2025-12-05T15:11:54,041 Created temporary directory: /tmp/pip-ephem-wheel-cache-sviwtlmr 2025-12-05T15:11:54,043 Created temporary directory: /tmp/pip-build-tracker-4doy5kl1 2025-12-05T15:11:54,044 Initialized build tracking at /tmp/pip-build-tracker-4doy5kl1 2025-12-05T15:11:54,045 Created build tracker: /tmp/pip-build-tracker-4doy5kl1 2025-12-05T15:11:54,046 Entered build tracker: /tmp/pip-build-tracker-4doy5kl1 2025-12-05T15:11:54,048 Created temporary directory: /tmp/pip-wheel-gb5p7zcg 2025-12-05T15:11:54,052 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2025-12-05T15:11:54,054 Created temporary directory: /tmp/pip-ephem-wheel-cache-33j6ip9s 2025-12-05T15:11:54,090 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-12-05T15:11:54,094 2 location(s) to search for versions of instanovo: 2025-12-05T15:11:54,094 * https://pypi.org/simple/instanovo/ 2025-12-05T15:11:54,094 * https://www.piwheels.org/simple/instanovo/ 2025-12-05T15:11:54,095 Fetching project page and analyzing links: https://pypi.org/simple/instanovo/ 2025-12-05T15:11:54,096 Getting page https://pypi.org/simple/instanovo/ 2025-12-05T15:11:54,097 Found index url https://pypi.org/simple 2025-12-05T15:11:54,326 Fetched page https://pypi.org/simple/instanovo/ as application/vnd.pypi.simple.v1+json 2025-12-05T15:11:54,332 Skipping link: No binaries permitted for instanovo: https://files.pythonhosted.org/packages/ef/c2/3d05dbba977c55aa432994de6481768faa485a8fbd641f3b5eeb45279846/instanovo-0.1.2-py3-none-any.whl (from https://pypi.org/simple/instanovo/) 2025-12-05T15:11:54,333 Found link https://files.pythonhosted.org/packages/4b/9d/1569c7da11d02ac10023156020e9ce8626fa1b570abb2af6058050fa0252/instanovo-0.1.2.tar.gz (from https://pypi.org/simple/instanovo/), version: 0.1.2 2025-12-05T15:11:54,334 Skipping link: No binaries permitted for instanovo: https://files.pythonhosted.org/packages/fe/54/2f3137bc8dfeb7393c9858ad72f1fc8fbad473cd7d2f832e91e38583363f/instanovo-0.1.3-py3-none-any.whl (from https://pypi.org/simple/instanovo/) 2025-12-05T15:11:54,335 Found link https://files.pythonhosted.org/packages/a5/2c/455872e598ce0ee284f9db076ad971af0f1375b6e5e50a8624feef542b8f/instanovo-0.1.3.tar.gz (from https://pypi.org/simple/instanovo/), version: 0.1.3 2025-12-05T15:11:54,336 Skipping link: No binaries permitted for instanovo: https://files.pythonhosted.org/packages/d2/78/cf474be5524f697e1b31f449c620811fc0c0c620c9a68ad51ff3e604bc43/instanovo-0.1.4-py3-none-any.whl (from https://pypi.org/simple/instanovo/) 2025-12-05T15:11:54,337 Found link https://files.pythonhosted.org/packages/17/6a/418ca0d811b39b7042b09ea9544bd3fb8e636c01b5a912b1780efa015a3c/instanovo-0.1.4.tar.gz (from https://pypi.org/simple/instanovo/), version: 0.1.4 2025-12-05T15:11:54,338 Skipping link: No binaries permitted for instanovo: https://files.pythonhosted.org/packages/08/6d/e01335d5d8e056a1695803f975346be9fb1dbdfaa5dbe35f845814244d36/instanovo-0.1.5-py3-none-any.whl (from https://pypi.org/simple/instanovo/) 2025-12-05T15:11:54,339 Found link https://files.pythonhosted.org/packages/06/1f/ea1a77eacab9a296d3c0b03e80581152e59c2564fbaa069706e792855f53/instanovo-0.1.5.tar.gz (from https://pypi.org/simple/instanovo/), version: 0.1.5 2025-12-05T15:11:54,339 Skipping link: No binaries permitted for instanovo: https://files.pythonhosted.org/packages/c5/b2/e9d0a472ceb47de6b5b167b9096a1205c5a2782cce5038b714ab31244759/instanovo-0.1.6-py3-none-any.whl (from https://pypi.org/simple/instanovo/) 2025-12-05T15:11:54,340 Found link https://files.pythonhosted.org/packages/b2/3a/90a53bcf12a4a56441f6460a96c757c558489824ee10e1f221ee6a12ecf1/instanovo-0.1.6.tar.gz (from https://pypi.org/simple/instanovo/), version: 0.1.6 2025-12-05T15:11:54,341 Skipping link: No binaries permitted for instanovo: https://files.pythonhosted.org/packages/ee/5b/6342af473e15358a3bb450b4dbdfdea1b6dc97fd907bb392f7ec29c10316/instanovo-0.1.7-py3-none-any.whl (from https://pypi.org/simple/instanovo/) 2025-12-05T15:11:54,343 Found link https://files.pythonhosted.org/packages/43/44/0ff9298f682a9b3f261aa8158fa59b77f7829a711fb8dd2e8139c7f2c371/instanovo-0.1.7.tar.gz (from https://pypi.org/simple/instanovo/), version: 0.1.7 2025-12-05T15:11:54,344 Skipping link: No binaries permitted for instanovo: https://files.pythonhosted.org/packages/10/f2/0f121a26c0b35fa9f962a68864afc75925295b909271e2ad18f2089831a6/instanovo-1.0.0-py3-none-any.whl (from https://pypi.org/simple/instanovo/) (requires-python:>=3.10) 2025-12-05T15:11:54,345 Found link https://files.pythonhosted.org/packages/12/a5/e97bec7c26bdd165f23108cb6c048ff50e75c3eced8b08b052c5e0d7ac25/instanovo-1.0.0.tar.gz (from https://pypi.org/simple/instanovo/) (requires-python:>=3.10), version: 1.0.0 2025-12-05T15:11:54,345 Skipping link: No binaries permitted for instanovo: https://files.pythonhosted.org/packages/bc/37/046a715581b2d04fafbcaf9466de4b1211798ac82316e79c9c16a18f9544/instanovo-1.1.0-py3-none-any.whl (from https://pypi.org/simple/instanovo/) (requires-python:<3.13,>=3.10) 2025-12-05T15:11:54,347 Found link https://files.pythonhosted.org/packages/8c/ae/abe65cd5cc1dd7d96687e8c57d6beb484c2444b4f9d936c273280d5f880e/instanovo-1.1.0.tar.gz (from https://pypi.org/simple/instanovo/) (requires-python:<3.13,>=3.10), version: 1.1.0 2025-12-05T15:11:54,348 Skipping link: No binaries permitted for instanovo: https://files.pythonhosted.org/packages/c9/8d/1c8ad0ac7d35d995586e6656cdff01b64f0d3c850b224879f55bbd3f7954/instanovo-1.1.1-py3-none-any.whl (from https://pypi.org/simple/instanovo/) (requires-python:<3.13,>=3.10) 2025-12-05T15:11:54,349 Found link https://files.pythonhosted.org/packages/cb/ec/269608b6ebb65c1616a26f31ab5babcf1b6956f777bc33ef39d95313522c/instanovo-1.1.1.tar.gz (from