2025-12-02T23:13:27,872 Created temporary directory: /tmp/pip-ephem-wheel-cache-r35s26ap 2025-12-02T23:13:27,874 Created temporary directory: /tmp/pip-build-tracker-q7ymrdk0 2025-12-02T23:13:27,875 Initialized build tracking at /tmp/pip-build-tracker-q7ymrdk0 2025-12-02T23:13:27,875 Created build tracker: /tmp/pip-build-tracker-q7ymrdk0 2025-12-02T23:13:27,876 Entered build tracker: /tmp/pip-build-tracker-q7ymrdk0 2025-12-02T23:13:27,877 Created temporary directory: /tmp/pip-wheel-r0h39kn5 2025-12-02T23:13:27,880 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2025-12-02T23:13:27,882 Created temporary directory: /tmp/pip-ephem-wheel-cache-n082xl42 2025-12-02T23:13:27,904 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-12-02T23:13:27,908 2 location(s) to search for versions of phynetpy: 2025-12-02T23:13:27,908 * https://pypi.org/simple/phynetpy/ 2025-12-02T23:13:27,908 * https://www.piwheels.org/simple/phynetpy/ 2025-12-02T23:13:27,908 Fetching project page and analyzing links: https://pypi.org/simple/phynetpy/ 2025-12-02T23:13:27,909 Getting page https://pypi.org/simple/phynetpy/ 2025-12-02T23:13:27,911 Found index url https://pypi.org/simple 2025-12-02T23:13:28,122 Fetched page https://pypi.org/simple/phynetpy/ as application/vnd.pypi.simple.v1+json 2025-12-02T23:13:28,124 Skipping link: No binaries permitted for phynetpy: https://files.pythonhosted.org/packages/ca/09/330fee700fddd31c7a667cc70c35300e3a4771a3eada01cfd210cffff202/PhyNetPy-0.0.1-py3-none-any.whl (from https://pypi.org/simple/phynetpy/) (requires-python:>=3.8) 2025-12-02T23:13:28,125 Found link https://files.pythonhosted.org/packages/07/c0/6926e821f0eda581cce14244b828941991c1224f468b0e16f77d80f63a8b/PhyNetPy-0.0.3.tar.gz (from https://pypi.org/simple/phynetpy/) (requires-python:>=3.8), version: 0.0.3 2025-12-02T23:13:28,126 Found link https://files.pythonhosted.org/packages/12/5a/4771d05caf1f35a2bed8a225f0d0e5451d92ca18b69b5f38840265b5fd66/PhyNetPy-0.0.7.tar.gz (from https://pypi.org/simple/phynetpy/) (requires-python:>=3.8), version: 0.0.7 2025-12-02T23:13:28,127 Found link https://files.pythonhosted.org/packages/ee/ed/e36b0cbe28e5be4ff209d3761fc9285e484f500538e89d8ef762cdd52f40/PhyNetPy-0.0.8.tar.gz (from https://pypi.org/simple/phynetpy/) (requires-python:>=3.8), version: 0.0.8 2025-12-02T23:13:28,128 Skipping link: No binaries permitted for phynetpy: https://files.pythonhosted.org/packages/84/cb/d3e4aae93b7b081c45816588bcee1e82c94971d3f018cd80e2dfe7cf7e25/phynetpy-0.2.0-py3-none-any.whl (from https://pypi.org/simple/phynetpy/) (requires-python:<4,>=3.8) 2025-12-02T23:13:28,129 Found link https://files.pythonhosted.org/packages/88/ec/0566d2580987848f9e29932b915fc9666baef4250712715554f47054fea1/phynetpy-0.2.0.tar.gz (from https://pypi.org/simple/phynetpy/) (requires-python:<4,>=3.8), version: 0.2.0 2025-12-02T23:13:28,130 Fetching project page and analyzing links: https://www.piwheels.org/simple/phynetpy/ 2025-12-02T23:13:28,131 Getting page https://www.piwheels.org/simple/phynetpy/ 2025-12-02T23:13:28,132 Found index url https://www.piwheels.org/simple 2025-12-02T23:13:28,304 Fetched page https://www.piwheels.org/simple/phynetpy/ as text/html 2025-12-02T23:13:28,307 Skipping link: No binaries permitted for phynetpy: https://archive1.piwheels.org/simple/phynetpy/PhyNetPy-0.1.0-py3-none-any.whl#sha256=6e28656e552521e811ba9c1c9a7fe9b88ec882d9c1bfb898ea789ca8e45c98c7 (from https://www.piwheels.org/simple/phynetpy/) (requires-python:>=3.8) 2025-12-02T23:13:28,308 Skipping link: No binaries permitted for phynetpy: https://archive1.piwheels.org/simple/phynetpy/PhyNetPy-0.0.8-py3-none-any.whl#sha256=a2de25eda6a0d35c114a9fe90ed21157ecc2e5d5ad8c1fcd602ce24b9ffd22b3 (from https://www.piwheels.org/simple/phynetpy/) (requires-python:>=3.8) 2025-12-02T23:13:28,309 Skipping link: No binaries permitted for phynetpy: https://archive1.piwheels.org/simple/phynetpy/PhyNetPy-0.0.7-py3-none-any.whl#sha256=9b8c80272af518d16582a09c6dbf183f3c50c7bda7481812461144ccbfdb6702 (from https://www.piwheels.org/simple/phynetpy/) (requires-python:>=3.8) 2025-12-02T23:13:28,310 Skipping link: No binaries permitted for phynetpy: https://archive1.piwheels.org/simple/phynetpy/PhyNetPy-0.0.3-py3-none-any.whl#sha256=daaf000f384f301addcda39f19569d5dab0097cdd8603085af86618ab61ab0a2 (from https://www.piwheels.org/simple/phynetpy/) (requires-python:>=3.8) 2025-12-02T23:13:28,310 Skipping link: not a file: https://www.piwheels.org/simple/phynetpy/ 2025-12-02T23:13:28,311 Skipping link: not a file: https://pypi.org/simple/phynetpy/ 2025-12-02T23:13:28,334 Given no hashes to check 1 links for project 'phynetpy': discarding no candidates 2025-12-02T23:13:28,352 Collecting phynetpy==0.2.0 2025-12-02T23:13:28,355 Created temporary directory: /tmp/pip-unpack-so82hxsd 2025-12-02T23:13:28,487 Downloading phynetpy-0.2.0.tar.gz (100 kB) 2025-12-02T23:13:28,632 Added phynetpy==0.2.0 from https://files.pythonhosted.org/packages/88/ec/0566d2580987848f9e29932b915fc9666baef4250712715554f47054fea1/phynetpy-0.2.0.tar.gz to build tracker '/tmp/pip-build-tracker-q7ymrdk0' 2025-12-02T23:13:28,637 Created temporary directory: /tmp/pip-build-env-phynyn3l 2025-12-02T23:13:28,642 Installing build dependencies: started 2025-12-02T23:13:28,643 Running command pip subprocess to install build dependencies 2025-12-02T23:13:29,786 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2025-12-02T23:13:30,420 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2025-12-02T23:13:30,444 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-12-02T23:13:32,170 Collecting setuptools>=61 2025-12-02T23:13:32,279 Using cached https://www.piwheels.org/simple/setuptools/setuptools-80.9.0-py3-none-any.whl (1.2 MB) 2025-12-02T23:13:32,548 Collecting wheel 2025-12-02T23:13:32,566 Using cached https://www.piwheels.org/simple/wheel/wheel-0.45.1-py3-none-any.whl (72 kB) 2025-12-02T23:13:33,127 Collecting setuptools_scm 2025-12-02T23:13:33,147 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-9.2.2-py3-none-any.whl (62 kB) 2025-12-02T23:13:33,341 Collecting packaging>=20 2025-12-02T23:13:33,364 Using cached https://www.piwheels.org/simple/packaging/packaging-25.0-py3-none-any.whl (66 kB) 2025-12-02T23:13:36,256 Installing collected packages: wheel, setuptools, packaging, setuptools_scm 2025-12-02T23:13:36,500 Creating /tmp/pip-build-env-phynyn3l/overlay/local/bin 2025-12-02T23:13:36,502 changing mode of /tmp/pip-build-env-phynyn3l/overlay/local/bin/wheel to 755 2025-12-02T23:13:40,613 changing mode of /tmp/pip-build-env-phynyn3l/overlay/local/bin/setuptools-scm to 755 2025-12-02T23:13:40,643 Successfully installed packaging-25.0 setuptools-80.9.0 setuptools_scm-9.2.2 wheel-0.45.1 2025-12-02T23:13:40,931 Installing build dependencies: finished with status 'done' 2025-12-02T23:13:40,938 Getting requirements to build wheel: started 2025-12-02T23:13:40,939 Running command Getting requirements to build wheel 2025-12-02T23:13:41,485 /tmp/pip-build-env-phynyn3l/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:483: SetuptoolsDeprecationWarning: Cannot find any files for the given pattern. 2025-12-02T23:13:41,485 !! 