2025-11-28T12:35:45,474 Created temporary directory: /tmp/pip-ephem-wheel-cache-6hw8e7j4 2025-11-28T12:35:45,476 Created temporary directory: /tmp/pip-build-tracker-iu_e9zmb 2025-11-28T12:35:45,477 Initialized build tracking at /tmp/pip-build-tracker-iu_e9zmb 2025-11-28T12:35:45,477 Created build tracker: /tmp/pip-build-tracker-iu_e9zmb 2025-11-28T12:35:45,478 Entered build tracker: /tmp/pip-build-tracker-iu_e9zmb 2025-11-28T12:35:45,478 Created temporary directory: /tmp/pip-wheel-8fyefmlm 2025-11-28T12:35:45,482 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2025-11-28T12:35:45,484 Created temporary directory: /tmp/pip-ephem-wheel-cache-drr0rav4 2025-11-28T12:35:45,508 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-11-28T12:35:45,511 2 location(s) to search for versions of py-semtools: 2025-11-28T12:35:45,511 * https://pypi.org/simple/py-semtools/ 2025-11-28T12:35:45,511 * https://www.piwheels.org/simple/py-semtools/ 2025-11-28T12:35:45,512 Fetching project page and analyzing links: https://pypi.org/simple/py-semtools/ 2025-11-28T12:35:45,513 Getting page https://pypi.org/simple/py-semtools/ 2025-11-28T12:35:45,514 Found index url https://pypi.org/simple 2025-11-28T12:35:45,729 Fetched page https://pypi.org/simple/py-semtools/ as application/vnd.pypi.simple.v1+json 2025-11-28T12:35:45,731 Skipping link: No binaries permitted for py-semtools: https://files.pythonhosted.org/packages/9e/91/d3dcbccb20de4901a7c17a89e484805f6eb931fd94997ee4a6371274ad54/py_semtools-1.0.0-py3-none-any.whl (from https://pypi.org/simple/py-semtools/) 2025-11-28T12:35:45,732 Found link https://files.pythonhosted.org/packages/92/99/7c7b949ff077f199d9860c6e18208898730c91a5ed4067648d59803660c9/py_semtools-1.0.0.tar.gz (from https://pypi.org/simple/py-semtools/), version: 1.0.0 2025-11-28T12:35:45,733 Skipping link: No binaries permitted for py-semtools: https://files.pythonhosted.org/packages/03/91/07795e2c37bf072331b1929b1e5d9f3efda5c6ad9b681646a57db3d877c3/py_semtools-1.0.1-py3-none-any.whl (from https://pypi.org/simple/py-semtools/) 2025-11-28T12:35:45,734 Found link https://files.pythonhosted.org/packages/20/5a/cd42c5bce40fe864eee951abea020789308e4c918cf468e8be8b9efdfb9b/py_semtools-1.0.1.tar.gz (from https://pypi.org/simple/py-semtools/), version: 1.0.1 2025-11-28T12:35:45,734 Skipping link: No binaries permitted for py-semtools: https://files.pythonhosted.org/packages/ae/8a/5ba9e4b8670a8d925f8ee52ccf997f87c53d2d6a69b27c4ad76392ac17c1/py_semtools-1.2.1-py3-none-any.whl (from https://pypi.org/simple/py-semtools/) 2025-11-28T12:35:45,735 Found link https://files.pythonhosted.org/packages/b4/84/87d081d03ef3e4a62528ae0926e2a34f8ca7cd10e1f578d5c4bf49e6ee45/py_semtools-1.2.1.tar.gz (from https://pypi.org/simple/py-semtools/), version: 1.2.1 2025-11-28T12:35:45,736 Skipping link: No binaries permitted for py-semtools: https://files.pythonhosted.org/packages/95/60/c813d5bd83c47fb4626f08d560fe56a7d1dd814494cfddf8c3e5ed0a0fe0/py_semtools-1.3-py3-none-any.whl (from https://pypi.org/simple/py-semtools/) 2025-11-28T12:35:45,736 Found link https://files.pythonhosted.org/packages/11/4a/e1302ebdac699b7160f04425568ab11f0a54d87f4eaf0ccc09eb5c62f571/py_semtools-1.3.tar.gz (from https://pypi.org/simple/py-semtools/), version: 1.3 2025-11-28T12:35:45,737 Fetching project page and analyzing links: https://www.piwheels.org/simple/py-semtools/ 2025-11-28T12:35:45,738 