv7l/wheel/./funvip/test_dataset/sanghuangporus/Query 2025-11-25T07:30:50,166 creating build/bdist.linux-armv7l/wheel/funvip/test_dataset/terrei 2025-11-25T07:30:50,168 copying build/lib/funvip/test_dataset/terrei/preset.yaml -> build/bdist.linux-armv7l/wheel/./funvip/test_dataset/terrei 2025-11-25T07:30:50,171 creating build/bdist.linux-armv7l/wheel/funvip/test_dataset/terrei/DB 2025-11-25T07:30:50,172 copying build/lib/funvip/test_dataset/terrei/DB/FunVIP_Aspergillus_db.xlsx -> build/bdist.linux-armv7l/wheel/./funvip/test_dataset/terrei/DB 2025-11-25T07:30:50,176 creating build/bdist.linux-armv7l/wheel/funvip/test_dataset/terrei/Query 2025-11-25T07:30:50,177 copying build/lib/funvip/test_dataset/terrei/Query/FunVIP_Aspergillus_query.xlsx -> build/bdist.linux-armv7l/wheel/./funvip/test_dataset/terrei/Query 2025-11-25T07:30:50,180 copying build/lib/funvip/FunVIP_GUI.py -> build/bdist.linux-armv7l/wheel/./funvip 2025-11-25T07:30:50,184 creating build/bdist.linux-armv7l/wheel/funvip/external 2025-11-25T07:30:50,186 creating build/bdist.linux-armv7l/wheel/funvip/external/Gblocks_Windows_0.91b 2025-11-25T07:30:50,188 creating build/bdist.linux-armv7l/wheel/funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2025-11-25T07:30:50,190 copying build/lib/funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Gblocks.exe -> build/bdist.linux-armv7l/wheel/./funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2025-11-25T07:30:50,198 copying build/lib/funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b/nad3.pir -> build/bdist.linux-armv7l/wheel/./funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2025-11-25T07:30:50,200 creating build/bdist.linux-armv7l/wheel/funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation 2025-11-25T07:30:50,201 copying build/lib/funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation/Gblocks_documentation.html -> build/bdist.linux-armv7l/wheel/./funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation 2025-11-25T07:30:50,205 copying build/lib/funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b/paths -> build/bdist.linux-armv7l/wheel/./funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2025-11-25T07:30:50,207 creating build/bdist.linux-armv7l/wheel/funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2025-11-25T07:30:50,209 copying build/lib/funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad3.pir -> build/bdist.linux-armv7l/wheel/./funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2025-11-25T07:30:50,211 copying build/lib/funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cox2.pir -> build/bdist.linux-armv7l/wheel/./funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2025-11-25T07:30:50,213 copying build/lib/funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cytb.pir -> build/bdist.linux-armv7l/wheel/./funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2025-11-25T07:30:50,215 copying build/lib/funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad5.pir -> build/bdist.linux-armv7l/wheel/./funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2025-11-25T07:30:50,218 creating build/bdist.linux-armv7l/wheel/funvip/external/FastTree_Windows 2025-11-25T07:30:50,219 copying build/lib/funvip/external/FastTree_Windows/FastTree.exe -> build/bdist.linux-armv7l/wheel/./funvip/external/FastTree_Windows 2025-11-25T07:30:50,235 creating build/bdist.linux-armv7l/wheel/funvip/external/modeltest-ng_Windows 2025-11-25T07:30:50,236 copying build/lib/funvip/external/modeltest-ng_Windows/cygwin1.dll -> build/bdist.linux-armv7l/wheel/./funvip/external/modeltest-ng_Windows 2025-11-25T07:30:50,301 copying build/lib/funvip/external/modeltest-ng_Windows/modeltest-ng.exe -> build/bdist.linux-armv7l/wheel/./funvip/external/modeltest-ng_Windows 2025-11-25T07:30:50,457 copying build/lib/funvip/external/modeltest-ng_Windows/cygstdc++-6.dll -> build/bdist.linux-armv7l/wheel/./funvip/external/modeltest-ng_Windows 2025-11-25T07:30:50,493 copying build/lib/funvip/external/modeltest-ng_Windows/cyggcc_s-seh-1.dll -> build/bdist.linux-armv7l/wheel/./funvip/external/modeltest-ng_Windows 2025-11-25T07:30:50,498 creating build/bdist.linux-armv7l/wheel/funvip/external/trimal.v1.4 2025-11-25T07:30:50,500 creating build/bdist.linux-armv7l/wheel/funvip/external/trimal.v1.4/trimAl 2025-11-25T07:30:50,501 copying build/lib/funvip/external/trimal.v1.4/trimAl/AUTHORS -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl 2025-11-25T07:30:50,504 copying build/lib/funvip/external/trimal.v1.4/trimAl/CHANGELOG -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl 2025-11-25T07:30:50,508 creating build/bdist.linux-armv7l/wheel/funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:50,509 copying build/lib/funvip/external/trimal.v1.4/trimAl/source/autAlignment.cpp -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:50,513 copying build/lib/funvip/external/trimal.v1.4/trimAl/source/sequencesMatrix.h -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:50,515 