2025-12-03T23:47:53,904 Created temporary directory: /tmp/pip-ephem-wheel-cache-5914izv8 2025-12-03T23:47:53,906 Created temporary directory: /tmp/pip-build-tracker-1ehc5qjx 2025-12-03T23:47:53,907 Initialized build tracking at /tmp/pip-build-tracker-1ehc5qjx 2025-12-03T23:47:53,907 Created build tracker: /tmp/pip-build-tracker-1ehc5qjx 2025-12-03T23:47:53,908 Entered build tracker: /tmp/pip-build-tracker-1ehc5qjx 2025-12-03T23:47:53,909 Created temporary directory: /tmp/pip-wheel-_k38vy65 2025-12-03T23:47:53,912 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2025-12-03T23:47:53,914 Created temporary directory: /tmp/pip-ephem-wheel-cache-il_hdwa7 2025-12-03T23:47:53,936 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-12-03T23:47:53,939 2 location(s) to search for versions of cassia: 2025-12-03T23:47:53,939 * https://pypi.org/simple/cassia/ 2025-12-03T23:47:53,939 * https://www.piwheels.org/simple/cassia/ 2025-12-03T23:47:53,940 Fetching project page and analyzing links: https://pypi.org/simple/cassia/ 2025-12-03T23:47:53,941 Getting page https://pypi.org/simple/cassia/ 2025-12-03T23:47:53,943 Found index url https://pypi.org/simple 2025-12-03T23:47:54,156 Fetched page https://pypi.org/simple/cassia/ as application/vnd.pypi.simple.v1+json 2025-12-03T23:47:54,164 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/fd/14/94da6522b1364498cddd2c537019fc450393500cdc692b689297115da8ec/CASSIA-0.1-py3-none-any.whl (from https://pypi.org/simple/cassia/) 2025-12-03T23:47:54,164 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/f7/1b/6997afb5835697ec0ef343b4ad8c02d0a29f3b86e89705d36ce76f95e311/CASSIA-0.1.0-py3-none-any.whl (from https://pypi.org/simple/cassia/) 2025-12-03T23:47:54,165 Found link https://files.pythonhosted.org/packages/26/97/db8e55429eee275f757c4447b74a395a0e5c21922c4f502d93f0977ae9b2/cassia-0.1.tar.gz (from https://pypi.org/simple/cassia/), version: 0.1 2025-12-03T23:47:54,166 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/bd/f9/d0cd59dd7ce3d19c2ffb54d448002a2396640796d331474044d229129192/CASSIA-0.1.1-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T23:47:54,167 Found link https://files.pythonhosted.org/packages/80/fa/494a5d4035fd6e11e7d80197728297196f244c54a072cf72d65ab0345b98/cassia-0.1.1.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.8), version: 0.1.1 2025-12-03T23:47:54,168 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/6f/d8/4900dc3805e66254667d349f4d51c8ac8a5342ca145785e5b9d0f80e3aa1/CASSIA-0.1.2-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T23:47:54,169 Found link https://files.pythonhosted.org/packages/36/6b/b9f052c0de80cfab4026b64a8c0a2042c46275aba336623484a3013233f8/cassia-0.1.2.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.8), version: 0.1.2 2025-12-03T23:47:54,170 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/dd/a7/23e6df5395de019994180ba12dfda49d85702fe01d3635ccf230133a76d5/CASSIA-0.1.3-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T23:47:54,171 Found link https://files.pythonhosted.org/packages/30/6c/a3d59df5aba1a664d3ec3494dfabc008a35f2391b095545c6de517345699/cassia-0.1.3.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.8), version: 0.1.3 2025-12-03T23:47:54,171 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/73/95/c7a43ea77725d76db542aa209815aade50c2a857c320aa49a30d9b30311b/CASSIA-0.1.4-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T23:47:54,172 Found link https://files.pythonhosted.org/packages/b8/ac/bfc205400bd5a1856ef48e20a56f78971cdb98f6b7681936d0a8d36c5ad9/cassia-0.1.4.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.8), version: 0.1.4 2025-12-03T23:47:54,174 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/58/a5/4c80ef7639de67ddcd728825d7c0054cb0f11ae6494e3c53b83ea0dd4a8c/CASSIA-0.1.5-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T23:47:54,175 Found link https://files.pythonhosted.org/packages/35/92/abce78e33564190569868bfa24fa1bb57197c46a56e245c04b674849c4ad/cassia-0.1.5.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.8), version: 0.1.5 2025-12-03T23:47:54,176 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/b7/da/dff3b6ffc6a6958de824b5ca680bc8d0543799343ccc4a45f2aae940941a/CASSIA-0.1.6-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T23:47:54,177 Found link https://files.pythonhosted.org/packages/e8/b6/f39d8bf9410a597b9ff10da7a4a8a67939aa2d33214d20db4d645a1cec44/cassia-0.1.6.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.8), version: 0.1.6 2025-12-03T23:47:54,177 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/96/1f/bb55e307a91d58477954d8786da585b9b4c4952bb3024a04cfe9461b9be9/CASSIA-0.1.7-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T23:47:54,178 Found link https://files.pythonhosted.org/packages/33/42/7ee57e8e2f32734268e4b486e0ea072869996ea2f0736fcc8502fbe28ccf/cassia-0.1.7.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.8), version: 0.1.7 2025-12-03T23:47:54,179 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/70/04/7c91cc5853ad95a37f922e401379f6b618ade43b11445eef018cfb436d56/CASSIA-0.1.8-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T23:47:54,180 Found link https://files.pythonhosted.org/packages/5d/16/7c43c97b5902f6fd7c1be4d726071a66cc65a2ba85880aba619f486d12a0/cassia-0.1.8.