2025-12-04T16:20:57,924 Created temporary directory: /tmp/pip-ephem-wheel-cache-jabd8cc8 2025-12-04T16:20:57,926 Created temporary directory: /tmp/pip-build-tracker-rdgubhlq 2025-12-04T16:20:57,927 Initialized build tracking at /tmp/pip-build-tracker-rdgubhlq 2025-12-04T16:20:57,927 Created build tracker: /tmp/pip-build-tracker-rdgubhlq 2025-12-04T16:20:57,927 Entered build tracker: /tmp/pip-build-tracker-rdgubhlq 2025-12-04T16:20:57,928 Created temporary directory: /tmp/pip-wheel-3eu6_bmj 2025-12-04T16:20:57,931 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2025-12-04T16:20:57,934 Created temporary directory: /tmp/pip-ephem-wheel-cache-8zn58bsl 2025-12-04T16:20:57,955 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-12-04T16:20:57,959 2 location(s) to search for versions of cryocat: 2025-12-04T16:20:57,959 * https://pypi.org/simple/cryocat/ 2025-12-04T16:20:57,959 * https://www.piwheels.org/simple/cryocat/ 2025-12-04T16:20:57,960 Fetching project page and analyzing links: https://pypi.org/simple/cryocat/ 2025-12-04T16:20:57,960 Getting page https://pypi.org/simple/cryocat/ 2025-12-04T16:20:57,962 Found index url https://pypi.org/simple 2025-12-04T16:20:58,178 Fetched page https://pypi.org/simple/cryocat/ as application/vnd.pypi.simple.v1+json 2025-12-04T16:20:58,181 Skipping link: No binaries permitted for cryocat: https://files.pythonhosted.org/packages/cd/9b/7b27da172339b20d6f83f6bc77aa103133f2b1e968c7a3f81c7968b5edf2/cryoCAT-0.2.0-py3-none-any.whl (from https://pypi.org/simple/cryocat/) (requires-python:>=3.9) 2025-12-04T16:20:58,182 Found link https://files.pythonhosted.org/packages/0c/c9/1725d32343c362ed7f9f5293a0de6d6391e8bd79c0ae50bd576b7aeb4fea/cryoCAT-0.2.0.tar.gz (from https://pypi.org/simple/cryocat/) (requires-python:>=3.9), version: 0.2.0 2025-12-04T16:20:58,182 Skipping link: No binaries permitted for cryocat: https://files.pythonhosted.org/packages/c3/ff/6abfae51b4e9a3f87477d0812acaa1103691774d19e98696491fc9713b56/cryocat-0.5.0-py3-none-any.whl (from https://pypi.org/simple/cryocat/) (requires-python:>=3.9) 2025-12-04T16:20:58,183 Found link https://files.pythonhosted.org/packages/87/e5/26110da210f2d94007dd8d767cee0d180443c4b6c4d11dd73dbdfc207ef7/cryocat-0.5.0.tar.gz (from https://pypi.org/simple/cryocat/) (requires-python:>=3.9), version: 0.5.0 2025-12-04T16:20:58,184 Skipping link: No binaries permitted for cryocat: https://files.pythonhosted.org/packages/1a/42/fa56100a63ac1837ed7c77ec23866c2a9e89370d5e6f60ee8b9940737e5a/cryocat-0.6.1-py3-none-any.whl (from https://pypi.org/simple/cryocat/) (requires-python:>=3.9) 2025-12-04T16:20:58,185 Found link https://files.pythonhosted.org/packages/fe/4e/d73f12de7231dbe94419cc1cea5205e2df7f923bb23a65079ebb4a551294/cryocat-0.6.1.tar.gz (from https://pypi.org/simple/cryocat/) (requires-python:>=3.9), version: 0.6.1 2025-12-04T16:20:58,186 Skipping link: No binaries permitted for cryocat: https://files.pythonhosted.org/packages/e3/fb/1e2b3d77b401cb585400a0917baf66c96775df70be460628dd4ae7b7e062/cryocat-0.7.1-py3-none-any.whl (from https://pypi.org/simple/cryocat/) (requires-python:>=3.9) 2025-12-04T16:20:58,187 Found link https://files.pythonhosted.org/packages/08/ff/295e957f4c98b723dc82add241d1b3d287b397f475ba0eea23c7c6e990f8/cryocat-0.7.1.tar.gz (from https://pypi.org/simple/cryocat/) (requires-python:>=3.9), version: 0.7.1 2025-12-04T16:20:58,188 Fetching project page and analyzing links: https://www.piwheels.org/simple/cryocat/ 2025-12-04T16:20:58,189 Getting page https://www.piwheels.org/simple/cryocat/ 2025-12-04T16:20:58,190 