Getting page https://www.piwheels.org/simple/py-semtools/ 2025-11-28T12:35:45,739 Found index url https://www.piwheels.org/simple 2025-11-28T12:35:45,900 Fetched page https://www.piwheels.org/simple/py-semtools/ as text/html 2025-11-28T12:35:45,902 Skipping link: No binaries permitted for py-semtools: https://archive1.piwheels.org/simple/py-semtools/py_semtools-1.2.1-py3-none-any.whl#sha256=213013f51320994c82556ab69f10781b631dac00db9ee0cbfa9089bc6545eb75 (from https://www.piwheels.org/simple/py-semtools/) 2025-11-28T12:35:45,903 Skipping link: No binaries permitted for py-semtools: https://archive1.piwheels.org/simple/py-semtools/py_semtools-1.0.1-py3-none-any.whl#sha256=b8d9c0404cf4d9ecff5ccd2a401fcd13b9a6d8c82e8bddb2a4d816d1b5a84b53 (from https://www.piwheels.org/simple/py-semtools/) 2025-11-28T12:35:45,904 Skipping link: No binaries permitted for py-semtools: https://archive1.piwheels.org/simple/py-semtools/py_semtools-1.0.0-py3-none-any.whl#sha256=ac317638b1ee685f80cf79ff3cf9fba3766e6b6cd754a6575d5bb634d446d14c (from https://www.piwheels.org/simple/py-semtools/) 2025-11-28T12:35:45,905 Skipping link: not a file: https://www.piwheels.org/simple/py-semtools/ 2025-11-28T12:35:45,905 Skipping link: not a file: https://pypi.org/simple/py-semtools/ 2025-11-28T12:35:45,926 Given no hashes to check 1 links for project 'py-semtools': discarding no candidates 2025-11-28T12:35:45,945 Collecting py-semtools==1.3 2025-11-28T12:35:45,948 Created temporary directory: /tmp/pip-unpack-bfci_o88 2025-11-28T12:35:46,086 Downloading py_semtools-1.3.tar.gz (7.9 MB) 2025-11-28T12:35:48,184 Added py-semtools==1.3 from https://files.pythonhosted.org/packages/11/4a/e1302ebdac699b7160f04425568ab11f0a54d87f4eaf0ccc09eb5c62f571/py_semtools-1.3.tar.gz to build tracker '/tmp/pip-build-tracker-iu_e9zmb' 2025-11-28T12:35:48,189 Created temporary directory: /tmp/pip-build-env-ltflgwzp 2025-11-28T12:35:48,194 Installing build dependencies: started 2025-11-28T12:35:48,196 Running command pip subprocess to install build dependencies 2025-11-28T12:35:49,321 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2025-11-28T12:35:49,927 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2025-11-28T12:35:49,951 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-11-28T12:35:51,742 Collecting setuptools>=46.1.0 2025-11-28T12:35:51,876 Using cached https://www.piwheels.org/simple/setuptools/setuptools-80.9.0-py3-none-any.whl (1.2 MB) 2025-11-28T12:35:52,267 Collecting setuptools_scm[toml]>=5 2025-11-28T12:35:52,284 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-9.2.2-py3-none-any.whl (62 kB) 2025-11-28T12:35:52,473 Collecting packaging>=20 2025-11-28T12:35:52,489 Using cached https://www.piwheels.org/simple/packaging/packaging-25.0-py3-none-any.whl (66 kB) 2025-11-28T12:35:55,395 Installing collected packages: setuptools, packaging, setuptools_scm 2025-11-28T12:35:59,366 Creating /tmp/pip-build-env-ltflgwzp/overlay/local/bin 2025-11-28T12:35:59,368 changing mode of /tmp/pip-build-env-ltflgwzp/overlay/local/bin/setuptools-scm to 755 2025-11-28T12:35:59,391 Successfully installed packaging-25.0 setuptools-80.9.0 setuptools_scm-9.2.2 2025-11-28T12:35:59,673 Installing build dependencies: finished with status 'done' 2025-11-28T12:35:59,680 Getting requirements to build wheel: started 2025-11-28T12:35:59,681 Running command Getting requirements to build wheel 2025-11-28T12:36:00,331 /tmp/pip-build-env-ltflgwzp/overlay/local/lib/python3.11/dist-packages/setuptools_scm/_integration/version_inference.py:51: UserWarning: version of py_semtools already set 2025-11-28T12:36:00,331 warnings.warn(self.message) 2025-11-28T12:36:00,367 running egg_info 2025-11-28T12:36:00,376 writing src/py_semtools.egg-info/PKG-INFO 2025-11-28T12:36:00,380 writing dependency_links to src/py_semtools.egg-info/dependency_links.txt 2025-11-28T12:36:00,383 writing entry points to src/py_semtools.egg-info/entry_points.txt 2025-11-28T12:36:00,386 writing requirements to src/py_semtools.egg-info/requires.txt 2025-11-28T12:36:00,387 writing top-level names to src/py_semtools.egg-info/top_level.txt 2025-11-28T12:36:00,455 listing git files failed - pretending there aren't any 2025-11-28T12:36:00,460 reading manifest file 'src/py_semtools.egg-info/SOURCES.txt' 2025-11-28T12:36:00,491 reading manifest template 'MANIFEST.in' 2025-11-28T12:36:00,493 warning: no files found matching 'py_semtools/external_data/ontologies.txt' 2025-11-28T12:36:00,493 adding license file 'LICENSE.txt' 2025-11-28T12:36:00,501 writing manifest file 'src/py_semtools.egg-info/SOURCES.txt' 2025-11-28T12:36:00,595 Getting requirements to build wheel: finished with status 'done' 2025-11-28T12:36:00,598 Created temporary directory: /tmp/pip-modern-metadata-hhouy3kb 2025-11-28T12:36:00,600 Preparing metadata (pyproject.toml): started 2025-11-28T12:36:00,601 Running command Preparing metadata (pyproject.toml) 2025-11-28T12:36:01,195 /tmp/pip-build-env-ltflgwzp/overlay/local/lib/python3.11/dist-packages/setuptools_scm/_integration/version_inference.py:51: UserWarning: version of py_semtools already set 2025-11-28T12:36:01,195 warnings.warn(self.message) 2025-11-28T12:36:01,236 running dist_info 2025-11-28T12:36:01,251 creating /tmp/pip-modern-metadata-hhouy3kb/py_semtools.egg-info 2025-11-28T12:36:01,251 writing /tmp/pip-modern-metadata-hhouy3kb/py_semtools.egg-info/PKG-INFO 2025-11-28T12:36:01,256 writing dependency_links to /tmp/pip-modern-metadata-hhouy3kb/py_semtools.egg-info/dependency_links.txt 2025-11-28T12:36:01,258 writing entry points to /tmp/pip-modern-metadata-hhouy3kb/py_semtools.egg-info/entry_points.txt 2025-11-28T12:36:01,261 writing requirements to /tmp/pip-modern-metadata-hhouy3kb/py_semtools.egg-info/requires.txt 2025-11-28T12:36:01,262 writing top-level names to /tmp/pip-modern-metadata-hhouy3kb/py_semtools.egg-info/top_level.txt 2025-11-28T12:36:01,263 writing manifest file '/tmp/pip-modern-metadata-hhouy3kb/py_semtools.egg-info/SOURCES.txt' 2025-11-28T12:36:01,325 listing git files failed - pretending there aren't any 2025-11-28T12:36:01,330 reading manifest file '/tmp/pip-modern-metadata-hhouy3kb/py_semtools.egg-info/SOURCES.txt' 2025-11-28T12:36:01,332 reading manifest template 'MANIFEST.in' 2025-11-28T12:36:01,333 warning: no files found matching 'py_semtools/external_data/ontologies.txt' 2025-11-28T12:36:01,334 adding license file 'LICENSE.txt' 2025-11-28T12:36:01,337 writing manifest file '/tmp/pip-modern-metadata-hhouy3kb/py_semtools.egg-info/SOURCES.txt' 2025-11-28T12:36:01,338 creating '/tmp/pip-modern-metadata-hhouy3kb/py_semtools-1.3.dist-info' 2025-11-28T12:36:01,477 Preparing metadata (pyproject.toml): finished with status 'done' 2025-11-28T12:36:01,481 Source in /tmp/pip-wheel-8fyefmlm/py-semtools_e1bf3bed7a7741e6864f6175ca2546af has