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.8), version: 0.1.8 2025-12-03T23:47:54,181 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/70/da/c5c1418310e8615c77ad99119af127f3ac2bdb21d5c69725df82583ca76e/CASSIA-0.1.9-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T23:47:54,181 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/5a/81/dd2738b5a33767ed19eee3c6add0bc13397e7bc1144e82f045762875feee/cassia-0.1.9-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T23:47:54,182 Found link https://files.pythonhosted.org/packages/fa/c4/1d279642d823e5fb7816e5dc0c9cf96b7256f3cabc3422762a1c64f9d5b4/cassia-0.1.9.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.8), version: 0.1.9 2025-12-03T23:47:54,183 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/4d/89/acd0978a3887e8b2fbf2d13dbf2cae3c19e3a08d0ddb2556775382b3be6b/cassia-0.2.0-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T23:47:54,184 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/8c/7d/3a7f158a1eaacbc08841d040134a21f9f1fbdfe6626957b1859bd2f9ab33/cassia-0.3.1.dev5-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.9) 2025-12-03T23:47:54,185 Found link https://files.pythonhosted.org/packages/cf/72/ca0b05784b7d668e4a4db6f638a3d7755898428d4db3e16b6cb050f6b6e2/cassia-0.3.1.dev5.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.9), version: 0.3.1.dev5 2025-12-03T23:47:54,186 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/d5/49/cf25a7220924c494be409d4fedc2a0033036e2ab5969c426fb23a5d68e71/cassia-0.3.1-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.9) 2025-12-03T23:47:54,187 Found link https://files.pythonhosted.org/packages/c0/87/f4a8fc33d6d1d21317d07ca08e896e88a14f444c822bbac3156303bcc324/cassia-0.3.1.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.9), version: 0.3.1 2025-12-03T23:47:54,188 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/09/cb/15b1522b479d1d3c9b9b0974cbcda929d1b461846216e19dcb3e21bb8992/cassia-0.3.2-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.9) 2025-12-03T23:47:54,189 Found link https://files.pythonhosted.org/packages/97/a3/cf67e557f6834ff73840c487e10a9f3da2984c5547c4fe78f533a8a4d81f/cassia-0.3.2.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.9), version: 0.3.2 2025-12-03T23:47:54,189 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/20/35/030a33b1893a65a3b683a1a0392b81759aeb812d1c056135e874b3861e21/cassia-0.3.3-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.9) 2025-12-03T23:47:54,190 Found link https://files.pythonhosted.org/packages/69/74/6cdb354fa394126745f6e9dbc376fc6155f7ee833c0f7a946158d9517509/cassia-0.3.3.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.9), version: 0.3.3 2025-12-03T23:47:54,191 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/9a/b9/9d8fda29887b36528dc22ffeed038b25693005575d7a0c6e84e0075e59d9/cassia-0.3.4-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.9) 2025-12-03T23:47:54,191 Found link https://files.pythonhosted.org/packages/0d/a5/d94c8cee96e48c358bd76554439bd8b6681c91b0d0bc3b7c371909e7fc2e/cassia-0.3.4.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.9), version: 0.3.4 2025-12-03T23:47:54,192 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/b7/2c/319ede09ec41c0418df38a3d57f8bf51743861bdb270d52886b73cfd70a9/cassia-0.3.5-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.9) 2025-12-03T23:47:54,193 Found link https://files.pythonhosted.org/packages/84/26/bc10df28dd2f72286acd1577cca585137f100ed63d73ad566c514e51e0d9/cassia-0.3.5.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.9), version: 0.3.5 2025-12-03T23:47:54,194 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/ce/be/89d5632034f289593e2c3272c2d7e9c3bb940f920af94d1f3c208ee59e73/cassia-0.3.6-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.9) 2025-12-03T23:47:54,195 Found link https://files.pythonhosted.org/packages/c0/c6/bfa4d08adf56c205601311780594b39845b3530bbb3c45d8fc5e260e3148/cassia-0.3.6.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.9), version: 0.3.6 2025-12-03T23:47:54,195 Skipping link: No binaries permitted for cassia: https://files.pythonhosted.org/packages/c0/60/d5f5aa037e94c571d9c975382521d125dbe19b983b55e7a9deecf241b64c/cassia-0.3.7-py3-none-any.whl (from https://pypi.org/simple/cassia/) (requires-python:>=3.9) 2025-12-03T23:47:54,196 Found link https://files.pythonhosted.org/packages/33/8a/bb8b9dbcd57decacc1231e877c6fa5be97972f14131fca52c0c1821048af/cassia-0.3.7.tar.gz (from https://pypi.org/simple/cassia/) (requires-python:>=3.9), version: 0.3.7 2025-12-03T23:47:54,197 Fetching project page and analyzing links: https://www.piwheels.org/simple/cassia/ 2025-12-03T23:47:54,198 Getting page https://www.piwheels.org/simple/cassia/ 2025-12-03T23:47:54,199 Found index url https://www.piwheels.org/simple 2025-12-03T23:47:54,356 Fetched page https://www.piwheels.org/simple/cassia/ as text/html 2025-12-03T23:47:54,365 Skipping link: No binaries permitted for cassia: https://www.piwheels.org/simple/cassia/cassia-0.3.6-py3-none-any.whl#sha256=301a55edf344097d6e9be36c99b01b4aaefe27fc59b5e61c0418be0a8a269d0b (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.9) 2025-12-03T23:47:54,366 Skipping link: No binaries permitted for cassia: https://www.piwheels.org/simple/cassia/cassia-0.3.5-py3-none-any.whl#sha256=af3c91956322241350567265d757d83c078426f108f51d83d4669528b768e525 (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.9) 2025-12-03T23:47:54,367 Skipping link: No binaries permitted for cassia: https://www.piwheels.org/simple/cassia/cassia-0.3.4-py3-none-any.whl#sha256=ed435b05bb4b9391caf3ce05966c4b0797cfd57f7954ab9e8bfea9a0a57a10b0 (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.9) 2025-12-03T23:47:54,367 Skipping link: No binaries permitted for cassia: https://www.piwheels.org/simple/cassia/cassia-0.3.3-py3-none-any.whl#sha256=8e7163a499a36ef67a2a8582dac289c8db2919b9547f50cb58a2ec9f8fbe95f7 (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.9) 2025-12-03T23:47:54,368 Skipping link: No binaries permitted for cassia: https://www.piwheels.org/simple/cassia/cassia-0.3.2-py3-none-any.whl#sha256=cfc4a3f0168f9bf5ff3b3e0599b3f6115003e76644a7d33ec72fb2a18418234e (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.9) 2025-12-03T23:47:54,369 Skipping link: No binaries permitted for cassia: https://www.piwheels.org/simple/cassia/cassia-0.3.1-py3-none-any.whl#sha256=23c05779907a878e9671bb268e9c289efeef9aae12d9fed32f154bab4801e7dc (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.9) 2025-12-03T23:47:54,369 Skipping link: No binaries permitted for cassia: https://www.piwheels.org/simple/cassia/cassia-0.3.1.dev5-py3-none-any.whl#sha256=a05494df3be28005ecfe1dbbf97be4915253c487124e6a21d8da527bfd0fae87 (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.9) 2025-12-03T23:47:54,370 Skipping link: No binaries permitted for cassia: https://archive1.piwheels.org/simple/cassia/CASSIA-0.1.9-py3-none-any.whl#sha256=4c587602b1448b8326ae2da0164231e380dafd18476e24c360e0d5feab208609 (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T23:47:54,371 Skipping link: No binaries permitted for cassia: https://archive1.piwheels.org/simple/cassia/CASSIA-0.1.8-py3-none-any.whl#sha256=cef2f4adcf97a44f0f82dd394894647453f715df43e0f5856d81585be13c751b (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T23:47:54,371 Skipping link: No binaries permitted for cassia: https://archive1.piwheels.org/simple/cassia/CASSIA-0.1.7-py3-none-any.whl#sha256=46ffccf6ecab46768cce8957600e3f5bb1acb23dbcca70881c3ab046159e76a6 (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T23:47:54,372 Skipping link: No binaries permitted for cassia: https://archive1.piwheels.org/simple/cassia/CASSIA-0.1.6-py3-none-any.whl#sha256=e677bff5ce5ec53e01b7f460be6137747a33b853bdacbb1fa3d11f02762ae789 (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T23:47:54,373 Skipping link: No binaries permitted for cassia: https://archive1.piwheels.org/simple/cassia/CASSIA-0.1.5-py3-none-any.whl#sha256=c1fa353a8507b7eca9619d54936424e38712e556ac918e547bb5404d1ad82fa3 (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T23:47:54,374 Skipping link: No binaries permitted for cassia: https://archive1.piwheels.org/simple/cassia/CASSIA-0.1.4-py3-none-any.whl#sha256=123d4ecb5c6db6bf550344141a0cdc4fc41e704b0a40f39833d42d413e0e023d (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T23:47:54,374 Skipping link: No binaries permitted for cassia: https://archive1.piwheels.org/simple/cassia/CASSIA-0.1.3-py3-none-any.whl#sha256=8199c427ae36776b6c0278e67653729e138fb30e0a7769a9d13a85457163cc56 (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T23:47:54,375 Skipping link: No binaries permitted for cassia: https://archive1.piwheels.org/simple/cassia/CASSIA-0.1.2-py3-none-any.whl#sha256=6d708d28ac90607cc607a0eef783d50c308e58d3b6033e859b1dd9b9e43e13a6 (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T23:47:54,376 Skipping link: No binaries permitted for cassia: https://archive1.piwheels.org/simple/cassia/CASSIA-0.1.1-py3-none-any.whl#sha256=dec9df705c4c727b15a27e8e00e5e5a596dfec5a1606399d07c55f3014e3966a (from https://www.piwheels.org/simple/cassia/) (requires-python:>=3.8) 2025-12-03T23:47:54,377 Skipping link: No binaries permitted for cassia: https://archive1.piwheels.org/simple/cassia/CASSIA-0.1-py3-none-any.whl#sha256=56cd7ee82de55f6979e4830559b1b507ee28ff730829f8effcbad8a045873a5a (from https://www.piwheels.org/simple/cassia/) 2025-12-03T23:47:54,377 Skipping link: not a file: https://www.piwheels.org/simple/cassia/ 2025-12-03T23:47:54,378 Skipping link: not a file: https://pypi.org/simple/cassia/ 2025-12-03T23:47:54,408 Given no hashes to check 1 links for project 'cassia': discarding no candidates 2025-12-03T23:47:54,435 Collecting cassia==0.3.7 2025-12-03T23:47:54,438 Created temporary directory: /tmp/pip-unpack-u492f3fg 2025-12-03T23:47:54,671 Downloading cassia-0.3.7.tar.gz (1.5 MB) 2025-12-03T23:47:55,629 Added cassia==0.3.7 from https://files.pythonhosted.org/packages/33/8a/bb8b9dbcd57decacc1231e877c6fa5be97972f14131fca52c0c1821048af/cassia-0.3.7.tar.gz to build tracker '/tmp/pip-build-tracker-1ehc5qjx' 2025-12-03T23:47:55,631 Running setup.py (path:/tmp/pip-wheel-_k38vy65/cassia_79179c20b3be44699dea7b491cd9f6ee/setup.py) egg_info for package cassia 2025-12-03T23:47:55,632 Created temporary directory: /tmp/pip-pip-egg-info-85iyn9y_ 2025-12-03T23:47:55,632 Preparing metadata (setup.py): started 2025-12-03T23:47:55,634 Running command python setup.py egg_info 2025-12-03T23:47:56,522 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-12-03T23:47:56,523 !! 