Found index url https://www.piwheels.org/simple 2025-12-04T16:20:58,355 Fetched page https://www.piwheels.org/simple/cryocat/ as text/html 2025-12-04T16:20:58,357 Skipping link: No binaries permitted for cryocat: https://archive1.piwheels.org/simple/cryocat/cryocat-0.6.1-py3-none-any.whl#sha256=f242f551edf910ef5aab1fb64a21355b7eb9c3b35ba7747ee20ccb0b12aedac9 (from https://www.piwheels.org/simple/cryocat/) (requires-python:>=3.9) 2025-12-04T16:20:58,358 Skipping link: No binaries permitted for cryocat: https://archive1.piwheels.org/simple/cryocat/cryocat-0.5.0-py3-none-any.whl#sha256=eb07acbec137f8ef558c13b0e1824df4a767597aa65b513c6d59ef7975d6e46a (from https://www.piwheels.org/simple/cryocat/) (requires-python:>=3.9) 2025-12-04T16:20:58,358 Skipping link: No binaries permitted for cryocat: https://archive1.piwheels.org/simple/cryocat/cryoCAT-0.2.0-py3-none-any.whl#sha256=864673d7e2822c64d0e5ca4dd1bf17ecfbcdd1a29a8b48e1466b7d19af3bca42 (from https://www.piwheels.org/simple/cryocat/) (requires-python:>=3.9) 2025-12-04T16:20:58,359 Skipping link: not a file: https://www.piwheels.org/simple/cryocat/ 2025-12-04T16:20:58,359 Skipping link: not a file: https://pypi.org/simple/cryocat/ 2025-12-04T16:20:58,379 Given no hashes to check 1 links for project 'cryocat': discarding no candidates 2025-12-04T16:20:58,399 Collecting cryocat==0.7.1 2025-12-04T16:20:58,401 Created temporary directory: /tmp/pip-unpack-9y36dh76 2025-12-04T16:20:58,621 Downloading cryocat-0.7.1.tar.gz (400 kB) 2025-12-04T16:20:58,903 Added cryocat==0.7.1 from https://files.pythonhosted.org/packages/08/ff/295e957f4c98b723dc82add241d1b3d287b397f475ba0eea23c7c6e990f8/cryocat-0.7.1.tar.gz to build tracker '/tmp/pip-build-tracker-rdgubhlq' 2025-12-04T16:20:58,908 Created temporary directory: /tmp/pip-build-env-zqezbc07 2025-12-04T16:20:58,912 Installing build dependencies: started 2025-12-04T16:20:58,913 Running command pip subprocess to install build dependencies 2025-12-04T16:21:00,086 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2025-12-04T16:21:00,733 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2025-12-04T16:21:00,756 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-12-04T16:21:02,482 Collecting setuptools>=61.0 2025-12-04T16:21:02,586 Using cached https://www.piwheels.org/simple/setuptools/setuptools-80.9.0-py3-none-any.whl (1.2 MB) 2025-12-04T16:21:05,508 Installing collected packages: setuptools 2025-12-04T16:21:09,074 Successfully installed setuptools-80.9.0 2025-12-04T16:21:09,341 Installing build dependencies: finished with status 'done' 2025-12-04T16:21:09,348 Getting requirements to build wheel: started 2025-12-04T16:21:09,349 Running command Getting requirements to build wheel 2025-12-04T16:21:09,952 /tmp/pip-build-env-zqezbc07/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2025-12-04T16:21:09,952 !! 2025-12-04T16:21:09,953 ******************************************************************************** 2025-12-04T16:21:09,954 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2025-12-04T16:21:09,955 By 2026-Feb-18, you need to update your project and remove deprecated calls 2025-12-04T16:21:09,956 or your builds will no longer be supported. 2025-12-04T16:21:09,957 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-12-04T16:21:09,957 ******************************************************************************** 2025-12-04T16:21:09,959 !! 2025-12-04T16:21:09,959 corresp(dist, value, root_dir) 2025-12-04T16:21:10,045 /tmp/pip-build-env-zqezbc07/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-12-04T16:21:10,046 !! 