2025-12-03T10:12:17,055 Created temporary directory: /tmp/pip-ephem-wheel-cache-h9u5ubfs 2025-12-03T10:12:17,057 Created temporary directory: /tmp/pip-build-tracker-ogc11r3e 2025-12-03T10:12:17,058 Initialized build tracking at /tmp/pip-build-tracker-ogc11r3e 2025-12-03T10:12:17,058 Created build tracker: /tmp/pip-build-tracker-ogc11r3e 2025-12-03T10:12:17,059 Entered build tracker: /tmp/pip-build-tracker-ogc11r3e 2025-12-03T10:12:17,060 Created temporary directory: /tmp/pip-wheel-603_vw1y 2025-12-03T10:12:17,063 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2025-12-03T10:12:17,065 Created temporary directory: /tmp/pip-ephem-wheel-cache-6t5apu3m 2025-12-03T10:12:17,087 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-12-03T10:12:17,091 2 location(s) to search for versions of cassia: 2025-12-03T10:12:17,091 * https://pypi.org/simple/cassia/ 2025-12-03T10:12:17,091 * https://www.piwheels.org/simple/cassia/ 2025-12-03T10:12:17,092 Fetching project page and analyzing links: https://pypi.org/simple/cassia/ 2025-12-03T10:12:17,092 Getting page https://pypi.org/simple/cassia/ 2025-12-03T10:12:17,094 Found index url https://pypi.org/simple 2025-12-03T10:12:17,305 Fetched page https://pypi.org/simple/cassia/ as application/vnd.pypi.simple.v1+json 2025-12-03T10:12:17,313 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/fd/14/94da6522b1364498cddd2c537019fc450393500cdc692b689297115da8ec/CASSIA-0.1-py3-none-any.whl (from https://pypi.org/simple/cassia/) 2025-12-03T10:12:17,314 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/f7/1b/6997afb5835697ec0ef343b4ad8c02d0a29f3b86e89705d36ce76f95e311/CASSIA-0.1.0-py3-none-any.whl (from https://pypi.org/simple/cassia/) 2025-12-03T10:12:17,314 Found link https://files.pythonhosted.org/packages/26/97/db8e55429eee275f757c4447b74a395a0e5c21922c4f502d93f0977ae9b2/cassia-0.1.tar.gz (from https://pypi.org/simple/cassia/), version: 0.1 2025-12-03T10:12:17,315 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/bd/f9/d0cd59dd7ce3d19c2ffb54d448002a2396640796d331474044d229129192/CASSIA-0.1.1-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T10:12:17,316 Found link https://files.pythonhosted.org/packages/80/fa/494a5d4035fd6e11e7d80197728297196f244c54a072cf72d65ab0345b98/cassia-0.1.1.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.8), version: 0.1.1 2025-12-03T10:12:17,317 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/6f/d8/4900dc3805e66254667d349f4d51c8ac8a5342ca145785e5b9d0f80e3aa1/CASSIA-0.1.2-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T10:12:17,318 Found link https://files.pythonhosted.org/packages/36/6b/b9f052c0de80cfab4026b64a8c0a2042c46275aba336623484a3013233f8/cassia-0.1.2.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.8), version: 0.1.2 2025-12-03T10:12:17,319 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/dd/a7/23e6df5395de019994180ba12dfda49d85702fe01d3635ccf230133a76d5/CASSIA-0.1.3-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T10:12:17,320 Found link https://files.pythonhosted.org/packages/30/6c/a3d59df5aba1a664d3ec3494dfabc008a35f2391b095545c6de517345699/cassia-0.1.3.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.8), version: 0.1.3 2025-12-03T10:12:17,320 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/73/95/c7a43ea77725d76db542aa209815aade50c2a857c320aa49a30d9b30311b/CASSIA-0.1.4-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T10:12:17,321 Found link https://files.pythonhosted.org/packages/b8/ac/bfc205400bd5a1856ef48e20a56f78971cdb98f6b7681936d0a8d36c5ad9/cassia-0.1.4.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.8), version: 0.1.4 2025-12-03T10:12:17,322 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/58/a5/4c80ef7639de67ddcd728825d7c0054cb0f11ae6494e3c53b83ea0dd4a8c/CASSIA-0.1.5-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T10:12:17,323 Found link https://files.pythonhosted.org/packages/35/92/abce78e33564190569868bfa24fa1bb57197c46a56e245c04b674849c4ad/cassia-0.1.5.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.8), version: 0.1.5 2025-12-03T10:12:17,324 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/b7/da/dff3b6ffc6a6958de824b5ca680bc8d0543799343ccc4a45f2aae940941a/CASSIA-0.1.6-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T10:12:17,325 Found link https://files.pythonhosted.org/packages/e8/b6/f39d8bf9410a597b9ff10da7a4a8a67939aa2d33214d20db4d645a1cec44/cassia-0.1.6.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.8), version: 0.1.6 2025-12-03T10:12:17,325 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/96/1f/bb55e307a91d58477954d8786da585b9b4c4952bb3024a04cfe9461b9be9/CASSIA-0.1.7-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T10:12:17,326 Found link https://files.pythonhosted.org/packages/33/42/7ee57e8e2f32734268e4b486e0ea072869996ea2f0736fcc8502fbe28ccf/cassia-0.1.7.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.8), version: 0.1.7 2025-12-03T10:12:17,327 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/70/04/7c91cc5853ad95a37f922e401379f6b618ade43b11445eef018cfb436d56/CASSIA-0.1.8-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T10:12:17,328 Found link https://files.pythonhosted.org/packages/5d/16/7c43c97b5902f6fd7c1be4d726071a66cc65a2ba85880aba619f486d12a0/cassia-0.1.8.