version 1.3, which satisfies requirement py-semtools==1.3 from https://files.pythonhosted.org/packages/11/4a/e1302ebdac699b7160f04425568ab11f0a54d87f4eaf0ccc09eb5c62f571/py_semtools-1.3.tar.gz 2025-11-28T12:36:01,482 Removed py-semtools==1.3 from https://files.pythonhosted.org/packages/11/4a/e1302ebdac699b7160f04425568ab11f0a54d87f4eaf0ccc09eb5c62f571/py_semtools-1.3.tar.gz from build tracker '/tmp/pip-build-tracker-iu_e9zmb' 2025-11-28T12:36:01,486 Created temporary directory: /tmp/pip-unpack-fcloifau 2025-11-28T12:36:01,487 Building wheels for collected packages: py-semtools 2025-11-28T12:36:01,491 Created temporary directory: /tmp/pip-wheel-ga15bxi1 2025-11-28T12:36:01,492 Destination directory: /tmp/pip-wheel-ga15bxi1 2025-11-28T12:36:01,494 Building wheel for py-semtools (pyproject.toml): started 2025-11-28T12:36:01,495 Running command Building wheel for py-semtools (pyproject.toml) 2025-11-28T12:36:02,084 /tmp/pip-build-env-ltflgwzp/overlay/local/lib/python3.11/dist-packages/setuptools_scm/_integration/version_inference.py:51: UserWarning: version of py_semtools already set 2025-11-28T12:36:02,084 warnings.warn(self.message) 2025-11-28T12:36:02,130 running bdist_wheel 2025-11-28T12:36:02,165 running build 2025-11-28T12:36:02,166 running build_py 2025-11-28T12:36:02,177 creating build/lib/py_semtools 2025-11-28T12:36:02,180 copying src/py_semtools/main_modules.py -> build/lib/py_semtools 2025-11-28T12:36:02,183 copying src/py_semtools/sim_handler.py -> build/lib/py_semtools 2025-11-28T12:36:02,185 copying src/py_semtools/stEngine.py -> build/lib/py_semtools 2025-11-28T12:36:02,188 copying src/py_semtools/ontology.py -> build/lib/py_semtools 2025-11-28T12:36:02,191 copying src/py_semtools/__init__.py -> build/lib/py_semtools 2025-11-28T12:36:02,193 copying src/py_semtools/report_ont.py -> build/lib/py_semtools 2025-11-28T12:36:02,195 copying src/py_semtools/cli_manager.py -> build/lib/py_semtools 2025-11-28T12:36:02,198 copying src/py_semtools/parallelizer.py -> build/lib/py_semtools 2025-11-28T12:36:02,201 creating build/lib/py_semtools/indexers 2025-11-28T12:36:02,202 copying src/py_semtools/indexers/text_indexer.py -> build/lib/py_semtools/indexers 2025-11-28T12:36:02,205 creating build/lib/py_semtools/parsers/ont 2025-11-28T12:36:02,207 copying src/py_semtools/parsers/ont/file_parser.py -> build/lib/py_semtools/parsers/ont 2025-11-28T12:36:02,209 copying src/py_semtools/parsers/ont/oboparser.py -> build/lib/py_semtools/parsers/ont 2025-11-28T12:36:02,211 copying src/py_semtools/parsers/ont/json_parser.py -> build/lib/py_semtools/parsers/ont 2025-11-28T12:36:02,214 creating build/lib/py_semtools/parsers/text 2025-11-28T12:36:02,215 copying src/py_semtools/parsers/text/text_pubmed_paper_parser.py -> build/lib/py_semtools/parsers/text 2025-11-28T12:36:02,217 copying src/py_semtools/parsers/text/text_basic_parser.py -> build/lib/py_semtools/parsers/text 2025-11-28T12:36:02,219 copying src/py_semtools/parsers/text/text_pubmed_abstract_parser.py -> build/lib/py_semtools/parsers/text 2025-11-28T12:36:02,221 copying src/py_semtools/parsers/text/text_pubmed_parser.py -> build/lib/py_semtools/parsers/text 2025-11-28T12:36:02,224 running egg_info 2025-11-28T12:36:02,238 writing src/py_semtools.egg-info/PKG-INFO 2025-11-28T12:36:02,242 writing dependency_links to src/py_semtools.egg-info/dependency_links.txt 2025-11-28T12:36:02,244 writing