copying build/lib/funvip/external/trimal.v1.4/trimAl/source/statisticsGaps.cpp -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:50,518 copying build/lib/funvip/external/trimal.v1.4/trimAl/source/autAlignment.o -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:50,522 copying build/lib/funvip/external/trimal.v1.4/trimAl/source/statisticsFiles.h -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:50,524 copying build/lib/funvip/external/trimal.v1.4/trimAl/source/statisticsConservation.cpp -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:50,527 copying build/lib/funvip/external/trimal.v1.4/trimAl/source/rwAlignment.cpp -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:50,531 copying build/lib/funvip/external/trimal.v1.4/trimAl/source/sequencesMatrix.o -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:50,534 copying build/lib/funvip/external/trimal.v1.4/trimAl/source/readAl.cpp -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:50,536 copying build/lib/funvip/external/trimal.v1.4/trimAl/source/sequencesMatrix.cpp -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:50,538 copying build/lib/funvip/external/trimal.v1.4/trimAl/source/statisticsGaps.h -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:50,540 copying build/lib/funvip/external/trimal.v1.4/trimAl/source/statal.exe -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:50,547 copying build/lib/funvip/external/trimal.v1.4/trimAl/source/similarityMatrix.o -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:50,550 copying build/lib/funvip/external/trimal.v1.4/trimAl/source/statisticsConservation.h -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:50,552 copying build/lib/funvip/external/trimal.v1.4/trimAl/source/readal.exe -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:50,558 copying build/lib/funvip/external/trimal.v1.4/trimAl/source/alignment.o -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:50,562 copying build/lib/funvip/external/trimal.v1.4/trimAl/source/rwAlignment.o -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:50,566 copying build/lib/funvip/external/trimal.v1.4/trimAl/source/compareFiles.cpp -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:50,568 copying build/lib/funvip/external/trimal.v1.4/trimAl/source/makefile.MacOS -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:50,570 copying build/lib/funvip/external/trimal.v1.4/trimAl/source/makefile -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:50,572 copying build/lib/funvip/external/trimal.v1.4/trimAl/source/utils.h -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:50,575 copying build/lib/funvip/external/trimal.v1.4/trimAl/source/statAl.cpp -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:50,577 copying build/lib/funvip/external/trimal.v1.4/trimAl/source/similarityMatrix.h -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:50,579 copying build/lib/funvip/external/trimal.v1.4/trimAl/source/compareFiles.o -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:50,582 copying build/lib/funvip/external/trimal.v1.4/trimAl/source/utils.o -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:50,584 copying build/lib/funvip/external/trimal.v1.4/trimAl/source/statisticsGaps.o -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:50,587 copying build/lib/funvip/external/trimal.v1.4/trimAl/source/utils.cpp -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:50,589 copying build/lib/funvip/external/trimal.v1.4/trimAl/source/values.h -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:50,592 copying build/lib/funvip/external/trimal.v1.4/trimAl/source/statisticsFiles.cpp -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:50,594 copying build/lib/funvip/external/trimal.v1.4/trimAl/source/main.cpp -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:50,597 copying build/lib/funvip/external/trimal.v1.4/trimAl/source/compareFiles.h -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:50,599 copying build/lib/funvip/external/trimal.v1.4/trimAl/source/alignment.cpp -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:50,603 copying build/lib/funvip/external/trimal.v1.4/trimAl/source/similarityMatrix.cpp -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:50,606 copying build/lib/funvip/external/trimal.v1.4/trimAl/source/statisticsConservation.o -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:50,608 copying build/lib/funvip/external/trimal.v1.4/trimAl/source/defines.h -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:50,610 copying build/lib/funvip/external/trimal.v1.4/trimAl/source/alignment.h -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/source 2025-11-25T07:30:50,613 creating build/bdist.linux-armv7l/wheel/funvip/external/trimal.v1.4/trimAl/scripts 2025-11-25T07:30:50,614 copying build/lib/funvip/external/trimal.v1.4/trimAl/scripts/generate_trimmed_msas.sh -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/scripts 2025-11-25T07:30:50,618 copying