2025-12-03T23:47:56,524 ******************************************************************************** 2025-12-03T23:47:56,524 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-12-03T23:47:56,525 License :: OSI Approved :: MIT License 2025-12-03T23:47:56,527 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-12-03T23:47:56,527 ******************************************************************************** 2025-12-03T23:47:56,528 !! 2025-12-03T23:47:56,529 self._finalize_license_expression() 2025-12-03T23:47:56,553 running egg_info 2025-12-03T23:47:56,581 creating /tmp/pip-pip-egg-info-85iyn9y_/CASSIA.egg-info 2025-12-03T23:47:56,582 writing /tmp/pip-pip-egg-info-85iyn9y_/CASSIA.egg-info/PKG-INFO 2025-12-03T23:47:56,586 writing dependency_links to /tmp/pip-pip-egg-info-85iyn9y_/CASSIA.egg-info/dependency_links.txt 2025-12-03T23:47:56,588 writing requirements to /tmp/pip-pip-egg-info-85iyn9y_/CASSIA.egg-info/requires.txt 2025-12-03T23:47:56,589 writing top-level names to /tmp/pip-pip-egg-info-85iyn9y_/CASSIA.egg-info/top_level.txt 2025-12-03T23:47:56,591 writing manifest file '/tmp/pip-pip-egg-info-85iyn9y_/CASSIA.egg-info/SOURCES.txt' 2025-12-03T23:47:56,700 reading manifest file '/tmp/pip-pip-egg-info-85iyn9y_/CASSIA.egg-info/SOURCES.txt' 2025-12-03T23:47:56,705 writing manifest file '/tmp/pip-pip-egg-info-85iyn9y_/CASSIA.egg-info/SOURCES.txt' 2025-12-03T23:47:56,813 Preparing metadata (setup.py): finished with status 'done' 2025-12-03T23:47:56,817 Source in /tmp/pip-wheel-_k38vy65/cassia_79179c20b3be44699dea7b491cd9f6ee has version 0.3.7, which satisfies requirement cassia==0.3.7 from https://files.pythonhosted.org/packages/33/8a/bb8b9dbcd57decacc1231e877c6fa5be97972f14131fca52c0c1821048af/cassia-0.3.7.tar.gz 2025-12-03T23:47:56,818 Removed cassia==0.3.7 from https://files.pythonhosted.org/packages/33/8a/bb8b9dbcd57decacc1231e877c6fa5be97972f14131fca52c0c1821048af/cassia-0.3.7.tar.gz from build tracker '/tmp/pip-build-tracker-1ehc5qjx' 2025-12-03T23:47:56,825 Created temporary directory: /tmp/pip-unpack-z4rzh587 2025-12-03T23:47:56,826 Building wheels for collected packages: cassia 2025-12-03T23:47:56,830 Created temporary directory: /tmp/pip-wheel-g6o7gt9v 2025-12-03T23:47:56,831 Building wheel for cassia (setup.py): started 2025-12-03T23:47:56,832 Destination directory: /tmp/pip-wheel-g6o7gt9v 2025-12-03T23:47:56,833 Running command python setup.py bdist_wheel 2025-12-03T23:47:57,667 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-12-03T23:47:57,667 !! 2025-12-03T23:47:57,668 ******************************************************************************** 2025-12-03T23:47:57,669 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-12-03T23:47:57,669 License :: OSI Approved :: MIT License 2025-12-03T23:47:57,671 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-12-03T23:47:57,671 ******************************************************************************** 2025-12-03T23:47:57,672 !! 2025-12-03T23:47:57,673 self._finalize_license_expression() 2025-12-03T23:47:57,673 running bdist_wheel 2025-12-03T23:47:57,804 running build 2025-12-03T23:47:57,804 running build_py 2025-12-03T23:47:57,836 creating build/lib/CASSIA 2025-12-03T23:47:57,838 copying CASSIA/generate_comparison.py -> build/lib/CASSIA 2025-12-03T23:47:57,841 copying CASSIA/__init__.py -> build/lib/CASSIA 2025-12-03T23:47:57,843 copying CASSIA/LLM_evaluation_getscore.py -> build/lib/CASSIA 2025-12-03T23:47:57,846 copying CASSIA/CASSIA_python_tutorial.py -> build/lib/CASSIA 2025-12-03T23:47:57,849 copying CASSIA/run_full_test.py -> build/lib/CASSIA 2025-12-03T23:47:57,852 copying CASSIA/LLM_evaluation_test.py -> build/lib/CASSIA 2025-12-03T23:47:57,855 creating build/lib/CASSIA/comparison 2025-12-03T23:47:57,856 copying CASSIA/comparison/symphony_compare.py -> build/lib/CASSIA/comparison 2025-12-03T23:47:57,859 copying CASSIA/comparison/__init__.py -> build/lib/CASSIA/comparison 2025-12-03T23:47:57,861 creating build/lib/CASSIA/engine 2025-12-03T23:47:57,862 copying CASSIA/engine/main_function_code.py -> build/lib/CASSIA/engine 2025-12-03T23:47:57,865 copying CASSIA/engine/__init__.py -> build/lib/CASSIA/engine 2025-12-03T23:47:57,867 copying CASSIA/engine/tools_function.py -> build/lib/CASSIA/engine 2025-12-03T23:47:57,871 creating build/lib/CASSIA/agents 2025-12-03T23:47:57,872 copying CASSIA/agents/__init__.py -> build/lib/CASSIA/agents 2025-12-03T23:47:57,875 creating build/lib/CASSIA/evaluation 2025-12-03T23:47:57,876 copying CASSIA/evaluation/LLM_evaluation.py -> build/lib/CASSIA/evaluation 2025-12-03T23:47:57,879 copying CASSIA/evaluation/cell_type_comparison.py -> build/lib/CASSIA/evaluation 2025-12-03T23:47:57,883 copying CASSIA/evaluation/__init__.py -> build/lib/CASSIA/evaluation 2025-12-03T23:47:57,885 copying CASSIA/evaluation/scoring.py -> build/lib/CASSIA/evaluation 2025-12-03T23:47:57,888 creating build/lib/CASSIA/imaging 2025-12-03T23:47:57,889 copying CASSIA/imaging/llm_image.py -> build/lib/CASSIA/imaging 2025-12-03T23:47:57,892 copying CASSIA/imaging/__init__.py -> build/lib/CASSIA/imaging 2025-12-03T23:47:57,894 creating build/lib/CASSIA/config 2025-12-03T23:47:57,895 copying CASSIA/config/__init__.py -> build/lib/CASSIA/config 2025-12-03T23:47:57,897 copying CASSIA/config/set_api_keys.py -> build/lib/CASSIA/config 2025-12-03T23:47:57,900 creating build/lib/CASSIA/reports 2025-12-03T23:47:57,901 copying CASSIA/reports/generate_report_uncertainty.py -> build/lib/CASSIA/reports 2025-12-03T23:47:57,904 copying CASSIA/reports/generate_batch_report.py -> build/lib/CASSIA/reports 2025-12-03T23:47:57,908 copying CASSIA/reports/generate_reports.py -> build/lib/CASSIA/reports 2025-12-03T23:47:57,911 copying CASSIA/reports/__init__.py -> build/lib/CASSIA/reports 2025-12-03T23:47:57,913 copying CASSIA/reports/generate_hypothesis_report.py -> build/lib/CASSIA/reports 2025-12-03T23:47:57,916 creating build/lib/CASSIA/core 2025-12-03T23:47:57,917 copying CASSIA/core/model_settings.py -> build/lib/CASSIA/core 2025-12-03T23:47:57,920 copying CASSIA/core/llm_utils.py -> build/lib/CASSIA/core 2025-12-03T23:47:57,923 copying CASSIA/core/progress_tracker.py -> build/lib/CASSIA/core 2025-12-03T23:47:57,925 copying CASSIA/core/marker_utils.py -> build/lib/CASSIA/core 2025-12-03T23:47:57,928 copying CASSIA/core/validation.py -> build/lib/CASSIA/core 2025-12-03T23:47:57,931 copying CASSIA/core/__init__.py -> build/lib/CASSIA/core 2025-12-03T23:47:57,932 copying CASSIA/core/exceptions.py -> build/lib/CASSIA/core 2025-12-03T23:47:57,934 copying CASSIA/core/logging_config.py -> build/lib/CASSIA/core 2025-12-03T23:47:57,936 copying CASSIA/core/utils.py -> build/lib/CASSIA/core 2025-12-03T23:47:57,939 creating build/lib/CASSIA/pipeline 2025-12-03T23:47:57,940 copying CASSIA/pipeline/__init__.py -> build/lib/CASSIA/pipeline 2025-12-03T23:47:57,942 copying CASSIA/pipeline/pipeline.py -> build/lib/CASSIA/pipeline 2025-12-03T23:47:57,945 creating build/lib/CASSIA/hypothesis 2025-12-03T23:47:57,946 copying CASSIA/hypothesis/__init__.py -> build/lib/CASSIA/hypothesis 2025-12-03T23:47:57,948 copying CASSIA/hypothesis/summarize_hypothesis_runs.py -> build/lib/CASSIA/hypothesis 2025-12-03T23:47:57,950 copying CASSIA/hypothesis/hypothesis_generation.py -> build/lib/CASSIA/hypothesis 2025-12-03T23:47:57,953 creating build/lib/CASSIA/data 2025-12-03T23:47:57,954 copying CASSIA/data/__init__.py -> build/lib/CASSIA/data 2025-12-03T23:47:57,957 creating build/lib/CASSIA/agents/reference_agent 2025-12-03T23:47:57,958 copying CASSIA/agents/reference_agent/reference_agent.py -> build/lib/CASSIA/agents/reference_agent 2025-12-03T23:47:57,961 copying CASSIA/agents/reference_agent/reference_selector.py -> build/lib/CASSIA/agents/reference_agent 2025-12-03T23:47:57,963 copying CASSIA/agents/reference_agent/complexity_scorer.py -> build/lib/CASSIA/agents/reference_agent 2025-12-03T23:47:57,966 copying CASSIA/agents/reference_agent/__init__.py -> build/lib/CASSIA/agents/reference_agent 2025-12-03T23:47:57,968 copying CASSIA/agents/reference_agent/section_extractor.py -> build/lib/CASSIA/agents/reference_agent 2025-12-03T23:47:57,970 copying CASSIA/agents/reference_agent/utils.py -> build/lib/CASSIA/agents/reference_agent 2025-12-03T23:47:57,973 creating build/lib/CASSIA/agents/uncertainty 2025-12-03T23:47:57,974 copying CASSIA/agents/uncertainty/Uncertainty_quantification.py -> build/lib/CASSIA/agents/uncertainty 2025-12-03T23:47:57,978 copying CASSIA/agents/uncertainty/__init__.py -> build/lib/CASSIA/agents/uncertainty 2025-12-03T23:47:57,980 creating build/lib/CASSIA/agents/subclustering 2025-12-03T23:47:57,981 copying CASSIA/agents/subclustering/__init__.py -> build/lib/CASSIA/agents/subclustering 2025-12-03T23:47:57,983 copying CASSIA/agents/subclustering/subclustering.py -> build/lib/CASSIA/agents/subclustering 2025-12-03T23:47:57,986 creating build/lib/CASSIA/agents/annotation_boost 2025-12-03T23:47:57,987 copying CASSIA/agents/annotation_boost/super_annotation_boost.py -> build/lib/CASSIA/agents/annotation_boost 2025-12-03T23:47:57,993 copying CASSIA/agents/annotation_boost/__init__.py -> build/lib/CASSIA/agents/annotation_boost 2025-12-03T23:47:57,995 copying CASSIA/agents/annotation_boost/annotation_boost.py -> build/lib/CASSIA/agents/annotation_boost 2025-12-03T23:47:58,000 creating build/lib/CASSIA/agents/merging 2025-12-03T23:47:58,001 copying CASSIA/agents/merging/merging_annotation.py -> build/lib/CASSIA/agents/merging 2025-12-03T23:47:58,004 copying CASSIA/agents/merging/__init__.py -> build/lib/CASSIA/agents/merging 2025-12-03T23:47:58,006 running egg_info 2025-12-03T23:47:58,033 writing CASSIA.egg-info/PKG-INFO 2025-12-03T23:47:58,037 writing dependency_links to CASSIA.egg-info/dependency_links.txt 2025-12-03T23:47:58,039 writing requirements to CASSIA.egg-info/requires.txt 2025-12-03T23:47:58,040 writing top-level names to CASSIA.egg-info/top_level.txt 2025-12-03T23:47:58,085 reading manifest file 'CASSIA.egg-info/SOURCES.txt' 2025-12-03T23:47:58,097 writing manifest file 'CASSIA.egg-info/SOURCES.txt' 2025-12-03T23:47:58,107 copying CASSIA/data/subcluster_results.csv -> build/lib/CASSIA/data 2025-12-03T23:47:58,112 copying CASSIA/data/processed.csv -> build/lib/CASSIA/data 2025-12-03T23:47:58,114 copying CASSIA/data/unprocessed.csv -> build/lib/CASSIA/data 2025-12-03T23:47:58,209 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2025-12-03T23:47:58,209 !! 