2025-12-02T23:13:41,487 ******************************************************************************** 2025-12-02T23:13:41,487 Pattern 'LICENSE.txt' did not match any files. 2025-12-02T23:13:41,489 By 2026-Mar-20, you need to update your project and remove deprecated calls 2025-12-02T23:13:41,489 or your builds will no longer be supported. 2025-12-02T23:13:41,490 ******************************************************************************** 2025-12-02T23:13:41,491 !! 2025-12-02T23:13:41,491 for path in sorted(cls._find_pattern(pattern, enforce_match)) 2025-12-02T23:13:41,584 toml section missing PosixPath('pyproject.toml') does not contain a tool.setuptools_scm section 2025-12-02T23:13:41,601 /tmp/pip-build-env-phynyn3l/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-12-02T23:13:41,601 !! 2025-12-02T23:13:41,602 ******************************************************************************** 2025-12-02T23:13:41,603 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-12-02T23:13:41,604 License :: OSI Approved :: MIT License 2025-12-02T23:13:41,605 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-12-02T23:13:41,606 ******************************************************************************** 2025-12-02T23:13:41,607 !! 2025-12-02T23:13:41,607 self._finalize_license_expression() 2025-12-02T23:13:41,626 running egg_info 2025-12-02T23:13:41,636 writing phynetpy.egg-info/PKG-INFO 2025-12-02T23:13:41,640 writing dependency_links to phynetpy.egg-info/dependency_links.txt 2025-12-02T23:13:41,642 writing requirements to phynetpy.egg-info/requires.txt 2025-12-02T23:13:41,644 writing top-level names to phynetpy.egg-info/top_level.txt 2025-12-02T23:13:41,708 listing git files failed - pretending there aren't any 2025-12-02T23:13:41,715 reading manifest file 'phynetpy.egg-info/SOURCES.txt' 2025-12-02T23:13:41,722 writing manifest file 'phynetpy.egg-info/SOURCES.txt' 2025-12-02T23:13:41,816 Getting requirements to build wheel: finished with status 'done' 2025-12-02T23:13:41,819 Created temporary directory: /tmp/pip-modern-metadata-t04j9qn6 2025-12-02T23:13:41,822 Preparing metadata (pyproject.toml): started 2025-12-02T23:13:41,823 Running command Preparing metadata (pyproject.toml) 2025-12-02T23:13:42,425 toml section missing PosixPath('pyproject.toml') does not contain a tool.setuptools_scm section 2025-12-02T23:13:42,441 /tmp/pip-build-env-phynyn3l/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-12-02T23:13:42,441 !! 2025-12-02T23:13:42,443 ******************************************************************************** 2025-12-02T23:13:42,443 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-12-02T23:13:42,444 License :: OSI Approved :: MIT License 2025-12-02T23:13:42,445 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-12-02T23:13:42,446 ******************************************************************************** 2025-12-02T23:13:42,447 !! 2025-12-02T23:13:42,447 self._finalize_license_expression() 2025-12-02T23:13:42,448 /tmp/pip-build-env-phynyn3l/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:483: SetuptoolsDeprecationWarning: Cannot find any files for the given pattern. 2025-12-02T23:13:42,448 !! 2025-12-02T23:13:42,450 ******************************************************************************** 2025-12-02T23:13:42,450 Pattern 'LICENSE.txt' did not match any files. 2025-12-02T23:13:42,451 By 2026-Mar-20, you need to update your project and remove deprecated calls 2025-12-02T23:13:42,452 or your builds will no longer be supported. 