2025-12-09T10:13:30,510 Created temporary directory: /tmp/pip-ephem-wheel-cache-e4_ot8hj
2025-12-09T10:13:30,512 Created temporary directory: /tmp/pip-build-tracker-tztap4qg
2025-12-09T10:13:30,512 Initialized build tracking at /tmp/pip-build-tracker-tztap4qg
2025-12-09T10:13:30,513 Created build tracker: /tmp/pip-build-tracker-tztap4qg
2025-12-09T10:13:30,513 Entered build tracker: /tmp/pip-build-tracker-tztap4qg
2025-12-09T10:13:30,514 Created temporary directory: /tmp/pip-wheel-88ylg09l
2025-12-09T10:13:30,517 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2025-12-09T10:13:30,519 Created temporary directory: /tmp/pip-ephem-wheel-cache-co63wtxc
2025-12-09T10:13:30,540 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2025-12-09T10:13:30,544 2 location(s) to search for versions of pybiotk:
2025-12-09T10:13:30,544 * https://pypi.org/simple/pybiotk/
2025-12-09T10:13:30,544 * https://www.piwheels.org/simple/pybiotk/
2025-12-09T10:13:30,545 Fetching project page and analyzing links: https://pypi.org/simple/pybiotk/
2025-12-09T10:13:30,545 Getting page https://pypi.org/simple/pybiotk/
2025-12-09T10:13:30,547 Found index url https://pypi.org/simple
2025-12-09T10:13:30,764 Fetched page https://pypi.org/simple/pybiotk/ as application/vnd.pypi.simple.v1+json
2025-12-09T10:13:30,768   Found link https://files.pythonhosted.org/packages/36/39/63bca353f534b61d1b4d184594aa908e15c1ed647e1e722bfcf9ee064dbc/pybiotk-1.0.3.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.0.3
2025-12-09T10:13:30,769   Found link https://files.pythonhosted.org/packages/c2/63/fd2b3ca946c51dc23242f873ba230b22d55298bd2eb2df0fe06a648e6849/pybiotk-1.0.4.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.0.4
2025-12-09T10:13:30,770   Found link https://files.pythonhosted.org/packages/67/96/a92ce5cf084e83cb215b8d8e9656d5bcfe22ae834956bd208e796b50da16/pybiotk-1.0.6.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.0.6
2025-12-09T10:13:30,770   Found link https://files.pythonhosted.org/packages/be/b5/ff3128b3a5181f7169f2fb8072ae82e4589c45e3c08c3964fc77b897a8cf/pybiotk-1.0.7.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.0.7
2025-12-09T10:13:30,771   Found link https://files.pythonhosted.org/packages/b7/60/f27ad0c199d09158de9f172415057312c69a824f3589e43787ea24925448/pybiotk-1.0.8.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.0.8
2025-12-09T10:13:30,772   Found link https://files.pythonhosted.org/packages/fb/74/d26be594d8fc95a6bf87a98c26341ec248f2bb6fe50fa7a78419c8a152d9/pybiotk-1.0.9.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.0.9
2025-12-09T10:13:30,772   Found link https://files.pythonhosted.org/packages/23/04/fd2a2b3b3177b01265b141db5e1cd962f2e7d435a3cafb23631c2f22076c/pybiotk-1.1.0.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.1.0
2025-12-09T10:13:30,773   Found link https://files.pythonhosted.org/packages/01/7b/9e6f646c28b48a6ef9a434a1b8169c7ec6b8ee8e5ce135c6aa60284ddb84/pybiotk-1.1.1.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.1.1
2025-12-09T10:13:30,774   Found link https://files.pythonhosted.org/packages/f7/2d/b38d75abba8592955a86e4d86c64229b02b37582049427c21925443b1807/pybiotk-1.2.0.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.2.0
2025-12-09T10:13:30,774   Found link https://files.pythonhosted.org/packages/d3/45/4f60c095cbd938d73427d73089a67014adb3f91d0b4f5b0e52a815bd550e/pybiotk-1.2.1.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.2.1
2025-12-09T10:13:30,775   Found link https://files.pythonhosted.org/packages/df/39/c06c8538af00a45170fa6216e13703fefeee2b5b195227cacff55d94e8bb/pybiotk-1.2.3.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.2.3
2025-12-09T10:13:30,776   Found link https://files.pythonhosted.org/packages/fb/15/83e8498512e533c13bf14dd62b83cf20da537c315092519e3930e43b3950/pybiotk-1.2.5.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.2.5
2025-12-09T10:13:30,776   Found link https://files.pythonhosted.org/packages/2f/ec/9b017cf466b5e2489566c1efb857b51519c4446d7d936bd00e26cbd0a0a3/pybiotk-1.2.6.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.2.6
2025-12-09T10:13:30,777   Found link https://files.pythonhosted.org/packages/c9/89/e369e981702b24082a840ab6e988062653b861ccd9bab4cfd7ec1e625c8b/pybiotk-1.2.7.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.2.7
2025-12-09T10:13:30,777   Found link https://files.pythonhosted.org/packages/5e/18/245e4c2f522ab75d284adf9b93c3f72afa9d063b935452ad6a6409d1d7b1/pybiotk-1.2.8.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.2.8
2025-12-09T10:13:30,778   Found link https://files.pythonhosted.org/packages/63/26/5db926166c121d9fc57026e9872b9f2d8ff53eb6d787313a4463d9554466/pybiotk-1.2.9.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.2.9