2025-12-03T23:47:58,211 ******************************************************************************** 2025-12-03T23:47:58,212 Please avoid running ``setup.py`` directly. 2025-12-03T23:47:58,212 Instead, use pypa/build, pypa/installer or other 2025-12-03T23:47:58,212 standards-based tools. 2025-12-03T23:47:58,213 This deprecation is overdue, please update your project and remove deprecated 2025-12-03T23:47:58,214 calls to avoid build errors in the future. 2025-12-03T23:47:58,215 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2025-12-03T23:47:58,215 ******************************************************************************** 2025-12-03T23:47:58,216 !! 2025-12-03T23:47:58,217 self.initialize_options() 2025-12-03T23:47:58,242 installing to build/bdist.linux-armv7l/wheel 2025-12-03T23:47:58,242 running install 2025-12-03T23:47:58,266 running install_lib 2025-12-03T23:47:58,295 creating build/bdist.linux-armv7l/wheel 2025-12-03T23:47:58,297 creating build/bdist.linux-armv7l/wheel/CASSIA 2025-12-03T23:47:58,300 creating build/bdist.linux-armv7l/wheel/CASSIA/comparison 2025-12-03T23:47:58,301 copying build/lib/CASSIA/comparison/symphony_compare.py -> build/bdist.linux-armv7l/wheel/./CASSIA/comparison 2025-12-03T23:47:58,304 copying build/lib/CASSIA/comparison/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/comparison 2025-12-03T23:47:58,307 creating build/bdist.linux-armv7l/wheel/CASSIA/engine 2025-12-03T23:47:58,309 copying build/lib/CASSIA/engine/main_function_code.py -> build/bdist.linux-armv7l/wheel/./CASSIA/engine 2025-12-03T23:47:58,312 copying build/lib/CASSIA/engine/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/engine 2025-12-03T23:47:58,314 copying build/lib/CASSIA/engine/tools_function.py -> build/bdist.linux-armv7l/wheel/./CASSIA/engine 2025-12-03T23:47:58,318 creating build/bdist.linux-armv7l/wheel/CASSIA/agents 2025-12-03T23:47:58,320 creating build/bdist.linux-armv7l/wheel/CASSIA/agents/reference_agent 2025-12-03T23:47:58,321 copying build/lib/CASSIA/agents/reference_agent/reference_agent.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/reference_agent 2025-12-03T23:47:58,324 copying build/lib/CASSIA/agents/reference_agent/reference_selector.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/reference_agent 2025-12-03T23:47:58,327 copying build/lib/CASSIA/agents/reference_agent/complexity_scorer.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/reference_agent 2025-12-03T23:47:58,330 copying build/lib/CASSIA/agents/reference_agent/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/reference_agent 2025-12-03T23:47:58,332 copying build/lib/CASSIA/agents/reference_agent/section_extractor.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/reference_agent 2025-12-03T23:47:58,335 copying build/lib/CASSIA/agents/reference_agent/utils.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/reference_agent 2025-12-03T23:47:58,338 creating build/bdist.linux-armv7l/wheel/CASSIA/agents/uncertainty 2025-12-03T23:47:58,339 copying build/lib/CASSIA/agents/uncertainty/Uncertainty_quantification.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/uncertainty 2025-12-03T23:47:58,343 copying build/lib/CASSIA/agents/uncertainty/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/uncertainty 2025-12-03T23:47:58,345 copying build/lib/CASSIA/agents/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents 2025-12-03T23:47:58,348 creating build/bdist.linux-armv7l/wheel/CASSIA/agents/subclustering 2025-12-03T23:47:58,350 copying build/lib/CASSIA/agents/subclustering/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/subclustering 2025-12-03T23:47:58,352 copying build/lib/CASSIA/agents/subclustering/subclustering.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/subclustering 2025-12-03T23:47:58,356 creating build/bdist.linux-armv7l/wheel/CASSIA/agents/annotation_boost 2025-12-03T23:47:58,357 copying build/lib/CASSIA/agents/annotation_boost/super_annotation_boost.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/annotation_boost 2025-12-03T23:47:58,362 copying build/lib/CASSIA/agents/annotation_boost/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/annotation_boost 2025-12-03T23:47:58,364 copying build/lib/CASSIA/agents/annotation_boost/annotation_boost.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/annotation_boost 2025-12-03T23:47:58,368 creating build/bdist.linux-armv7l/wheel/CASSIA/agents/merging 2025-12-03T23:47:58,370 copying build/lib/CASSIA/agents/merging/merging_annotation.