build/lib/funvip/external/trimal.v1.4/trimAl/scripts/remove_shorter_sequences.py -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/scripts 2025-11-25T07:30:50,620 copying build/lib/funvip/external/trimal.v1.4/trimAl/scripts/check_codon_alignments.py -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/scripts 2025-11-25T07:30:50,622 copying build/lib/funvip/external/trimal.v1.4/trimAl/scripts/selective_trimming_for_dNdS_analyses.based_neighbours.py -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/scripts 2025-11-25T07:30:50,624 copying build/lib/funvip/external/trimal.v1.4/trimAl/scripts/get_sequences_gaps_ratio.py -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/scripts 2025-11-25T07:30:50,626 copying build/lib/funvip/external/trimal.v1.4/trimAl/scripts/compare_trimmed_msas.sh -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/scripts 2025-11-25T07:30:50,628 copying build/lib/funvip/external/trimal.v1.4/trimAl/scripts/generateRandomAlignmentsUsingAsSeedRealAlignments.py -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/scripts 2025-11-25T07:30:50,630 copying build/lib/funvip/external/trimal.v1.4/trimAl/scripts/get_sequence_representative_from_alignment.py -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/scripts 2025-11-25T07:30:50,632 copying build/lib/funvip/external/trimal.v1.4/trimAl/scripts/set_manual_boundaries.py -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/scripts 2025-11-25T07:30:50,635 creating build/bdist.linux-armv7l/wheel/funvip/external/trimal.v1.4/trimAl/bin 2025-11-25T07:30:50,636 copying build/lib/funvip/external/trimal.v1.4/trimAl/bin/libstdc++-6.dll -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/bin 2025-11-25T07:30:50,660 copying build/lib/funvip/external/trimal.v1.4/trimAl/bin/trimal.exe -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/bin 2025-11-25T07:30:50,668 copying build/lib/funvip/external/trimal.v1.4/trimAl/bin/libgcc_s_dw2-1.dll -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl/bin 2025-11-25T07:30:50,687 copying build/lib/funvip/external/trimal.v1.4/trimAl/LICENSE -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl 2025-11-25T07:30:50,690 copying build/lib/funvip/external/trimal.v1.4/trimAl/README -> build/bdist.linux-armv7l/wheel/./funvip/external/trimal.v1.4/trimAl 2025-11-25T07:30:50,693 creating build/bdist.linux-armv7l/wheel/funvip/external/iqtree 2025-11-25T07:30:50,694 copying build/lib/funvip/external/iqtree/example.nex -> build/bdist.linux-armv7l/wheel/./funvip/external/iqtree 2025-11-25T07:30:50,697 creating build/bdist.linux-armv7l/wheel/funvip/external/iqtree/bin 2025-11-25T07:30:50,698 copying build/lib/funvip/external/iqtree/bin/iqtree2.exe -> build/bdist.linux-armv7l/wheel/./funvip/external/iqtree/bin 2025-11-25T07:30:50,859 copying build/lib/funvip/external/iqtree/bin/libiomp5md.dll -> build/bdist.linux-armv7l/wheel/./funvip/external/iqtree/bin 2025-11-25T07:30:50,877 copying build/lib/funvip/external/iqtree/bin/iqtree2-click.exe -> build/bdist.linux-armv7l/wheel/./funvip/external/iqtree/bin 2025-11-25T07:30:51,046 copying build/lib/funvip/external/iqtree/models.nex -> build/bdist.linux-armv7l/wheel/./funvip/external/iqtree 2025-11-25T07:30:51,074 copying build/lib/funvip/external/iqtree/example.cf -> build/bdist.linux-armv7l/wheel/./funvip/external/iqtree 2025-11-25T07:30:51,133 copying build/lib/funvip/external/iqtree/example.phy -> build/bdist.linux-armv7l/wheel/./funvip/external/iqtree 2025-11-25T07:30:51,136 copying build/lib/funvip/external/MAFFT_LICENSE -> build/bdist.linux-armv7l/wheel/./funvip/external 2025-11-25T07:30:51,180 copying build/lib/funvip/external/MAFFT_Windows.zip -> build/bdist.linux-armv7l/wheel/./funvip/external 2025-11-25T07:30:51,584 creating build/bdist.linux-armv7l/wheel/funvip/external/BLAST_Windows 2025-11-25T07:30:51,585 creating build/bdist.linux-armv7l/wheel/funvip/external/BLAST_Windows/doc 2025-11-25T07:30:51,587 copying build/lib/funvip/external/BLAST_Windows/doc/README.txt -> build/bdist.linux-armv7l/wheel/./funvip/external/BLAST_Windows/doc 2025-11-25T07:30:51,589 creating build/bdist.linux-armv7l/wheel/funvip/external/BLAST_Windows/bin 2025-11-25T07:30:51,590 copying build/lib/funvip/external/BLAST_Windows/bin/blastn.exe -> build/bdist.linux-armv7l/wheel/./funvip/external/BLAST_Windows/bin 2025-11-25T07:30:51,871 copying build/lib/funvip/external/BLAST_Windows/bin/legacy_blast.pl -> build/bdist.linux-armv7l/wheel/./funvip/external/BLAST_Windows/bin 2025-11-25T07:30:51,874 copying build/lib/funvip/external/BLAST_Windows/bin/get_species_taxids.sh -> build/bdist.linux-armv7l/wheel/./funvip/external/BLAST_Windows/bin 2025-11-25T07:30:51,876 copying build/lib/funvip/external/BLAST_Windows/bin/update_blastdb.pl -> build/bdist.linux-armv7l/wheel/./funvip/external/BLAST_Windows/bin 2025-11-25T07:30:51,879 copying build/lib/funvip/external/BLAST_Windows/bin/nghttp2.dll -> build/bdist.linux-armv7l/wheel/./funvip/external/BLAST_Windows/bin 2025-11-25T07:30:51,883 copying