2025-12-09T10:13:30,779   Found link https://files.pythonhosted.org/packages/8d/20/640d160d37e3cfb8a2a9358f7dbea8b4cfd1a07d75bd6144edc1fbe5d177/pybiotk-1.3.0.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.3.0
2025-12-09T10:13:30,779   Found link https://files.pythonhosted.org/packages/8f/f7/90604270b034249c20d64b65ac7a129c288b481bf6236247f46e15e51f6f/pybiotk-1.3.1.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.3.1
2025-12-09T10:13:30,780   Found link https://files.pythonhosted.org/packages/b0/0f/30a06c8030cd992c89d124f52fb932cc41f935867f327120b51e3146e366/pybiotk-1.3.2.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.3.2
2025-12-09T10:13:30,780   Found link https://files.pythonhosted.org/packages/d2/a0/274b0500ae874503a7b9af29732976cd3e4fddf97f40cf2135b58c26e7ed/pybiotk-1.3.3.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.3.3
2025-12-09T10:13:30,781 Fetching project page and analyzing links: https://www.piwheels.org/simple/pybiotk/
2025-12-09T10:13:30,782 Getting page https://www.piwheels.org/simple/pybiotk/
2025-12-09T10:13:30,783 Found index url https://www.piwheels.org/simple
2025-12-09T10:13:30,945 Fetched page https://www.piwheels.org/simple/pybiotk/ as text/html
2025-12-09T10:13:30,974   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.3.2-cp311-cp311-linux_armv6l.whl#sha256=38d85779e3e453f2759e08bb30d2c8b846a2f0106e6c72b0b6ace785ed7aa5ce (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:30,975   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.3.2-cp311-cp311-linux_armv7l.whl#sha256=38d85779e3e453f2759e08bb30d2c8b846a2f0106e6c72b0b6ace785ed7aa5ce (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:30,976   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.3.2-cp39-cp39-linux_armv6l.whl#sha256=d688cf90532abee1dc9ab620e73f72e39cd7e010effe39781691ea7e3ce828ea (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:30,977   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.3.2-cp39-cp39-linux_armv7l.whl#sha256=d688cf90532abee1dc9ab620e73f72e39cd7e010effe39781691ea7e3ce828ea (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:30,978   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.3.2-cp313-cp313-linux_armv6l.whl#sha256=7794167849a7154181a4002241ef8b276a9236e95c92cee36256dc3a6240f2fd (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:30,978   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.3.2-cp313-cp313-linux_armv7l.whl#sha256=7794167849a7154181a4002241ef8b276a9236e95c92cee36256dc3a6240f2fd (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:30,979   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.3.1-cp39-cp39-linux_armv6l.whl#sha256=a8d91c0615bc8cd73e1925ad04e45ef11bd364419c3da24d465503e6baa6cf8c (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:30,980   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.3.1-cp39-cp39-linux_armv7l.whl#sha256=a8d91c0615bc8cd73e1925ad04e45ef11bd364419c3da24d465503e6baa6cf8c (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:30,981   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.3.1-cp311-cp311-linux_armv6l.whl#sha256=5c27f82d2e7329e11cf8f80d132a081e6fce3214dfe16e9237226ed99058c0ed (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:30,982   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.3.1-cp311-cp311-linux_armv7l.whl#sha256=5c27f82d2e7329e11cf8f80d132a081e6fce3214dfe16e9237226ed99058c0ed (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:30,983   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.3.1-cp313-cp313-linux_armv6l.whl#sha256=478498b154cc82c23a2f57ddf0b40b4b277d81fd5ee55da69e65634dc8cc9237 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:30,983   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.3.1-cp313-cp313-linux_armv7l.whl#sha256=478498b154cc82c23a2f57ddf0b40b4b277d81fd5ee55da69e65634dc8cc9237 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:30,984   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.3.0-cp311-cp311-linux_armv6l.whl#sha256=ee335c21f0c2ac2e6fe6e2db1a8cdd59489f004fdbdd9110493a3d7bac317336 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:30,985   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.3.0-cp311-cp311-linux_armv7l.whl#sha256=ee335c21f0c2ac2e6fe6e2db1a8cdd59489f004fdbdd9110493a3d7bac317336 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:30,985   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.3.0-cp39-cp39-linux_armv6l.whl#sha256=1a36a13deb03dfcb77acbd08dbf7c62e7086d68e727931ebac07299f74917278 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:30,986   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.3.0-cp39-cp39-linux_armv7l.whl#sha256=1a36a13deb03dfcb77acbd08dbf7c62e7086d68e727931ebac07299f74917278 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:30,987   