entry points to src/py_semtools.egg-info/entry_points.txt 2025-11-28T12:36:02,247 writing requirements to src/py_semtools.egg-info/requires.txt 2025-11-28T12:36:02,248 writing top-level names to src/py_semtools.egg-info/top_level.txt 2025-11-28T12:36:02,292 listing git files failed - pretending there aren't any 2025-11-28T12:36:02,296 reading manifest file 'src/py_semtools.egg-info/SOURCES.txt' 2025-11-28T12:36:02,306 reading manifest template 'MANIFEST.in' 2025-11-28T12:36:02,307 warning: no files found matching 'py_semtools/external_data/ontologies.txt' 2025-11-28T12:36:02,307 adding license file 'LICENSE.txt' 2025-11-28T12:36:02,315 writing manifest file 'src/py_semtools.egg-info/SOURCES.txt' 2025-11-28T12:36:02,325 creating build/lib/py_semtools/external_data 2025-11-28T12:36:02,326 copying src/py_semtools/external_data/ontologies.txt -> build/lib/py_semtools/external_data 2025-11-28T12:36:02,328 creating build/lib/py_semtools/templates 2025-11-28T12:36:02,329 copying src/py_semtools/templates/comorb_sugg.txt -> build/lib/py_semtools/templates 2025-11-28T12:36:02,333 copying src/py_semtools/templates/makeTermFreqTable.txt -> build/lib/py_semtools/templates 2025-11-28T12:36:02,336 copying src/py_semtools/templates/ontoICdist.txt -> build/lib/py_semtools/templates 2025-11-28T12:36:02,339 copying src/py_semtools/templates/ontodist.txt -> build/lib/py_semtools/templates 2025-11-28T12:36:02,342 copying src/py_semtools/templates/ontoplot.txt -> build/lib/py_semtools/templates 2025-11-28T12:36:02,346 copying src/py_semtools/templates/plotClust.txt -> build/lib/py_semtools/templates 2025-11-28T12:36:02,349 copying src/py_semtools/templates/plotProfRed.txt -> build/lib/py_semtools/templates 2025-11-28T12:36:02,352 copying src/py_semtools/templates/report.txt -> build/lib/py_semtools/templates 2025-11-28T12:36:02,356 copying src/py_semtools/templates/similarity_heatmap.txt -> build/lib/py_semtools/templates 2025-11-28T12:36:02,359 copying src/py_semtools/templates/similarity_matrix.txt -> build/lib/py_semtools/templates 2025-11-28T12:36:02,361 copying src/py_semtools/templates/stEngine.txt -> build/lib/py_semtools/templates 2025-11-28T12:36:02,382 installing to build/bdist.linux-armv7l/wheel 2025-11-28T12:36:02,382 running install 2025-11-28T12:36:02,405 running install_lib 2025-11-28T12:36:02,416 creating build/bdist.linux-armv7l/wheel 2025-11-28T12:36:02,419 creating build/bdist.linux-armv7l/wheel/py_semtools 2025-11-28T12:36:02,420 copying build/lib/py_semtools/main_modules.py -> build/bdist.linux-armv7l/wheel/./py_semtools 2025-11-28T12:36:02,424 creating build/bdist.linux-armv7l/wheel/py_semtools/external_data 2025-11-28T12:36:02,426 copying build/lib/py_semtools/external_data/ontologies.txt -> build/bdist.linux-armv7l/wheel/./py_semtools/external_data 2025-11-28T12:36:02,429 creating build/bdist.linux-armv7l/wheel/py_semtools/indexers 2025-11-28T12:36:02,430 copying build/lib/py_semtools/indexers/text_indexer.py -> build/bdist.linux-armv7l/wheel/./py_semtools/indexers 2025-11-28T12:36:02,433 copying build/lib/py_semtools/sim_handler.py -> build/bdist.linux-armv7l/wheel/./py_semtools 2025-11-28T12:36:02,435 copying build/lib/py_semtools/stEngine.py -> build/bdist.linux-armv7l/wheel/./py_semtools 2025-11-28T12:36:02,438 copying build/lib/py_semtools/ontology.py -> build/bdist.linux-armv7l/wheel/./py_semtools 2025-11-28T12:36:02,442 copying