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.8), version: 0.1.8 2025-12-03T10:12:17,328 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/70/da/c5c1418310e8615c77ad99119af127f3ac2bdb21d5c69725df82583ca76e/CASSIA-0.1.9-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T10:12:17,329 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/5a/81/dd2738b5a33767ed19eee3c6add0bc13397e7bc1144e82f045762875feee/cassia-0.1.9-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T10:12:17,330 Found link https://files.pythonhosted.org/packages/fa/c4/1d279642d823e5fb7816e5dc0c9cf96b7256f3cabc3422762a1c64f9d5b4/cassia-0.1.9.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.8), version: 0.1.9 2025-12-03T10:12:17,331 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/4d/89/acd0978a3887e8b2fbf2d13dbf2cae3c19e3a08d0ddb2556775382b3be6b/cassia-0.2.0-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T10:12:17,331 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/8c/7d/3a7f158a1eaacbc08841d040134a21f9f1fbdfe6626957b1859bd2f9ab33/cassia-0.3.1.dev5-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.9) 2025-12-03T10:12:17,332 Found link https://files.pythonhosted.org/packages/cf/72/ca0b05784b7d668e4a4db6f638a3d7755898428d4db3e16b6cb050f6b6e2/cassia-0.3.1.dev5.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.9), version: 0.3.1.dev5 2025-12-03T10:12:17,333 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/d5/49/cf25a7220924c494be409d4fedc2a0033036e2ab5969c426fb23a5d68e71/cassia-0.3.1-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.9) 2025-12-03T10:12:17,334 Found link https://files.pythonhosted.org/packages/c0/87/f4a8fc33d6d1d21317d07ca08e896e88a14f444c822bbac3156303bcc324/cassia-0.3.1.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.9), version: 0.3.1 2025-12-03T10:12:17,335 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/09/cb/15b1522b479d1d3c9b9b0974cbcda929d1b461846216e19dcb3e21bb8992/cassia-0.3.2-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.9) 2025-12-03T10:12:17,336 Found link https://files.pythonhosted.org/packages/97/a3/cf67e557f6834ff73840c487e10a9f3da2984c5547c4fe78f533a8a4d81f/cassia-0.3.2.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.9), version: 0.3.2 2025-12-03T10:12:17,336 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/20/35/030a33b1893a65a3b683a1a0392b81759aeb812d1c056135e874b3861e21/cassia-0.3.3-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.9) 2025-12-03T10:12:17,337 Found link https://files.pythonhosted.org/packages/69/74/6cdb354fa394126745f6e9dbc376fc6155f7ee833c0f7a946158d9517509/cassia-0.3.3.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.9), version: 0.3.3 2025-12-03T10:12:17,338 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/9a/b9/9d8fda29887b36528dc22ffeed038b25693005575d7a0c6e84e0075e59d9/cassia-0.3.4-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.9) 2025-12-03T10:12:17,339 Found link https://files.pythonhosted.org/packages/0d/a5/d94c8cee96e48c358bd76554439bd8b6681c91b0d0bc3b7c371909e7fc2e/cassia-0.3.4.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.9), version: 0.3.4 2025-12-03T10:12:17,339 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/b7/2c/319ede09ec41c0418df38a3d57f8bf51743861bdb270d52886b73cfd70a9/cassia-0.3.5-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.9) 2025-12-03T10:12:17,340 Found link https://files.pythonhosted.org/packages/84/26/bc10df28dd2f72286acd1577cca585137f100ed63d73ad566c514e51e0d9/cassia-0.3.5.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.9), version: 0.3.5 2025-12-03T10:12:17,341 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/ce/be/89d5632034f289593e2c3272c2d7e9c3bb940f920af94d1f3c208ee59e73/cassia-0.3.6-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.9) 2025-12-03T10:12:17,341 Found link https://files.pythonhosted.org/packages/c0/c6/bfa4d08adf56c205601311780594b39845b3530bbb3c45d8fc5e260e3148/cassia-0.3.6.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.9), version: 0.3.6 2025-12-03T10:12:17,342 Fetching project page and analyzing links: https://www.piwheels.org/simple/cassia/ 2025-12-03T10:12:17,343 Getting page https://www.piwheels.org/simple/cassia/ 2025-12-03T10:12:17,344 Found index url https://www.piwheels.org/simple 2025-12-03T10:12:17,504 Fetched page https://www.piwheels.org/simple/cassia/ as text/html 2025-12-03T10:12:17,509 Skipping link: No binaries permitted for cassia: https://www.piwheels.org/simple/cassia/cassia-0.3.5-py3-none-any.whl#sha256=af3c91956322241350567265d757d83c078426f108f51d83d4669528b768e525 (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.9) 2025-12-03T10:12:17,510 Skipping link: No binaries permitted for cassia: https://www.piwheels.org/simple/cassia/cassia-0.3.4-py3-none-any.whl#sha256=ed435b05bb4b9391caf3ce05966c4b0797cfd57f7954ab9e8bfea9a0a57a10b0 (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.9) 2025-12-03T10:12:17,511 Skipping link: No binaries permitted for cassia: https://www.piwheels.org/simple/cassia/cassia-0.3.3-py3-none-any.whl#sha256=8e7163a499a36ef67a2a8582dac289c8db2919b9547f50cb58a2ec9f8fbe95f7 (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.9) 2025-12-03T10:12:17,511 Skipping link: No binaries permitted for cassia: https://www.piwheels.org/simple/cassia/cassia-0.3.2-py3-none-any.whl#sha256=cfc4a3f0168f9bf5ff3b3e0599b3f6115003e76644a7d33ec72fb2a18418234e (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.9) 2025-12-03T10:12:17,512 Skipping link: No binaries permitted for cassia: https://www.piwheels.org/simple/cassia/cassia-0.3.1-py3-none-any.whl#sha256=23c05779907a878e9671bb268e9c289efeef9aae12d9fed32f154bab4801e7dc (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.9) 2025-12-03T10:12:17,513 Skipping link: No binaries permitted for cassia: https://www.piwheels.org/simple/cassia/cassia-0.3.1.dev5-py3-none-any.whl#sha256=a05494df3be28005ecfe1dbbf97be4915253c487124e6a21d8da527bfd0fae87 (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.9) 2025-12-03T10:12:17,513 Skipping link: No binaries permitted for cassia: https://archive1.piwheels.org/simple/cassia/CASSIA-0.1.9-py3-none-any.whl#sha256=4c587602b1448b8326ae2da0164231e380dafd18476e24c360e0d5feab208609 (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T10:12:17,514 Skipping link: No binaries permitted for cassia: https://archive1.piwheels.org/simple/cassia/CASSIA-0.1.8-py3-none-any.whl#sha256=cef2f4adcf97a44f0f82dd394894647453f715df43e0f5856d81585be13c751b (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T10:12:17,514 Skipping link: No binaries permitted for cassia: https://archive1.piwheels.org/simple/cassia/CASSIA-0.1.7-py3-none-any.whl#sha256=46ffccf6ecab46768cce8957600e3f5bb1acb23dbcca70881c3ab046159e76a6 (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T10:12:17,515 Skipping link: No binaries permitted for cassia: https://archive1.piwheels.org/simple/cassia/CASSIA-0.1.6-py3-none-any.whl#sha256=e677bff5ce5ec53e01b7f460be6137747a33b853bdacbb1fa3d11f02762ae789 (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T10:12:17,515 Skipping link: No binaries permitted for cassia: https://archive1.piwheels.org/simple/cassia/CASSIA-0.1.5-py3-none-any.whl#sha256=c1fa353a8507b7eca9619d54936424e38712e556ac918e547bb5404d1ad82fa3 (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T10:12:17,516 Skipping link: No binaries permitted for cassia: https://archive1.piwheels.org/simple/cassia/CASSIA-0.1.4-py3-none-any.whl#sha256=123d4ecb5c6db6bf550344141a0cdc4fc41e704b0a40f39833d42d413e0e023d (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T10:12:17,517 Skipping link: No binaries permitted for cassia: https://archive1.piwheels.org/simple/cassia/CASSIA-0.1.3-py3-none-any.whl#sha256=8199c427ae36776b6c0278e67653729e138fb30e0a7769a9d13a85457163cc56 (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T10:12:17,517 Skipping link: No binaries permitted for cassia: https://archive1.piwheels.org/simple/cassia/CASSIA-0.1.2-py3-none-any.whl#sha256=6d708d28ac90607cc607a0eef783d50c308e58d3b6033e859b1dd9b9e43e13a6 (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T10:12:17,518 Skipping link: No binaries permitted for cassia: https://archive1.piwheels.org/simple/cassia/CASSIA-0.1.1-py3-none-any.whl#sha256=dec9df705c4c727b15a27e8e00e5e5a596dfec5a1606399d07c55f3014e3966a (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T10:12:17,518 Skipping link: No binaries permitted for cassia: https://archive1.piwheels.org/simple/cassia/CASSIA-0.1-py3-none-any.whl#sha256=56cd7ee82de55f6979e4830559b1b507ee28ff730829f8effcbad8a045873a5a (from https://www.piwheels.org/simple/cassia/) 2025-12-03T10:12:17,519 Skipping link: not a file: https://www.piwheels.org/simple/cassia/ 2025-12-03T10:12:17,520 Skipping link: not a file: https://pypi.org/simple/cassia/ 2025-12-03T10:12:17,541 Given no hashes to check 1 links for project 'cassia': discarding no candidates 2025-12-03T10:12:17,559 Collecting cassia==0.3.6 2025-12-03T10:12:17,561 Created temporary directory: /tmp/pip-unpack-idu8pc_9 2025-12-03T10:12:17,786 Downloading cassia-0.3.6.tar.gz (1.5 MB) 2025-12-03T10:12:18,333 Added cassia==0.3.6 from https://files.pythonhosted.org/packages/c0/c6/bfa4d08adf56c205601311780594b39845b3530bbb3c45d8fc5e260e3148/cassia-0.3.6.tar.gz to build tracker '/tmp/pip-build-tracker-ogc11r3e' 2025-12-03T10:12:18,334 Running setup.py (path:/tmp/pip-wheel-603_vw1y/cassia_0d9e9876ab70402391311e5829227e95/setup.py) egg_info for package cassia 2025-12-03T10:12:18,335 Created temporary directory: /tmp/pip-pip-egg-info-bnts14si 2025-12-03T10:12:18,336 Preparing metadata (setup.py): started 2025-12-03T10:12:18,337 Running command python setup.py egg_info 2025-12-03T10:12:19,229 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-12-03T10:12:19,230 !! 