https://pypi.org/simple/instanovo/) (requires-python:<3.13,>=3.10), version: 1.1.1 2025-12-05T15:11:54,350 Skipping link: No binaries permitted for instanovo: https://files.pythonhosted.org/packages/3c/be/c25767deff9232c48388cbe494d2bb10116ac4312278f7e3052d69b72f88/instanovo-1.1.2-py3-none-any.whl (from https://pypi.org/simple/instanovo/) (requires-python:<3.13,>=3.10) 2025-12-05T15:11:54,351 Found link https://files.pythonhosted.org/packages/bb/18/0e786503c246c0ca9981599ad103949b85756ffa1ac9198100dc67918a0a/instanovo-1.1.2.tar.gz (from https://pypi.org/simple/instanovo/) (requires-python:<3.13,>=3.10), version: 1.1.2 2025-12-05T15:11:54,352 Skipping link: No binaries permitted for instanovo: https://files.pythonhosted.org/packages/19/01/e4d0c3a64e0bb2ab3081b409785cbe2cabae76f7341456390dbcdd6b842d/instanovo-1.1.3-py3-none-any.whl (from https://pypi.org/simple/instanovo/) (requires-python:<3.13,>=3.10) 2025-12-05T15:11:54,353 Found link https://files.pythonhosted.org/packages/f2/2c/371adea719103581919775285978caaf46879b4e38e29e4da534c453a97f/instanovo-1.1.3.tar.gz (from https://pypi.org/simple/instanovo/) (requires-python:<3.13,>=3.10), version: 1.1.3 2025-12-05T15:11:54,354 Skipping link: No binaries permitted for instanovo: https://files.pythonhosted.org/packages/b1/3e/3245653889d380bce40030323bda40a62c52890ce318d4107ef778a46393/instanovo-1.1.4-py3-none-any.whl (from https://pypi.org/simple/instanovo/) (requires-python:<3.13,>=3.10) 2025-12-05T15:11:54,355 Found link https://files.pythonhosted.org/packages/0c/16/478bc8a201ef17d1e68ed2502c3580d114ced8032645341fa5d14c01f355/instanovo-1.1.4.tar.gz (from https://pypi.org/simple/instanovo/) (requires-python:<3.13,>=3.10), version: 1.1.4 2025-12-05T15:11:54,356 Skipping link: No binaries permitted for instanovo: https://files.pythonhosted.org/packages/bb/42/4c4005d5550c6ad728e65dc1ae3f8f42b7301f9e827345de2b7154d1f093/instanovo-1.2.2-py3-none-any.whl (from https://pypi.org/simple/instanovo/) (requires-python:<3.14,>=3.10) 2025-12-05T15:11:54,357 Found link https://files.pythonhosted.org/packages/3d/5b/53228054f35a70c4baeda8a7dff4e41dec02759d2eaafaf4b27423cf4fc3/instanovo-1.2.2.tar.gz (from https://pypi.org/simple/instanovo/) (requires-python:<3.14,>=3.10), version: 1.2.2 2025-12-05T15:11:54,358 Fetching project page and analyzing links: https://www.piwheels.org/simple/instanovo/ 2025-12-05T15:11:54,359 Getting page https://www.piwheels.org/simple/instanovo/ 2025-12-05T15:11:54,360 Found index url https://www.piwheels.org/simple 2025-12-05T15:11:54,517 Fetched page https://www.piwheels.org/simple/instanovo/ as text/html 2025-12-05T15:11:54,522 Skipping link: No binaries permitted for instanovo: https://archive1.piwheels.org/simple/instanovo/instanovo-1.1.4-py3-none-any.whl#sha256=8a1cff5533603584ff339686cd7638694b2b39b137dd113d03fe74648d761064 (from https://www.piwheels.org/simple/instanovo/) (requires-python:<3.13,>=3.10) 2025-12-05T15:11:54,522 Skipping link: No binaries permitted for instanovo: https://archive1.piwheels.org/simple/instanovo/instanovo-1.1.3-py3-none-any.whl#sha256=79bbf32c7cfea99ddccee8889b69e63c180a581f5d5d7428e1165853120fa8a2 (from https://www.piwheels.org/simple/instanovo/) (requires-python:<3.13,>=3.10) 2025-12-05T15:11:54,523 Skipping link: No binaries permitted for instanovo: https://archive1.piwheels.org/simple/instanovo/instanovo-1.1.2-py3-none-any.whl#sha256=215c2b7d3022e56b172367e948424f97b84acf954960cee807f039c047335cc7 (from https://www.piwheels.org/simple/instanovo/) (requires-python:<3.13,>=3.10) 2025-12-05T15:11:54,523 Skipping link: No binaries permitted for instanovo: https://archive1.piwheels.org/simple/instanovo/instanovo-1.1.1-py3-none-any.whl#sha256=0a417cadbaad4676542d3be87e49472b945034a00e09ab3544b80b82042d9b20 (from https://www.piwheels.org/simple/instanovo/) (requires-python:<3.13,>=3.10) 2025-12-05T15:11:54,524 Skipping link: No binaries permitted for instanovo: https://archive1.piwheels.org/simple/instanovo/instanovo-1.1.0-py3-none-any.whl#sha256=500be1314ea430af7478a105143311ac18a66211d38bd262ff65e22eeface3fb (from https://www.piwheels.org/simple/instanovo/) (requires-python:<3.13,>=3.10) 2025-12-05T15:11:54,524 Skipping link: No binaries permitted for instanovo: https://archive1.piwheels.org/simple/instanovo/instanovo-1.0.0-py3-none-any.whl#sha256=13e1d65d6e0e323d129e3def079469ec7f0758dc4c3f26224680f6e07775c9b8 (from https://www.piwheels.org/simple/instanovo/) (requires-python:>=3.10) 2025-12-05T15:11:54,525 Skipping link: No binaries permitted for instanovo: https://archive1.piwheels.org/simple/instanovo/instanovo-0.1.7-py3-none-any.whl#sha256=bebfa6835cb7fa57c9fc7d68fb6d4b6403018fc99945453687f4e4ea8d4c3687 (from https://www.piwheels.org/simple/instanovo/) 2025-12-05T15:11:54,526 Skipping link: No binaries permitted for instanovo: https://archive1.piwheels.org/simple/instanovo/instanovo-0.1.6-py3-none-any.whl#sha256=29e8db8a4cf000389dc1a1a8994297b42277391391c86dbb6d06ab06156bcd2e (from https://www.piwheels.org/simple/instanovo/) 2025-12-05T15:11:54,526 Skipping link: No binaries permitted for instanovo: https://archive1.piwheels.org/simple/instanovo/instanovo-0.1.5-py3-none-any.whl#sha256=16610bf84cf1fbb521189f55a2dc536cfabf5144955dd7a4975b63aea3f9d6b8 (from https://www.piwheels.org/simple/instanovo/) 2025-12-05T15:11:54,527 Skipping link: No binaries permitted for instanovo: https://archive1.piwheels.org/simple/instanovo/instanovo-0.1.4-py3-none-any.whl#sha256=2fee2a986c3e3e30dbdd55f7b3498fd2c92a1fe98a34c19b6f1b0f6a18ba33a2 (from https://www.piwheels.org/simple/instanovo/) 2025-12-05T15:11:54,528 Skipping link: No binaries permitted for instanovo: https://archive1.piwheels.org/simple/instanovo/instanovo-0.1.3-py3-none-any.whl#sha256=f488c52ade86f73d2ad52e629083c891f0017bc68c20a213a5b3bc2cae1da553 (from https://www.piwheels.org/simple/instanovo/) 2025-12-05T15:11:54,529 Skipping link: No binaries permitted for instanovo: https://archive1.piwheels.org/simple/instanovo/instanovo-0.1.2-py3-none-any.whl#sha256=0ef17ebb41c8858941ca91fb8a543c0adca2a0dccc55af4ba471bb69d50149bc (from https://www.piwheels.org/simple/instanovo/) 2025-12-05T15:11:54,531 Skipping link: not a file: https://www.piwheels.org/simple/instanovo/ 2025-12-05T15:11:54,533 Skipping link: not a file: https://pypi.org/simple/instanovo/ 2025-12-05T15:11:54,567 Given no hashes to check 1 links for project 'instanovo': discarding no candidates 2025-12-05T15:11:54,596 Collecting instanovo==1.2.2 2025-12-05T15:11:54,600 Created temporary directory: /tmp/pip-unpack-300n1cjz 2025-12-05T15:11:54,749 Downloading instanovo-1.2.2.tar.gz (133 kB) 2025-12-05T15:11:55,134 Added instanovo==1.2.2 from https://files.pythonhosted.org/packages/3d/5b/53228054f35a70c4baeda8a7dff4e41dec02759d2eaafaf4b27423cf4fc3/instanovo-1.2.2.tar.gz to build tracker '/tmp/pip-build-tracker-4doy5kl1' 2025-12-05T15:11:55,144 Created temporary directory: /tmp/pip-build-env-kn68nbtk 2025-12-05T15:11:55,149 Installing build dependencies: started 2025-12-05T15:11:55,151 Running command pip subprocess to install build dependencies 2025-12-05T15:11:56,527 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2025-12-05T15:11:57,314 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2025-12-05T15:11:57,344 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-12-05T15:11:59,119 Collecting setuptools>=69.1.1 2025-12-05T15:11:59,237 Using cached https://www.piwheels.org/simple/setuptools/setuptools-80.9.0-py3-none-any.whl (1.2 MB) 2025-12-05T15:12:02,305 Installing collected packages: setuptools 2025-12-05T15:12:07,564 Successfully installed setuptools-80.9.0 2025-12-05T15:12:07,853 Installing build dependencies: finished with status 'done' 2025-12-05T15:12:07,864 Getting requirements to build wheel: started 2025-12-05T15:12:07,866 Running command Getting requirements to build wheel 2025-12-05T15:12:08,815 running egg_info 2025-12-05T15:12:08,822 writing instanovo.egg-info/PKG-INFO 2025-12-05T15:12:08,833 writing dependency_links to instanovo.egg-info/dependency_links.txt 2025-12-05T15:12:08,835 writing entry points to instanovo.egg-info/entry_points.txt 2025-12-05T15:12:08,841 writing requirements to instanovo.egg-info/requires.txt 2025-12-05T15:12:08,843 writing top-level names to instanovo.egg-info/top_level.txt 2025-12-05T15:12:08,899 reading manifest file 'instanovo.egg-info/SOURCES.txt' 2025-12-05T15:12:08,908 reading manifest template 'MANIFEST.in' 2025-12-05T15:12:08,940 adding license file 'LICENSE.md' 2025-12-05T15:12:08,946 writing manifest file 'instanovo.egg-info/SOURCES.txt' 2025-12-05T15:12:09,045 Getting requirements to build wheel: finished with status 'done' 2025-12-05T15:12:09,049 Created temporary directory: /tmp/pip-modern-metadata-y5n4c3gu 2025-12-05T15:12:09,053 Preparing metadata (pyproject.toml): started 2025-12-05T15:12:09,054 Running command Preparing metadata (pyproject.toml) 2025-12-05T15:12:09,907 running dist_info 2025-12-05T15:12:09,920 creating /tmp/pip-modern-metadata-y5n4c3gu/instanovo.egg-info 2025-12-05T15:12:09,921 writing /tmp/pip-modern-metadata-y5n4c3gu/instanovo.egg-info/PKG-INFO 2025-12-05T15:12:09,930 writing dependency_links to /tmp/pip-modern-metadata-y5n4c3gu/instanovo.egg-info/dependency_links.txt 2025-12-05T15:12:09,933 writing entry points to /tmp/pip-modern-metadata-y5n4c3gu/instanovo.egg-info/entry_points.txt 2025-12-05T15:12:09,938 writing requirements to /tmp/pip-modern-metadata-y5n4c3gu/instanovo.egg-info/requires.txt 2025-12-05T15:12:09,939 writing top-level names to /tmp/pip-modern-metadata-y5n4c3gu/instanovo.egg-info/top_level.txt 2025-12-05T15:12:09,941 writing manifest file '/tmp/pip-modern-metadata-y5n4c3gu/instanovo.egg-info/SOURCES.txt' 2025-12-05T15:12:09,982 reading manifest file '/tmp/pip-modern-metadata-y5n4c3gu/instanovo.egg-info/SOURCES.txt' 2025-12-05T15:12:09,986 reading manifest template 'MANIFEST.in' 2025-12-05T15:12:10,019 adding license file 'LICENSE.md' 2025-12-05T15:12:10,024 writing manifest file '/tmp/pip-modern-metadata-y5n4c3gu/instanovo.egg-info/SOURCES.txt' 2025-12-05T15:12:10,026 creating '/tmp/pip-modern-metadata-y5n4c3gu/instanovo-1.2.2.dist-info' 2025-12-05T15:12:10,176 Preparing metadata (pyproject.toml): finished with status 'done' 2025-12-05T15:12:10,182 Source in /tmp/pip-wheel-gb5p7zcg/instanovo_916e0055e65f4fcf9aa495740389dc65 has version 1.2.2, which satisfies requirement instanovo==1.2.2 from https://files.pythonhosted.org/packages/3d/5b/53228054f35a70c4baeda8a7dff4e41dec02759d2eaafaf4b27423cf4fc3/instanovo-1.2.2.tar.gz 2025-12-05T15:12:10,184 Removed instanovo==1.2.2 from https://files.pythonhosted.org/packages/3d/5b/53228054f35a70c4baeda8a7dff4e41dec02759d2eaafaf4b27423cf4fc3/instanovo-1.2.2.tar.gz from build tracker '/tmp/pip-build-tracker-4doy5kl1' 2025-12-05T15:12:10,190 Created temporary directory: /tmp/pip-unpack-vo8be6v1 2025-12-05T15:12:10,191 Building wheels for collected packages: instanovo 2025-12-05T15:12:10,196 Created temporary directory: /tmp/pip-wheel-kj7xm7_c 2025-12-05T15:12:10,197 Destination directory: /tmp/pip-wheel-kj7xm7_c 2025-12-05T15:12:10,203 Building wheel for instanovo (pyproject.toml): started 2025-12-05T15:12:10,204 Running command Building wheel for instanovo (pyproject.toml) 2025-12-05T15:12:11,005 running bdist_wheel 2025-12-05T15:12:11,029 running build 2025-12-05T15:12:11,030 running build_py 2025-12-05T15:12:11,037 creating build/lib/instanovo 2025-12-05T15:12:11,046 copying instanovo/__init__.py -> build/lib/instanovo 2025-12-05T15:12:11,049 copying instanovo/constants.py -> build/lib/instanovo 2025-12-05T15:12:11,055 copying instanovo/cli.py -> build/lib/instanovo 2025-12-05T15:12:11,058 copying instanovo/types.py -> build/lib/instanovo 2025-12-05T15:12:11,064 creating build/lib/instanovo/diffusion 2025-12-05T15:12:11,068 copying instanovo/diffusion/train.py -> build/lib/instanovo/diffusion 2025-12-05T15:12:11,072 copying instanovo/diffusion/model.py -> build/lib/instanovo/diffusion 2025-12-05T15:12:11,080 copying instanovo/diffusion/predict.py -> build/lib/instanovo/diffusion 2025-12-05T15:12:11,087 copying instanovo/diffusion/data.py -> build/lib/instanovo/diffusion 2025-12-05T15:12:11,091 copying instanovo/diffusion/multinomial_diffusion.py -> build/lib/instanovo/diffusion 2025-12-05T15:12:11,096 copying instanovo/diffusion/__init__.py -> build/lib/instanovo/diffusion 2025-12-05T15:12:11,101 copying instanovo/diffusion/cli.py -> build/lib/instanovo/diffusion 2025-12-05T15:12:11,103 copying instanovo/diffusion/layers.py -> build/lib/instanovo/diffusion 2025-12-05T15:12:11,109 creating build/lib/instanovo/inference 2025-12-05T15:12:11,113 copying instanovo/inference/greedy_search.py -> build/lib/instanovo/inference 2025-12-05T15:12:11,116 copying instanovo/inference/interfaces.py -> build/lib/instanovo/inference 2025-12-05T15:12:11,120 copying instanovo/inference/knapsack.py -> build/lib/instanovo/inference 2025-12-05T15:12:11,124 copying instanovo/inference/__init__.py -> build/lib/instanovo/inference 2025-12-05T15:12:11,126 copying instanovo/inference/diffusion.py -> build/lib/instanovo/inference 2025-12-05T15:12:11,130 copying instanovo/inference/beam_search.py -> build/lib/instanovo/inference 2025-12-05T15:12:11,136 copying instanovo/inference/knapsack_beam_search.py -> build/lib/instanovo/inference 2025-12-05T15:12:11,139 creating build/lib/instanovo/scripts 2025-12-05T15:12:11,142 copying instanovo/scripts/convert_to_sdf.py -> build/lib/instanovo/scripts 2025-12-05T15:12:11,147 copying instanovo/scripts/set_gcp_credentials.py -> build/lib/instanovo/scripts 2025-12-05T15:12:11,150 copying instanovo/scripts/update_ipc_format.py -> build/lib/instanovo/scripts 2025-12-05T15:12:11,152 copying instanovo/scripts/__init__.py -> build/lib/instanovo/scripts 2025-12-05T15:12:11,153 copying instanovo/scripts/get_zenodo_record.py -> build/lib/instanovo/scripts 2025-12-05T15:12:11,160 creating build/lib/instanovo/transformer 2025-12-05T15:12:11,163 copying instanovo/transformer/train.py -> build/lib/instanovo/transformer 2025-12-05T15:12:11,168 copying instanovo/transformer/model.py -> build/lib/instanovo/transformer 2025-12-05T15:12:11,171 copying instanovo/transformer/predict.py -> build/lib/instanovo/transformer 2025-12-05T15:12:11,174 copying instanovo/transformer/data.py -> build/lib/instanovo/transformer 2025-12-05T15:12:11,177 copying instanovo/transformer/__init__.py -> build/lib/instanovo/transformer 2025-12-05T15:12:11,178 copying instanovo/transformer/cli.py -> build/lib/instanovo/transformer 2025-12-05T15:12:11,181 copying instanovo/transformer/layers.py -> build/lib/instanovo/transformer 2025-12-05T15:12:11,185 creating build/lib/instanovo/utils 2025-12-05T15:12:11,188 copying instanovo/utils/metrics.py -> build/lib/instanovo/utils 2025-12-05T15:12:11,194 copying instanovo/utils/device_handler.py -> build/lib/instanovo/utils 2025-12-05T15:12:11,198 copying instanovo/utils/colorlogging.py -> build/lib/instanovo/utils 2025-12-05T15:12:11,201 copying instanovo/utils/file_downloader.py -> build/lib/instanovo/utils 2025-12-05T15:12:11,205 copying instanovo/utils/data_handler.py -> build/lib/instanovo/utils 2025-12-05T15:12:11,210 copying instanovo/utils/cli_utils.py -> build/lib/instanovo/utils 2025-12-05T15:12:11,213 copying instanovo/utils/msreader.py -> build/lib/instanovo/utils 2025-12-05T15:12:11,215 copying instanovo/utils/__init__.py -> build/lib/instanovo/utils 2025-12-05T15:12:11,218 copying instanovo/utils/residues.py -> build/lib/instanovo/utils 2025-12-05T15:12:11,221 copying instanovo/utils/s3.py -> build/lib/instanovo/utils 2025-12-05T15:12:11,225 creating build/lib/instanovo/common 2025-12-05T15:12:11,227 copying instanovo/common/dataset.py -> build/lib/instanovo/common 2025-12-05T15:12:11,232 copying instanovo/common/trainer.py -> build/lib/instanovo/common 2025-12-05T15:12:11,239 copying instanovo/common/__init__.py -> build/lib/instanovo/common 2025-12-05T15:12:11,244 copying instanovo/common/utils.py -> build/lib/instanovo/common 2025-12-05T15:12:11,247 copying instanovo/common/predictor.py -> build/lib/instanovo/common 2025-12-05T15:12:11,253 copying instanovo/common/scheduler.py -> build/lib/instanovo/common 2025-12-05T15:12:11,259 running egg_info 2025-12-05T15:12:11,272 writing instanovo.egg-info/PKG-INFO 2025-12-05T15:12:11,282 writing dependency_links to instanovo.egg-info/dependency_links.txt 2025-12-05T15:12:11,284 writing entry points to instanovo.egg-info/entry_points.txt 2025-12-05T15:12:11,289 writing requirements to instanovo.egg-info/requires.txt 2025-12-05T15:12:11,292 writing top-level names to instanovo.egg-info/top_level.txt 2025-12-05T15:12:11,321 reading manifest file 'instanovo.egg-info/SOURCES.txt' 2025-12-05T15:12:11,329 reading manifest template 'MANIFEST.in' 2025-12-05T15:12:11,358 adding license file 'LICENSE.md' 2025-12-05T15:12:11,364 writing manifest file 'instanovo.egg-info/SOURCES.txt' 2025-12-05T15:12:11,384 copying instanovo/models.json -> build/lib/instanovo 2025-12-05T15:12:11,387 creating build/lib/instanovo/configs 2025-12-05T15:12:11,388 copying instanovo/configs/instanovoplus_distill.yaml -> build/lib/instanovo/configs 2025-12-05T15:12:11,392 