build/lib/py_semtools/__init__.py -> build/bdist.linux-armv7l/wheel/./py_semtools 2025-11-28T12:36:02,445 creating build/bdist.linux-armv7l/wheel/py_semtools/parsers 2025-11-28T12:36:02,447 creating build/bdist.linux-armv7l/wheel/py_semtools/parsers/ont 2025-11-28T12:36:02,448 copying build/lib/py_semtools/parsers/ont/file_parser.py -> build/bdist.linux-armv7l/wheel/./py_semtools/parsers/ont 2025-11-28T12:36:02,451 copying build/lib/py_semtools/parsers/ont/oboparser.py -> build/bdist.linux-armv7l/wheel/./py_semtools/parsers/ont 2025-11-28T12:36:02,454 copying build/lib/py_semtools/parsers/ont/json_parser.py -> build/bdist.linux-armv7l/wheel/./py_semtools/parsers/ont 2025-11-28T12:36:02,456 creating build/bdist.linux-armv7l/wheel/py_semtools/parsers/text 2025-11-28T12:36:02,457 copying build/lib/py_semtools/parsers/text/text_pubmed_paper_parser.py -> build/bdist.linux-armv7l/wheel/./py_semtools/parsers/text 2025-11-28T12:36:02,460 copying build/lib/py_semtools/parsers/text/text_basic_parser.py -> build/bdist.linux-armv7l/wheel/./py_semtools/parsers/text 2025-11-28T12:36:02,462 copying build/lib/py_semtools/parsers/text/text_pubmed_abstract_parser.py -> build/bdist.linux-armv7l/wheel/./py_semtools/parsers/text 2025-11-28T12:36:02,465 copying build/lib/py_semtools/parsers/text/text_pubmed_parser.py -> build/bdist.linux-armv7l/wheel/./py_semtools/parsers/text 2025-11-28T12:36:02,467 copying build/lib/py_semtools/report_ont.py -> build/bdist.linux-armv7l/wheel/./py_semtools 2025-11-28T12:36:02,471 creating build/bdist.linux-armv7l/wheel/py_semtools/templates 2025-11-28T12:36:02,472 copying build/lib/py_semtools/templates/plotProfRed.txt -> build/bdist.linux-armv7l/wheel/./py_semtools/templates 2025-11-28T12:36:02,474 copying build/lib/py_semtools/templates/stEngine.txt -> build/bdist.linux-armv7l/wheel/./py_semtools/templates 2025-11-28T12:36:02,476 copying build/lib/py_semtools/templates/plotClust.txt -> build/bdist.linux-armv7l/wheel/./py_semtools/templates 2025-11-28T12:36:02,478 copying build/lib/py_semtools/templates/makeTermFreqTable.txt -> build/bdist.linux-armv7l/wheel/./py_semtools/templates 2025-11-28T12:36:02,480 copying build/lib/py_semtools/templates/report.txt -> build/bdist.linux-armv7l/wheel/./py_semtools/templates 2025-11-28T12:36:02,482 copying build/lib/py_semtools/templates/comorb_sugg.txt -> build/bdist.linux-armv7l/wheel/./py_semtools/templates 2025-11-28T12:36:02,484 copying build/lib/py_semtools/templates/ontoplot.txt -> build/bdist.linux-armv7l/wheel/./py_semtools/templates 2025-11-28T12:36:02,487 copying build/lib/py_semtools/templates/ontodist.txt -> build/bdist.linux-armv7l/wheel/./py_semtools/templates 2025-11-28T12:36:02,489 copying build/lib/py_semtools/templates/similarity_matrix.txt -> build/bdist.linux-armv7l/wheel/./py_semtools/templates 2025-11-28T12:36:02,491 copying build/lib/py_semtools/templates/similarity_heatmap.txt -> build/bdist.linux-armv7l/wheel/./py_semtools/templates 2025-11-28T12:36:02,493 copying build/lib/py_semtools/templates/ontoICdist.txt -> build/bdist.linux-armv7l/wheel/./py_semtools/templates 2025-11-28T12:36:02,495 copying build/lib/py_semtools/cli_manager.py -> build/bdist.linux-armv7l/wheel/./py_semtools 2025-11-28T12:36:02,498 copying build/lib/py_semtools/parallelizer.py -> build/bdist.linux-armv7l/wheel/./py_semtools 2025-11-28T12:36:02,500 running install_egg_info 2025-11-28T12:36:02,511 