2025-12-03T08:59:47,043 Created temporary directory: /tmp/pip-ephem-wheel-cache-vc0b52g9 2025-12-03T08:59:47,045 Created temporary directory: /tmp/pip-build-tracker-fbilccc9 2025-12-03T08:59:47,046 Initialized build tracking at /tmp/pip-build-tracker-fbilccc9 2025-12-03T08:59:47,046 Created build tracker: /tmp/pip-build-tracker-fbilccc9 2025-12-03T08:59:47,047 Entered build tracker: /tmp/pip-build-tracker-fbilccc9 2025-12-03T08:59:47,047 Created temporary directory: /tmp/pip-wheel-kq7bl1xz 2025-12-03T08:59:47,051 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2025-12-03T08:59:47,053 Created temporary directory: /tmp/pip-ephem-wheel-cache-6t6gox2s 2025-12-03T08:59:47,076 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-12-03T08:59:47,080 2 location(s) to search for versions of cassia: 2025-12-03T08:59:47,080 * https://pypi.org/simple/cassia/ 2025-12-03T08:59:47,080 * https://www.piwheels.org/simple/cassia/ 2025-12-03T08:59:47,080 Fetching project page and analyzing links: https://pypi.org/simple/cassia/ 2025-12-03T08:59:47,081 Getting page https://pypi.org/simple/cassia/ 2025-12-03T08:59:47,082 Found index url https://pypi.org/simple 2025-12-03T08:59:47,220 Fetched page https://pypi.org/simple/cassia/ as application/vnd.pypi.simple.v1+json 2025-12-03T08:59:47,228 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/fd/14/94da6522b1364498cddd2c537019fc450393500cdc692b689297115da8ec/CASSIA-0.1-py3-none-any.whl (from https://pypi.org/simple/cassia/) 2025-12-03T08:59:47,228 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/f7/1b/6997afb5835697ec0ef343b4ad8c02d0a29f3b86e89705d36ce76f95e311/CASSIA-0.1.0-py3-none-any.whl (from https://pypi.org/simple/cassia/) 2025-12-03T08:59:47,229 Found link https://files.pythonhosted.org/packages/26/97/db8e55429eee275f757c4447b74a395a0e5c21922c4f502d93f0977ae9b2/cassia-0.1.tar.gz (from https://pypi.org/simple/cassia/), version: 0.1 2025-12-03T08:59:47,230 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/bd/f9/d0cd59dd7ce3d19c2ffb54d448002a2396640796d331474044d229129192/CASSIA-0.1.1-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T08:59:47,231 Found link https://files.pythonhosted.org/packages/80/fa/494a5d4035fd6e11e7d80197728297196f244c54a072cf72d65ab0345b98/cassia-0.1.1.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.8), version: 0.1.1 2025-12-03T08:59:47,232 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/6f/d8/4900dc3805e66254667d349f4d51c8ac8a5342ca145785e5b9d0f80e3aa1/CASSIA-0.1.2-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T08:59:47,233 Found link https://files.pythonhosted.org/packages/36/6b/b9f052c0de80cfab4026b64a8c0a2042c46275aba336623484a3013233f8/cassia-0.1.2.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.8), version: 0.1.2 2025-12-03T08:59:47,233 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/dd/a7/23e6df5395de019994180ba12dfda49d85702fe01d3635ccf230133a76d5/CASSIA-0.1.3-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T08:59:47,234 Found link https://files.pythonhosted.org/packages/30/6c/a3d59df5aba1a664d3ec3494dfabc008a35f2391b095545c6de517345699/cassia-0.1.3.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.8), version: 0.1.3 2025-12-03T08:59:47,235 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/73/95/c7a43ea77725d76db542aa209815aade50c2a857c320aa49a30d9b30311b/CASSIA-0.1.4-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T08:59:47,236 Found link https://files.pythonhosted.org/packages/b8/ac/bfc205400bd5a1856ef48e20a56f78971cdb98f6b7681936d0a8d36c5ad9/cassia-0.1.4.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.8), version: 0.1.4 2025-12-03T08:59:47,237 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/58/a5/4c80ef7639de67ddcd728825d7c0054cb0f11ae6494e3c53b83ea0dd4a8c/CASSIA-0.1.5-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T08:59:47,238 Found link https://files.pythonhosted.org/packages/35/92/abce78e33564190569868bfa24fa1bb57197c46a56e245c04b674849c4ad/cassia-0.1.5.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.8), version: 0.1.5 2025-12-03T08:59:47,238 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/b7/da/dff3b6ffc6a6958de824b5ca680bc8d0543799343ccc4a45f2aae940941a/CASSIA-0.1.6-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T08:59:47,239 Found link https://files.pythonhosted.org/packages/e8/b6/f39d8bf9410a597b9ff10da7a4a8a67939aa2d33214d20db4d645a1cec44/cassia-0.1.6.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.8), version: 0.1.6 2025-12-03T08:59:47,240 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/96/1f/bb55e307a91d58477954d8786da585b9b4c4952bb3024a04cfe9461b9be9/CASSIA-0.1.7-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T08:59:47,241 Found link https://files.pythonhosted.org/packages/33/42/7ee57e8e2f32734268e4b486e0ea072869996ea2f0736fcc8502fbe28ccf/cassia-0.1.7.