copying instanovo/configs/instanovoplus_unit_test.yaml -> build/lib/instanovo/configs 2025-12-05T15:12:11,396 copying instanovo/configs/instanovoplus.yaml -> build/lib/instanovo/configs 2025-12-05T15:12:11,402 copying instanovo/configs/instanovo.yaml -> build/lib/instanovo/configs 2025-12-05T15:12:11,406 copying instanovo/configs/instanovo_unit_test.yaml -> build/lib/instanovo/configs 2025-12-05T15:12:11,411 creating build/lib/instanovo/configs/finetune 2025-12-05T15:12:11,414 copying instanovo/configs/finetune/default.yaml -> build/lib/instanovo/configs/finetune 2025-12-05T15:12:11,420 creating build/lib/instanovo/configs/inference 2025-12-05T15:12:11,422 copying instanovo/configs/inference/default.yaml -> build/lib/instanovo/configs/inference 2025-12-05T15:12:11,425 copying instanovo/configs/inference/instanovo-p.yaml -> build/lib/instanovo/configs/inference 2025-12-05T15:12:11,429 copying instanovo/configs/inference/instanovo_with_refinement.yaml -> build/lib/instanovo/configs/inference 2025-12-05T15:12:11,435 copying instanovo/configs/inference/instanovoplus.yaml -> build/lib/instanovo/configs/inference 2025-12-05T15:12:11,437 copying instanovo/configs/inference/instanovoplus_pipeline.yaml -> build/lib/instanovo/configs/inference 2025-12-05T15:12:11,442 copying instanovo/configs/inference/instanovoplus_unit_test.yaml -> build/lib/instanovo/configs/inference 2025-12-05T15:12:11,445 copying instanovo/configs/inference/pipeline.yaml -> build/lib/instanovo/configs/inference 2025-12-05T15:12:11,448 copying instanovo/configs/inference/pipeline_unit_test.yaml -> build/lib/instanovo/configs/inference 2025-12-05T15:12:11,454 copying instanovo/configs/inference/unit_test.yaml -> build/lib/instanovo/configs/inference 2025-12-05T15:12:11,459 creating build/lib/instanovo/configs/dataset 2025-12-05T15:12:11,462 copying instanovo/configs/dataset/acpt.yaml -> build/lib/instanovo/configs/dataset 2025-12-05T15:12:11,466 copying instanovo/configs/dataset/default.yaml -> build/lib/instanovo/configs/dataset 2025-12-05T15:12:11,472 copying instanovo/configs/dataset/massivekb.yaml -> build/lib/instanovo/configs/dataset 2025-12-05T15:12:11,476 copying instanovo/configs/dataset/phospho.yaml -> build/lib/instanovo/configs/dataset 2025-12-05T15:12:11,479 copying instanovo/configs/dataset/unit_test.yaml -> build/lib/instanovo/configs/dataset 2025-12-05T15:12:11,484 creating build/lib/instanovo/configs/accelerate 2025-12-05T15:12:11,486 copying instanovo/configs/accelerate/aichor.yaml -> build/lib/instanovo/configs/accelerate 2025-12-05T15:12:11,495 copying instanovo/configs/accelerate/local.yaml -> build/lib/instanovo/configs/accelerate 2025-12-05T15:12:11,500 creating build/lib/instanovo/configs/model 2025-12-05T15:12:11,502 copying instanovo/configs/model/instanovo_8M.yaml -> build/lib/instanovo/configs/model 2025-12-05T15:12:11,506 copying instanovo/configs/model/instanovo_base.yaml -> build/lib/instanovo/configs/model 2025-12-05T15:12:11,510 copying instanovo/configs/model/instanovo_unit_test.yaml -> build/lib/instanovo/configs/model 2025-12-05T15:12:11,516 copying instanovo/configs/model/instanovoplus_base.yaml -> build/lib/instanovo/configs/model 2025-12-05T15:12:11,523 copying instanovo/configs/model/instanovoplus_small.yaml -> build/lib/instanovo/configs/model 2025-12-05T15:12:11,529 copying instanovo/configs/model/instanovoplus_unit_test.yaml -> build/lib/instanovo/configs/model 2025-12-05T15:12:11,536 creating build/lib/instanovo/configs/residues 2025-12-05T15:12:11,538 copying instanovo/configs/residues/default.yaml -> build/lib/instanovo/configs/residues 2025-12-05T15:12:11,546 copying instanovo/configs/residues/pride_extended.yaml -> build/lib/instanovo/configs/residues 2025-12-05T15:12:11,553 copying instanovo/configs/residues/unit_test.yaml -> build/lib/instanovo/configs/residues 2025-12-05T15:12:11,590 installing to build/bdist.linux-armv7l/wheel 2025-12-05T15:12:11,591 running install 2025-12-05T15:12:11,626 running install_lib 2025-12-05T15:12:11,633 creating build/bdist.linux-armv7l/wheel 2025-12-05T15:12:11,642 creating build/bdist.linux-armv7l/wheel/instanovo 2025-12-05T15:12:11,644 creating build/bdist.linux-armv7l/wheel/instanovo/configs 2025-12-05T15:12:11,646 copying build/lib/instanovo/configs/instanovoplus_distill.yaml -> build/bdist.linux-armv7l/wheel/./instanovo/configs 2025-12-05T15:12:11,649 copying build/lib/instanovo/configs/instanovoplus_unit_test.yaml -> build/bdist.linux-armv7l/wheel/./instanovo/configs 2025-12-05T15:12:11,652 copying build/lib/instanovo/configs/instanovoplus.yaml -> build/bdist.linux-armv7l/wheel/./instanovo/configs 2025-12-05T15:12:11,654 copying build/lib/instanovo/configs/instanovo.yaml -> build/bdist.linux-armv7l/wheel/./instanovo/configs 2025-12-05T15:12:11,659 creating build/bdist.linux-armv7l/wheel/instanovo/configs/finetune 2025-12-05T15:12:11,660 copying build/lib/instanovo/configs/finetune/default.yaml -> build/bdist.linux-armv7l/wheel/./instanovo/configs/finetune 2025-12-05T15:12:11,663 creating build/bdist.linux-armv7l/wheel/instanovo/configs/inference 2025-12-05T15:12:11,667 copying build/lib/instanovo/configs/inference/instanovoplus_unit_test.yaml -> build/bdist.linux-armv7l/wheel/./instanovo/configs/inference 2025-12-05T15:12:11,674 copying build/lib/instanovo/configs/inference/instanovoplus_pipeline.yaml -> build/bdist.linux-armv7l/wheel/./instanovo/configs/inference 2025-12-05T15:12:11,678 copying build/lib/instanovo/configs/inference/instanovoplus.yaml -> build/bdist.linux-armv7l/wheel/./instanovo/configs/inference 2025-12-05T15:12:11,681 copying build/lib/instanovo/configs/inference/instanovo_with_refinement.yaml -> build/bdist.linux-armv7l/wheel/./instanovo/configs/inference 