Copying src/py_semtools.egg-info to build/bdist.linux-armv7l/wheel/./py_semtools-1.3-py3.11.egg-info 2025-11-28T12:36:02,528 running install_scripts 2025-11-28T12:36:02,543 creating build/bdist.linux-armv7l/wheel/py_semtools-1.3.dist-info/WHEEL 2025-11-28T12:36:02,546 creating '/tmp/pip-wheel-ga15bxi1/.tmp-8fp0yz54/py_semtools-1.3-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-11-28T12:36:02,549 adding 'py_semtools/__init__.py' 2025-11-28T12:36:02,553 adding 'py_semtools/cli_manager.py' 2025-11-28T12:36:02,558 adding 'py_semtools/main_modules.py' 2025-11-28T12:36:02,569 adding 'py_semtools/ontology.py' 2025-11-28T12:36:02,571 adding 'py_semtools/parallelizer.py' 2025-11-28T12:36:02,574 adding 'py_semtools/report_ont.py' 2025-11-28T12:36:02,575 adding 'py_semtools/sim_handler.py' 2025-11-28T12:36:02,578 adding 'py_semtools/stEngine.py' 2025-11-28T12:36:02,580 adding 'py_semtools/external_data/ontologies.txt' 2025-11-28T12:36:02,582 adding 'py_semtools/indexers/text_indexer.py' 2025-11-28T12:36:02,584 adding 'py_semtools/parsers/ont/file_parser.py' 2025-11-28T12:36:02,586 adding 'py_semtools/parsers/ont/json_parser.py' 2025-11-28T12:36:02,589 adding 'py_semtools/parsers/ont/oboparser.py' 2025-11-28T12:36:02,591 adding 'py_semtools/parsers/text/text_basic_parser.py' 2025-11-28T12:36:02,592 adding 'py_semtools/parsers/text/text_pubmed_abstract_parser.py' 2025-11-28T12:36:02,594 adding 'py_semtools/parsers/text/text_pubmed_paper_parser.py' 2025-11-28T12:36:02,595 adding 'py_semtools/parsers/text/text_pubmed_parser.py' 2025-11-28T12:36:02,597 adding 'py_semtools/templates/comorb_sugg.txt' 2025-11-28T12:36:02,599 adding 'py_semtools/templates/makeTermFreqTable.txt' 2025-11-28T12:36:02,600 adding 'py_semtools/templates/ontoICdist.txt' 2025-11-28T12:36:02,601 adding 'py_semtools/templates/ontodist.txt' 2025-11-28T12:36:02,603 adding 'py_semtools/templates/ontoplot.txt' 2025-11-28T12:36:02,604 adding 'py_semtools/templates/plotClust.txt' 2025-11-28T12:36:02,605 adding 'py_semtools/templates/plotProfRed.txt' 2025-11-28T12:36:02,606 adding 'py_semtools/templates/report.txt' 2025-11-28T12:36:02,607 adding 'py_semtools/templates/similarity_heatmap.txt' 2025-11-28T12:36:02,609 adding 'py_semtools/templates/similarity_matrix.txt' 2025-11-28T12:36:02,610 adding 'py_semtools/templates/stEngine.txt' 2025-11-28T12:36:02,613 adding 'py_semtools-1.3.dist-info/licenses/LICENSE.txt' 2025-11-28T12:36:02,614 adding 'py_semtools-1.3.dist-info/METADATA' 2025-11-28T12:36:02,615 adding 'py_semtools-1.3.dist-info/WHEEL' 2025-11-28T12:36:02,616 adding 'py_semtools-1.3.dist-info/entry_points.txt' 2025-11-28T12:36:02,616 adding 'py_semtools-1.3.dist-info/top_level.txt' 2025-11-28T12:36:02,618 adding 'py_semtools-1.3.dist-info/RECORD' 2025-11-28T12:36:02,620 removing build/bdist.linux-armv7l/wheel 2025-11-28T12:36:02,729 Building wheel for py-semtools (pyproject.toml): finished with status 'done' 2025-11-28T12:36:02,735 Created wheel for py-semtools: filename=py_semtools-1.3-py3-none-any.whl size=83912 sha256=23f122980bf343c095689e7a3941bc0985138294de2ddfd688259690f1f69945 2025-11-28T12:36:02,737 Stored in directory: /tmp/pip-ephem-wheel-cache-drr0rav4/wheels/5e/c0/cd/130364f2089b75fc2a1ccc51e365f2244c99904b7c2459dbd7 2025-11-28T12:36:02,748 Successfully built py-semtools 2025-11-28T12:36:02,753 Removed build tracker: '/tmp/pip-build-tracker-iu_e9zmb'