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.8), version: 0.1.7 2025-12-03T08:59:47,241 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/70/04/7c91cc5853ad95a37f922e401379f6b618ade43b11445eef018cfb436d56/CASSIA-0.1.8-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T08:59:47,242 Found link https://files.pythonhosted.org/packages/5d/16/7c43c97b5902f6fd7c1be4d726071a66cc65a2ba85880aba619f486d12a0/cassia-0.1.8.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.8), version: 0.1.8 2025-12-03T08:59:47,243 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/70/da/c5c1418310e8615c77ad99119af127f3ac2bdb21d5c69725df82583ca76e/CASSIA-0.1.9-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T08:59:47,244 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/5a/81/dd2738b5a33767ed19eee3c6add0bc13397e7bc1144e82f045762875feee/cassia-0.1.9-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T08:59:47,245 Found link https://files.pythonhosted.org/packages/fa/c4/1d279642d823e5fb7816e5dc0c9cf96b7256f3cabc3422762a1c64f9d5b4/cassia-0.1.9.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.8), version: 0.1.9 2025-12-03T08:59:47,245 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/4d/89/acd0978a3887e8b2fbf2d13dbf2cae3c19e3a08d0ddb2556775382b3be6b/cassia-0.2.0-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T08:59:47,246 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/8c/7d/3a7f158a1eaacbc08841d040134a21f9f1fbdfe6626957b1859bd2f9ab33/cassia-0.3.1.dev5-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.9) 2025-12-03T08:59:47,247 Found link https://files.pythonhosted.org/packages/cf/72/ca0b05784b7d668e4a4db6f638a3d7755898428d4db3e16b6cb050f6b6e2/cassia-0.3.1.dev5.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.9), version: 0.3.1.dev5 2025-12-03T08:59:47,248 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/d5/49/cf25a7220924c494be409d4fedc2a0033036e2ab5969c426fb23a5d68e71/cassia-0.3.1-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.9) 2025-12-03T08:59:47,249 Found link https://files.pythonhosted.org/packages/c0/87/f4a8fc33d6d1d21317d07ca08e896e88a14f444c822bbac3156303bcc324/cassia-0.3.1.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.9), version: 0.3.1 2025-12-03T08:59:47,250 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/09/cb/15b1522b479d1d3c9b9b0974cbcda929d1b461846216e19dcb3e21bb8992/cassia-0.3.2-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.9) 2025-12-03T08:59:47,251 Found link https://files.pythonhosted.org/packages/97/a3/cf67e557f6834ff73840c487e10a9f3da2984c5547c4fe78f533a8a4d81f/cassia-0.3.2.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.9), version: 0.3.2 2025-12-03T08:59:47,251 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/20/35/030a33b1893a65a3b683a1a0392b81759aeb812d1c056135e874b3861e21/cassia-0.3.3-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.9) 2025-12-03T08:59:47,252 Found link https://files.pythonhosted.org/packages/69/74/6cdb354fa394126745f6e9dbc376fc6155f7ee833c0f7a946158d9517509/cassia-0.3.3.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.9), version: 0.3.3 2025-12-03T08:59:47,253 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/9a/b9/9d8fda29887b36528dc22ffeed038b25693005575d7a0c6e84e0075e59d9/cassia-0.3.4-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.9) 2025-12-03T08:59:47,253 Found link https://files.pythonhosted.org/packages/0d/a5/d94c8cee96e48c358bd76554439bd8b6681c91b0d0bc3b7c371909e7fc2e/cassia-0.3.4.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.9), version: 0.3.4 2025-12-03T08:59:47,254 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/b7/2c/319ede09ec41c0418df38a3d57f8bf51743861bdb270d52886b73cfd70a9/cassia-0.3.5-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.9) 2025-12-03T08:59:47,255 Found link https://files.pythonhosted.org/packages/84/26/bc10df28dd2f72286acd1577cca585137f100ed63d73ad566c514e51e0d9/cassia-0.3.5.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.9), version: 0.3.5 2025-12-03T08:59:47,256 Fetching project page and analyzing links: https://www.piwheels.org/simple/cassia/ 2025-12-03T08:59:47,257 Getting page https://www.piwheels.org/simple/cassia/ 2025-12-03T08:59:47,258 Found index url https://www.piwheels.org/simple 2025-12-03T08:59:47,458 Fetched page https://www.piwheels.org/simple/cassia/ as text/html 2025-12-03T08:59:47,463 Skipping link: No binaries permitted for cassia: https://www.piwheels.org/simple/cassia/cassia-0.3.4-py3-none-any.whl#sha256=ed435b05bb4b9391caf3ce05966c4b0797cfd57f7954ab9e8bfea9a0a57a10b0 (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.9) 2025-12-03T08:59:47,464 Skipping link: No binaries permitted for cassia: https://www.piwheels.org/simple/cassia/cassia-0.3.3-py3-none-any.whl#sha256=8e7163a499a36ef67a2a8582dac289c8db2919b9547f50cb58a2ec9f8fbe95f7 (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.9) 2025-12-03T08:59:47,464 Skipping link: No binaries permitted for cassia: https://www.piwheels.org/simple/cassia/cassia-0.3.2-py3-none-any.whl#sha256=cfc4a3f0168f9bf5ff3b3e0599b3f6115003e76644a7d33ec72fb2a18418234e (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.9) 2025-12-03T08:59:47,465 Skipping link: No binaries permitted for cassia: https://www.piwheels.org/simple/cassia/cassia-0.3.1-py3-none-any.whl#sha256=23c05779907a878e9671bb268e9c289efeef9aae12d9fed32f154bab4801e7dc (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.9) 2025-12-03T08:59:47,466 Skipping link: No binaries permitted for cassia: https://www.piwheels.org/simple/cassia/cassia-0.3.1.dev5-py3-none-any.whl#sha256=a05494df3be28005ecfe1dbbf97be4915253c487124e6a21d8da527bfd0fae87 (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.9) 2025-12-03T08:59:47,466 Skipping link: No binaries permitted for cassia: https://archive1.piwheels.org/simple/cassia/CASSIA-0.1.9-py3-none-any.whl#sha256=4c587602b1448b8326ae2da0164231e380dafd18476e24c360e0d5feab208609 (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T08:59:47,467 Skipping link: No binaries permitted for cassia: https://archive1.piwheels.org/simple/cassia/CASSIA-0.1.8-py3-none-any.whl#sha256=cef2f4adcf97a44f0f82dd394894647453f715df43e0f5856d81585be13c751b (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T08:59:47,468 Skipping link: No binaries permitted for cassia: https://archive1.piwheels.org/simple/cassia/CASSIA-0.1.7-py3-none-any.whl#sha256=46ffccf6ecab46768cce8957600e3f5bb1acb23dbcca70881c3ab046159e76a6 (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T08:59:47,468 Skipping link: No binaries permitted for cassia: https://archive1.piwheels.org/simple/cassia/CASSIA-0.1.6-py3-none-any.whl#sha256=e677bff5ce5ec53e01b7f460be6137747a33b853bdacbb1fa3d11f02762ae789 (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T08:59:47,468 Skipping link: No binaries permitted for cassia: https://archive1.piwheels.org/simple/cassia/CASSIA-0.1.5-py3-none-any.whl#sha256=c1fa353a8507b7eca9619d54936424e38712e556ac918e547bb5404d1ad82fa3 (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T08:59:47,469 Skipping link: No binaries permitted for cassia: https://archive1.piwheels.org/simple/cassia/CASSIA-0.1.4-py3-none-any.whl#sha256=123d4ecb5c6db6bf550344141a0cdc4fc41e704b0a40f39833d42d413e0e023d (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T08:59:47,469 Skipping link: No binaries permitted for cassia: https://archive1.piwheels.org/simple/cassia/CASSIA-0.1.3-py3-none-any.whl#sha256=8199c427ae36776b6c0278e67653729e138fb30e0a7769a9d13a85457163cc56 (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T08:59:47,470 Skipping link: No binaries permitted for cassia: https://archive1.piwheels.org/simple/cassia/CASSIA-0.1.2-py3-none-any.whl#sha256=6d708d28ac90607cc607a0eef783d50c308e58d3b6033e859b1dd9b9e43e13a6 (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T08:59:47,470 Skipping link: No binaries permitted for cassia: https://archive1.piwheels.org/simple/cassia/CASSIA-0.1.1-py3-none-any.whl#sha256=dec9df705c4c727b15a27e8e00e5e5a596dfec5a1606399d07c55f3014e3966a (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T08:59:47,471 Skipping link: No binaries permitted for cassia: https://archive1.piwheels.org/simple/cassia/CASSIA-0.1-py3-none-any.whl#sha256=56cd7ee82de55f6979e4830559b1b507ee28ff730829f8effcbad8a045873a5a (from https://www.piwheels.org/simple/cassia/) 2025-12-03T08:59:47,472 Skipping link: not a file: https://www.piwheels.org/simple/cassia/ 2025-12-03T08:59:47,472 Skipping link: not a file: https://pypi.org/simple/cassia/ 2025-12-03T08:59:47,494 Given no hashes to check 1 links for project 'cassia': discarding no candidates 2025-12-03T08:59:47,514 Collecting cassia==0.3.5 2025-12-03T08:59:47,516 Created temporary directory: /tmp/pip-unpack-08x2l486 2025-12-03T08:59:47,742 Downloading cassia-0.3.5.tar.gz (1.5 MB) 2025-12-03T08:59:48,287 Added cassia==0.3.5 from https://files.pythonhosted.org/packages/84/26/bc10df28dd2f72286acd1577cca585137f100ed63d73ad566c514e51e0d9/cassia-0.3.5.tar.gz to build tracker '/tmp/pip-build-tracker-fbilccc9' 2025-12-03T08:59:48,289 Running setup.py (path:/tmp/pip-wheel-kq7bl1xz/cassia_2ef32d3dedcb4114930a83374c822685/setup.py) egg_info for package cassia 2025-12-03T08:59:48,290 Created temporary directory: /tmp/pip-pip-egg-info-_2ss74at 2025-12-03T08:59:48,291 Preparing metadata (setup.py): started 2025-12-03T08:59:48,292 Running command python setup.py egg_info 2025-12-03T08:59:49,205 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-12-03T08:59:49,206 !! 2025-12-03T08:59:49,206 ******************************************************************************** 2025-12-03T08:59:49,207 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-12-03T08:59:49,208 License :: OSI Approved :: MIT License 2025-12-03T08:59:49,209 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-12-03T08:59:49,209 ******************************************************************************** 2025-12-03T08:59:49,210 !! 