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.9-cp39-cp39-linux_armv6l.whl#sha256=fe0681016b98f6009b5fe7b4a6e9c6041c66779f34fa97c85efb61af34a7da0b (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:30,988   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.9-cp39-cp39-linux_armv7l.whl#sha256=fe0681016b98f6009b5fe7b4a6e9c6041c66779f34fa97c85efb61af34a7da0b (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:30,988   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.9-cp313-cp313-linux_armv6l.whl#sha256=b4520b0586b9cc2731294a00f6af12038dda52c05040d26d754ebb779b64a50e (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:30,989   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.9-cp313-cp313-linux_armv7l.whl#sha256=b4520b0586b9cc2731294a00f6af12038dda52c05040d26d754ebb779b64a50e (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:30,990   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.8-cp311-cp311-linux_armv6l.whl#sha256=ee432a6579f1fd3fc588081bf929404c95dc1ec104d35700f9da36f7ee5078a7 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:30,991   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.8-cp311-cp311-linux_armv7l.whl#sha256=ee432a6579f1fd3fc588081bf929404c95dc1ec104d35700f9da36f7ee5078a7 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:30,992   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.8-cp37-cp37m-linux_armv6l.whl#sha256=2dad54fc21da140dd42f1aed2ee62c105009897b4a34c91d2f89f9595f0866e7 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:30,992   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.8-cp37-cp37m-linux_armv7l.whl#sha256=2dad54fc21da140dd42f1aed2ee62c105009897b4a34c91d2f89f9595f0866e7 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:30,993   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.8-cp39-cp39-linux_armv6l.whl#sha256=91085e513c89bf8d3d6e698af268ffcb3e7b08fdf9737b17f8e9c1f1f83dc708 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:30,994   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.8-cp39-cp39-linux_armv7l.whl#sha256=91085e513c89bf8d3d6e698af268ffcb3e7b08fdf9737b17f8e9c1f1f83dc708 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:30,994   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.8-cp313-cp313-linux_armv6l.whl#sha256=949636a2afd39184c8f627ad8d0c4cc8d06b648b0faa6d4a77fe23611a3d70be (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:30,995   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.8-cp313-cp313-linux_armv7l.whl#sha256=949636a2afd39184c8f627ad8d0c4cc8d06b648b0faa6d4a77fe23611a3d70be (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:30,996   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.7-cp311-cp311-linux_armv6l.whl#sha256=be2eff96a402b9d784fbe795b3ffff5ba8c149b8f780f362eeb902794cc56dab (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:30,997   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.7-cp311-cp311-linux_armv7l.whl#sha256=be2eff96a402b9d784fbe795b3ffff5ba8c149b8f780f362eeb902794cc56dab (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:30,997   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.7-cp37-cp37m-linux_armv6l.whl#sha256=3edb6b06140229d192e72146378b27e67c3211117690ca071ac7d04014e6e367 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:30,998   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.7-cp37-cp37m-linux_armv7l.whl#sha256=3edb6b06140229d192e72146378b27e67c3211117690ca071ac7d04014e6e367 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:30,999   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.7-cp39-cp39-linux_armv6l.whl#sha256=109478ef17f1cfa2e053a1865c6d523b1c0f142ee846d2f1b327bec7bd32c550 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,000   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.7-cp39-cp39-linux_armv7l.whl#sha256=109478ef17f1cfa2e053a1865c6d523b1c0f142ee846d2f1b327bec7bd32c550 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,000   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.6-cp311-cp311-linux_armv6l.whl#sha256=2e6e790cdb7a9961cdc23b59eb08e3be5b5cec16a299740bf31ed11c1f99d588 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,001   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.6-cp311-cp311-linux_armv7l.whl#sha256=2e6e790cdb7a9961cdc23b59eb08e3be5b5cec16a299740bf31ed11c1f99d588 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,002   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.6-cp37-cp37m-linux_armv6l.whl#sha256=8c342ebc4df96b4e7847f378fad7f412b85012b0ad45c0f072f3fd0f750a5167 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,003   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.6-cp37-cp37m-linux_armv7l.whl#sha256=8c342ebc4df96b4e7847f378fad7f412b85012b0ad45c0f072f3fd0f750a5167 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,004   