2025-12-04T16:21:10,047 ******************************************************************************** 2025-12-04T16:21:10,047 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-12-04T16:21:10,048 License :: OSI Approved :: GNU General Public License v3 or later (GPLv3+) 2025-12-04T16:21:10,049 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-12-04T16:21:10,050 ******************************************************************************** 2025-12-04T16:21:10,050 !! 2025-12-04T16:21:10,051 dist._finalize_license_expression() 2025-12-04T16:21:10,051 /tmp/pip-build-env-zqezbc07/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-12-04T16:21:10,052 !! 2025-12-04T16:21:10,053 ******************************************************************************** 2025-12-04T16:21:10,054 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-12-04T16:21:10,054 License :: OSI Approved :: GNU General Public License v3 or later (GPLv3+) 2025-12-04T16:21:10,056 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-12-04T16:21:10,056 ******************************************************************************** 2025-12-04T16:21:10,057 !! 2025-12-04T16:21:10,058 self._finalize_license_expression() 2025-12-04T16:21:10,059 running egg_info 2025-12-04T16:21:10,066 writing cryoCAT.egg-info/PKG-INFO 2025-12-04T16:21:10,069 writing dependency_links to cryoCAT.egg-info/dependency_links.txt 2025-12-04T16:21:10,071 writing entry points to cryoCAT.egg-info/entry_points.txt 2025-12-04T16:21:10,073 writing requirements to cryoCAT.egg-info/requires.txt 2025-12-04T16:21:10,074 writing top-level names to cryoCAT.egg-info/top_level.txt 2025-12-04T16:21:10,099 reading manifest file 'cryoCAT.egg-info/SOURCES.txt' 2025-12-04T16:21:10,104 adding license file 'LICENSE' 2025-12-04T16:21:10,108 writing manifest file 'cryoCAT.egg-info/SOURCES.txt' 2025-12-04T16:21:10,206 Getting requirements to build wheel: finished with status 'done' 2025-12-04T16:21:10,210 Created temporary directory: /tmp/pip-modern-metadata-95ucilq4 2025-12-04T16:21:10,212 Preparing metadata (pyproject.toml): started 2025-12-04T16:21:10,213 Running command Preparing metadata (pyproject.toml) 2025-12-04T16:21:10,773 /tmp/pip-build-env-zqezbc07/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2025-12-04T16:21:10,774 !! 2025-12-04T16:21:10,775 ******************************************************************************** 2025-12-04T16:21:10,775 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2025-12-04T16:21:10,777 By 2026-Feb-18, you need to update your project and remove deprecated calls 2025-12-04T16:21:10,777 or your builds will no longer be supported. 2025-12-04T16:21:10,778 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-12-04T16:21:10,779 ******************************************************************************** 2025-12-04T16:21:10,780 !! 2025-12-04T16:21:10,781 corresp(dist, value, root_dir) 2025-12-04T16:21:10,862 /tmp/pip-build-env-zqezbc07/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-12-04T16:21:10,862 !! 2025-12-04T16:21:10,864 ******************************************************************************** 2025-12-04T16:21:10,864 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-12-04T16:21:10,865 License :: OSI Approved :: GNU General Public License v3 or later (GPLv3+) 2025-12-04T16:21:10,866 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-12-04T16:21:10,867 ******************************************************************************** 2025-12-04T16:21:10,868 !! 