2025-12-03T08:59:49,211 self._finalize_license_expression() 2025-12-03T08:59:49,234 running egg_info 2025-12-03T08:59:49,263 creating /tmp/pip-pip-egg-info-_2ss74at/CASSIA.egg-info 2025-12-03T08:59:49,264 writing /tmp/pip-pip-egg-info-_2ss74at/CASSIA.egg-info/PKG-INFO 2025-12-03T08:59:49,268 writing dependency_links to /tmp/pip-pip-egg-info-_2ss74at/CASSIA.egg-info/dependency_links.txt 2025-12-03T08:59:49,270 writing requirements to /tmp/pip-pip-egg-info-_2ss74at/CASSIA.egg-info/requires.txt 2025-12-03T08:59:49,271 writing top-level names to /tmp/pip-pip-egg-info-_2ss74at/CASSIA.egg-info/top_level.txt 2025-12-03T08:59:49,272 writing manifest file '/tmp/pip-pip-egg-info-_2ss74at/CASSIA.egg-info/SOURCES.txt' 2025-12-03T08:59:49,381 reading manifest file '/tmp/pip-pip-egg-info-_2ss74at/CASSIA.egg-info/SOURCES.txt' 2025-12-03T08:59:49,387 writing manifest file '/tmp/pip-pip-egg-info-_2ss74at/CASSIA.egg-info/SOURCES.txt' 2025-12-03T08:59:49,495 Preparing metadata (setup.py): finished with status 'done' 2025-12-03T08:59:49,499 Source in /tmp/pip-wheel-kq7bl1xz/cassia_2ef32d3dedcb4114930a83374c822685 has version 0.3.5, which satisfies requirement cassia==0.3.5 from https://files.pythonhosted.org/packages/84/26/bc10df28dd2f72286acd1577cca585137f100ed63d73ad566c514e51e0d9/cassia-0.3.5.tar.gz 2025-12-03T08:59:49,500 Removed cassia==0.3.5 from https://files.pythonhosted.org/packages/84/26/bc10df28dd2f72286acd1577cca585137f100ed63d73ad566c514e51e0d9/cassia-0.3.5.tar.gz from build tracker '/tmp/pip-build-tracker-fbilccc9' 2025-12-03T08:59:49,506 Created temporary directory: /tmp/pip-unpack-aqkftud9 2025-12-03T08:59:49,507 Building wheels for collected packages: cassia 2025-12-03T08:59:49,512 Created temporary directory: /tmp/pip-wheel-xd3p0srf 2025-12-03T08:59:49,512 Building wheel for cassia (setup.py): started 2025-12-03T08:59:49,514 Destination directory: /tmp/pip-wheel-xd3p0srf 2025-12-03T08:59:49,514 Running command python setup.py bdist_wheel 2025-12-03T08:59:50,352 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-12-03T08:59:50,352 !! 2025-12-03T08:59:50,353 ******************************************************************************** 2025-12-03T08:59:50,354 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-12-03T08:59:50,355 License :: OSI Approved :: MIT License 2025-12-03T08:59:50,356 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-12-03T08:59:50,356 ******************************************************************************** 2025-12-03T08:59:50,358 !! 2025-12-03T08:59:50,358 self._finalize_license_expression() 2025-12-03T08:59:50,359 running bdist_wheel 2025-12-03T08:59:50,491 running build 2025-12-03T08:59:50,492 running build_py 2025-12-03T08:59:50,524 creating build/lib/CASSIA 2025-12-03T08:59:50,526 copying CASSIA/LLM_evaluation_test.py -> build/lib/CASSIA 2025-12-03T08:59:50,529 copying CASSIA/LLM_evaluation_getscore.py -> build/lib/CASSIA 2025-12-03T08:59:50,531 copying CASSIA/__init__.py -> build/lib/CASSIA 2025-12-03T08:59:50,534 copying CASSIA/generate_comparison.py -> build/lib/CASSIA 2025-12-03T08:59:50,536 copying CASSIA/run_full_test.py -> build/lib/CASSIA 2025-12-03T08:59:50,538 copying CASSIA/CASSIA_python_tutorial.py -> build/lib/CASSIA 2025-12-03T08:59:50,542 creating build/lib/CASSIA/data 2025-12-03T08:59:50,543 copying CASSIA/data/__init__.py -> build/lib/CASSIA/data 2025-12-03T08:59:50,546 creating build/lib/CASSIA/evaluation 2025-12-03T08:59:50,547 copying CASSIA/evaluation/cell_type_comparison.py -> build/lib/CASSIA/evaluation 2025-12-03T08:59:50,550 copying CASSIA/evaluation/scoring.py -> build/lib/CASSIA/evaluation 2025-12-03T08:59:50,552 copying CASSIA/evaluation/__init__.py -> build/lib/CASSIA/evaluation 2025-12-03T08:59:50,554 copying CASSIA/evaluation/LLM_evaluation.py -> build/lib/CASSIA/evaluation 2025-12-03T08:59:50,558 creating build/lib/CASSIA/engine 2025-12-03T08:59:50,559 copying CASSIA/engine/main_function_code.py -> build/lib/CASSIA/engine 2025-12-03T08:59:50,562 copying CASSIA/engine/tools_function.py -> build/lib/CASSIA/engine 2025-12-03T08:59:50,564 copying CASSIA/engine/__init__.py -> build/lib/CASSIA/engine 2025-12-03T08:59:50,567 creating build/lib/CASSIA/config 2025-12-03T08:59:50,567 copying CASSIA/config/set_api_keys.py -> build/lib/CASSIA/config 2025-12-03T08:59:50,569 copying CASSIA/config/__init__.py -> build/lib/CASSIA/config 2025-12-03T08:59:50,572 creating build/lib/CASSIA/pipeline 2025-12-03T08:59:50,572 copying CASSIA/pipeline/pipeline.py -> build/lib/CASSIA/pipeline 2025-12-03T08:59:50,575 copying CASSIA/pipeline/__init__.py -> build/lib/CASSIA/pipeline 2025-12-03T08:59:50,577 creating build/lib/CASSIA/imaging 2025-12-03T08:59:50,578 copying CASSIA/imaging/llm_image.py -> build/lib/CASSIA/imaging 2025-12-03T08:59:50,581 copying CASSIA/imaging/__init__.py -> build/lib/CASSIA/imaging 2025-12-03T08:59:50,583 creating build/lib/CASSIA/hypothesis 2025-12-03T08:59:50,584 copying CASSIA/hypothesis/hypothesis_generation.py -> build/lib/CASSIA/hypothesis 2025-12-03T08:59:50,587 copying CASSIA/hypothesis/__init__.py -> build/lib/CASSIA/hypothesis 2025-12-03T08:59:50,588 