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/merging 2025-12-03T23:47:58,372 copying build/lib/CASSIA/agents/merging/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/agents/merging 2025-12-03T23:47:58,375 copying build/lib/CASSIA/generate_comparison.py -> build/bdist.linux-armv7l/wheel/./CASSIA 2025-12-03T23:47:58,378 copying build/lib/CASSIA/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA 2025-12-03T23:47:58,380 copying build/lib/CASSIA/LLM_evaluation_getscore.py -> build/bdist.linux-armv7l/wheel/./CASSIA 2025-12-03T23:47:58,383 creating build/bdist.linux-armv7l/wheel/CASSIA/evaluation 2025-12-03T23:47:58,384 copying build/lib/CASSIA/evaluation/LLM_evaluation.py -> build/bdist.linux-armv7l/wheel/./CASSIA/evaluation 2025-12-03T23:47:58,388 copying build/lib/CASSIA/evaluation/cell_type_comparison.py -> build/bdist.linux-armv7l/wheel/./CASSIA/evaluation 2025-12-03T23:47:58,392 copying build/lib/CASSIA/evaluation/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/evaluation 2025-12-03T23:47:58,394 copying build/lib/CASSIA/evaluation/scoring.py -> build/bdist.linux-armv7l/wheel/./CASSIA/evaluation 2025-12-03T23:47:58,397 creating build/bdist.linux-armv7l/wheel/CASSIA/imaging 2025-12-03T23:47:58,399 copying build/lib/CASSIA/imaging/llm_image.py -> build/bdist.linux-armv7l/wheel/./CASSIA/imaging 2025-12-03T23:47:58,402 copying build/lib/CASSIA/imaging/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/imaging 2025-12-03T23:47:58,405 creating build/bdist.linux-armv7l/wheel/CASSIA/config 2025-12-03T23:47:58,406 copying build/lib/CASSIA/config/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/config 2025-12-03T23:47:58,409 copying build/lib/CASSIA/config/set_api_keys.py -> build/bdist.linux-armv7l/wheel/./CASSIA/config 2025-12-03T23:47:58,411 copying build/lib/CASSIA/CASSIA_python_tutorial.py -> build/bdist.linux-armv7l/wheel/./CASSIA 2025-12-03T23:47:58,415 creating build/bdist.linux-armv7l/wheel/CASSIA/reports 2025-12-03T23:47:58,417 copying build/lib/CASSIA/reports/generate_report_uncertainty.py -> build/bdist.linux-armv7l/wheel/./CASSIA/reports 2025-12-03T23:47:58,420 copying build/lib/CASSIA/reports/generate_batch_report.py -> build/bdist.linux-armv7l/wheel/./CASSIA/reports 2025-12-03T23:47:58,424 copying build/lib/CASSIA/reports/generate_reports.py -> build/bdist.linux-armv7l/wheel/./CASSIA/reports 2025-12-03T23:47:58,427 copying build/lib/CASSIA/reports/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/reports 2025-12-03T23:47:58,429 copying build/lib/CASSIA/reports/generate_hypothesis_report.py -> build/bdist.linux-armv7l/wheel/./CASSIA/reports 2025-12-03T23:47:58,432 creating build/bdist.linux-armv7l/wheel/CASSIA/core 2025-12-03T23:47:58,434 copying build/lib/CASSIA/core/model_settings.py -> build/bdist.linux-armv7l/wheel/./CASSIA/core 2025-12-03T23:47:58,437 copying build/lib/CASSIA/core/llm_utils.py -> build/bdist.linux-armv7l/wheel/./CASSIA/core 2025-12-03T23:47:58,440 copying build/lib/CASSIA/core/progress_tracker.py -> build/bdist.linux-armv7l/wheel/./CASSIA/core 2025-12-03T23:47:58,442 copying build/lib/CASSIA/core/marker_utils.py -> build/bdist.linux-armv7l/wheel/./CASSIA/core 2025-12-03T23:47:58,445 copying build/lib/CASSIA/core/validation.py -> build/bdist.linux-armv7l/wheel/./CASSIA/core 2025-12-03T23:47:58,448 copying build/lib/CASSIA/core/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/core 2025-12-03T23:47:58,451 copying build/lib/CASSIA/core/exceptions.py -> build/bdist.linux-armv7l/wheel/./CASSIA/core 2025-12-03T23:47:58,453 copying build/lib/CASSIA/core/logging_config.py -> build/bdist.linux-armv7l/wheel/./CASSIA/core 2025-12-03T23:47:58,455 copying build/lib/CASSIA/core/utils.py -> build/bdist.linux-armv7l/wheel/./CASSIA/core 2025-12-03T23:47:58,458 creating build/bdist.linux-armv7l/wheel/CASSIA/pipeline 2025-12-03T23:47:58,459 copying build/lib/CASSIA/pipeline/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/pipeline 2025-12-03T23:47:58,461 copying build/lib/CASSIA/pipeline/pipeline.py -> build/bdist.linux-armv7l/wheel/./CASSIA/pipeline 2025-12-03T23:47:58,464 copying build/lib/CASSIA/run_full_test.py -> build/bdist.linux-armv7l/wheel/./CASSIA 2025-12-03T23:47:58,467 creating build/bdist.linux-armv7l/wheel/CASSIA/hypothesis 2025-12-03T23:47:58,468 copying build/lib/CASSIA/hypothesis/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/hypothesis 2025-12-03T23:47:58,471 copying build/lib/CASSIA/hypothesis/summarize_hypothesis_runs.py -> build/bdist.linux-armv7l/wheel/./CASSIA/hypothesis 2025-12-03T23:47:58,473 copying build/lib/CASSIA/hypothesis/hypothesis_generation.py -> build/bdist.linux-armv7l/wheel/./CASSIA/hypothesis 2025-12-03T23:47:58,477 creating build/bdist.linux-armv7l/wheel/CASSIA/data 2025-12-03T23:47:58,478 copying build/lib/CASSIA/data/subcluster_results.csv -> build/bdist.linux-armv7l/wheel/./CASSIA/data 2025-12-03T23:47:58,482 copying build/lib/CASSIA/data/__init__.py -> build/bdist.linux-armv7l/wheel/./CASSIA/data 2025-12-03T23:47:58,484 copying build/lib/CASSIA/data/processed.csv -> build/bdist.linux-armv7l/wheel/./CASSIA/data 2025-12-03T23:47:58,486 copying build/lib/CASSIA/data/unprocessed.csv -> build/bdist.linux-armv7l/wheel/./CASSIA/data 2025-12-03T23:47:58,541 copying build/lib/CASSIA/LLM_evaluation_test.py -> build/bdist.linux-armv7l/wheel/./CASSIA 2025-12-03T23:47:58,543 running install_egg_info 