2025-12-04T16:21:10,868 dist._finalize_license_expression() 2025-12-04T16:21:10,869 /tmp/pip-build-env-zqezbc07/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-12-04T16:21:10,869 !! 2025-12-04T16:21:10,870 ******************************************************************************** 2025-12-04T16:21:10,870 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-12-04T16:21:10,871 License :: OSI Approved :: GNU General Public License v3 or later (GPLv3+) 2025-12-04T16:21:10,872 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-12-04T16:21:10,873 ******************************************************************************** 2025-12-04T16:21:10,874 !! 2025-12-04T16:21:10,874 self._finalize_license_expression() 2025-12-04T16:21:10,876 running dist_info 2025-12-04T16:21:10,889 creating /tmp/pip-modern-metadata-95ucilq4/cryoCAT.egg-info 2025-12-04T16:21:10,890 writing /tmp/pip-modern-metadata-95ucilq4/cryoCAT.egg-info/PKG-INFO 2025-12-04T16:21:10,893 writing dependency_links to /tmp/pip-modern-metadata-95ucilq4/cryoCAT.egg-info/dependency_links.txt 2025-12-04T16:21:10,895 writing entry points to /tmp/pip-modern-metadata-95ucilq4/cryoCAT.egg-info/entry_points.txt 2025-12-04T16:21:10,897 writing requirements to /tmp/pip-modern-metadata-95ucilq4/cryoCAT.egg-info/requires.txt 2025-12-04T16:21:10,898 writing top-level names to /tmp/pip-modern-metadata-95ucilq4/cryoCAT.egg-info/top_level.txt 2025-12-04T16:21:10,900 writing manifest file '/tmp/pip-modern-metadata-95ucilq4/cryoCAT.egg-info/SOURCES.txt' 2025-12-04T16:21:10,921 reading manifest file '/tmp/pip-modern-metadata-95ucilq4/cryoCAT.egg-info/SOURCES.txt' 2025-12-04T16:21:10,924 adding license file 'LICENSE' 2025-12-04T16:21:10,928 writing manifest file '/tmp/pip-modern-metadata-95ucilq4/cryoCAT.egg-info/SOURCES.txt' 2025-12-04T16:21:10,929 creating '/tmp/pip-modern-metadata-95ucilq4/cryocat-0.7.1.dist-info' 2025-12-04T16:21:11,057 Preparing metadata (pyproject.toml): finished with status 'done' 2025-12-04T16:21:11,062 Source in /tmp/pip-wheel-3eu6_bmj/cryocat_cc3898871cde4613aaf3b0b304076191 has version 0.7.1, which satisfies requirement cryocat==0.7.1 from https://files.pythonhosted.org/packages/08/ff/295e957f4c98b723dc82add241d1b3d287b397f475ba0eea23c7c6e990f8/cryocat-0.7.1.tar.gz 2025-12-04T16:21:11,064 Removed cryocat==0.7.1 from https://files.pythonhosted.org/packages/08/ff/295e957f4c98b723dc82add241d1b3d287b397f475ba0eea23c7c6e990f8/cryocat-0.7.1.tar.gz from build tracker '/tmp/pip-build-tracker-rdgubhlq' 2025-12-04T16:21:11,069 Created temporary directory: /tmp/pip-unpack-n_abssbh 2025-12-04T16:21:11,070 Building wheels for collected packages: cryocat 2025-12-04T16:21:11,074 Created temporary directory: /tmp/pip-wheel-i3_a9d1f 2025-12-04T16:21:11,075 Destination directory: /tmp/pip-wheel-i3_a9d1f 2025-12-04T16:21:11,077 Building wheel for cryocat (pyproject.toml): started 2025-12-04T16:21:11,078 Running command Building wheel for cryocat (pyproject.toml) 2025-12-04T16:21:11,621 /tmp/pip-build-env-zqezbc07/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2025-12-04T16:21:11,622 !! 2025-12-04T16:21:11,623 ******************************************************************************** 2025-12-04T16:21:11,623 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2025-12-04T16:21:11,624 By 2026-Feb-18, you need to update your project and remove deprecated calls 2025-12-04T16:21:11,625 or your builds will no longer be supported. 2025-12-04T16:21:11,626 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-12-04T16:21:11,626 ******************************************************************************** 2025-12-04T16:21:11,627 !! 