copying CASSIA/hypothesis/summarize_hypothesis_runs.py -> build/lib/CASSIA/hypothesis 2025-12-03T08:59:50,592 creating build/lib/CASSIA/core 2025-12-03T08:59:50,593 copying CASSIA/core/model_settings.py -> build/lib/CASSIA/core 2025-12-03T08:59:50,595 copying CASSIA/core/progress_tracker.py -> build/lib/CASSIA/core 2025-12-03T08:59:50,597 copying CASSIA/core/logging_config.py -> build/lib/CASSIA/core 2025-12-03T08:59:50,600 copying CASSIA/core/marker_utils.py -> build/lib/CASSIA/core 2025-12-03T08:59:50,602 copying CASSIA/core/exceptions.py -> build/lib/CASSIA/core 2025-12-03T08:59:50,604 copying CASSIA/core/utils.py -> build/lib/CASSIA/core 2025-12-03T08:59:50,606 copying CASSIA/core/llm_utils.py -> build/lib/CASSIA/core 2025-12-03T08:59:50,609 copying CASSIA/core/__init__.py -> build/lib/CASSIA/core 2025-12-03T08:59:50,610 copying CASSIA/core/validation.py -> build/lib/CASSIA/core 2025-12-03T08:59:50,613 creating build/lib/CASSIA/comparison 2025-12-03T08:59:50,614 copying CASSIA/comparison/symphony_compare.py -> build/lib/CASSIA/comparison 2025-12-03T08:59:50,617 copying CASSIA/comparison/__init__.py -> build/lib/CASSIA/comparison 2025-12-03T08:59:50,619 creating build/lib/CASSIA/reports 2025-12-03T08:59:50,620 copying CASSIA/reports/generate_reports.py -> build/lib/CASSIA/reports 2025-12-03T08:59:50,625 copying CASSIA/reports/generate_hypothesis_report.py -> build/lib/CASSIA/reports 2025-12-03T08:59:50,627 copying CASSIA/reports/__init__.py -> build/lib/CASSIA/reports 2025-12-03T08:59:50,629 copying CASSIA/reports/generate_report_uncertainty.py -> build/lib/CASSIA/reports 2025-12-03T08:59:50,632 copying CASSIA/reports/generate_batch_report.py -> build/lib/CASSIA/reports 2025-12-03T08:59:50,637 creating build/lib/CASSIA/agents 2025-12-03T08:59:50,638 copying CASSIA/agents/__init__.py -> build/lib/CASSIA/agents 2025-12-03T08:59:50,641 creating build/lib/CASSIA/agents/reference_agent 2025-12-03T08:59:50,642 copying CASSIA/agents/reference_agent/reference_selector.py -> build/lib/CASSIA/agents/reference_agent 2025-12-03T08:59:50,645 copying CASSIA/agents/reference_agent/complexity_scorer.py -> build/lib/CASSIA/agents/reference_agent 2025-12-03T08:59:50,647 copying CASSIA/agents/reference_agent/utils.py -> build/lib/CASSIA/agents/reference_agent 2025-12-03T08:59:50,649 copying CASSIA/agents/reference_agent/section_extractor.py -> build/lib/CASSIA/agents/reference_agent 2025-12-03T08:59:50,652 copying CASSIA/agents/reference_agent/reference_agent.py -> build/lib/CASSIA/agents/reference_agent 2025-12-03T08:59:50,654 copying CASSIA/agents/reference_agent/__init__.py -> build/lib/CASSIA/agents/reference_agent 2025-12-03T08:59:50,656 creating build/lib/CASSIA/agents/subclustering 2025-12-03T08:59:50,657 copying CASSIA/agents/subclustering/subclustering.py -> build/lib/CASSIA/agents/subclustering 2025-12-03T08:59:50,660 copying CASSIA/agents/subclustering/__init__.py -> build/lib/CASSIA/agents/subclustering 2025-12-03T08:59:50,662 creating build/lib/CASSIA/agents/annotation_boost 2025-12-03T08:59:50,663 copying CASSIA/agents/annotation_boost/super_annotation_boost.py -> build/lib/CASSIA/agents/annotation_boost 2025-12-03T08:59:50,669 copying CASSIA/agents/annotation_boost/annotation_boost.py -> build/lib/CASSIA/agents/annotation_boost 2025-12-03T08:59:50,673 copying CASSIA/agents/annotation_boost/__init__.py -> build/lib/CASSIA/agents/annotation_boost 2025-12-03T08:59:50,675 creating build/lib/CASSIA/agents/merging 2025-12-03T08:59:50,676 copying CASSIA/agents/merging/merging_annotation.py -> build/lib/CASSIA/agents/merging 2025-12-03T08:59:50,679 copying CASSIA/agents/merging/__init__.py -> build/lib/CASSIA/agents/merging 2025-12-03T08:59:50,681 creating build/lib/CASSIA/agents/uncertainty 2025-12-03T08:59:50,682 copying CASSIA/agents/uncertainty/Uncertainty_quantification.py -> build/lib/CASSIA/agents/uncertainty 2025-12-03T08:59:50,685 copying CASSIA/agents/uncertainty/__init__.py -> build/lib/CASSIA/agents/uncertainty 2025-12-03T08:59:50,687 running egg_info 2025-12-03T08:59:50,714 writing CASSIA.egg-info/PKG-INFO 2025-12-03T08:59:50,718 writing dependency_links to CASSIA.egg-info/dependency_links.txt 2025-12-03T08:59:50,720 writing requirements to CASSIA.egg-info/requires.txt 2025-12-03T08:59:50,721 writing top-level names to CASSIA.egg-info/top_level.txt 2025-12-03T08:59:50,764 reading manifest file 'CASSIA.egg-info/SOURCES.txt' 2025-12-03T08:59:50,777 writing manifest file 'CASSIA.egg-info/SOURCES.txt' 2025-12-03T08:59:50,787 copying CASSIA/data/subcluster_results.csv -> build/lib/CASSIA/data 2025-12-03T08:59:50,828 copying CASSIA/data/processed.csv -> build/lib/CASSIA/data 2025-12-03T08:59:50,831 copying CASSIA/data/unprocessed.csv -> build/lib/CASSIA/data 2025-12-03T08:59:50,965 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2025-12-03T08:59:50,966 !! 2025-12-03T08:59:50,967 ******************************************************************************** 2025-12-03T08:59:50,967 Please avoid running ``setup.py`` directly. 