2025-12-03T10:12:19,231 ******************************************************************************** 2025-12-03T10:12:19,231 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-12-03T10:12:19,232 License :: OSI Approved :: MIT License 2025-12-03T10:12:19,233 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-12-03T10:12:19,234 ******************************************************************************** 2025-12-03T10:12:19,235 !! 2025-12-03T10:12:19,235 self._finalize_license_expression() 2025-12-03T10:12:19,259 running egg_info 2025-12-03T10:12:19,287 creating /tmp/pip-pip-egg-info-bnts14si/CASSIA.egg-info 2025-12-03T10:12:19,288 writing /tmp/pip-pip-egg-info-bnts14si/CASSIA.egg-info/PKG-INFO 2025-12-03T10:12:19,292 writing dependency_links to /tmp/pip-pip-egg-info-bnts14si/CASSIA.egg-info/dependency_links.txt 2025-12-03T10:12:19,294 writing requirements to /tmp/pip-pip-egg-info-bnts14si/CASSIA.egg-info/requires.txt 2025-12-03T10:12:19,295 writing top-level names to /tmp/pip-pip-egg-info-bnts14si/CASSIA.egg-info/top_level.txt 2025-12-03T10:12:19,296 writing manifest file '/tmp/pip-pip-egg-info-bnts14si/CASSIA.egg-info/SOURCES.txt' 2025-12-03T10:12:19,405 reading manifest file '/tmp/pip-pip-egg-info-bnts14si/CASSIA.egg-info/SOURCES.txt' 2025-12-03T10:12:19,410 writing manifest file '/tmp/pip-pip-egg-info-bnts14si/CASSIA.egg-info/SOURCES.txt' 2025-12-03T10:12:19,519 Preparing metadata (setup.py): finished with status 'done' 2025-12-03T10:12:19,523 Source in /tmp/pip-wheel-603_vw1y/cassia_0d9e9876ab70402391311e5829227e95 has version 0.3.6, which satisfies requirement cassia==0.3.6 from https://files.pythonhosted.org/packages/c0/c6/bfa4d08adf56c205601311780594b39845b3530bbb3c45d8fc5e260e3148/cassia-0.3.6.tar.gz 2025-12-03T10:12:19,524 Removed cassia==0.3.6 from https://files.pythonhosted.org/packages/c0/c6/bfa4d08adf56c205601311780594b39845b3530bbb3c45d8fc5e260e3148/cassia-0.3.6.tar.gz from build tracker '/tmp/pip-build-tracker-ogc11r3e' 2025-12-03T10:12:19,531 Created temporary directory: /tmp/pip-unpack-53ugpr4y 2025-12-03T10:12:19,531 Building wheels for collected packages: cassia 2025-12-03T10:12:19,535 Created temporary directory: /tmp/pip-wheel-yf1xhc64 2025-12-03T10:12:19,536 Building wheel for cassia (setup.py): started 2025-12-03T10:12:19,537 Destination directory: /tmp/pip-wheel-yf1xhc64 2025-12-03T10:12:19,537 Running command python setup.py bdist_wheel 2025-12-03T10:12:20,382 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-12-03T10:12:20,383 !! 2025-12-03T10:12:20,384 ******************************************************************************** 2025-12-03T10:12:20,384 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-12-03T10:12:20,386 License :: OSI Approved :: MIT License 2025-12-03T10:12:20,387 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-12-03T10:12:20,387 ******************************************************************************** 2025-12-03T10:12:20,388 !! 2025-12-03T10:12:20,389 self._finalize_license_expression() 2025-12-03T10:12:20,389 running bdist_wheel 2025-12-03T10:12:20,526 running build 2025-12-03T10:12:20,526 running build_py 2025-12-03T10:12:20,559 creating build/lib/CASSIA 2025-12-03T10:12:20,561 copying CASSIA/LLM_evaluation_getscore.py -> build/lib/CASSIA 2025-12-03T10:12:20,564 copying CASSIA/LLM_evaluation_test.py -> build/lib/CASSIA 2025-12-03T10:12:20,567 copying CASSIA/__init__.py -> build/lib/CASSIA 2025-12-03T10:12:20,569 copying CASSIA/run_full_test.py -> build/lib/CASSIA 2025-12-03T10:12:20,572 copying CASSIA/generate_comparison.py -> build/lib/CASSIA 2025-12-03T10:12:20,575 copying CASSIA/CASSIA_python_tutorial.py -> build/lib/CASSIA 2025-12-03T10:12:20,580 creating build/lib/CASSIA/reports 2025-12-03T10:12:20,581 copying CASSIA/reports/generate_reports.py -> build/lib/CASSIA/reports 2025-12-03T10:12:20,585 copying CASSIA/reports/__init__.py -> build/lib/CASSIA/reports 2025-12-03T10:12:20,587 copying CASSIA/reports/generate_hypothesis_report.py -> build/lib/CASSIA/reports 2025-12-03T10:12:20,590 copying CASSIA/reports/generate_report_uncertainty.py -> build/lib/CASSIA/reports 2025-12-03T10:12:20,593 copying CASSIA/reports/generate_batch_report.py -> build/lib/CASSIA/reports 2025-12-03T10:12:20,598 creating build/lib/CASSIA/imaging 2025-12-03T10:12:20,599 copying CASSIA/imaging/__init__.py -> build/lib/CASSIA/imaging 2025-12-03T10:12:20,602 copying CASSIA/imaging/llm_image.py -> build/lib/CASSIA/imaging 2025-12-03T10:12:20,605 creating build/lib/CASSIA/config 2025-12-03T10:12:20,606 copying CASSIA/config/set_api_keys.py -> build/lib/CASSIA/config 2025-12-03T10:12:20,608 copying CASSIA/config/__init__.py -> build/lib/CASSIA/config 2025-12-03T10:12:20,611 creating build/lib/CASSIA/agents 2025-12-03T10:12:20,612 copying CASSIA/agents/__init__.py -> build/lib/CASSIA/agents 2025-12-03T10:12:20,614 creating build/lib/CASSIA/core 2025-12-03T10:12:20,616 copying CASSIA/core/validation.py -> build/lib/CASSIA/core 2025-12-03T10:12:20,619 copying CASSIA/core/logging_config.py -> build/lib/CASSIA/core 2025-12-03T10:12:20,622 copying CASSIA/core/progress_tracker.py -> build/lib/CASSIA/core 2025-12-03T10:12:20,624 copying CASSIA/core/__init__.py -> build/lib/CASSIA/core 