2025-12-04T16:21:11,628 corresp(dist, value, root_dir) 2025-12-04T16:21:11,702 /tmp/pip-build-env-zqezbc07/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-12-04T16:21:11,703 !! 2025-12-04T16:21:11,704 ******************************************************************************** 2025-12-04T16:21:11,704 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-12-04T16:21:11,705 License :: OSI Approved :: GNU General Public License v3 or later (GPLv3+) 2025-12-04T16:21:11,706 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-12-04T16:21:11,707 ******************************************************************************** 2025-12-04T16:21:11,708 !! 2025-12-04T16:21:11,709 dist._finalize_license_expression() 2025-12-04T16:21:11,709 /tmp/pip-build-env-zqezbc07/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-12-04T16:21:11,710 !! 2025-12-04T16:21:11,711 ******************************************************************************** 2025-12-04T16:21:11,712 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-12-04T16:21:11,713 License :: OSI Approved :: GNU General Public License v3 or later (GPLv3+) 2025-12-04T16:21:11,715 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-12-04T16:21:11,715 ******************************************************************************** 2025-12-04T16:21:11,716 !! 2025-12-04T16:21:11,717 self._finalize_license_expression() 2025-12-04T16:21:11,718 running bdist_wheel 2025-12-04T16:21:11,733 running build 2025-12-04T16:21:11,734 running build_py 2025-12-04T16:21:11,741 creating build/lib/cryocat 2025-12-04T16:21:11,743 copying cryocat/tiltstack.py -> build/lib/cryocat 2025-12-04T16:21:11,747 copying cryocat/cli.py -> build/lib/cryocat 2025-12-04T16:21:11,749 copying cryocat/cryomap.py -> build/lib/cryocat 2025-12-04T16:21:11,753 copying cryocat/scriptutils.py -> build/lib/cryocat 2025-12-04T16:21:11,755 copying cryocat/structure.py -> build/lib/cryocat 2025-12-04T16:21:11,758 copying cryocat/mathutils.py -> build/lib/cryocat 2025-12-04T16:21:11,761 copying cryocat/wedgeutils.py -> build/lib/cryocat 2025-12-04T16:21:11,764 copying cryocat/tango.py -> build/lib/cryocat 2025-12-04T16:21:11,769 copying cryocat/visplot.py -> build/lib/cryocat 2025-12-04T16:21:11,773 copying cryocat/ribana.py -> build/lib/cryocat 2025-12-04T16:21:11,776 copying cryocat/classutils.py -> build/lib/cryocat 2025-12-04T16:21:11,778 copying cryocat/pana.py -> build/lib/cryocat 2025-12-04T16:21:11,783 copying cryocat/imod.py -> build/lib/cryocat 2025-12-04T16:21:11,786 copying cryocat/tmana.py -> build/lib/cryocat 2025-12-04T16:21:11,789 copying cryocat/exceptions.py -> build/lib/cryocat 2025-12-04T16:21:11,791 copying cryocat/memthick.py -> build/lib/cryocat 2025-12-04T16:21:11,797 copying cryocat/starfileio.py -> build/lib/cryocat 2025-12-04T16:21:11,800 copying cryocat/sta.py -> build/lib/cryocat 2025-12-04T16:21:11,803 copying cryocat/tgeometry.py -> build/lib/cryocat 2025-12-04T16:21:11,805 copying cryocat/nnana.py -> build/lib/cryocat 2025-12-04T16:21:11,808 copying cryocat/cryomask.py -> build/lib/cryocat 2025-12-04T16:21:11,812 copying cryocat/surfsamp.py -> build/lib/cryocat 2025-12-04T16:21:11,815 copying cryocat/cryomotl.py -> build/lib/cryocat 2025-12-04T16:21:11,822 copying cryocat/__init__.py -> build/lib/cryocat 2025-12-04T16:21:11,824 copying cryocat/mdoc.py -> build/lib/cryocat 2025-12-04T16:21:11,827 copying cryocat/quadric.py -> build/lib/cryocat 2025-12-04T16:21:11,830 copying