2025-11-27T11:02:25,025 Created temporary directory: /tmp/pip-ephem-wheel-cache-gqst7szq 2025-11-27T11:02:25,026 Created temporary directory: /tmp/pip-build-tracker-ept_p9x1 2025-11-27T11:02:25,027 Initialized build tracking at /tmp/pip-build-tracker-ept_p9x1 2025-11-27T11:02:25,027 Created build tracker: /tmp/pip-build-tracker-ept_p9x1 2025-11-27T11:02:25,028 Entered build tracker: /tmp/pip-build-tracker-ept_p9x1 2025-11-27T11:02:25,029 Created temporary directory: /tmp/pip-wheel-yq2ctzcc 2025-11-27T11:02:25,032 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2025-11-27T11:02:25,034 Created temporary directory: /tmp/pip-ephem-wheel-cache-vto1_uu7 2025-11-27T11:02:25,055 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-11-27T11:02:25,059 2 location(s) to search for versions of nuxl-rescore: 2025-11-27T11:02:25,059 * https://pypi.org/simple/nuxl-rescore/ 2025-11-27T11:02:25,059 * https://www.piwheels.org/simple/nuxl-rescore/ 2025-11-27T11:02:25,060 Fetching project page and analyzing links: https://pypi.org/simple/nuxl-rescore/ 2025-11-27T11:02:25,060 Getting page https://pypi.org/simple/nuxl-rescore/ 2025-11-27T11:02:25,062 Found index url https://pypi.org/simple 2025-11-27T11:02:25,288 Fetched page https://pypi.org/simple/nuxl-rescore/ as application/vnd.pypi.simple.v1+json 2025-11-27T11:02:25,289 Skipping link: No binaries permitted for nuxl-rescore: https://files.pythonhosted.org/packages/39/3d/2a2232fff41a6d8fff18c9a37a72b1330af8b98c8f51bcd1eb12fcbc86cb/nuxl_rescore-0.1.0-py3-none-any.whl (from https://pypi.org/simple/nuxl-rescore/) (requires-python:>=3.10) 2025-11-27T11:02:25,290 Found link https://files.pythonhosted.org/packages/25/5e/75ad5727e70a23b35018585b62ece7a100e3517bcedbde77c88bb06357b7/nuxl_rescore-0.1.0.tar.gz (from https://pypi.org/simple/nuxl-rescore/) (requires-python:>=3.10), version: 0.1.0 2025-11-27T11:02:25,291 Fetching project page and analyzing links: https://www.piwheels.org/simple/nuxl-rescore/ 2025-11-27T11:02:25,292 Getting page https://www.piwheels.org/simple/nuxl-rescore/ 2025-11-27T11:02:25,293 Found index url https://www.piwheels.org/simple 2025-11-27T11:02:25,455 Fetched page https://www.piwheels.org/simple/nuxl-rescore/ as text/html 2025-11-27T11:02:25,456 Skipping link: not a file: https://www.piwheels.org/simple/nuxl-rescore/ 2025-11-27T11:02:25,457 Skipping link: not a file: https://pypi.org/simple/nuxl-rescore/ 2025-11-27T11:02:25,475 Given no hashes to check 1 links for project 'nuxl-rescore': discarding no candidates 2025-11-27T11:02:25,493 Collecting nuxl-rescore==0.1.0 2025-11-27T11:02:25,495 Created temporary directory: /tmp/pip-unpack-txrnq4p5 2025-11-27T11:02:25,707 Downloading nuxl_rescore-0.1.0.tar.gz (36 kB) 2025-11-27T11:02:25,785 Added nuxl-rescore==0.1.0 from https://files.pythonhosted.org/packages/25/5e/75ad5727e70a23b35018585b62ece7a100e3517bcedbde77c88bb06357b7/nuxl_rescore-0.1.0.tar.gz to build tracker '/tmp/pip-build-tracker-ept_p9x1' 2025-11-27T11:02:25,790 Created temporary directory: /tmp/pip-build-env-llzknhk8 2025-11-27T11:02:25,794 Installing build dependencies: started 