2025-12-02T23:13:42,452 ******************************************************************************** 2025-12-02T23:13:42,454 !! 2025-12-02T23:13:42,454 for path in sorted(cls._find_pattern(pattern, enforce_match)) 2025-12-02T23:13:42,469 running dist_info 2025-12-02T23:13:42,484 creating /tmp/pip-modern-metadata-t04j9qn6/phynetpy.egg-info 2025-12-02T23:13:42,485 writing /tmp/pip-modern-metadata-t04j9qn6/phynetpy.egg-info/PKG-INFO 2025-12-02T23:13:42,489 writing dependency_links to /tmp/pip-modern-metadata-t04j9qn6/phynetpy.egg-info/dependency_links.txt 2025-12-02T23:13:42,492 writing requirements to /tmp/pip-modern-metadata-t04j9qn6/phynetpy.egg-info/requires.txt 2025-12-02T23:13:42,493 writing top-level names to /tmp/pip-modern-metadata-t04j9qn6/phynetpy.egg-info/top_level.txt 2025-12-02T23:13:42,495 writing manifest file '/tmp/pip-modern-metadata-t04j9qn6/phynetpy.egg-info/SOURCES.txt' 2025-12-02T23:13:42,554 listing git files failed - pretending there aren't any 2025-12-02T23:13:42,560 reading manifest file '/tmp/pip-modern-metadata-t04j9qn6/phynetpy.egg-info/SOURCES.txt' 2025-12-02T23:13:42,565 writing manifest file '/tmp/pip-modern-metadata-t04j9qn6/phynetpy.egg-info/SOURCES.txt' 2025-12-02T23:13:42,566 creating '/tmp/pip-modern-metadata-t04j9qn6/phynetpy-0.2.0.dist-info' 2025-12-02T23:13:42,704 Preparing metadata (pyproject.toml): finished with status 'done' 2025-12-02T23:13:42,709 Source in /tmp/pip-wheel-r0h39kn5/phynetpy_70f5302595354e1cbe1b4d03ae75887a has version 0.2.0, which satisfies requirement phynetpy==0.2.0 from https://files.pythonhosted.org/packages/88/ec/0566d2580987848f9e29932b915fc9666baef4250712715554f47054fea1/phynetpy-0.2.0.tar.gz 2025-12-02T23:13:42,710 Removed phynetpy==0.2.0 from https://files.pythonhosted.org/packages/88/ec/0566d2580987848f9e29932b915fc9666baef4250712715554f47054fea1/phynetpy-0.2.0.tar.gz from build tracker '/tmp/pip-build-tracker-q7ymrdk0' 2025-12-02T23:13:42,715 Created temporary directory: /tmp/pip-unpack-0ni07iwv 2025-12-02T23:13:42,716 Building wheels for collected packages: phynetpy 2025-12-02T23:13:42,721 Created temporary directory: /tmp/pip-wheel-dd2vbodz 2025-12-02T23:13:42,722 Destination directory: /tmp/pip-wheel-dd2vbodz 2025-12-02T23:13:42,724 Building wheel for phynetpy (pyproject.toml): started 2025-12-02T23:13:42,725 Running command Building wheel for phynetpy (pyproject.toml) 2025-12-02T23:13:43,316 toml section missing PosixPath('pyproject.toml') does not contain a tool.setuptools_scm section 2025-12-02T23:13:43,332 /tmp/pip-build-env-phynyn3l/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-12-02T23:13:43,332 !! 2025-12-02T23:13:43,334 ******************************************************************************** 2025-12-02T23:13:43,334 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-12-02T23:13:43,336 License :: OSI Approved :: MIT License 2025-12-02T23:13:43,337 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-12-02T23:13:43,337 ******************************************************************************** 2025-12-02T23:13:43,339 !! 2025-12-02T23:13:43,339 self._finalize_license_expression() 2025-12-02T23:13:43,340 /tmp/pip-build-env-phynyn3l/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:483: SetuptoolsDeprecationWarning: Cannot find any files for the given pattern. 2025-12-02T23:13:43,340 !! 2025-12-02T23:13:43,341 ******************************************************************************** 2025-12-02T23:13:43,342 Pattern 'LICENSE.txt' did not match any files. 