2025-12-03T10:12:20,627 copying CASSIA/core/marker_utils.py -> build/lib/CASSIA/core 2025-12-03T10:12:20,630 copying CASSIA/core/model_settings.py -> build/lib/CASSIA/core 2025-12-03T10:12:20,633 copying CASSIA/core/utils.py -> build/lib/CASSIA/core 2025-12-03T10:12:20,636 copying CASSIA/core/llm_utils.py -> build/lib/CASSIA/core 2025-12-03T10:12:20,638 copying CASSIA/core/exceptions.py -> build/lib/CASSIA/core 2025-12-03T10:12:20,641 creating build/lib/CASSIA/data 2025-12-03T10:12:20,642 copying CASSIA/data/__init__.py -> build/lib/CASSIA/data 2025-12-03T10:12:20,645 creating build/lib/CASSIA/engine 2025-12-03T10:12:20,646 copying CASSIA/engine/tools_function.py -> build/lib/CASSIA/engine 2025-12-03T10:12:20,649 copying CASSIA/engine/main_function_code.py -> build/lib/CASSIA/engine 2025-12-03T10:12:20,652 copying CASSIA/engine/__init__.py -> build/lib/CASSIA/engine 2025-12-03T10:12:20,655 creating build/lib/CASSIA/evaluation 2025-12-03T10:12:20,656 copying CASSIA/evaluation/cell_type_comparison.py -> build/lib/CASSIA/evaluation 2025-12-03T10:12:20,660 copying CASSIA/evaluation/LLM_evaluation.py -> build/lib/CASSIA/evaluation 2025-12-03T10:12:20,663 copying CASSIA/evaluation/__init__.py -> build/lib/CASSIA/evaluation 2025-12-03T10:12:20,666 copying CASSIA/evaluation/scoring.py -> build/lib/CASSIA/evaluation 2025-12-03T10:12:20,669 creating build/lib/CASSIA/pipeline 2025-12-03T10:12:20,670 copying CASSIA/pipeline/__init__.py -> build/lib/CASSIA/pipeline 2025-12-03T10:12:20,673 copying CASSIA/pipeline/pipeline.py -> build/lib/CASSIA/pipeline 2025-12-03T10:12:20,677 creating build/lib/CASSIA/comparison 2025-12-03T10:12:20,678 copying CASSIA/comparison/symphony_compare.py -> build/lib/CASSIA/comparison 2025-12-03T10:12:20,681 copying CASSIA/comparison/__init__.py -> build/lib/CASSIA/comparison 2025-12-03T10:12:20,683 creating build/lib/CASSIA/hypothesis 2025-12-03T10:12:20,684 copying CASSIA/hypothesis/__init__.py -> build/lib/CASSIA/hypothesis 2025-12-03T10:12:20,686 copying CASSIA/hypothesis/hypothesis_generation.py -> build/lib/CASSIA/hypothesis 2025-12-03T10:12:20,689 copying CASSIA/hypothesis/summarize_hypothesis_runs.py -> build/lib/CASSIA/hypothesis 2025-12-03T10:12:20,691 creating build/lib/CASSIA/agents/uncertainty 2025-12-03T10:12:20,692 copying CASSIA/agents/uncertainty/__init__.py -> build/lib/CASSIA/agents/uncertainty 2025-12-03T10:12:20,694 copying CASSIA/agents/uncertainty/Uncertainty_quantification.py -> build/lib/CASSIA/agents/uncertainty 2025-12-03T10:12:20,698 creating build/lib/CASSIA/agents/merging 2025-12-03T10:12:20,700 copying CASSIA/agents/merging/merging_annotation.py -> build/lib/CASSIA/agents/merging 2025-12-03T10:12:20,703 copying CASSIA/agents/merging/__init__.py -> build/lib/CASSIA/agents/merging 2025-12-03T10:12:20,705 creating build/lib/CASSIA/agents/reference_agent 2025-12-03T10:12:20,707 copying CASSIA/agents/reference_agent/reference_selector.py -> build/lib/CASSIA/agents/reference_agent 2025-12-03T10:12:20,710 copying CASSIA/agents/reference_agent/reference_agent.py -> build/lib/CASSIA/agents/reference_agent 2025-12-03T10:12:20,713 copying CASSIA/agents/reference_agent/section_extractor.py -> build/lib/CASSIA/agents/reference_agent 2025-12-03T10:12:20,716 copying CASSIA/agents/reference_agent/__init__.py -> build/lib/CASSIA/agents/reference_agent 2025-12-03T10:12:20,718 copying CASSIA/agents/reference_agent/utils.py -> build/lib/CASSIA/agents/reference_agent 2025-12-03T10:12:20,721 copying CASSIA/agents/reference_agent/complexity_scorer.py -> build/lib/CASSIA/agents/reference_agent 2025-12-03T10:12:20,725 creating build/lib/CASSIA/agents/annotation_boost 2025-12-03T10:12:20,726 copying CASSIA/agents/annotation_boost/super_annotation_boost.py -> build/lib/CASSIA/agents/annotation_boost 2025-12-03T10:12:20,733 copying CASSIA/agents/annotation_boost/__init__.py -> build/lib/CASSIA/agents/annotation_boost 2025-12-03T10:12:20,736 copying CASSIA/agents/annotation_boost/annotation_boost.py -> build/lib/CASSIA/agents/annotation_boost 2025-12-03T10:12:20,741 creating build/lib/CASSIA/agents/subclustering 2025-12-03T10:12:20,742 copying CASSIA/agents/subclustering/__init__.py -> build/lib/CASSIA/agents/subclustering 2025-12-03T10:12:20,744 copying CASSIA/agents/subclustering/subclustering.py -> build/lib/CASSIA/agents/subclustering 2025-12-03T10:12:20,747 running egg_info 2025-12-03T10:12:20,777 writing CASSIA.egg-info/PKG-INFO 2025-12-03T10:12:20,781 writing dependency_links to CASSIA.egg-info/dependency_links.txt 2025-12-03T10:12:20,784 writing requirements to CASSIA.egg-info/requires.txt 2025-12-03T10:12:20,786 writing top-level names to CASSIA.egg-info/top_level.txt 2025-12-03T10:12:20,836 reading manifest file 'CASSIA.egg-info/SOURCES.txt' 2025-12-03T10:12:20,849 writing manifest file 'CASSIA.egg-info/SOURCES.txt' 2025-12-03T10:12:20,860 copying CASSIA/data/unprocessed.csv -> build/lib/CASSIA/data 2025-12-03T10:12:21,014 copying CASSIA/data/subcluster_results.csv -> build/lib/CASSIA/data 2025-12-03T10:12:21,019 copying CASSIA/data/processed.csv -> build/lib/CASSIA/data 2025-12-03T10:12:21,059 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2025-12-03T10:12:21,059 !! 