2025-11-27T11:02:25,795 Running command pip subprocess to install build dependencies 2025-11-27T11:02:26,911 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2025-11-27T11:02:27,534 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2025-11-27T11:02:27,557 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-11-27T11:02:29,311 Collecting setuptools 2025-11-27T11:02:29,423 Using cached https://www.piwheels.org/simple/setuptools/setuptools-80.9.0-py3-none-any.whl (1.2 MB) 2025-11-27T11:02:32,324 Installing collected packages: setuptools 2025-11-27T11:02:35,850 Successfully installed setuptools-80.9.0 2025-11-27T11:02:36,114 Installing build dependencies: finished with status 'done' 2025-11-27T11:02:36,120 Getting requirements to build wheel: started 2025-11-27T11:02:36,121 Running command Getting requirements to build wheel 2025-11-27T11:02:36,727 /tmp/pip-build-env-llzknhk8/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2025-11-27T11:02:36,727 !! 2025-11-27T11:02:36,728 ******************************************************************************** 2025-11-27T11:02:36,729 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2025-11-27T11:02:36,730 By 2026-Feb-18, you need to update your project and remove deprecated calls 2025-11-27T11:02:36,730 or your builds will no longer be supported. 2025-11-27T11:02:36,731 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-11-27T11:02:36,732 ******************************************************************************** 2025-11-27T11:02:36,733 !! 2025-11-27T11:02:36,733 corresp(dist, value, root_dir) 2025-11-27T11:02:36,825 running egg_info 2025-11-27T11:02:36,832 writing nuxl_rescore.egg-info/PKG-INFO 2025-11-27T11:02:36,836 writing dependency_links to nuxl_rescore.egg-info/dependency_links.txt 2025-11-27T11:02:36,838 writing entry points to nuxl_rescore.egg-info/entry_points.txt 2025-11-27T11:02:36,839 writing requirements to nuxl_rescore.egg-info/requires.txt 2025-11-27T11:02:36,841 writing top-level names to nuxl_rescore.egg-info/top_level.txt 2025-11-27T11:02:36,862 reading manifest file 'nuxl_rescore.egg-info/SOURCES.txt' 2025-11-27T11:02:36,865 reading manifest template 'MANIFEST.in' 2025-11-27T11:02:36,866 warning: no directories found matching 'nuxl_rescore/unimod' 2025-11-27T11:02:36,866 adding license file 'LICENSE' 2025-11-27T11:02:36,869 writing manifest file 'nuxl_rescore.egg-info/SOURCES.txt' 2025-11-27T11:02:36,965 Getting requirements to build wheel: finished with status 'done' 2025-11-27T11:02:36,969 Created temporary directory: /tmp/pip-modern-metadata-kryxn_gh 2025-11-27T11:02:36,971 Preparing metadata (pyproject.toml): started 2025-11-27T11:02:36,972 Running command Preparing metadata (pyproject.toml) 2025-11-27T11:02:37,558 /tmp/pip-build-env-llzknhk8/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2025-11-27T11:02:37,558 !! 2025-11-27T11:02:37,559 ******************************************************************************** 2025-11-27T11:02:37,560 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2025-11-27T11:02:37,561 By 2026-Feb-18, you need to update your project and remove deprecated calls 2025-11-27T11:02:37,561 or your builds will no longer be supported. 