2025-12-05T15:12:11,684 copying build/lib/instanovo/configs/inference/unit_test.yaml -> build/bdist.linux-armv7l/wheel/./instanovo/configs/inference 2025-12-05T15:12:11,687 copying build/lib/instanovo/configs/inference/pipeline_unit_test.yaml -> build/bdist.linux-armv7l/wheel/./instanovo/configs/inference 2025-12-05T15:12:11,690 copying build/lib/instanovo/configs/inference/instanovo-p.yaml -> build/bdist.linux-armv7l/wheel/./instanovo/configs/inference 2025-12-05T15:12:11,693 copying build/lib/instanovo/configs/inference/pipeline.yaml -> build/bdist.linux-armv7l/wheel/./instanovo/configs/inference 2025-12-05T15:12:11,697 copying build/lib/instanovo/configs/inference/default.yaml -> build/bdist.linux-armv7l/wheel/./instanovo/configs/inference 2025-12-05T15:12:11,700 creating build/bdist.linux-armv7l/wheel/instanovo/configs/dataset 2025-12-05T15:12:11,701 copying build/lib/instanovo/configs/dataset/acpt.yaml -> build/bdist.linux-armv7l/wheel/./instanovo/configs/dataset 2025-12-05T15:12:11,707 copying build/lib/instanovo/configs/dataset/phospho.yaml -> build/bdist.linux-armv7l/wheel/./instanovo/configs/dataset 2025-12-05T15:12:11,712 copying build/lib/instanovo/configs/dataset/unit_test.yaml -> build/bdist.linux-armv7l/wheel/./instanovo/configs/dataset 2025-12-05T15:12:11,717 copying build/lib/instanovo/configs/dataset/default.yaml -> build/bdist.linux-armv7l/wheel/./instanovo/configs/dataset 2025-12-05T15:12:11,721 copying build/lib/instanovo/configs/dataset/massivekb.yaml -> build/bdist.linux-armv7l/wheel/./instanovo/configs/dataset 2025-12-05T15:12:11,724 creating build/bdist.linux-armv7l/wheel/instanovo/configs/accelerate 2025-12-05T15:12:11,726 copying build/lib/instanovo/configs/accelerate/aichor.yaml -> build/bdist.linux-armv7l/wheel/./instanovo/configs/accelerate 2025-12-05T15:12:11,729 copying build/lib/instanovo/configs/accelerate/local.yaml -> build/bdist.linux-armv7l/wheel/./instanovo/configs/accelerate 2025-12-05T15:12:11,732 creating build/bdist.linux-armv7l/wheel/instanovo/configs/model 2025-12-05T15:12:11,735 copying build/lib/instanovo/configs/model/instanovoplus_unit_test.yaml -> build/bdist.linux-armv7l/wheel/./instanovo/configs/model 2025-12-05T15:12:11,738 copying build/lib/instanovo/configs/model/instanovoplus_small.yaml -> build/bdist.linux-armv7l/wheel/./instanovo/configs/model 2025-12-05T15:12:11,741 copying build/lib/instanovo/configs/model/instanovo_8M.yaml -> build/bdist.linux-armv7l/wheel/./instanovo/configs/model 2025-12-05T15:12:11,748 copying build/lib/instanovo/configs/model/instanovo_base.yaml -> build/bdist.linux-armv7l/wheel/./instanovo/configs/model 2025-12-05T15:12:11,751 copying build/lib/instanovo/configs/model/instanovoplus_base.yaml -> build/bdist.linux-armv7l/wheel/./instanovo/configs/model 2025-12-05T15:12:11,754 copying build/lib/instanovo/configs/model/instanovo_unit_test.yaml -> build/bdist.linux-armv7l/wheel/./instanovo/configs/model 2025-12-05T15:12:11,756 copying build/lib/instanovo/configs/instanovo_unit_test.yaml -> build/bdist.linux-armv7l/wheel/./instanovo/configs 2025-12-05T15:12:11,761 creating build/bdist.linux-armv7l/wheel/instanovo/configs/residues 2025-12-05T15:12:11,763 copying build/lib/instanovo/configs/residues/unit_test.yaml -> build/bdist.linux-armv7l/wheel/./instanovo/configs/residues 2025-12-05T15:12:11,765 copying build/lib/instanovo/configs/residues/pride_extended.yaml -> build/bdist.linux-armv7l/wheel/./instanovo/configs/residues 2025-12-05T15:12:11,770 copying build/lib/instanovo/configs/residues/default.yaml -> build/bdist.linux-armv7l/wheel/./instanovo/configs/residues 2025-12-05T15:12:11,772 creating build/bdist.linux-armv7l/wheel/instanovo/diffusion 2025-12-05T15:12:11,775 copying build/lib/instanovo/diffusion/train.py -> build/bdist.linux-armv7l/wheel/./instanovo/diffusion 2025-12-05T15:12:11,778 copying build/lib/instanovo/diffusion/model.py -> build/bdist.linux-armv7l/wheel/./instanovo/diffusion 2025-12-05T15:12:11,782 copying build/lib/instanovo/diffusion/predict.py -> build/bdist.linux-armv7l/wheel/./instanovo/diffusion 2025-12-05T15:12:11,784 copying build/lib/instanovo/diffusion/data.py -> build/bdist.linux-armv7l/wheel/./instanovo/diffusion 2025-12-05T15:12:11,789 copying build/lib/instanovo/diffusion/multinomial_diffusion.py -> build/bdist.linux-armv7l/wheel/./instanovo/diffusion 2025-12-05T15:12:11,794 copying build/lib/instanovo/diffusion/__init__.py -> build/bdist.linux-armv7l/wheel/./instanovo/diffusion 2025-12-05T15:12:11,796 copying build/lib/instanovo/diffusion/cli.py -> build/bdist.linux-armv7l/wheel/./instanovo/diffusion 2025-12-05T15:12:11,800 copying build/lib/instanovo/diffusion/layers.py -> build/bdist.linux-armv7l/wheel/./instanovo/diffusion 2025-12-05T15:12:11,804 creating build/bdist.linux-armv7l/wheel/instanovo/inference 2025-12-05T15:12:11,805 copying build/lib/instanovo/inference/greedy_search.py -> build/bdist.linux-armv7l/wheel/./instanovo/inference 2025-12-05T15:12:11,810 copying build/lib/instanovo/inference/interfaces.py -> build/bdist.linux-armv7l/wheel/./instanovo/inference 2025-12-05T15:12:11,814 copying build/lib/instanovo/inference/knapsack.py -> build/bdist.linux-armv7l/wheel/./instanovo/inference 2025-12-05T15:12:11,817 copying build/lib/instanovo/inference/__init__.py -> build/bdist.linux-armv7l/wheel/./instanovo/inference 2025-12-05T15:12:11,819 copying build/lib/instanovo/inference/diffusion.py -> build/bdist.linux-armv7l/wheel/./instanovo/inference 2025-12-05T15:12:11,824 copying build/lib/instanovo/inference/beam_search.py -> build/bdist.linux-armv7l/wheel/./instanovo/inference 2025-12-05T15:12:11,827 copying build/lib/instanovo/inference/knapsack_beam_search.py -> build/bdist.linux-armv7l/wheel/./instanovo/inference 2025-12-05T15:12:11,833 creating build/bdist.linux-armv7l/wheel/instanovo/scripts 2025-12-05T15:12:11,835 copying build/lib/instanovo/scripts/convert_to_sdf.py -> build/bdist.linux-armv7l/wheel/./instanovo/scripts 2025-12-05T15:12:11,838 copying build/lib/instanovo/scripts/set_gcp_credentials.py -> build/bdist.linux-armv7l/wheel/./instanovo/scripts 2025-12-05T15:12:11,841 copying build/lib/instanovo/scripts/update_ipc_format.py -> build/bdist.linux-armv7l/wheel/./instanovo/scripts 2025-12-05T15:12:11,846 copying build/lib/instanovo/scripts/__init__.py -> build/bdist.linux-armv7l/wheel/./instanovo/scripts 2025-12-05T15:12:11,848 copying build/lib/instanovo/scripts/get_zenodo_record.py -> build/bdist.linux-armv7l/wheel/./instanovo/scripts 2025-12-05T15:12:11,851 copying build/lib/instanovo/__init__.py -> build/bdist.linux-armv7l/wheel/./instanovo 2025-12-05T15:12:11,858 creating build/bdist.linux-armv7l/wheel/instanovo/transformer 2025-12-05T15:12:11,860 copying build/lib/instanovo/transformer/train.py -> build/bdist.linux-armv7l/wheel/./instanovo/transformer 2025-12-05T15:12:11,863 copying build/lib/instanovo/transformer/model.py -> build/bdist.linux-armv7l/wheel/./instanovo/transformer 2025-12-05T15:12:11,868 copying build/lib/instanovo/transformer/predict.py -> build/bdist.linux-armv7l/wheel/./instanovo/transformer 2025-12-05T15:12:11,871 copying build/lib/instanovo/transformer/data.py -> build/bdist.linux-armv7l/wheel/./instanovo/transformer 2025-12-05T15:12:11,876 copying build/lib/instanovo/transformer/__init__.py -> build/bdist.linux-armv7l/wheel/./instanovo/transformer 2025-12-05T15:12:11,878 copying build/lib/instanovo/transformer/cli.py -> build/bdist.linux-armv7l/wheel/./instanovo/transformer 2025-12-05T15:12:11,883 copying build/lib/instanovo/transformer/layers.py -> build/bdist.linux-armv7l/wheel/./instanovo/transformer 2025-12-05T15:12:11,888 copying build/lib/instanovo/constants.py -> build/bdist.linux-armv7l/wheel/./instanovo 2025-12-05T15:12:11,895 creating build/bdist.linux-armv7l/wheel/instanovo/utils 2025-12-05T15:12:11,897 copying build/lib/instanovo/utils/metrics.py -> build/bdist.linux-armv7l/wheel/./instanovo/utils 2025-12-05T15:12:11,901 copying build/lib/instanovo/utils/device_handler.py -> build/bdist.linux-armv7l/wheel/./instanovo/utils 2025-12-05T15:12:11,905 copying build/lib/instanovo/utils/colorlogging.py -> build/bdist.linux-armv7l/wheel/./instanovo/utils 2025-12-05T15:12:11,908 copying build/lib/instanovo/utils/file_downloader.py -> build/bdist.linux-armv7l/wheel/./instanovo/utils 2025-12-05T15:12:11,911 copying build/lib/instanovo/utils/data_handler.py -> build/bdist.linux-armv7l/wheel/./instanovo/utils 2025-12-05T15:12:11,916 copying build/lib/instanovo/utils/cli_utils.py -> build/bdist.linux-armv7l/wheel/./instanovo/utils 2025-12-05T15:12:11,920 copying build/lib/instanovo/utils/msreader.py -> build/bdist.linux-armv7l/wheel/./instanovo/utils 2025-12-05T15:12:11,926 copying build/lib/instanovo/utils/__init__.py -> build/bdist.linux-armv7l/wheel/./instanovo/utils 2025-12-05T15:12:11,928 copying build/lib/instanovo/utils/residues.py -> build/bdist.linux-armv7l/wheel/./instanovo/utils 2025-12-05T15:12:11,931 copying build/lib/instanovo/utils/s3.py -> build/bdist.linux-armv7l/wheel/./instanovo/utils 2025-12-05T15:12:11,939 creating build/bdist.linux-armv7l/wheel/instanovo/common 2025-12-05T15:12:11,940 copying build/lib/instanovo/common/dataset.py -> build/bdist.linux-armv7l/wheel/./instanovo/common 2025-12-05T15:12:11,945 copying build/lib/instanovo/common/trainer.py -> build/bdist.linux-armv7l/wheel/./instanovo/common 2025-12-05T15:12:11,951 copying build/lib/instanovo/common/__init__.py -> build/bdist.linux-armv7l/wheel/./instanovo/common 2025-12-05T15:12:11,955 copying build/lib/instanovo/common/utils.py -> build/bdist.linux-armv7l/wheel/./instanovo/common 2025-12-05T15:12:11,959 copying build/lib/instanovo/common/predictor.py -> build/bdist.linux-armv7l/wheel/./instanovo/common 2025-12-05T15:12:11,964 copying build/lib/instanovo/common/scheduler.py -> build/bdist.linux-armv7l/wheel/./instanovo/common 2025-12-05T15:12:11,967 copying build/lib/instanovo/cli.py -> build/bdist.linux-armv7l/wheel/./instanovo 2025-12-05T15:12:11,973 copying build/lib/instanovo/models.json -> build/bdist.linux-armv7l/wheel/./instanovo 2025-12-05T15:12:11,976 copying build/lib/instanovo/types.py -> build/bdist.linux-armv7l/wheel/./instanovo 2025-12-05T15:12:11,978 running install_egg_info 2025-12-05T15:12:11,985 Copying instanovo.egg-info to build/bdist.linux-armv7l/wheel/./instanovo-1.2.2-py3.11.egg-info 2025-12-05T15:12:12,006 running install_scripts 2025-12-05T15:12:12,033 creating build/bdist.linux-armv7l/wheel/instanovo-1.2.2.dist-info/WHEEL 2025-12-05T15:12:12,036 creating '/tmp/pip-wheel-kj7xm7_c/.tmp-afca3hbm/instanovo-1.2.