2025-12-03T10:12:21,061 ******************************************************************************** 2025-12-03T10:12:21,061 Please avoid running ``setup.py`` directly. 2025-12-03T10:12:21,062 Instead, use pypa/build, pypa/installer or other 2025-12-03T10:12:21,063 standards-based tools. 2025-12-03T10:12:21,064 This deprecation is overdue, please update your project and remove deprecated 2025-12-03T10:12:21,064 calls to avoid build errors in the future. 2025-12-03T10:12:21,065 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2025-12-03T10:12:21,065 ******************************************************************************** 2025-12-03T10:12:21,066 !! 2025-12-03T10:12:21,067 self.initialize_options() 2025-12-03T10:12:21,101 installing to build/bdist.linux-armv7l/wheel 2025-12-03T10:12:21,101 running install 2025-12-03T10:12:21,137 running install_lib 2025-12-03T10:12:21,173 creating build/bdist.linux-armv7l/wheel 2025-12-03T10:12:21,176 creating build/bdist.linux-armv7l/wheel/CASSIA 2025-12-03T10:12:21,178 creating build/bdist.linux-armv7l/wheel/CASSIA/reports 2025-12-03T10:12:21,179 copying build/lib/CASSIA/reports/generate_reports.py -> build/bdist.linux-armv7l/wheel/./CASSIA/reports 2025-12-03T10:12:21,183 copying build/lib/CASSIA/reports/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/reports 2025-12-03T10:12:21,185 copying build/lib/CASSIA/reports/generate_hypothesis_report.py -> build/bdist.linux-armv7l/wheel/./CASSIA/reports 2025-12-03T10:12:21,188 copying build/lib/CASSIA/reports/generate_report_uncertainty.py -> build/bdist.linux-armv7l/wheel/./CASSIA/reports 2025-12-03T10:12:21,191 copying build/lib/CASSIA/reports/generate_batch_report.py -> build/bdist.linux-armv7l/wheel/./CASSIA/reports 2025-12-03T10:12:21,194 copying build/lib/CASSIA/LLM_evaluation_getscore.py -> build/bdist.linux-armv7l/wheel/./CASSIA 2025-12-03T10:12:21,197 creating build/bdist.linux-armv7l/wheel/CASSIA/imaging 2025-12-03T10:12:21,199 copying build/lib/CASSIA/imaging/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/imaging 2025-12-03T10:12:21,201 copying build/lib/CASSIA/imaging/llm_image.py -> build/bdist.linux-armv7l/wheel/./CASSIA/imaging 2025-12-03T10:12:21,204 copying build/lib/CASSIA/LLM_evaluation_test.py -> build/bdist.linux-armv7l/wheel/./CASSIA 2025-12-03T10:12:21,207 creating build/bdist.linux-armv7l/wheel/CASSIA/config 2025-12-03T10:12:21,209 copying build/lib/CASSIA/config/set_api_keys.py -> build/bdist.linux-armv7l/wheel/./CASSIA/config 2025-12-03T10:12:21,211 copying build/lib/CASSIA/config/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/config 2025-12-03T10:12:21,214 creating build/bdist.linux-armv7l/wheel/CASSIA/agents 2025-12-03T10:12:21,215 creating build/bdist.linux-armv7l/wheel/CASSIA/agents/uncertainty 2025-12-03T10:12:21,217 copying build/lib/CASSIA/agents/uncertainty/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/uncertainty 2025-12-03T10:12:21,219 copying build/lib/CASSIA/agents/uncertainty/Uncertainty_quantification.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/uncertainty 2025-12-03T10:12:21,224 creating build/bdist.linux-armv7l/wheel/CASSIA/agents/merging 2025-12-03T10:12:21,226 copying build/lib/CASSIA/agents/merging/merging_annotation.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/merging 2025-12-03T10:12:21,229 copying build/lib/CASSIA/agents/merging/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/merging 2025-12-03T10:12:21,231 copying build/lib/CASSIA/agents/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents 2025-12-03T10:12:21,233 creating build/bdist.linux-armv7l/wheel/CASSIA/agents/reference_agent 2025-12-03T10:12:21,235 copying build/lib/CASSIA/agents/reference_agent/reference_selector.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/reference_agent 2025-12-03T10:12:21,238 copying build/lib/CASSIA/agents/reference_agent/reference_agent.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/reference_agent 2025-12-03T10:12:21,240 copying build/lib/CASSIA/agents/reference_agent/section_extractor.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/reference_agent 2025-12-03T10:12:21,244 copying build/lib/CASSIA/agents/reference_agent/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/reference_agent 2025-12-03T10:12:21,246 copying build/lib/CASSIA/agents/reference_agent/utils.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/reference_agent 2025-12-03T10:12:21,248 copying build/lib/CASSIA/agents/reference_agent/complexity_scorer.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/reference_agent 2025-12-03T10:12:21,252 creating build/bdist.linux-armv7l/wheel/CASSIA/agents/annotation_boost 2025-12-03T10:12:21,254 copying build/lib/CASSIA/agents/annotation_boost/super_annotation_boost.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/annotation_boost 2025-12-03T10:12:21,259 copying build/lib/CASSIA/agents/annotation_boost/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/annotation_boost 2025-12-03T10:12:21,261 copying build/lib/CASSIA/agents/annotation_boost/annotation_boost.