2025-12-03T08:59:50,968 Instead, use pypa/build, pypa/installer or other 2025-12-03T08:59:50,969 standards-based tools. 2025-12-03T08:59:50,970 This deprecation is overdue, please update your project and remove deprecated 2025-12-03T08:59:50,970 calls to avoid build errors in the future. 2025-12-03T08:59:50,971 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2025-12-03T08:59:50,972 ******************************************************************************** 2025-12-03T08:59:50,973 !! 2025-12-03T08:59:50,974 self.initialize_options() 2025-12-03T08:59:50,995 installing to build/bdist.linux-armv7l/wheel 2025-12-03T08:59:50,996 running install 2025-12-03T08:59:51,019 running install_lib 2025-12-03T08:59:51,047 creating build/bdist.linux-armv7l/wheel 2025-12-03T08:59:51,049 creating build/bdist.linux-armv7l/wheel/CASSIA 2025-12-03T08:59:51,051 creating build/bdist.linux-armv7l/wheel/CASSIA/data 2025-12-03T08:59:51,052 copying build/lib/CASSIA/data/subcluster_results.csv -> build/bdist.linux-armv7l/wheel/./CASSIA/data 2025-12-03T08:59:51,056 copying build/lib/CASSIA/data/processed.csv -> build/bdist.linux-armv7l/wheel/./CASSIA/data 2025-12-03T08:59:51,057 copying build/lib/CASSIA/data/unprocessed.csv -> build/bdist.linux-armv7l/wheel/./CASSIA/data 2025-12-03T08:59:51,196 copying build/lib/CASSIA/data/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/data 2025-12-03T08:59:51,198 creating build/bdist.linux-armv7l/wheel/CASSIA/evaluation 2025-12-03T08:59:51,199 copying build/lib/CASSIA/evaluation/cell_type_comparison.py -> build/bdist.linux-armv7l/wheel/./CASSIA/evaluation 2025-12-03T08:59:51,202 copying build/lib/CASSIA/evaluation/scoring.py -> build/bdist.linux-armv7l/wheel/./CASSIA/evaluation 2025-12-03T08:59:51,204 copying build/lib/CASSIA/evaluation/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/evaluation 2025-12-03T08:59:51,206 copying build/lib/CASSIA/evaluation/LLM_evaluation.py -> build/bdist.linux-armv7l/wheel/./CASSIA/evaluation 2025-12-03T08:59:51,211 creating build/bdist.linux-armv7l/wheel/CASSIA/engine 2025-12-03T08:59:51,212 copying build/lib/CASSIA/engine/main_function_code.py -> build/bdist.linux-armv7l/wheel/./CASSIA/engine 2025-12-03T08:59:51,215 copying build/lib/CASSIA/engine/tools_function.py -> build/bdist.linux-armv7l/wheel/./CASSIA/engine 2025-12-03T08:59:51,218 copying build/lib/CASSIA/engine/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/engine 2025-12-03T08:59:51,220 creating build/bdist.linux-armv7l/wheel/CASSIA/config 2025-12-03T08:59:51,221 copying build/lib/CASSIA/config/set_api_keys.py -> build/bdist.linux-armv7l/wheel/./CASSIA/config 2025-12-03T08:59:51,223 copying build/lib/CASSIA/config/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/config 2025-12-03T08:59:51,225 copying build/lib/CASSIA/LLM_evaluation_test.py -> build/bdist.linux-armv7l/wheel/./CASSIA 2025-12-03T08:59:51,228 creating build/bdist.linux-armv7l/wheel/CASSIA/pipeline 2025-12-03T08:59:51,229 copying build/lib/CASSIA/pipeline/pipeline.py -> build/bdist.linux-armv7l/wheel/./CASSIA/pipeline 2025-12-03T08:59:51,232 copying build/lib/CASSIA/pipeline/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/pipeline 2025-12-03T08:59:51,234 creating build/bdist.linux-armv7l/wheel/CASSIA/imaging 2025-12-03T08:59:51,235 copying build/lib/CASSIA/imaging/llm_image.py -> build/bdist.linux-armv7l/wheel/./CASSIA/imaging 2025-12-03T08:59:51,238 copying build/lib/CASSIA/imaging/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/imaging 2025-12-03T08:59:51,240 creating build/bdist.linux-armv7l/wheel/CASSIA/hypothesis 2025-12-03T08:59:51,241 copying build/lib/CASSIA/hypothesis/hypothesis_generation.py -> build/bdist.linux-armv7l/wheel/./CASSIA/hypothesis 2025-12-03T08:59:51,244 copying build/lib/CASSIA/hypothesis/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/hypothesis 2025-12-03T08:59:51,246 copying build/lib/CASSIA/hypothesis/summarize_hypothesis_runs.py -> build/bdist.linux-armv7l/wheel/./CASSIA/hypothesis 2025-12-03T08:59:51,249 copying build/lib/CASSIA/LLM_evaluation_getscore.py -> build/bdist.linux-armv7l/wheel/./CASSIA 2025-12-03T08:59:51,252 creating build/bdist.linux-armv7l/wheel/CASSIA/core 2025-12-03T08:59:51,253 copying build/lib/CASSIA/core/model_settings.py -> build/bdist.linux-armv7l/wheel/./CASSIA/core 2025-12-03T08:59:51,256 copying build/lib/CASSIA/core/progress_tracker.py -> build/bdist.linux-armv7l/wheel/./CASSIA/core 2025-12-03T08:59:51,259 copying build/lib/CASSIA/core/logging_config.py -> build/bdist.linux-armv7l/wheel/./CASSIA/core 2025-12-03T08:59:51,261 copying build/lib/CASSIA/core/marker_utils.py -> build/bdist.linux-armv7l/wheel/./CASSIA/core 2025-12-03T08:59:51,264 copying build/lib/CASSIA/core/exceptions.py -> build/bdist.linux-armv7l/wheel/./CASSIA/core 2025-12-03T08:59:51,267 copying build/lib/CASSIA/core/utils.py -> build/bdist.linux-armv7l/wheel/./CASSIA/core 2025-12-03T08:59:51,270 copying