build/lib/funvip/external/BLAST_Windows/bin/cleanup-blastdb-volumes.py -> build/bdist.linux-armv7l/wheel/./funvip/external/BLAST_Windows/bin 2025-11-25T07:30:51,885 copying build/lib/funvip/external/BLAST_Windows/bin/makeblastdb.exe -> build/bdist.linux-armv7l/wheel/./funvip/external/BLAST_Windows/bin 2025-11-25T07:30:52,095 copying build/lib/funvip/external/BLAST_Windows/Uninstall-ncbi-blast-2.12.0+.exe -> build/bdist.linux-armv7l/wheel/./funvip/external/BLAST_Windows 2025-11-25T07:30:52,098 creating build/bdist.linux-armv7l/wheel/funvip/external/RAxML_Windows 2025-11-25T07:30:52,112 copying build/lib/funvip/external/RAxML_Windows/raxmlHPC-PTHREADS-AVX2.exe -> build/bdist.linux-armv7l/wheel/./funvip/external/RAxML_Windows 2025-11-25T07:30:52,146 copying build/lib/funvip/external/RAxML_Windows/GPL-3.0.txt -> build/bdist.linux-armv7l/wheel/./funvip/external/RAxML_Windows 2025-11-25T07:30:52,149 copying build/lib/funvip/external/RAxML_Windows/README -> build/bdist.linux-armv7l/wheel/./funvip/external/RAxML_Windows 2025-11-25T07:30:52,152 copying build/lib/funvip/external/__init__.py -> build/bdist.linux-armv7l/wheel/./funvip/external 2025-11-25T07:30:52,154 creating build/bdist.linux-armv7l/wheel/funvip/external/mmseqs_Windows 2025-11-25T07:30:52,156 creating build/bdist.linux-armv7l/wheel/funvip/external/mmseqs_Windows/util 2025-11-25T07:30:52,158 copying build/lib/funvip/external/mmseqs_Windows/util/bash-completion.sh -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/util 2025-11-25T07:30:52,160 copying build/lib/funvip/external/mmseqs_Windows/README.md -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows 2025-11-25T07:30:52,163 creating build/bdist.linux-armv7l/wheel/funvip/external/mmseqs_Windows/bin 2025-11-25T07:30:52,165 copying build/lib/funvip/external/mmseqs_Windows/bin/cygwin1.dll -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/bin 2025-11-25T07:30:52,252 copying build/lib/funvip/external/mmseqs_Windows/bin/cygbz2-1.dll -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/bin 2025-11-25T07:30:52,256 copying build/lib/funvip/external/mmseqs_Windows/bin/cyggomp-1.dll -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/bin 2025-11-25T07:30:52,262 copying build/lib/funvip/external/mmseqs_Windows/bin/mmseqs.exe -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/bin 2025-11-25T07:30:52,581 copying build/lib/funvip/external/mmseqs_Windows/bin/cygz.dll -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/bin 2025-11-25T07:30:52,584 copying build/lib/funvip/external/mmseqs_Windows/bin/busybox.exe -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/bin 2025-11-25T07:30:52,595 copying build/lib/funvip/external/mmseqs_Windows/bin/cygstdc++-6.dll -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/bin 2025-11-25T07:30:52,624 copying build/lib/funvip/external/mmseqs_Windows/bin/cyggcc_s-seh-1.dll -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/bin 2025-11-25T07:30:52,627 creating build/bdist.linux-armv7l/wheel/funvip/external/mmseqs_Windows/examples 2025-11-25T07:30:52,628 copying build/lib/funvip/external/mmseqs_Windows/examples/QUERY.fasta -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/examples 2025-11-25T07:30:52,636 copying build/lib/funvip/external/mmseqs_Windows/LICENSE.md -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows 2025-11-25T07:30:52,638 copying build/lib/funvip/external/mmseqs_Windows/mmseqs.bat -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows 2025-11-25T07:30:52,641 creating build/bdist.linux-armv7l/wheel/funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:52,642 copying build/lib/funvip/external/mmseqs_Windows/matrices/PAM180.out -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:52,644 copying build/lib/funvip/external/mmseqs_Windows/matrices/PAM150.out -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:52,646 copying build/lib/funvip/external/mmseqs_Windows/matrices/blosum95.out -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:52,648 copying build/lib/funvip/external/mmseqs_Windows/matrices/PAM50.out -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:52,650 copying build/lib/funvip/external/mmseqs_Windows/matrices/blosum45.out -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:52,652 copying build/lib/funvip/external/mmseqs_Windows/matrices/PAM130.out -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:52,654 copying build/lib/funvip/external/mmseqs_Windows/matrices/blosum55.out -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:52,656 copying build/lib/funvip/external/mmseqs_Windows/matrices/VTML10.out -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:52,658 copying build/lib/funvip/external/mmseqs_Windows/matrices/VTML40.out -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:52,660 copying build/lib/funvip/external/mmseqs_Windows/matrices/blosum75.out -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:52,662 copying build/lib/funvip/external/mmseqs_Windows/matrices/blosum50.out -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:52,664 