2025-12-02T23:13:43,343 By 2026-Mar-20, you need to update your project and remove deprecated calls 2025-12-02T23:13:43,344 or your builds will no longer be supported. 2025-12-02T23:13:43,345 ******************************************************************************** 2025-12-02T23:13:43,346 !! 2025-12-02T23:13:43,347 for path in sorted(cls._find_pattern(pattern, enforce_match)) 2025-12-02T23:13:43,367 running bdist_wheel 2025-12-02T23:13:43,404 running build 2025-12-02T23:13:43,404 running build_py 2025-12-02T23:13:43,416 creating build/lib/phynetpy 2025-12-02T23:13:43,418 copying src/PhyNetPy/Network.py -> build/lib/phynetpy 2025-12-02T23:13:43,423 copying src/PhyNetPy/GTR.py -> build/lib/phynetpy 2025-12-02T23:13:43,425 copying src/PhyNetPy/validation_demo.py -> build/lib/phynetpy 2025-12-02T23:13:43,427 copying src/PhyNetPy/Newick.py -> build/lib/phynetpy 2025-12-02T23:13:43,430 copying src/PhyNetPy/PhyloNet.py -> build/lib/phynetpy 2025-12-02T23:13:43,432 copying src/PhyNetPy/BirthDeath.py -> build/lib/phynetpy 2025-12-02T23:13:43,435 copying src/PhyNetPy/__init__.py -> build/lib/phynetpy 2025-12-02T23:13:43,436 copying src/PhyNetPy/NetworkMoves.py -> build/lib/phynetpy 2025-12-02T23:13:43,439 copying src/PhyNetPy/test_network.py -> build/lib/phynetpy 2025-12-02T23:13:43,441 copying src/PhyNetPy/GraphUtils.py -> build/lib/phynetpy 2025-12-02T23:13:43,444 copying src/PhyNetPy/NetworkParser.py -> build/lib/phynetpy 2025-12-02T23:13:43,447 copying src/PhyNetPy/Matrix.py -> build/lib/phynetpy 2025-12-02T23:13:43,450 copying src/PhyNetPy/test_alphabet.py -> build/lib/phynetpy 2025-12-02T23:13:43,452 copying src/PhyNetPy/test_birthdeath.py -> build/lib/phynetpy 2025-12-02T23:13:43,454 copying src/PhyNetPy/Validation.py -> build/lib/phynetpy 2025-12-02T23:13:43,457 copying src/PhyNetPy/MSA.py -> build/lib/phynetpy 2025-12-02T23:13:43,460 copying src/PhyNetPy/Alphabet.py -> build/lib/phynetpy 2025-12-02T23:13:43,462 copying src/PhyNetPy/GeneTrees.py -> build/lib/phynetpy 2025-12-02T23:13:43,483 installing to build/bdist.linux-armv7l/wheel 2025-12-02T23:13:43,484 running install 2025-12-02T23:13:43,508 running install_lib 2025-12-02T23:13:43,518 creating build/bdist.linux-armv7l/wheel 2025-12-02T23:13:43,520 creating build/bdist.linux-armv7l/wheel/phynetpy 2025-12-02T23:13:43,522 copying build/lib/phynetpy/Network.py -> build/bdist.linux-armv7l/wheel/./phynetpy 2025-12-02T23:13:43,527 copying build/lib/phynetpy/GTR.py -> build/bdist.linux-armv7l/wheel/./phynetpy 2025-12-02T23:13:43,530 copying build/lib/phynetpy/validation_demo.py -> build/bdist.linux-armv7l/wheel/./phynetpy 2025-12-02T23:13:43,532 copying build/lib/phynetpy/Newick.py -> build/bdist.linux-armv7l/wheel/./phynetpy 2025-12-02T23:13:43,534 copying build/lib/phynetpy/PhyloNet.py -> build/bdist.linux-armv7l/wheel/./phynetpy 2025-12-02T23:13:43,536 copying build/lib/phynetpy/BirthDeath.py -> build/bdist.linux-armv7l/wheel/./phynetpy 2025-12-02T23:13:43,539 copying build/lib/phynetpy/__init__.py -> build/bdist.linux-armv7l/wheel/./phynetpy 2025-12-02T23:13:43,541 copying build/lib/phynetpy/NetworkMoves.py -> build/bdist.linux-armv7l/wheel/./phynetpy 2025-12-02T23:13:43,543 copying build/lib/phynetpy/test_network.py -> build/bdist.linux-armv7l/wheel/./phynetpy 2025-12-02T23:13:43,546 copying build/lib/phynetpy/GraphUtils.py -> build/bdist.linux-armv7l/wheel/./phynetpy 2025-12-02T23:13:43,549 copying build/lib/phynetpy/NetworkParser.py -> build/bdist.linux-armv7l/wheel/./phynetpy 2025-12-02T23:13:43,551 copying build/lib/phynetpy/Matrix.py -> build/bdist.linux-armv7l/wheel/./phynetpy 