2025-11-27T11:02:37,563 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-11-27T11:02:37,563 ******************************************************************************** 2025-11-27T11:02:37,565 !! 2025-11-27T11:02:37,565 corresp(dist, value, root_dir) 2025-11-27T11:02:37,653 running dist_info 2025-11-27T11:02:37,665 creating /tmp/pip-modern-metadata-kryxn_gh/nuxl_rescore.egg-info 2025-11-27T11:02:37,666 writing /tmp/pip-modern-metadata-kryxn_gh/nuxl_rescore.egg-info/PKG-INFO 2025-11-27T11:02:37,671 writing dependency_links to /tmp/pip-modern-metadata-kryxn_gh/nuxl_rescore.egg-info/dependency_links.txt 2025-11-27T11:02:37,673 writing entry points to /tmp/pip-modern-metadata-kryxn_gh/nuxl_rescore.egg-info/entry_points.txt 2025-11-27T11:02:37,674 writing requirements to /tmp/pip-modern-metadata-kryxn_gh/nuxl_rescore.egg-info/requires.txt 2025-11-27T11:02:37,675 writing top-level names to /tmp/pip-modern-metadata-kryxn_gh/nuxl_rescore.egg-info/top_level.txt 2025-11-27T11:02:37,677 writing manifest file '/tmp/pip-modern-metadata-kryxn_gh/nuxl_rescore.egg-info/SOURCES.txt' 2025-11-27T11:02:37,696 reading manifest file '/tmp/pip-modern-metadata-kryxn_gh/nuxl_rescore.egg-info/SOURCES.txt' 2025-11-27T11:02:37,698 reading manifest template 'MANIFEST.in' 2025-11-27T11:02:37,699 warning: no directories found matching 'nuxl_rescore/unimod' 2025-11-27T11:02:37,699 adding license file 'LICENSE' 2025-11-27T11:02:37,702 writing manifest file '/tmp/pip-modern-metadata-kryxn_gh/nuxl_rescore.egg-info/SOURCES.txt' 2025-11-27T11:02:37,703 creating '/tmp/pip-modern-metadata-kryxn_gh/nuxl_rescore-0.1.0.dist-info' 2025-11-27T11:02:37,827 Preparing metadata (pyproject.toml): finished with status 'done' 2025-11-27T11:02:37,834 Source in /tmp/pip-wheel-yq2ctzcc/nuxl-rescore_4fa94ae5eb854b1dba52ae71a8f905e7 has version 0.1.0, which satisfies requirement nuxl-rescore==0.1.0 from https://files.pythonhosted.org/packages/25/5e/75ad5727e70a23b35018585b62ece7a100e3517bcedbde77c88bb06357b7/nuxl_rescore-0.1.0.tar.gz 2025-11-27T11:02:37,835 Removed nuxl-rescore==0.1.0 from https://files.pythonhosted.org/packages/25/5e/75ad5727e70a23b35018585b62ece7a100e3517bcedbde77c88bb06357b7/nuxl_rescore-0.1.0.tar.gz from build tracker '/tmp/pip-build-tracker-ept_p9x1' 2025-11-27T11:02:37,846 Created temporary directory: /tmp/pip-unpack-ujce5mzy 2025-11-27T11:02:37,846 Building wheels for collected packages: nuxl-rescore 2025-11-27T11:02:37,850 Created temporary directory: /tmp/pip-wheel-6z_7891a 2025-11-27T11:02:37,851 Destination directory: /tmp/pip-wheel-6z_7891a 2025-11-27T11:02:37,854 Building wheel for nuxl-rescore (pyproject.toml): started 2025-11-27T11:02:37,855 Running command Building wheel for nuxl-rescore (pyproject.toml) 2025-11-27T11:02:38,416 /tmp/pip-build-env-llzknhk8/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2025-11-27T11:02:38,417 !! 