cryocat/geom.py -> build/lib/cryocat 2025-12-04T16:21:11,834 copying cryocat/ioutils.py -> build/lib/cryocat 2025-12-04T16:21:11,838 copying cryocat/fsc.py -> build/lib/cryocat 2025-12-04T16:21:11,841 running egg_info 2025-12-04T16:21:11,853 writing cryoCAT.egg-info/PKG-INFO 2025-12-04T16:21:11,856 writing dependency_links to cryoCAT.egg-info/dependency_links.txt 2025-12-04T16:21:11,858 writing entry points to cryoCAT.egg-info/entry_points.txt 2025-12-04T16:21:11,860 writing requirements to cryoCAT.egg-info/requires.txt 2025-12-04T16:21:11,861 writing top-level names to cryoCAT.egg-info/top_level.txt 2025-12-04T16:21:11,873 reading manifest file 'cryoCAT.egg-info/SOURCES.txt' 2025-12-04T16:21:11,878 adding license file 'LICENSE' 2025-12-04T16:21:11,882 writing manifest file 'cryoCAT.egg-info/SOURCES.txt' 2025-12-04T16:21:11,897 installing to build/bdist.linux-armv7l/wheel 2025-12-04T16:21:11,897 running install 2025-12-04T16:21:11,922 running install_lib 2025-12-04T16:21:11,930 creating build/bdist.linux-armv7l/wheel 2025-12-04T16:21:11,932 creating build/bdist.linux-armv7l/wheel/cryocat 2025-12-04T16:21:11,934 copying build/lib/cryocat/tiltstack.py -> build/bdist.linux-armv7l/wheel/./cryocat 2025-12-04T16:21:11,937 copying build/lib/cryocat/cli.py -> build/bdist.linux-armv7l/wheel/./cryocat 2025-12-04T16:21:11,940 copying build/lib/cryocat/cryomap.py -> build/bdist.linux-armv7l/wheel/./cryocat 2025-12-04T16:21:11,943 copying build/lib/cryocat/scriptutils.py -> build/bdist.linux-armv7l/wheel/./cryocat 2025-12-04T16:21:11,946 copying build/lib/cryocat/structure.py -> build/bdist.linux-armv7l/wheel/./cryocat 2025-12-04T16:21:11,950 copying build/lib/cryocat/mathutils.py -> build/bdist.linux-armv7l/wheel/./cryocat 2025-12-04T16:21:11,952 copying build/lib/cryocat/wedgeutils.py -> build/bdist.linux-armv7l/wheel/./cryocat 2025-12-04T16:21:11,955 copying build/lib/cryocat/tango.py -> build/bdist.linux-armv7l/wheel/./cryocat 2025-12-04T16:21:11,961 copying build/lib/cryocat/visplot.py -> build/bdist.linux-armv7l/wheel/./cryocat 2025-12-04T16:21:11,965 copying build/lib/cryocat/ribana.py -> build/bdist.linux-armv7l/wheel/./cryocat 2025-12-04T16:21:11,968 copying build/lib/cryocat/classutils.py -> build/bdist.linux-armv7l/wheel/./cryocat 2025-12-04T16:21:11,971 copying build/lib/cryocat/pana.py -> build/bdist.linux-armv7l/wheel/./cryocat 2025-12-04T16:21:11,975 copying build/lib/cryocat/imod.py -> build/bdist.linux-armv7l/wheel/./cryocat 2025-12-04T16:21:11,978 copying build/lib/cryocat/tmana.py -> build/bdist.linux-armv7l/wheel/./cryocat 2025-12-04T16:21:11,981 copying build/lib/cryocat/exceptions.py -> build/bdist.linux-armv7l/wheel/./cryocat 2025-12-04T16:21:11,983 copying build/lib/cryocat/memthick.py -> build/bdist.linux-armv7l/wheel/./cryocat 2025-12-04T16:21:11,989 copying build/lib/cryocat/starfileio.py -> build/bdist.linux-armv7l/wheel/./cryocat 2025-12-04T16:21:11,992 copying build/lib/cryocat/sta.py -> build/bdist.linux-armv7l/wheel/./cryocat 2025-12-04T16:21:11,995 copying build/lib/cryocat/tgeometry.py -> build/bdist.linux-armv7l/wheel/./cryocat 2025-12-04T16:21:11,998 copying build/lib/cryocat/nnana.py -> build/bdist.linux-armv7l/wheel/./cryocat 2025-12-04T16:21:12,001 copying build/lib/cryocat/cryomask.py -> build/bdist.linux-armv7l/wheel/./cryocat 2025-12-04T16:21:12,005 copying build/lib/cryocat/surfsamp.py -> build/bdist.linux-armv7l/wheel/./cryocat 2025-12-04T16:21:12,008 copying build/lib/cryocat/cryomotl.py -> build/bdist.linux-armv7l/wheel/./cryocat 2025-12-04T16:21:12,015 copying