copying build/lib/funvip/external/mmseqs_Windows/matrices/PAM110.out -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:52,666 copying build/lib/funvip/external/mmseqs_Windows/matrices/blosum100.out -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:52,668 copying build/lib/funvip/external/mmseqs_Windows/matrices/blosum70.out -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:52,670 copying build/lib/funvip/external/mmseqs_Windows/matrices/PAM120.out -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:52,672 copying build/lib/funvip/external/mmseqs_Windows/matrices/PAM40.out -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:52,673 copying build/lib/funvip/external/mmseqs_Windows/matrices/VTML120.out -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:52,675 copying build/lib/funvip/external/mmseqs_Windows/matrices/blosum90.out -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:52,677 copying build/lib/funvip/external/mmseqs_Windows/matrices/PAM170.out -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:52,678 copying build/lib/funvip/external/mmseqs_Windows/matrices/VTML160.out -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:52,680 copying build/lib/funvip/external/mmseqs_Windows/matrices/blosum85.out -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:52,682 copying build/lib/funvip/external/mmseqs_Windows/matrices/PAM140.out -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:52,684 copying build/lib/funvip/external/mmseqs_Windows/matrices/blosum65.out -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:52,686 copying build/lib/funvip/external/mmseqs_Windows/matrices/PAM100.out -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:52,688 copying build/lib/funvip/external/mmseqs_Windows/matrices/PAM70.out -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:52,689 copying build/lib/funvip/external/mmseqs_Windows/matrices/PAM160.out -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:52,691 copying build/lib/funvip/external/mmseqs_Windows/matrices/blosum35.out -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:52,693 copying build/lib/funvip/external/mmseqs_Windows/matrices/nucleotide.out -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:52,695 copying build/lib/funvip/external/mmseqs_Windows/matrices/VTML80.out -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:52,697 copying build/lib/funvip/external/mmseqs_Windows/matrices/PAM60.out -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:52,699 copying build/lib/funvip/external/mmseqs_Windows/matrices/blosum40.out -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:52,701 copying build/lib/funvip/external/mmseqs_Windows/matrices/PAM10.out -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:52,703 copying build/lib/funvip/external/mmseqs_Windows/matrices/blosum62.out -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:52,704 copying build/lib/funvip/external/mmseqs_Windows/matrices/VTML20.out -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:52,706 copying build/lib/funvip/external/mmseqs_Windows/matrices/blosum60.out -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:52,708 copying build/lib/funvip/external/mmseqs_Windows/matrices/blosum30.out -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:52,710 copying build/lib/funvip/external/mmseqs_Windows/matrices/PAM30.out -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:52,712 copying build/lib/funvip/external/mmseqs_Windows/matrices/blosum80.out -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:52,714 copying build/lib/funvip/external/mmseqs_Windows/matrices/PAM20.out -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:52,716 copying build/lib/funvip/external/mmseqs_Windows/matrices/PAM80.out -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:52,717 copying build/lib/funvip/external/mmseqs_Windows/matrices/PAM90.out -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:52,719 copying build/lib/funvip/external/mmseqs_Windows/matrices/PAM190.out -> build/bdist.linux-armv7l/wheel/./funvip/external/mmseqs_Windows/matrices 2025-11-25T07:30:52,722 creating build/bdist.linux-armv7l/wheel/funvip/src 2025-11-25T07:30:52,723 copying build/lib/funvip/src/trim.py -> build/bdist.linux-armv7l/wheel/./funvip/src 2025-11-25T07:30:52,725 copying build/lib/funvip/src/cluster.py -> build/bdist.linux-armv7l/wheel/./funvip/src 2025-11-25T07:30:52,727 copying build/lib/funvip/src/save.py -> build/bdist.linux-armv7l/wheel/./funvip/src 2025-11-25T07:30:52,729 copying build/lib/funvip/src/concatenate.py -> build/bdist.linux-armv7l/wheel/./funvip/src 2025-11-25T07:30:52,732 copying build/lib/funvip/src/tree.py -> build/bdist.linux-armv7l/wheel/./funvip/src 2025-11-25T07:30:52,734 copying build/lib/funvip/src/tree_interpretation.py -> build/bdist.linux-armv7l/wheel/./funvip/src 2025-11-25T07:30:52,737 copying build/lib/funvip/src/opt_generator.py -> build/bdist.linux-armv7l/wheel/./funvip/src 2025-11-25T07:30:52,739 