2025-12-02T23:13:43,554 copying build/lib/phynetpy/test_alphabet.py -> build/bdist.linux-armv7l/wheel/./phynetpy 2025-12-02T23:13:43,556 copying build/lib/phynetpy/test_birthdeath.py -> build/bdist.linux-armv7l/wheel/./phynetpy 2025-12-02T23:13:43,558 copying build/lib/phynetpy/Validation.py -> build/bdist.linux-armv7l/wheel/./phynetpy 2025-12-02T23:13:43,561 copying build/lib/phynetpy/MSA.py -> build/bdist.linux-armv7l/wheel/./phynetpy 2025-12-02T23:13:43,564 copying build/lib/phynetpy/Alphabet.py -> build/bdist.linux-armv7l/wheel/./phynetpy 2025-12-02T23:13:43,567 copying build/lib/phynetpy/GeneTrees.py -> build/bdist.linux-armv7l/wheel/./phynetpy 2025-12-02T23:13:43,569 running install_egg_info 2025-12-02T23:13:43,591 running egg_info 2025-12-02T23:13:43,598 writing phynetpy.egg-info/PKG-INFO 2025-12-02T23:13:43,602 writing dependency_links to phynetpy.egg-info/dependency_links.txt 2025-12-02T23:13:43,604 writing requirements to phynetpy.egg-info/requires.txt 2025-12-02T23:13:43,605 writing top-level names to phynetpy.egg-info/top_level.txt 2025-12-02T23:13:43,638 listing git files failed - pretending there aren't any 2025-12-02T23:13:43,644 reading manifest file 'phynetpy.egg-info/SOURCES.txt' 2025-12-02T23:13:43,651 writing manifest file 'phynetpy.egg-info/SOURCES.txt' 2025-12-02T23:13:43,652 Copying phynetpy.egg-info to build/bdist.linux-armv7l/wheel/./phynetpy-0.2.0-py3.11.egg-info 2025-12-02T23:13:43,662 running install_scripts 2025-12-02T23:13:43,669 creating build/bdist.linux-armv7l/wheel/phynetpy-0.2.0.dist-info/WHEEL 2025-12-02T23:13:43,672 creating '/tmp/pip-wheel-dd2vbodz/.tmp-wkxo83bt/phynetpy-0.2.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-12-02T23:13:43,675 adding 'phynetpy/Alphabet.py' 2025-12-02T23:13:43,679 adding 'phynetpy/BirthDeath.py' 2025-12-02T23:13:43,682 adding 'phynetpy/GTR.py' 2025-12-02T23:13:43,686 adding 'phynetpy/GeneTrees.py' 2025-12-02T23:13:43,692 adding 'phynetpy/GraphUtils.py' 2025-12-02T23:13:43,696 adding 'phynetpy/MSA.py' 2025-12-02T23:13:43,698 adding 'phynetpy/Matrix.py' 2025-12-02T23:13:43,714 adding 'phynetpy/Network.py' 2025-12-02T23:13:43,717 adding 'phynetpy/NetworkMoves.py' 2025-12-02T23:13:43,720 adding 'phynetpy/NetworkParser.py' 2025-12-02T23:13:43,722 adding 'phynetpy/Newick.py' 2025-12-02T23:13:43,723 adding 'phynetpy/PhyloNet.py' 2025-12-02T23:13:43,727 adding 'phynetpy/Validation.py' 2025-12-02T23:13:43,728 adding 'phynetpy/__init__.py' 2025-12-02T23:13:43,730 adding 'phynetpy/test_alphabet.py' 2025-12-02T23:13:43,731 adding 'phynetpy/test_birthdeath.py' 2025-12-02T23:13:43,733 adding 'phynetpy/test_network.py' 2025-12-02T23:13:43,734 adding 'phynetpy/validation_demo.py' 2025-12-02T23:13:43,737 adding 'phynetpy-0.2.0.dist-info/METADATA' 2025-12-02T23:13:43,737 adding 'phynetpy-0.2.0.dist-info/WHEEL' 2025-12-02T23:13:43,738 adding 'phynetpy-0.2.0.dist-info/top_level.txt' 2025-12-02T23:13:43,739 adding 'phynetpy-0.2.0.dist-info/RECORD' 2025-12-02T23:13:43,742 removing build/bdist.linux-armv7l/wheel 2025-12-02T23:13:43,847 Building wheel for phynetpy (pyproject.toml): finished with status 'done' 2025-12-02T23:13:43,854 Created wheel for phynetpy: filename=phynetpy-0.2.0-py3-none-any.whl size=105097 sha256=5da2d5282e26d40fec52bd4989634a1459a84f87d21bde344ebaa8d1163cfa83 2025-12-02T23:13:43,855 Stored in directory: /tmp/pip-ephem-wheel-cache-n082xl42/wheels/fd/68/09/113b1bc36a370e9ef2f58d5e0f71aa97bcdf49eb57ad529063 2025-12-02T23:13:43,866 Successfully built phynetpy 2025-12-02T23:13:43,871 Removed build tracker: '/tmp/pip-build-tracker-q7ymrdk0'