build/lib/CASSIA/core/llm_utils.py -> build/bdist.linux-armv7l/wheel/./CASSIA/core 2025-12-03T08:59:51,272 copying build/lib/CASSIA/core/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/core 2025-12-03T08:59:51,275 copying build/lib/CASSIA/core/validation.py -> build/bdist.linux-armv7l/wheel/./CASSIA/core 2025-12-03T08:59:51,278 copying build/lib/CASSIA/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA 2025-12-03T08:59:51,280 copying build/lib/CASSIA/generate_comparison.py -> build/bdist.linux-armv7l/wheel/./CASSIA 2025-12-03T08:59:51,283 copying build/lib/CASSIA/run_full_test.py -> build/bdist.linux-armv7l/wheel/./CASSIA 2025-12-03T08:59:51,286 creating build/bdist.linux-armv7l/wheel/CASSIA/comparison 2025-12-03T08:59:51,288 copying build/lib/CASSIA/comparison/symphony_compare.py -> build/bdist.linux-armv7l/wheel/./CASSIA/comparison 2025-12-03T08:59:51,291 copying build/lib/CASSIA/comparison/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/comparison 2025-12-03T08:59:51,293 creating build/bdist.linux-armv7l/wheel/CASSIA/reports 2025-12-03T08:59:51,295 copying build/lib/CASSIA/reports/generate_reports.py -> build/bdist.linux-armv7l/wheel/./CASSIA/reports 2025-12-03T08:59:51,299 copying build/lib/CASSIA/reports/generate_hypothesis_report.py -> build/bdist.linux-armv7l/wheel/./CASSIA/reports 2025-12-03T08:59:51,301 copying build/lib/CASSIA/reports/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/reports 2025-12-03T08:59:51,303 copying build/lib/CASSIA/reports/generate_report_uncertainty.py -> build/bdist.linux-armv7l/wheel/./CASSIA/reports 2025-12-03T08:59:51,307 copying build/lib/CASSIA/reports/generate_batch_report.py -> build/bdist.linux-armv7l/wheel/./CASSIA/reports 2025-12-03T08:59:51,312 creating build/bdist.linux-armv7l/wheel/CASSIA/agents 2025-12-03T08:59:51,314 creating build/bdist.linux-armv7l/wheel/CASSIA/agents/reference_agent 2025-12-03T08:59:51,315 copying build/lib/CASSIA/agents/reference_agent/reference_selector.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/reference_agent 2025-12-03T08:59:51,318 copying build/lib/CASSIA/agents/reference_agent/complexity_scorer.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/reference_agent 2025-12-03T08:59:51,321 copying build/lib/CASSIA/agents/reference_agent/utils.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/reference_agent 2025-12-03T08:59:51,324 copying build/lib/CASSIA/agents/reference_agent/section_extractor.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/reference_agent 2025-12-03T08:59:51,327 copying build/lib/CASSIA/agents/reference_agent/reference_agent.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/reference_agent 2025-12-03T08:59:51,330 copying build/lib/CASSIA/agents/reference_agent/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/reference_agent 2025-12-03T08:59:51,333 creating build/bdist.linux-armv7l/wheel/CASSIA/agents/subclustering 2025-12-03T08:59:51,334 copying build/lib/CASSIA/agents/subclustering/subclustering.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/subclustering 2025-12-03T08:59:51,338 copying build/lib/CASSIA/agents/subclustering/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/subclustering 2025-12-03T08:59:51,341 creating build/bdist.linux-armv7l/wheel/CASSIA/agents/annotation_boost 2025-12-03T08:59:51,342 copying build/lib/CASSIA/agents/annotation_boost/super_annotation_boost.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/annotation_boost 2025-12-03T08:59:51,349 copying build/lib/CASSIA/agents/annotation_boost/annotation_boost.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/annotation_boost 2025-12-03T08:59:51,353 copying build/lib/CASSIA/agents/annotation_boost/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/annotation_boost 2025-12-03T08:59:51,355 creating build/bdist.linux-armv7l/wheel/CASSIA/agents/merging 2025-12-03T08:59:51,357 copying build/lib/CASSIA/agents/merging/merging_annotation.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/merging 2025-12-03T08:59:51,359 copying build/lib/CASSIA/agents/merging/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/merging 2025-12-03T08:59:51,361 copying build/lib/CASSIA/agents/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents 2025-12-03T08:59:51,363 creating build/bdist.linux-armv7l/wheel/CASSIA/agents/uncertainty 2025-12-03T08:59:51,365 copying build/lib/CASSIA/agents/uncertainty/Uncertainty_quantification.