2025-12-03T23:47:58,577 Copying CASSIA.egg-info to build/bdist.linux-armv7l/wheel/./CASSIA-0.3.7-py3.11.egg-info 2025-12-03T23:47:58,588 running install_scripts 2025-12-03T23:47:58,599 creating build/bdist.linux-armv7l/wheel/cassia-0.3.7.dist-info/WHEEL 2025-12-03T23:47:58,602 creating '/tmp/pip-wheel-g6o7gt9v/cassia-0.3.7-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-12-03T23:47:58,614 adding 'CASSIA/CASSIA_python_tutorial.py' 2025-12-03T23:47:58,616 adding 'CASSIA/LLM_evaluation_getscore.py' 2025-12-03T23:47:58,619 adding 'CASSIA/LLM_evaluation_test.py' 2025-12-03T23:47:58,621 adding 'CASSIA/__init__.py' 2025-12-03T23:47:58,623 adding 'CASSIA/generate_comparison.py' 2025-12-03T23:47:58,625 adding 'CASSIA/run_full_test.py' 2025-12-03T23:47:58,627 adding 'CASSIA/agents/__init__.py' 2025-12-03T23:47:58,629 adding 'CASSIA/agents/annotation_boost/__init__.py' 2025-12-03T23:47:58,639 adding 'CASSIA/agents/annotation_boost/annotation_boost.py' 2025-12-03T23:47:58,652 adding 'CASSIA/agents/annotation_boost/super_annotation_boost.py' 2025-12-03T23:47:58,655 adding 'CASSIA/agents/merging/__init__.py' 2025-12-03T23:47:58,657 adding 'CASSIA/agents/merging/merging_annotation.py' 2025-12-03T23:47:58,659 adding 'CASSIA/agents/reference_agent/__init__.py' 2025-12-03T23:47:58,662 adding 'CASSIA/agents/reference_agent/complexity_scorer.py' 2025-12-03T23:47:58,664 adding 'CASSIA/agents/reference_agent/reference_agent.py' 2025-12-03T23:47:58,666 adding 'CASSIA/agents/reference_agent/reference_selector.py' 2025-12-03T23:47:58,668 adding 'CASSIA/agents/reference_agent/section_extractor.py' 2025-12-03T23:47:58,669 adding 'CASSIA/agents/reference_agent/utils.py' 2025-12-03T23:47:58,671 adding 'CASSIA/agents/subclustering/__init__.py' 2025-12-03T23:47:58,674 adding 'CASSIA/agents/subclustering/subclustering.py' 2025-12-03T23:47:58,682 adding 'CASSIA/agents/uncertainty/Uncertainty_quantification.py' 2025-12-03T23:47:58,683 adding 'CASSIA/agents/uncertainty/__init__.py' 2025-12-03T23:47:58,685 adding 'CASSIA/comparison/__init__.py' 2025-12-03T23:47:58,687 adding 'CASSIA/comparison/symphony_compare.py' 2025-12-03T23:47:58,689 adding 'CASSIA/config/__init__.py' 2025-12-03T23:47:58,690 adding 'CASSIA/config/set_api_keys.py' 2025-12-03T23:47:58,692 adding 'CASSIA/core/__init__.py' 2025-12-03T23:47:58,693 adding 'CASSIA/core/exceptions.py' 2025-12-03T23:47:58,695 adding 'CASSIA/core/llm_utils.py' 2025-12-03T23:47:58,696 adding 'CASSIA/core/logging_config.py' 2025-12-03T23:47:58,698 adding 'CASSIA/core/marker_utils.py' 2025-12-03T23:47:58,701 adding 'CASSIA/core/model_settings.py' 2025-12-03T23:47:58,702 adding 'CASSIA/core/progress_tracker.py' 2025-12-03T23:47:58,704 adding 'CASSIA/core/utils.py' 2025-12-03T23:47:58,707 adding 'CASSIA/core/validation.py' 2025-12-03T23:47:58,709 adding 'CASSIA/data/__init__.py' 2025-12-03T23:47:58,710 adding 'CASSIA/data/processed.csv' 2025-12-03T23:47:58,740 adding 'CASSIA/data/subcluster_results.csv' 2025-12-03T23:47:59,435 adding 'CASSIA/data/unprocessed.csv' 2025-12-03T23:47:59,459 adding 'CASSIA/engine/__init__.py' 2025-12-03T23:47:59,462 adding 'CASSIA/engine/main_function_code.py' 2025-12-03T23:47:59,466 adding 'CASSIA/engine/tools_function.py' 2025-12-03T23:47:59,472 adding 'CASSIA/evaluation/LLM_evaluation.py' 2025-12-03T23:47:59,474 adding 'CASSIA/evaluation/__init__.py' 2025-12-03T23:47:59,478 adding 'CASSIA/evaluation/cell_type_comparison.py' 2025-12-03T23:47:59,481 adding 'CASSIA/evaluation/scoring.py' 2025-12-03T23:47:59,483 adding 'CASSIA/hypothesis/__init__.py' 2025-12-03T23:47:59,485 adding 'CASSIA/hypothesis/hypothesis_generation.py' 2025-12-03T23:47:59,487 adding 'CASSIA/hypothesis/summarize_hypothesis_runs.py' 2025-12-03T23:47:59,489 adding 'CASSIA/imaging/__init__.py' 2025-12-03T23:47:59,491 adding 'CASSIA/imaging/llm_image.py' 2025-12-03T23:47:59,493 adding 'CASSIA/pipeline/__init__.py' 2025-12-03T23:47:59,495 adding 'CASSIA/pipeline/pipeline.py' 2025-12-03T23:47:59,497 adding 'CASSIA/reports/__init__.py' 2025-12-03T23:47:59,502 adding 'CASSIA/reports/generate_batch_report.py' 2025-12-03T23:47:59,504 adding 'CASSIA/reports/generate_hypothesis_report.py' 2025-12-03T23:47:59,508 adding 'CASSIA/reports/generate_report_uncertainty.py' 2025-12-03T23:47:59,513 adding 'CASSIA/reports/generate_reports.py' 2025-12-03T23:47:59,515 adding 'cassia-0.3.7.dist-info/METADATA' 2025-12-03T23:47:59,516 adding 'cassia-0.3.7.dist-info/WHEEL' 2025-12-03T23:47:59,517 adding 'cassia-0.3.7.dist-info/top_level.txt' 2025-12-03T23:47:59,518 adding 'cassia-0.3.7.dist-info/RECORD' 2025-12-03T23:47:59,535 removing build/bdist.linux-armv7l/wheel 2025-12-03T23:47:59,672 Building wheel for cassia (setup.py): finished with status 'done' 2025-12-03T23:47:59,690 Created wheel for cassia: filename=cassia-0.3.7-py3-none-any.whl size=1540656 sha256=c6884fc1d79ba4cf8b13b2c3c8dc1393a424254f2a8535c4909f80d947ac608e 2025-12-03T23:47:59,691 Stored in directory: /tmp/pip-ephem-wheel-cache-il_hdwa7/wheels/de/dc/ee/f21fae754779f5d0d24023096b6848e8f76d174d77666f5394 2025-12-03T23:47:59,704 Successfully built cassia 2025-12-03T23:47:59,757 Removed build tracker: '/tmp/pip-build-tracker-1ehc5qjx'