copying build/lib/funvip/src/align.py -> build/bdist.linux-armv7l/wheel/./funvip/src 2025-11-25T07:30:52,741 copying build/lib/funvip/src/validate_input.py -> build/bdist.linux-armv7l/wheel/./funvip/src 2025-11-25T07:30:52,744 copying build/lib/funvip/src/logger.py -> build/bdist.linux-armv7l/wheel/./funvip/src 2025-11-25T07:30:52,745 copying build/lib/funvip/src/ncbi.py -> build/bdist.linux-armv7l/wheel/./funvip/src 2025-11-25T07:30:52,747 copying build/lib/funvip/src/logics.py -> build/bdist.linux-armv7l/wheel/./funvip/src 2025-11-25T07:30:52,749 copying build/lib/funvip/src/.gitignore -> build/bdist.linux-armv7l/wheel/./funvip/src 2025-11-25T07:30:52,751 copying build/lib/funvip/src/tool.py -> build/bdist.linux-armv7l/wheel/./funvip/src 2025-11-25T07:30:52,753 copying build/lib/funvip/src/modeltest.py -> build/bdist.linux-armv7l/wheel/./funvip/src 2025-11-25T07:30:52,756 copying build/lib/funvip/src/command.py -> build/bdist.linux-armv7l/wheel/./funvip/src 2025-11-25T07:30:52,758 copying build/lib/funvip/src/tree_interpretation_pipe.py -> build/bdist.linux-armv7l/wheel/./funvip/src 2025-11-25T07:30:52,761 copying build/lib/funvip/src/search.py -> build/bdist.linux-armv7l/wheel/./funvip/src 2025-11-25T07:30:52,763 copying build/lib/funvip/src/validate_option.py -> build/bdist.linux-armv7l/wheel/./funvip/src 2025-11-25T07:30:52,767 creating build/bdist.linux-armv7l/wheel/funvip/src/templates 2025-11-25T07:30:52,768 copying build/lib/funvip/src/templates/template.html -> build/bdist.linux-armv7l/wheel/./funvip/src/templates 2025-11-25T07:30:52,770 copying build/lib/funvip/src/dataset.py -> build/bdist.linux-armv7l/wheel/./funvip/src 2025-11-25T07:30:52,773 copying build/lib/funvip/src/visualize.py -> build/bdist.linux-armv7l/wheel/./funvip/src 2025-11-25T07:30:52,776 copying build/lib/funvip/src/ext.py -> build/bdist.linux-armv7l/wheel/./funvip/src 2025-11-25T07:30:52,778 copying build/lib/funvip/src/initialize.py -> build/bdist.linux-armv7l/wheel/./funvip/src 2025-11-25T07:30:52,780 copying build/lib/funvip/src/__init__.py -> build/bdist.linux-armv7l/wheel/./funvip/src 2025-11-25T07:30:52,782 copying build/lib/funvip/src/reporter.py -> build/bdist.linux-armv7l/wheel/./funvip/src 2025-11-25T07:30:52,785 copying build/lib/funvip/src/validation.py -> build/bdist.linux-armv7l/wheel/./funvip/src 2025-11-25T07:30:52,786 copying build/lib/funvip/src/version.py -> build/bdist.linux-armv7l/wheel/./funvip/src 2025-11-25T07:30:52,789 copying build/lib/funvip/src/hasher.py -> build/bdist.linux-armv7l/wheel/./funvip/src 2025-11-25T07:30:52,792 creating build/bdist.linux-armv7l/wheel/funvip/src/__pycache__ 2025-11-25T07:30:52,793 copying build/lib/funvip/src/__pycache__/ext.cpython-310.pyc -> build/bdist.linux-armv7l/wheel/./funvip/src/__pycache__ 2025-11-25T07:30:52,795 copying build/lib/funvip/src/__pycache__/CATV_pipe.cpython-310.pyc -> build/bdist.linux-armv7l/wheel/./funvip/src/__pycache__ 2025-11-25T07:30:52,797 copying build/lib/funvip/src/__pycache__/search.cpython-39.pyc -> build/bdist.linux-armv7l/wheel/./funvip/src/__pycache__ 2025-11-25T07:30:52,800 copying build/lib/funvip/src/__pycache__/__init__.cpython-39.pyc -> build/bdist.linux-armv7l/wheel/./funvip/src/__pycache__ 2025-11-25T07:30:52,801 copying build/lib/funvip/src/__pycache__/CAT_V_pipe.cpython-39.pyc -> build/bdist.linux-armv7l/wheel/./funvip/src/__pycache__ 2025-11-25T07:30:52,803 copying build/lib/funvip/src/__pycache__/visualize.cpython-39.pyc -> build/bdist.linux-armv7l/wheel/./funvip/src/__pycache__ 2025-11-25T07:30:52,805 copying build/lib/funvip/src/__pycache__/hasher.cpython-39.pyc -> build/bdist.linux-armv7l/wheel/./funvip/src/__pycache__ 2025-11-25T07:30:52,807 copying build/lib/funvip/src/__pycache__/__init__.cpython-310.pyc -> build/bdist.linux-armv7l/wheel/./funvip/src/__pycache__ 2025-11-25T07:30:52,809 copying build/lib/funvip/src/__pycache__/initialize.cpython-39.pyc -> build/bdist.linux-armv7l/wheel/./funvip/src/__pycache__ 2025-11-25T07:30:52,811 copying build/lib/funvip/src/__pycache__/tool.cpython-39.pyc -> build/bdist.linux-armv7l/wheel/./funvip/src/__pycache__ 2025-11-25T07:30:52,813 copying build/lib/funvip/src/__pycache__/io.cpython-310.pyc -> build/bdist.linux-armv7l/wheel/./funvip/src/__pycache__ 2025-11-25T07:30:52,816 copying build/lib/funvip/src/__pycache__/io.cpython-39.pyc -> build/bdist.linux-armv7l/wheel/./funvip/src/__pycache__ 2025-11-25T07:30:52,819 copying build/lib/funvip/src/__pycache__/ncbi.cpython-39.pyc -> build/bdist.linux-armv7l/wheel/./funvip/src/__pycache__ 2025-11-25T07:30:52,820 copying build/lib/funvip/src/__pycache__/modeltest.cpython-39.pyc -> build/bdist.linux-armv7l/wheel/./funvip/src/__pycache__ 2025-11-25T07:30:52,822 copying build/lib/funvip/src/__pycache__/logger.cpython-39.pyc -> build/bdist.linux-armv7l/wheel/./funvip/src/__pycache__ 2025-11-25T07:30:52,824 copying build/lib/funvip/src/__pycache__/multigene.cpython-39.pyc -> build/bdist.linux-armv7l/wheel/./funvip/src/__pycache__ 2025-11-25T07:30:52,826 