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/uncertainty 2025-12-03T08:59:51,368 copying build/lib/CASSIA/agents/uncertainty/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/uncertainty 2025-12-03T08:59:51,370 copying build/lib/CASSIA/CASSIA_python_tutorial.py -> build/bdist.linux-armv7l/wheel/./CASSIA 2025-12-03T08:59:51,374 running install_egg_info 2025-12-03T08:59:51,408 Copying CASSIA.egg-info to build/bdist.linux-armv7l/wheel/./CASSIA-0.3.5-py3.11.egg-info 2025-12-03T08:59:51,418 running install_scripts 2025-12-03T08:59:51,428 creating build/bdist.linux-armv7l/wheel/cassia-0.3.5.dist-info/WHEEL 2025-12-03T08:59:51,430 creating '/tmp/pip-wheel-xd3p0srf/cassia-0.3.5-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-12-03T08:59:51,443 adding 'CASSIA/CASSIA_python_tutorial.py' 2025-12-03T08:59:51,445 adding 'CASSIA/LLM_evaluation_getscore.py' 2025-12-03T08:59:51,449 adding 'CASSIA/LLM_evaluation_test.py' 2025-12-03T08:59:51,451 adding 'CASSIA/__init__.py' 2025-12-03T08:59:51,454 adding 'CASSIA/generate_comparison.py' 2025-12-03T08:59:51,456 adding 'CASSIA/run_full_test.py' 2025-12-03T08:59:51,458 adding 'CASSIA/agents/__init__.py' 2025-12-03T08:59:51,460 adding 'CASSIA/agents/annotation_boost/__init__.py' 2025-12-03T08:59:51,470 adding 'CASSIA/agents/annotation_boost/annotation_boost.py' 2025-12-03T08:59:51,484 adding 'CASSIA/agents/annotation_boost/super_annotation_boost.py' 2025-12-03T08:59:51,487 adding 'CASSIA/agents/merging/__init__.py' 2025-12-03T08:59:51,489 adding 'CASSIA/agents/merging/merging_annotation.py' 2025-12-03T08:59:51,491 adding 'CASSIA/agents/reference_agent/__init__.py' 2025-12-03T08:59:51,494 adding 'CASSIA/agents/reference_agent/complexity_scorer.py' 2025-12-03T08:59:51,496 adding 'CASSIA/agents/reference_agent/reference_agent.py' 2025-12-03T08:59:51,499 adding 'CASSIA/agents/reference_agent/reference_selector.py' 2025-12-03T08:59:51,501 adding 'CASSIA/agents/reference_agent/section_extractor.py' 2025-12-03T08:59:51,503 adding 'CASSIA/agents/reference_agent/utils.py' 2025-12-03T08:59:51,505 adding 'CASSIA/agents/subclustering/__init__.py' 2025-12-03T08:59:51,509 adding 'CASSIA/agents/subclustering/subclustering.py' 2025-12-03T08:59:51,517 adding 'CASSIA/agents/uncertainty/Uncertainty_quantification.py' 2025-12-03T08:59:51,519 adding 'CASSIA/agents/uncertainty/__init__.py' 2025-12-03T08:59:51,521 adding 'CASSIA/comparison/__init__.py' 2025-12-03T08:59:51,523 adding 'CASSIA/comparison/symphony_compare.py' 2025-12-03T08:59:51,525 adding 'CASSIA/config/__init__.py' 2025-12-03T08:59:51,527 adding 'CASSIA/config/set_api_keys.py' 2025-12-03T08:59:51,529 adding 'CASSIA/core/__init__.py' 2025-12-03T08:59:51,530 adding 'CASSIA/core/exceptions.py' 2025-12-03T08:59:51,532 adding 'CASSIA/core/llm_utils.py' 2025-12-03T08:59:51,534 adding 'CASSIA/core/logging_config.py' 2025-12-03T08:59:51,536 adding 'CASSIA/core/marker_utils.py' 2025-12-03T08:59:51,539 adding 'CASSIA/core/model_settings.py' 2025-12-03T08:59:51,541 adding 'CASSIA/core/progress_tracker.py' 2025-12-03T08:59:51,543 adding 'CASSIA/core/utils.py' 2025-12-03T08:59:51,546 adding 'CASSIA/core/validation.py' 2025-12-03T08:59:51,548 adding 'CASSIA/data/__init__.py' 2025-12-03T08:59:51,550 adding 'CASSIA/data/processed.csv' 2025-12-03T08:59:51,580 adding 'CASSIA/data/subcluster_results.csv' 2025-12-03T08:59:52,279 adding 'CASSIA/data/unprocessed.csv' 2025-12-03T08:59:52,303 adding 'CASSIA/engine/__init__.py' 2025-12-03T08:59:52,305 adding 'CASSIA/engine/main_function_code.py' 2025-12-03T08:59:52,309 adding 'CASSIA/engine/tools_function.py' 2025-12-03T08:59:52,316 adding 'CASSIA/evaluation/LLM_evaluation.py' 2025-12-03T08:59:52,317 adding 'CASSIA/evaluation/__init__.py' 2025-12-03T08:59:52,321 adding 'CASSIA/evaluation/cell_type_comparison.py' 2025-12-03T08:59:52,324 adding 'CASSIA/evaluation/scoring.py' 2025-12-03T08:59:52,326 adding 'CASSIA/hypothesis/__init__.py' 2025-12-03T08:59:52,328 adding 'CASSIA/hypothesis/hypothesis_generation.py' 2025-12-03T08:59:52,330 adding 'CASSIA/hypothesis/summarize_hypothesis_runs.py' 2025-12-03T08:59:52,331 adding 'CASSIA/imaging/__init__.py' 2025-12-03T08:59:52,333 adding 'CASSIA/imaging/llm_image.py' 2025-12-03T08:59:52,335 adding 'CASSIA/pipeline/__init__.py' 2025-12-03T08:59:52,337 adding 'CASSIA/pipeline/pipeline.py' 2025-12-03T08:59:52,339 adding 'CASSIA/reports/__init__.py' 2025-12-03T08:59:52,344 adding 'CASSIA/reports/generate_batch_report.py' 2025-12-03T08:59:52,346 adding 'CASSIA/reports/generate_hypothesis_report.py' 2025-12-03T08:59:52,349 adding 'CASSIA/reports/generate_report_uncertainty.py' 2025-12-03T08:59:52,354 adding 'CASSIA/reports/generate_reports.py' 2025-12-03T08:59:52,356 adding 'cassia-0.3.5.dist-info/METADATA' 2025-12-03T08:59:52,357 adding 'cassia-0.3.5.dist-info/WHEEL' 2025-12-03T08:59:52,358 adding 'cassia-0.3.5.dist-info/top_level.txt' 2025-12-03T08:59:52,360 adding 'cassia-0.3.5.dist-info/RECORD' 2025-12-03T08:59:52,378 removing build/bdist.linux-armv7l/wheel 2025-12-03T08:59:52,511 Building wheel for cassia (setup.py): finished with status 'done' 2025-12-03T08:59:52,529 Created wheel for cassia: filename=cassia-0.3.5-py3-none-any.whl size=1540197 sha256=af3c91956322241350567265d757d83c078426f108f51d83d4669528b768e525 2025-12-03T08:59:52,530 Stored in directory: /tmp/pip-ephem-wheel-cache-6t6gox2s/wheels/c3/ef/bf/0b86e114d6dff17f5d38f7141b249e6c7083f64fc09ae784ef 2025-12-03T08:59:52,543 Successfully built cassia 2025-12-03T08:59:52,588 Removed build tracker: '/tmp/pip-build-tracker-fbilccc9'