2025-11-27T11:02:38,418 ******************************************************************************** 2025-11-27T11:02:38,418 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2025-11-27T11:02:38,420 By 2026-Feb-18, you need to update your project and remove deprecated calls 2025-11-27T11:02:38,420 or your builds will no longer be supported. 2025-11-27T11:02:38,421 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-11-27T11:02:38,422 ******************************************************************************** 2025-11-27T11:02:38,423 !! 2025-11-27T11:02:38,424 corresp(dist, value, root_dir) 2025-11-27T11:02:38,502 running bdist_wheel 2025-11-27T11:02:38,522 running build 2025-11-27T11:02:38,523 running build_py 2025-11-27T11:02:38,529 creating build/lib/nuxl_rescore 2025-11-27T11:02:38,532 copying nuxl_rescore/run.py -> build/lib/nuxl_rescore 2025-11-27T11:02:38,534 copying nuxl_rescore/RT_features.py -> build/lib/nuxl_rescore 2025-11-27T11:02:38,536 copying nuxl_rescore/argparser.py -> build/lib/nuxl_rescore 2025-11-27T11:02:38,538 copying nuxl_rescore/idXML2df.py -> build/lib/nuxl_rescore 2025-11-27T11:02:38,540 copying nuxl_rescore/FDR_calculation.py -> build/lib/nuxl_rescore 2025-11-27T11:02:38,542 copying nuxl_rescore/Data_parser.py -> build/lib/nuxl_rescore 2025-11-27T11:02:38,545 copying nuxl_rescore/entrapment.py -> build/lib/nuxl_rescore 2025-11-27T11:02:38,547 copying nuxl_rescore/__init__.py -> build/lib/nuxl_rescore 2025-11-27T11:02:38,548 copying nuxl_rescore/plotting.py -> build/lib/nuxl_rescore 2025-11-27T11:02:38,551 copying nuxl_rescore/ms2pip_features.py -> build/lib/nuxl_rescore 2025-11-27T11:02:38,553 copying nuxl_rescore/NA_Encoding.py -> build/lib/nuxl_rescore 2025-11-27T11:02:38,555 running egg_info 2025-11-27T11:02:38,566 writing nuxl_rescore.egg-info/PKG-INFO 2025-11-27T11:02:38,570 writing dependency_links to nuxl_rescore.egg-info/dependency_links.txt 2025-11-27T11:02:38,571 writing entry points to nuxl_rescore.egg-info/entry_points.txt 2025-11-27T11:02:38,573 writing requirements to nuxl_rescore.egg-info/requires.txt 2025-11-27T11:02:38,574 writing top-level names to nuxl_rescore.egg-info/top_level.txt 2025-11-27T11:02:38,583 reading manifest file 'nuxl_rescore.egg-info/SOURCES.txt' 2025-11-27T11:02:38,586 reading manifest template 'MANIFEST.in' 2025-11-27T11:02:38,587 warning: no directories found matching 'nuxl_rescore/unimod' 2025-11-27T11:02:38,587 adding license file 'LICENSE' 2025-11-27T11:02:38,590 writing manifest file 'nuxl_rescore.egg-info/SOURCES.txt' 2025-11-27T11:02:38,603 installing to build/bdist.linux-armv7l/wheel 2025-11-27T11:02:38,603 running install 2025-11-27T11:02:38,627 running install_lib 2025-11-27T11:02:38,634 creating build/bdist.linux-armv7l/wheel 2025-11-27T11:02:38,636 creating build/bdist.linux-armv7l/wheel/nuxl_rescore 2025-11-27T11:02:38,637 copying build/lib/nuxl_rescore/run.py -> build/bdist.linux-armv7l/wheel/./nuxl_rescore 2025-11-27T11:02:38,639 copying build/lib/nuxl_rescore/RT_features.py -> build/bdist.linux-armv7l/wheel/./nuxl_rescore 2025-11-27T11:02:38,641 copying build/lib/nuxl_rescore/argparser.py -> build/bdist.linux-armv7l/wheel/./nuxl_rescore 2025-11-27T11:02:38,643 copying