copying build/lib/funvip/src/__pycache__/validation.cpython-39.pyc -> build/bdist.linux-armv7l/wheel/./funvip/src/__pycache__ 2025-11-25T07:30:52,828 copying build/lib/funvip/src/__pycache__/dataset.cpython-39.pyc -> build/bdist.linux-armv7l/wheel/./funvip/src/__pycache__ 2025-11-25T07:30:52,830 copying build/lib/funvip/src/__pycache__/cluster.cpython-39.pyc -> build/bdist.linux-armv7l/wheel/./funvip/src/__pycache__ 2025-11-25T07:30:52,832 copying build/lib/funvip/src/__pycache__/align.cpython-310.pyc -> build/bdist.linux-armv7l/wheel/./funvip/src/__pycache__ 2025-11-25T07:30:52,834 copying build/lib/funvip/src/__pycache__/reporter.cpython-39.pyc -> build/bdist.linux-armv7l/wheel/./funvip/src/__pycache__ 2025-11-25T07:30:52,836 copying build/lib/funvip/src/__pycache__/CAT_V.cpython-310.pyc -> build/bdist.linux-armv7l/wheel/./funvip/src/__pycache__ 2025-11-25T07:30:52,839 copying build/lib/funvip/src/__pycache__/opt_generator.cpython-39.pyc -> build/bdist.linux-armv7l/wheel/./funvip/src/__pycache__ 2025-11-25T07:30:52,841 copying build/lib/funvip/src/__pycache__/CAT_V.cpython-39.pyc -> build/bdist.linux-armv7l/wheel/./funvip/src/__pycache__ 2025-11-25T07:30:52,843 copying build/lib/funvip/src/__pycache__/ext.cpython-39.pyc -> build/bdist.linux-armv7l/wheel/./funvip/src/__pycache__ 2025-11-25T07:30:52,846 copying build/lib/funvip/main.py -> build/bdist.linux-armv7l/wheel/./funvip 2025-11-25T07:30:52,849 creating build/bdist.linux-armv7l/wheel/funvip/preset 2025-11-25T07:30:52,850 copying build/lib/funvip/preset/accurate.yaml -> build/bdist.linux-armv7l/wheel/./funvip/preset 2025-11-25T07:30:52,851 copying build/lib/funvip/preset/.gitignore -> build/bdist.linux-armv7l/wheel/./funvip/preset 2025-11-25T07:30:52,853 copying build/lib/funvip/preset/fast.yaml -> build/bdist.linux-armv7l/wheel/./funvip/preset 2025-11-25T07:30:52,855 copying build/lib/funvip/__init__.py -> build/bdist.linux-armv7l/wheel/./funvip 2025-11-25T07:30:52,856 running install_egg_info 2025-11-25T07:30:52,862 Copying FunVIP.egg-info to build/bdist.linux-armv7l/wheel/./FunVIP-0.5.7-py3.11.egg-info 2025-11-25T07:30:52,877 running install_scripts 2025-11-25T07:30:52,891 creating build/bdist.linux-armv7l/wheel/funvip-0.5.7.dist-info/WHEEL 2025-11-25T07:30:52,894 creating '/tmp/pip-wheel-25gnqcve/.tmp-a4fy7zz3/funvip-0.5.7-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-11-25T07:30:52,898 adding 'funvip/FunVIP_GUI.py' 2025-11-25T07:30:52,899 adding 'funvip/__init__.py' 2025-11-25T07:30:52,901 adding 'funvip/main.py' 2025-11-25T07:30:52,905 adding 'funvip/data/Option_manager.xlsx' 2025-11-25T07:30:52,906 adding 'funvip/data/__init__.py' 2025-11-25T07:30:52,913 adding 'funvip/data/genus_line.txt' 2025-11-25T07:30:52,920 adding 'funvip/external/MAFFT_LICENSE' 2025-11-25T07:30:55,924 adding 'funvip/external/MAFFT_Windows.zip' 2025-11-25T07:30:56,093 adding 'funvip/external/__init__.py' 2025-11-25T07:30:56,102 adding 'funvip/external/BLAST_Windows/Uninstall-ncbi-blast-2.12.0+.exe' 2025-11-25T07:30:59,525 adding 'funvip/external/BLAST_Windows/bin/blastn.exe' 2025-11-25T07:30:59,644 adding 'funvip/external/BLAST_Windows/bin/cleanup-blastdb-volumes.py' 2025-11-25T07:30:59,646 adding 'funvip/external/BLAST_Windows/bin/get_species_taxids.sh' 2025-11-25T07:30:59,650 adding 'funvip/external/BLAST_Windows/bin/legacy_blast.pl' 2025-11-25T07:31:02,193 adding 'funvip/external/BLAST_Windows/bin/makeblastdb.exe' 2025-11-25T07:31:02,307 adding 'funvip/external/BLAST_Windows/bin/nghttp2.dll' 2025-11-25T07:31:02,313 adding 'funvip/external/BLAST_Windows/bin/update_blastdb.pl' 2025-11-25T07:31:02,315 adding 'funvip/external/BLAST_Windows/doc/README.txt' 2025-11-25T07:31:02,371 adding 'funvip/external/FastTree_Windows/FastTree.exe' 2025-11-25T07:31:02,413 adding 'funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Gblocks.exe' 2025-11-25T07:31:02,417 adding 'funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b/nad3.pir' 2025-11-25T07:31:02,418 adding 'funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b/paths' 2025-11-25T07:31:02,424 adding 'funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation/Gblocks_documentation.html' 2025-11-25T07:31:02,426 adding 'funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cox2.pir' 2025-11-25T07:31:02,429 adding 'funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cytb.pir' 2025-11-25T07:31:02,430 adding 'funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad3.pir' 2025-11-25T07:31:02,433 adding 'funvip/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad5.pir' 2025-11-25T07:31:02,440 adding 'funvip/external/RAxML_Windows/GPL-3.0.txt' 2025-11-25T07:31:02,442 adding 'funvip/external/RAxML_Windows/README' 2025-11-25T07:31:02,731 adding 'funvip/external/RAxML_Windows/raxmlHPC-PTHREADS-AVX2.exe' 2025-11-25T07:31:02,822 adding 'funvip/external/iqtree/example.cf' 2025-11-25T07:31:02,838 adding 'funvip/external/iqtree/example.nex' 2025-11-25T07:31:02,850 adding 'funvip/external/iqtree/example.phy' 