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/annotation_boost 2025-12-03T10:12:21,267 creating build/bdist.linux-armv7l/wheel/CASSIA/agents/subclustering 2025-12-03T10:12:21,268 copying build/lib/CASSIA/agents/subclustering/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/subclustering 2025-12-03T10:12:21,271 copying build/lib/CASSIA/agents/subclustering/subclustering.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/subclustering 2025-12-03T10:12:21,274 creating build/bdist.linux-armv7l/wheel/CASSIA/core 2025-12-03T10:12:21,276 copying build/lib/CASSIA/core/validation.py -> build/bdist.linux-armv7l/wheel/./CASSIA/core 2025-12-03T10:12:21,279 copying build/lib/CASSIA/core/logging_config.py -> build/bdist.linux-armv7l/wheel/./CASSIA/core 2025-12-03T10:12:21,281 copying build/lib/CASSIA/core/progress_tracker.py -> build/bdist.linux-armv7l/wheel/./CASSIA/core 2025-12-03T10:12:21,284 copying build/lib/CASSIA/core/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/core 2025-12-03T10:12:21,286 copying build/lib/CASSIA/core/marker_utils.py -> build/bdist.linux-armv7l/wheel/./CASSIA/core 2025-12-03T10:12:21,289 copying build/lib/CASSIA/core/model_settings.py -> build/bdist.linux-armv7l/wheel/./CASSIA/core 2025-12-03T10:12:21,292 copying build/lib/CASSIA/core/utils.py -> build/bdist.linux-armv7l/wheel/./CASSIA/core 2025-12-03T10:12:21,294 copying build/lib/CASSIA/core/llm_utils.py -> build/bdist.linux-armv7l/wheel/./CASSIA/core 2025-12-03T10:12:21,297 copying build/lib/CASSIA/core/exceptions.py -> build/bdist.linux-armv7l/wheel/./CASSIA/core 2025-12-03T10:12:21,300 creating build/bdist.linux-armv7l/wheel/CASSIA/data 2025-12-03T10:12:21,302 copying build/lib/CASSIA/data/unprocessed.csv -> build/bdist.linux-armv7l/wheel/./CASSIA/data 2025-12-03T10:12:21,440 copying build/lib/CASSIA/data/subcluster_results.csv -> build/bdist.linux-armv7l/wheel/./CASSIA/data 2025-12-03T10:12:21,444 copying build/lib/CASSIA/data/processed.csv -> build/bdist.linux-armv7l/wheel/./CASSIA/data 2025-12-03T10:12:21,446 copying build/lib/CASSIA/data/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/data 2025-12-03T10:12:21,448 copying build/lib/CASSIA/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA 2025-12-03T10:12:21,451 creating build/bdist.linux-armv7l/wheel/CASSIA/engine 2025-12-03T10:12:21,452 copying build/lib/CASSIA/engine/tools_function.py -> build/bdist.linux-armv7l/wheel/./CASSIA/engine 2025-12-03T10:12:21,455 copying build/lib/CASSIA/engine/main_function_code.py -> build/bdist.linux-armv7l/wheel/./CASSIA/engine 2025-12-03T10:12:21,458 copying build/lib/CASSIA/engine/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/engine 2025-12-03T10:12:21,461 creating build/bdist.linux-armv7l/wheel/CASSIA/evaluation 2025-12-03T10:12:21,462 copying build/lib/CASSIA/evaluation/cell_type_comparison.py -> build/bdist.linux-armv7l/wheel/./CASSIA/evaluation 2025-12-03T10:12:21,465 copying build/lib/CASSIA/evaluation/LLM_evaluation.py -> build/bdist.linux-armv7l/wheel/./CASSIA/evaluation 2025-12-03T10:12:21,469 copying build/lib/CASSIA/evaluation/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/evaluation 2025-12-03T10:12:21,471 copying build/lib/CASSIA/evaluation/scoring.py -> build/bdist.linux-armv7l/wheel/./CASSIA/evaluation 2025-12-03T10:12:21,473 copying build/lib/CASSIA/run_full_test.py -> build/bdist.linux-armv7l/wheel/./CASSIA 2025-12-03T10:12:21,476 creating build/bdist.linux-armv7l/wheel/CASSIA/pipeline 2025-12-03T10:12:21,477 copying build/lib/CASSIA/pipeline/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/pipeline 2025-12-03T10:12:21,479 copying build/lib/CASSIA/pipeline/pipeline.py -> build/bdist.linux-armv7l/wheel/./CASSIA/pipeline 2025-12-03T10:12:21,482 copying build/lib/CASSIA/generate_comparison.py -> build/bdist.linux-armv7l/wheel/./CASSIA 2025-12-03T10:12:21,485 creating build/bdist.linux-armv7l/wheel/CASSIA/comparison 2025-12-03T10:12:21,486 copying build/lib/CASSIA/comparison/symphony_compare.py -> build/bdist.linux-armv7l/wheel/./CASSIA/comparison 2025-12-03T10:12:21,489 copying build/lib/CASSIA/comparison/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/comparison 2025-12-03T10:12:21,491 creating build/bdist.linux-armv7l/wheel/CASSIA/hypothesis 2025-12-03T10:12:21,492 copying build/lib/CASSIA/hypothesis/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/hypothesis 2025-12-03T10:12:21,494 copying build/lib/CASSIA/hypothesis/hypothesis_generation.py -> build/bdist.linux-armv7l/wheel/./CASSIA/hypothesis 2025-12-03T10:12:21,497 copying build/lib/CASSIA/hypothesis/summarize_hypothesis_runs.py -> build/bdist.linux-armv7l/wheel/./CASSIA/hypothesis 2025-12-03T10:12:21,499 copying build/lib/CASSIA/CASSIA_python_tutorial.py -> build/bdist.linux-armv7l/wheel/./CASSIA 2025-12-03T10:12:21,504 running install_egg_info 2025-12-03T10:12:21,540 Copying CASSIA.egg-info to build/bdist.linux-armv7l/wheel/./CASSIA-0.3.6-py3.11.egg-info 