build/lib/nuxl_rescore/idXML2df.py -> build/bdist.linux-armv7l/wheel/./nuxl_rescore 2025-11-27T11:02:38,645 copying build/lib/nuxl_rescore/FDR_calculation.py -> build/bdist.linux-armv7l/wheel/./nuxl_rescore 2025-11-27T11:02:38,647 copying build/lib/nuxl_rescore/Data_parser.py -> build/bdist.linux-armv7l/wheel/./nuxl_rescore 2025-11-27T11:02:38,650 copying build/lib/nuxl_rescore/entrapment.py -> build/bdist.linux-armv7l/wheel/./nuxl_rescore 2025-11-27T11:02:38,652 copying build/lib/nuxl_rescore/__init__.py -> build/bdist.linux-armv7l/wheel/./nuxl_rescore 2025-11-27T11:02:38,653 copying build/lib/nuxl_rescore/plotting.py -> build/bdist.linux-armv7l/wheel/./nuxl_rescore 2025-11-27T11:02:38,656 copying build/lib/nuxl_rescore/ms2pip_features.py -> build/bdist.linux-armv7l/wheel/./nuxl_rescore 2025-11-27T11:02:38,659 copying build/lib/nuxl_rescore/NA_Encoding.py -> build/bdist.linux-armv7l/wheel/./nuxl_rescore 2025-11-27T11:02:38,661 running install_egg_info 2025-11-27T11:02:38,667 Copying nuxl_rescore.egg-info to build/bdist.linux-armv7l/wheel/./nuxl_rescore-0.1.0-py3.11.egg-info 2025-11-27T11:02:38,679 running install_scripts 2025-11-27T11:02:38,692 creating build/bdist.linux-armv7l/wheel/nuxl_rescore-0.1.0.dist-info/WHEEL 2025-11-27T11:02:38,695 creating '/tmp/pip-wheel-6z_7891a/.tmp-mm6d7pm7/nuxl_rescore-0.1.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-11-27T11:02:38,699 adding 'nuxl_rescore/Data_parser.py' 2025-11-27T11:02:38,700 adding 'nuxl_rescore/FDR_calculation.py' 2025-11-27T11:02:38,702 adding 'nuxl_rescore/NA_Encoding.py' 2025-11-27T11:02:38,704 adding 'nuxl_rescore/RT_features.py' 2025-11-27T11:02:38,705 adding 'nuxl_rescore/__init__.py' 2025-11-27T11:02:38,707 adding 'nuxl_rescore/argparser.py' 2025-11-27T11:02:38,709 adding 'nuxl_rescore/entrapment.py' 2025-11-27T11:02:38,710 adding 'nuxl_rescore/idXML2df.py' 2025-11-27T11:02:38,712 adding 'nuxl_rescore/ms2pip_features.py' 2025-11-27T11:02:38,714 adding 'nuxl_rescore/plotting.py' 2025-11-27T11:02:38,716 adding 'nuxl_rescore/run.py' 2025-11-27T11:02:38,719 adding 'nuxl_rescore-0.1.0.dist-info/licenses/LICENSE' 2025-11-27T11:02:38,723 adding 'nuxl_rescore-0.1.0.dist-info/METADATA' 2025-11-27T11:02:38,724 adding 'nuxl_rescore-0.1.0.dist-info/WHEEL' 2025-11-27T11:02:38,724 adding 'nuxl_rescore-0.1.0.dist-info/entry_points.txt' 2025-11-27T11:02:38,725 adding 'nuxl_rescore-0.1.0.dist-info/top_level.txt' 2025-11-27T11:02:38,726 adding 'nuxl_rescore-0.1.0.dist-info/RECORD' 2025-11-27T11:02:38,728 removing build/bdist.linux-armv7l/wheel 2025-11-27T11:02:38,830 Building wheel for nuxl-rescore (pyproject.toml): finished with status 'done' 2025-11-27T11:02:38,835 Created wheel for nuxl-rescore: filename=nuxl_rescore-0.1.0-py3-none-any.whl size=34840 sha256=d6a87a43cfc246994d317b7ef07dc42cd54e5c4e6ff961ed17d2056720f569c9 2025-11-27T11:02:38,836 Stored in directory: /tmp/pip-ephem-wheel-cache-vto1_uu7/wheels/eb/c3/a2/3397a13acda9e2112f1034797d0eda5606371c2fe4daa4d73c 2025-11-27T11:02:38,854 Successfully built nuxl-rescore 2025-11-27T11:02:38,858 Removed build tracker: '/tmp/pip-build-tracker-ept_p9x1'