2025-11-25T07:31:02,881 adding 'funvip/external/iqtree/models.nex' 2025-11-25T07:31:04,939 adding 'funvip/external/iqtree/bin/iqtree2-click.exe' 2025-11-25T07:31:07,072 adding 'funvip/external/iqtree/bin/iqtree2.exe' 2025-11-25T07:31:07,415 adding 'funvip/external/iqtree/bin/libiomp5md.dll' 2025-11-25T07:31:07,429 adding 'funvip/external/mmseqs_Windows/LICENSE.md' 2025-11-25T07:31:07,432 adding 'funvip/external/mmseqs_Windows/README.md' 2025-11-25T07:31:07,433 adding 'funvip/external/mmseqs_Windows/mmseqs.bat' 2025-11-25T07:31:07,565 adding 'funvip/external/mmseqs_Windows/bin/busybox.exe' 2025-11-25T07:31:07,579 adding 'funvip/external/mmseqs_Windows/bin/cygbz2-1.dll' 2025-11-25T07:31:07,593 adding 'funvip/external/mmseqs_Windows/bin/cyggcc_s-seh-1.dll' 2025-11-25T07:31:07,636 adding 'funvip/external/mmseqs_Windows/bin/cyggomp-1.dll' 2025-11-25T07:31:07,896 adding 'funvip/external/mmseqs_Windows/bin/cygstdc++-6.dll' 2025-11-25T07:31:08,490 adding 'funvip/external/mmseqs_Windows/bin/cygwin1.dll' 2025-11-25T07:31:08,528 adding 'funvip/external/mmseqs_Windows/bin/cygz.dll' 2025-11-25T07:31:11,800 adding 'funvip/external/mmseqs_Windows/bin/mmseqs.exe' 2025-11-25T07:31:11,922 adding 'funvip/external/mmseqs_Windows/examples/QUERY.fasta' 2025-11-25T07:31:11,928 adding 'funvip/external/mmseqs_Windows/matrices/PAM10.out' 2025-11-25T07:31:11,929 adding 'funvip/external/mmseqs_Windows/matrices/PAM100.out' 2025-11-25T07:31:11,931 adding 'funvip/external/mmseqs_Windows/matrices/PAM110.out' 2025-11-25T07:31:11,932 adding 'funvip/external/mmseqs_Windows/matrices/PAM120.out' 2025-11-25T07:31:11,934 adding 'funvip/external/mmseqs_Windows/matrices/PAM130.out' 2025-11-25T07:31:11,936 adding 'funvip/external/mmseqs_Windows/matrices/PAM140.out' 2025-11-25T07:31:11,937 adding 'funvip/external/mmseqs_Windows/matrices/PAM150.out' 2025-11-25T07:31:11,939 adding 'funvip/external/mmseqs_Windows/matrices/PAM160.out' 2025-11-25T07:31:11,940 adding 'funvip/external/mmseqs_Windows/matrices/PAM170.out' 2025-11-25T07:31:11,942 adding 'funvip/external/mmseqs_Windows/matrices/PAM180.out' 2025-11-25T07:31:11,943 adding 'funvip/external/mmseqs_Windows/matrices/PAM190.out' 2025-11-25T07:31:11,945 adding 'funvip/external/mmseqs_Windows/matrices/PAM20.out' 2025-11-25T07:31:11,947 adding 'funvip/external/mmseqs_Windows/matrices/PAM30.out' 2025-11-25T07:31:11,948 adding 'funvip/external/mmseqs_Windows/matrices/PAM40.out' 2025-11-25T07:31:11,950 adding 'funvip/external/mmseqs_Windows/matrices/PAM50.out' 2025-11-25T07:31:11,952 adding 'funvip/external/mmseqs_Windows/matrices/PAM60.out' 2025-11-25T07:31:11,953 adding 'funvip/external/mmseqs_Windows/matrices/PAM70.out' 2025-11-25T07:31:11,955 adding 'funvip/external/mmseqs_Windows/matrices/PAM80.out' 2025-11-25T07:31:11,956 adding 'funvip/external/mmseqs_Windows/matrices/PAM90.out' 2025-11-25T07:31:11,958 adding 'funvip/external/mmseqs_Windows/matrices/VTML10.out' 2025-11-25T07:31:11,959 adding 'funvip/external/mmseqs_Windows/matrices/VTML120.out' 2025-11-25T07:31:11,961 adding 'funvip/external/mmseqs_Windows/matrices/VTML160.out' 2025-11-25T07:31:11,963 adding 'funvip/external/mmseqs_Windows/matrices/VTML20.out' 2025-11-25T07:31:11,964 adding 'funvip/external/mmseqs_Windows/matrices/VTML40.out' 2025-11-25T07:31:11,966 adding 'funvip/external/mmseqs_Windows/matrices/VTML80.out' 2025-11-25T07:31:11,968 adding 'funvip/external/mmseqs_Windows/matrices/blosum100.out' 2025-11-25T07:31:11,969 adding 'funvip/external/mmseqs_Windows/matrices/blosum30.out' 2025-11-25T07:31:11,971 adding 'funvip/external/mmseqs_Windows/matrices/blosum35.out' 2025-11-25T07:31:11,973 adding 'funvip/external/mmseqs_Windows/matrices/blosum40.out' 2025-11-25T07:31:11,975 adding 'funvip/external/mmseqs_Windows/matrices/blosum45.out' 2025-11-25T07:31:11,976 adding 'funvip/external/mmseqs_Windows/matrices/blosum50.out' 2025-11-25T07:31:11,978 adding 'funvip/external/mmseqs_Windows/matrices/blosum55.out' 2025-11-25T07:31:11,980 adding 'funvip/external/mmseqs_Windows/matrices/blosum60.out' 2025-11-25T07:31:11,982 adding 'funvip/external/mmseqs_Windows/matrices/blosum62.out' 2025-11-25T07:31:11,983 adding 'funvip/external/mmseqs_Windows/matrices/blosum65.out' 2025-11-25T07:31:11,985 adding 'funvip/external/mmseqs_Windows/matrices/blosum70.out' 2025-11-25T07:31:11,987 adding 'funvip/external/mmseqs_Windows/matrices/blosum75.out' 2025-11-25T07:31:11,989 adding 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2025-11-25T07:31:39,882 Building wheel for funvip (pyproject.toml): finished with status 'done' 2025-11-25T07:31:41,333 Created wheel for funvip: filename=funvip-0.5.7-py3-none-any.whl size=64487519 sha256=7ca6feb5ee2610c0bb2c436914413af0a28bf05e64bdc2f09f534fa3c7a713eb 2025-11-25T07:31:41,335 Stored in directory: /tmp/pip-ephem-wheel-cache-_p6izfuj/wheels/24/54/0f/80ed4d33366de5cb6f104dfd072be4b69cc950713b68f6ab80 2025-11-25T07:31:41,373 Successfully built funvip 2025-11-25T07:31:43,673 Removed build tracker: '/tmp/pip-build-tracker-wj43x56_'