build/lib/cryocat/__init__.py -> build/bdist.linux-armv7l/wheel/./cryocat 2025-12-04T16:21:12,017 copying build/lib/cryocat/mdoc.py -> build/bdist.linux-armv7l/wheel/./cryocat 2025-12-04T16:21:12,020 copying build/lib/cryocat/quadric.py -> build/bdist.linux-armv7l/wheel/./cryocat 2025-12-04T16:21:12,023 copying build/lib/cryocat/geom.py -> build/bdist.linux-armv7l/wheel/./cryocat 2025-12-04T16:21:12,027 copying build/lib/cryocat/ioutils.py -> build/bdist.linux-armv7l/wheel/./cryocat 2025-12-04T16:21:12,031 copying build/lib/cryocat/fsc.py -> build/bdist.linux-armv7l/wheel/./cryocat 2025-12-04T16:21:12,034 running install_egg_info 2025-12-04T16:21:12,040 Copying cryoCAT.egg-info to build/bdist.linux-armv7l/wheel/./cryoCAT-0.7.1-py3.11.egg-info 2025-12-04T16:21:12,052 running install_scripts 2025-12-04T16:21:12,066 creating build/bdist.linux-armv7l/wheel/cryocat-0.7.1.dist-info/WHEEL 2025-12-04T16:21:12,069 creating '/tmp/pip-wheel-i3_a9d1f/.tmp-goaofdph/cryocat-0.7.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-12-04T16:21:12,072 adding 'cryocat/__init__.py' 2025-12-04T16:21:12,074 adding 'cryocat/classutils.py' 2025-12-04T16:21:12,077 adding 'cryocat/cli.py' 2025-12-04T16:21:12,085 adding 'cryocat/cryomap.py' 2025-12-04T16:21:12,090 adding 'cryocat/cryomask.py' 2025-12-04T16:21:12,111 adding 'cryocat/cryomotl.py' 2025-12-04T16:21:12,114 adding 'cryocat/exceptions.py' 2025-12-04T16:21:12,117 adding 'cryocat/fsc.py' 2025-12-04T16:21:12,129 adding 'cryocat/geom.py' 2025-12-04T16:21:12,132 adding 'cryocat/imod.py' 2025-12-04T16:21:12,139 adding 'cryocat/ioutils.py' 2025-12-04T16:21:12,141 adding 'cryocat/mathutils.py' 2025-12-04T16:21:12,144 adding 'cryocat/mdoc.py' 2025-12-04T16:21:12,167 adding 'cryocat/memthick.py' 2025-12-04T16:21:12,174 adding 'cryocat/nnana.py' 2025-12-04T16:21:12,186 adding 'cryocat/pana.py' 2025-12-04T16:21:12,190 adding 'cryocat/quadric.py' 2025-12-04T16:21:12,194 adding 'cryocat/ribana.py' 2025-12-04T16:21:12,197 adding 'cryocat/scriptutils.py' 2025-12-04T16:21:12,201 adding 'cryocat/sta.py' 2025-12-04T16:21:12,204 adding 'cryocat/starfileio.py' 2025-12-04T16:21:12,208 adding 'cryocat/structure.py' 2025-12-04T16:21:12,213 adding 'cryocat/surfsamp.py' 2025-12-04T16:21:12,226 adding 'cryocat/tango.py' 2025-12-04T16:21:12,229 adding 'cryocat/tgeometry.py' 2025-12-04T16:21:12,233 adding 'cryocat/tiltstack.py' 2025-12-04T16:21:12,239 adding 'cryocat/tmana.py' 2025-12-04T16:21:12,248 adding 'cryocat/visplot.py' 2025-12-04T16:21:12,251 adding 'cryocat/wedgeutils.py' 2025-12-04T16:21:12,259 adding 'cryocat-0.7.1.dist-info/licenses/LICENSE' 2025-12-04T16:21:12,261 adding 'cryocat-0.7.1.dist-info/METADATA' 2025-12-04T16:21:12,263 adding 'cryocat-0.7.1.dist-info/WHEEL' 2025-12-04T16:21:12,264 adding 'cryocat-0.7.1.dist-info/entry_points.txt' 2025-12-04T16:21:12,265 adding 'cryocat-0.7.1.dist-info/top_level.txt' 2025-12-04T16:21:12,267 adding 'cryocat-0.7.1.dist-info/RECORD' 2025-12-04T16:21:12,273 removing build/bdist.linux-armv7l/wheel 2025-12-04T16:21:12,380 Building wheel for cryocat (pyproject.toml): finished with status 'done' 2025-12-04T16:21:12,393 Created wheel for cryocat: filename=cryocat-0.7.1-py3-none-any.whl size=318154 sha256=39874b68a7316cb5d3445970d0982f85d046109f6ea072dce126a62d1a7919bc 2025-12-04T16:21:12,395 Stored in directory: /tmp/pip-ephem-wheel-cache-8zn58bsl/wheels/f4/87/74/812eeb70424131c5f6f1665cba4f419b719cc2c2757c0500e2 2025-12-04T16:21:12,407 Successfully built cryocat 2025-12-04T16:21:12,421 Removed build tracker: '/tmp/pip-build-tracker-rdgubhlq'