2025-12-03T10:12:21,554 running install_scripts 2025-12-03T10:12:21,567 creating build/bdist.linux-armv7l/wheel/cassia-0.3.6.dist-info/WHEEL 2025-12-03T10:12:21,570 creating '/tmp/pip-wheel-yf1xhc64/cassia-0.3.6-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-12-03T10:12:21,582 adding 'CASSIA/CASSIA_python_tutorial.py' 2025-12-03T10:12:21,584 adding 'CASSIA/LLM_evaluation_getscore.py' 2025-12-03T10:12:21,588 adding 'CASSIA/LLM_evaluation_test.py' 2025-12-03T10:12:21,589 adding 'CASSIA/__init__.py' 2025-12-03T10:12:21,592 adding 'CASSIA/generate_comparison.py' 2025-12-03T10:12:21,594 adding 'CASSIA/run_full_test.py' 2025-12-03T10:12:21,596 adding 'CASSIA/agents/__init__.py' 2025-12-03T10:12:21,597 adding 'CASSIA/agents/annotation_boost/__init__.py' 2025-12-03T10:12:21,608 adding 'CASSIA/agents/annotation_boost/annotation_boost.py' 2025-12-03T10:12:21,621 adding 'CASSIA/agents/annotation_boost/super_annotation_boost.py' 2025-12-03T10:12:21,624 adding 'CASSIA/agents/merging/__init__.py' 2025-12-03T10:12:21,626 adding 'CASSIA/agents/merging/merging_annotation.py' 2025-12-03T10:12:21,628 adding 'CASSIA/agents/reference_agent/__init__.py' 2025-12-03T10:12:21,630 adding 'CASSIA/agents/reference_agent/complexity_scorer.py' 2025-12-03T10:12:21,633 adding 'CASSIA/agents/reference_agent/reference_agent.py' 2025-12-03T10:12:21,635 adding 'CASSIA/agents/reference_agent/reference_selector.py' 2025-12-03T10:12:21,637 adding 'CASSIA/agents/reference_agent/section_extractor.py' 2025-12-03T10:12:21,638 adding 'CASSIA/agents/reference_agent/utils.py' 2025-12-03T10:12:21,640 adding 'CASSIA/agents/subclustering/__init__.py' 2025-12-03T10:12:21,644 adding 'CASSIA/agents/subclustering/subclustering.py' 2025-12-03T10:12:21,652 adding 'CASSIA/agents/uncertainty/Uncertainty_quantification.py' 2025-12-03T10:12:21,653 adding 'CASSIA/agents/uncertainty/__init__.py' 2025-12-03T10:12:21,655 adding 'CASSIA/comparison/__init__.py' 2025-12-03T10:12:21,658 adding 'CASSIA/comparison/symphony_compare.py' 2025-12-03T10:12:21,660 adding 'CASSIA/config/__init__.py' 2025-12-03T10:12:21,661 adding 'CASSIA/config/set_api_keys.py' 2025-12-03T10:12:21,663 adding 'CASSIA/core/__init__.py' 2025-12-03T10:12:21,664 adding 'CASSIA/core/exceptions.py' 2025-12-03T10:12:21,666 adding 'CASSIA/core/llm_utils.py' 2025-12-03T10:12:21,667 adding 'CASSIA/core/logging_config.py' 2025-12-03T10:12:21,669 adding 'CASSIA/core/marker_utils.py' 2025-12-03T10:12:21,671 adding 'CASSIA/core/model_settings.py' 2025-12-03T10:12:21,673 adding 'CASSIA/core/progress_tracker.py' 2025-12-03T10:12:21,674 adding 'CASSIA/core/utils.py' 2025-12-03T10:12:21,677 adding 'CASSIA/core/validation.py' 2025-12-03T10:12:21,679 adding 'CASSIA/data/__init__.py' 2025-12-03T10:12:21,680 adding 'CASSIA/data/processed.csv' 2025-12-03T10:12:21,710 adding 'CASSIA/data/subcluster_results.csv' 2025-12-03T10:12:22,360 adding 'CASSIA/data/unprocessed.csv' 2025-12-03T10:12:22,384 adding 'CASSIA/engine/__init__.py' 2025-12-03T10:12:22,387 adding 'CASSIA/engine/main_function_code.py' 2025-12-03T10:12:22,391 adding 'CASSIA/engine/tools_function.py' 2025-12-03T10:12:22,397 adding 'CASSIA/evaluation/LLM_evaluation.py' 2025-12-03T10:12:22,399 adding 'CASSIA/evaluation/__init__.py' 2025-12-03T10:12:22,403 adding 'CASSIA/evaluation/cell_type_comparison.py' 2025-12-03T10:12:22,405 adding 'CASSIA/evaluation/scoring.py' 2025-12-03T10:12:22,407 adding 'CASSIA/hypothesis/__init__.py' 2025-12-03T10:12:22,409 adding 'CASSIA/hypothesis/hypothesis_generation.py' 2025-12-03T10:12:22,411 adding 'CASSIA/hypothesis/summarize_hypothesis_runs.py' 2025-12-03T10:12:22,413 adding 'CASSIA/imaging/__init__.py' 2025-12-03T10:12:22,415 adding 'CASSIA/imaging/llm_image.py' 2025-12-03T10:12:22,416 adding 'CASSIA/pipeline/__init__.py' 2025-12-03T10:12:22,419 adding 'CASSIA/pipeline/pipeline.py' 2025-12-03T10:12:22,421 adding 'CASSIA/reports/__init__.py' 2025-12-03T10:12:22,425 adding 'CASSIA/reports/generate_batch_report.py' 2025-12-03T10:12:22,427 adding 'CASSIA/reports/generate_hypothesis_report.py' 2025-12-03T10:12:22,431 adding 'CASSIA/reports/generate_report_uncertainty.py' 2025-12-03T10:12:22,436 adding 'CASSIA/reports/generate_reports.py' 2025-12-03T10:12:22,438 adding 'cassia-0.3.6.dist-info/METADATA' 2025-12-03T10:12:22,439 adding 'cassia-0.3.6.dist-info/WHEEL' 2025-12-03T10:12:22,440 adding 'cassia-0.3.6.dist-info/top_level.txt' 2025-12-03T10:12:22,442 adding 'cassia-0.3.6.dist-info/RECORD' 2025-12-03T10:12:22,459 removing build/bdist.linux-armv7l/wheel 2025-12-03T10:12:22,590 Building wheel for cassia (setup.py): finished with status 'done' 2025-12-03T10:12:22,608 Created wheel for cassia: filename=cassia-0.3.6-py3-none-any.whl size=1540038 sha256=301a55edf344097d6e9be36c99b01b4aaefe27fc59b5e61c0418be0a8a269d0b 2025-12-03T10:12:22,610 Stored in directory: /tmp/pip-ephem-wheel-cache-6t5apu3m/wheels/0a/d2/17/92f524cb7589b44d4eea87e3a21097c43f907753ead3dc58db 2025-12-03T10:12:22,623 Successfully built cassia 2025-12-03T10:12:22,663 Removed build tracker: '/tmp/pip-build-tracker-ogc11r3e'