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-12-05T15:12:12,038 adding 'instanovo/__init__.py' 2025-12-05T15:12:12,040 adding 'instanovo/cli.py' 2025-12-05T15:12:12,042 adding 'instanovo/constants.py' 2025-12-05T15:12:12,044 adding 'instanovo/models.json' 2025-12-05T15:12:12,045 adding 'instanovo/types.py' 2025-12-05T15:12:12,050 adding 'instanovo/common/__init__.py' 2025-12-05T15:12:12,051 adding 'instanovo/common/dataset.py' 2025-12-05T15:12:12,057 adding 'instanovo/common/predictor.py' 2025-12-05T15:12:12,058 adding 'instanovo/common/scheduler.py' 2025-12-05T15:12:12,064 adding 'instanovo/common/trainer.py' 2025-12-05T15:12:12,068 adding 'instanovo/common/utils.py' 2025-12-05T15:12:12,071 adding 'instanovo/configs/instanovo.yaml' 2025-12-05T15:12:12,074 adding 'instanovo/configs/instanovo_unit_test.yaml' 2025-12-05T15:12:12,076 adding 'instanovo/configs/instanovoplus.yaml' 2025-12-05T15:12:12,079 adding 'instanovo/configs/instanovoplus_distill.yaml' 2025-12-05T15:12:12,080 adding 'instanovo/configs/instanovoplus_unit_test.yaml' 2025-12-05T15:12:12,082 adding 'instanovo/configs/accelerate/aichor.yaml' 2025-12-05T15:12:12,083 adding 'instanovo/configs/accelerate/local.yaml' 2025-12-05T15:12:12,086 adding 'instanovo/configs/dataset/acpt.yaml' 2025-12-05T15:12:12,087 adding 'instanovo/configs/dataset/default.yaml' 2025-12-05T15:12:12,088 adding 'instanovo/configs/dataset/massivekb.yaml' 2025-12-05T15:12:12,091 adding 'instanovo/configs/dataset/phospho.yaml' 2025-12-05T15:12:12,093 adding 'instanovo/configs/dataset/unit_test.yaml' 2025-12-05T15:12:12,095 adding 'instanovo/configs/finetune/default.yaml' 2025-12-05T15:12:12,099 adding 'instanovo/configs/inference/default.yaml' 2025-12-05T15:12:12,101 adding 'instanovo/configs/inference/instanovo-p.yaml' 2025-12-05T15:12:12,104 adding 'instanovo/configs/inference/instanovo_with_refinement.yaml' 2025-12-05T15:12:12,106 adding 'instanovo/configs/inference/instanovoplus.yaml' 2025-12-05T15:12:12,107 adding 'instanovo/configs/inference/instanovoplus_pipeline.yaml' 2025-12-05T15:12:12,109 adding 'instanovo/configs/inference/instanovoplus_unit_test.yaml' 2025-12-05T15:12:12,110 adding 'instanovo/configs/inference/pipeline.yaml' 2025-12-05T15:12:12,111 adding 'instanovo/configs/inference/pipeline_unit_test.yaml' 2025-12-05T15:12:12,113 adding 'instanovo/configs/inference/unit_test.yaml' 2025-12-05T15:12:12,115 adding 'instanovo/configs/model/instanovo_8M.yaml' 2025-12-05T15:12:12,117 adding 'instanovo/configs/model/instanovo_base.yaml' 2025-12-05T15:12:12,119 adding 'instanovo/configs/model/instanovo_unit_test.yaml' 2025-12-05T15:12:12,121 adding 'instanovo/configs/model/instanovoplus_base.yaml' 2025-12-05T15:12:12,122 adding 'instanovo/configs/model/instanovoplus_small.yaml' 2025-12-05T15:12:12,123 adding 'instanovo/configs/model/instanovoplus_unit_test.yaml' 2025-12-05T15:12:12,125 adding 'instanovo/configs/residues/default.yaml' 2025-12-05T15:12:12,127 adding 'instanovo/configs/residues/pride_extended.yaml' 2025-12-05T15:12:12,129 adding 'instanovo/configs/residues/unit_test.yaml' 2025-12-05T15:12:12,131 adding 'instanovo/diffusion/__init__.py' 2025-12-05T15:12:12,133 adding 'instanovo/diffusion/cli.py' 2025-12-05T15:12:12,134 adding 'instanovo/diffusion/data.py' 2025-12-05T15:12:12,136 adding 'instanovo/diffusion/layers.py' 2025-12-05T15:12:12,138 adding 'instanovo/diffusion/model.py' 2025-12-05T15:12:12,142 adding 'instanovo/diffusion/multinomial_diffusion.py' 2025-12-05T15:12:12,145 adding 'instanovo/diffusion/predict.py' 2025-12-05T15:12:12,146 adding 'instanovo/diffusion/train.py' 2025-12-05T15:12:12,148 adding 'instanovo/inference/__init__.py' 2025-12-05T15:12:12,152 adding 'instanovo/inference/beam_search.py' 2025-12-05T15:12:12,154 adding 'instanovo/inference/diffusion.py' 2025-12-05T15:12:12,157 adding 'instanovo/inference/greedy_search.py' 2025-12-05T15:12:12,160 adding 'instanovo/inference/interfaces.py' 2025-12-05T15:12:12,162 adding 'instanovo/inference/knapsack.py' 2025-12-05T15:12:12,165 adding 'instanovo/inference/knapsack_beam_search.py' 2025-12-05T15:12:12,167 adding 'instanovo/scripts/__init__.py' 2025-12-05T15:12:12,169 adding 'instanovo/scripts/convert_to_sdf.py' 2025-12-05T15:12:12,171 adding 'instanovo/scripts/get_zenodo_record.py' 2025-12-05T15:12:12,172 adding 'instanovo/scripts/set_gcp_credentials.py' 2025-12-05T15:12:12,175 adding 'instanovo/scripts/update_ipc_format.py' 2025-12-05T15:12:12,178 adding 'instanovo/transformer/__init__.py' 2025-12-05T15:12:12,180 adding 'instanovo/transformer/cli.py' 2025-12-05T15:12:12,183 adding 'instanovo/transformer/data.py' 2025-12-05T15:12:12,186 adding 'instanovo/transformer/layers.py' 2025-12-05T15:12:12,189 adding 'instanovo/transformer/model.py' 2025-12-05T15:12:12,191 adding 'instanovo/transformer/predict.py' 2025-12-05T15:12:12,193 adding 'instanovo/transformer/train.py' 2025-12-05T15:12:12,195 adding 'instanovo/utils/__init__.py' 2025-12-05T15:12:12,196 adding 'instanovo/utils/cli_utils.py' 2025-12-05T15:12:12,198 adding 'instanovo/utils/colorlogging.py' 2025-12-05T15:12:12,206 adding 'instanovo/utils/data_handler.py' 2025-12-05T15:12:12,207 adding 'instanovo/utils/device_handler.py' 2025-12-05T15:12:12,209 adding 'instanovo/utils/file_downloader.py' 2025-12-05T15:12:12,210 adding 'instanovo/utils/metrics.py' 2025-12-05T15:12:12,211 adding 'instanovo/utils/msreader.py' 2025-12-05T15:12:12,214 adding 'instanovo/utils/residues.py' 2025-12-05T15:12:12,216 adding 'instanovo/utils/s3.py' 2025-12-05T15:12:12,224 adding 'instanovo-1.2.2.dist-info/licenses/LICENSE.md' 2025-12-05T15:12:12,226 adding 'instanovo-1.2.2.dist-info/METADATA' 2025-12-05T15:12:12,227 adding 'instanovo-1.2.2.dist-info/WHEEL' 2025-12-05T15:12:12,228 adding 'instanovo-1.2.2.dist-info/entry_points.txt' 2025-12-05T15:12:12,229 adding 'instanovo-1.2.2.dist-info/top_level.txt' 2025-12-05T15:12:12,230 adding 'instanovo-1.2.2.dist-info/RECORD' 2025-12-05T15:12:12,234 removing build/bdist.linux-armv7l/wheel 2025-12-05T15:12:12,390 Building wheel for instanovo (pyproject.toml): finished with status 'done' 2025-12-05T15:12:12,405 Created wheel for instanovo: filename=instanovo-1.2.2-py3-none-any.whl size=164800 sha256=546873f18d2e03ea10d30f945f7b0792cedbad7067554fbbfe2fea6ae4306a3a 2025-12-05T15:12:12,407 Stored in directory: /tmp/pip-ephem-wheel-cache-33j6ip9s/wheels/69/e9/02/a5949c8af320651f3b351442b9e143dcfc71e4f44102322e41 2025-12-05T15:12:12,435 Successfully built instanovo 2025-12-05T15:12:12,447 Removed build tracker: '/tmp/pip-build-tracker-4doy5kl1'