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.6-cp39-cp39-linux_armv6l.whl#sha256=f57ae8939de5533395110329ff1c9707b9d3b88b4e37a974cb8f1d2d1c7f3f10 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,004   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.6-cp39-cp39-linux_armv7l.whl#sha256=f57ae8939de5533395110329ff1c9707b9d3b88b4e37a974cb8f1d2d1c7f3f10 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,005   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.5-cp311-cp311-linux_armv6l.whl#sha256=722db10933ea8fe132e2a1a28e4e296ab1e722f38a32d0088639c3fce026ff74 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,006   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.5-cp311-cp311-linux_armv7l.whl#sha256=722db10933ea8fe132e2a1a28e4e296ab1e722f38a32d0088639c3fce026ff74 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,006   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.5-cp37-cp37m-linux_armv6l.whl#sha256=af295fbb8044148cfdd4c43bb7dbe73b6b1e8fd4e2a167ee28ee5d8883bcf986 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,007   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.5-cp37-cp37m-linux_armv7l.whl#sha256=af295fbb8044148cfdd4c43bb7dbe73b6b1e8fd4e2a167ee28ee5d8883bcf986 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,008   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.5-cp39-cp39-linux_armv6l.whl#sha256=1bc04a508737f0d58899a64d071a1a96b30deed761a1e3fe01629f887fb9d5fc (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,009   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.5-cp39-cp39-linux_armv7l.whl#sha256=1bc04a508737f0d58899a64d071a1a96b30deed761a1e3fe01629f887fb9d5fc (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,009   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.3-cp311-cp311-linux_armv6l.whl#sha256=cc7472a20581c23d7a00b1692cea3fc0a2ecb8dbf8e578b9ab7dbb4701cb9af0 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,010   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.3-cp311-cp311-linux_armv7l.whl#sha256=cc7472a20581c23d7a00b1692cea3fc0a2ecb8dbf8e578b9ab7dbb4701cb9af0 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,011   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.3-cp37-cp37m-linux_armv6l.whl#sha256=32313431d1b6182a4d4b8c8e711fd436c3d3fcda71fa59e3e2b9d4910a0a88a6 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,011   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.3-cp37-cp37m-linux_armv7l.whl#sha256=32313431d1b6182a4d4b8c8e711fd436c3d3fcda71fa59e3e2b9d4910a0a88a6 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,012   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.3-cp39-cp39-linux_armv6l.whl#sha256=54c28aeaeafe285214b9a2178be151502a11de2b5c45205dffa54a5ab894ff63 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,013   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.3-cp39-cp39-linux_armv7l.whl#sha256=54c28aeaeafe285214b9a2178be151502a11de2b5c45205dffa54a5ab894ff63 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,014   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.1-cp37-cp37m-linux_armv6l.whl#sha256=62b6a1dac642a77187c5a163b17eefccf75b54ec85a4d6622363bb7814f1a565 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,014   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.1-cp37-cp37m-linux_armv7l.whl#sha256=62b6a1dac642a77187c5a163b17eefccf75b54ec85a4d6622363bb7814f1a565 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,015   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.1-cp39-cp39-linux_armv6l.whl#sha256=144a7a71ee8e0bf29c46cea279177232a94953f4771939ff86b411e2041a03a9 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,016   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.1-cp39-cp39-linux_armv7l.whl#sha256=144a7a71ee8e0bf29c46cea279177232a94953f4771939ff86b411e2041a03a9 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,016   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.1-cp311-cp311-linux_armv6l.whl#sha256=6ecaca9314ac09b750d05d10cdd652e3dd1ac2cc8f9936fccf0df1eb9dd29655 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,017   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.1-cp311-cp311-linux_armv7l.whl#sha256=6ecaca9314ac09b750d05d10cdd652e3dd1ac2cc8f9936fccf0df1eb9dd29655 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,018   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.0-cp39-cp39-linux_armv6l.whl#sha256=b554bf72c5b0bffe6c1e9a74088314014bb813c6d1d9b6578745e246a0d45687 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,018   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.0-cp39-cp39-linux_armv7l.whl#sha256=b554bf72c5b0bffe6c1e9a74088314014bb813c6d1d9b6578745e246a0d45687 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,019   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.0-cp37-cp37m-linux_armv6l.whl#sha256=9cb3556385c015ece339379fcda2d3dd46022b80c852672e839e31e0a308951e (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,020   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.2.0-cp37-cp37m-linux_armv7l.whl#sha256=9cb3556385c015ece339379fcda2d3dd46022b80c852672e839e31e0a308951e (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,020   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.1.1-cp37-cp37m-linux_armv6l.whl#sha256=f57da780847a57155b44aa2f7a6e328d345a0f30858083c6669c328b44f194a1 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,021   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.1.1-cp37-cp37m-linux_armv7l.whl#sha256=f57da780847a57155b44aa2f7a6e328d345a0f30858083c6669c328b44f194a1 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,022   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.1.1-cp39-cp39-linux_armv6l.whl#sha256=04ce4e8c36dacd8f0a727f6acb1cf990b425d3fcd6e1bc426bca2c316de0bcc8 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,023   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.1.1-cp39-cp39-linux_armv7l.whl#sha256=04ce4e8c36dacd8f0a727f6acb1cf990b425d3fcd6e1bc426bca2c316de0bcc8 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,024   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.1.0-cp37-cp37m-linux_armv6l.whl#sha256=fefc94e675065b00c116d2c61c64d178a20bee1079be65fa097b8f134fee5299 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,024   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.1.0-cp37-cp37m-linux_armv7l.whl#sha256=fefc94e675065b00c116d2c61c64d178a20bee1079be65fa097b8f134fee5299 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,025   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.1.0-cp39-cp39-linux_armv6l.whl#sha256=be8faf4c7b17f96a91c7104a7b5d093ce07c4e6ebd458f4501694a0a42c89881 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,026   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.1.0-cp39-cp39-linux_armv7l.whl#sha256=be8faf4c7b17f96a91c7104a7b5d093ce07c4e6ebd458f4501694a0a42c89881 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,026   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.0.9-cp37-cp37m-linux_armv6l.whl#sha256=be124f7f80c27462ab252101b8748b4825aa2718172dd154380e23d7f2dcb954 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,027   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.0.9-cp37-cp37m-linux_armv7l.whl#sha256=be124f7f80c27462ab252101b8748b4825aa2718172dd154380e23d7f2dcb954 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,027   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.0.9-cp39-cp39-linux_armv6l.whl#sha256=0b05bf968d17d6ee92be8bf21cf3991df7cb3b3d685fee09049dedb2f9d5ee7c (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,028   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.0.9-cp39-cp39-linux_armv7l.whl#sha256=0b05bf968d17d6ee92be8bf21cf3991df7cb3b3d685fee09049dedb2f9d5ee7c (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,029   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.0.8-cp37-cp37m-linux_armv6l.whl#sha256=ad3883b734204bdb7f690aa520d991f61667159590a41a71870dda41d888085d (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,030   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.0.8-cp37-cp37m-linux_armv7l.whl#sha256=ad3883b734204bdb7f690aa520d991f61667159590a41a71870dda41d888085d (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,030   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.0.8-cp39-cp39-linux_armv6l.whl#sha256=16889f2c9c5397540b9fa3bfa0396accff8dce33315140eb793f9bedb013c4ad (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,031   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.0.8-cp39-cp39-linux_armv7l.whl#sha256=16889f2c9c5397540b9fa3bfa0396accff8dce33315140eb793f9bedb013c4ad (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,032   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.0.7-cp37-cp37m-linux_armv6l.whl#sha256=b3374922018f96941d783f8fbd1419523636af0939729833084abfcbc2857815 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,032   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.0.7-cp37-cp37m-linux_armv7l.whl#sha256=b3374922018f96941d783f8fbd1419523636af0939729833084abfcbc2857815 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,033   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.0.7-cp39-cp39-linux_armv6l.whl#sha256=58efd8944f51edd73913001082ed31919eaa2a61cd84bab7f9b3d6dc4bb5147c (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,034   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.0.7-cp39-cp39-linux_armv7l.whl#sha256=58efd8944f51edd73913001082ed31919eaa2a61cd84bab7f9b3d6dc4bb5147c (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,034   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.0.6-cp37-cp37m-linux_armv6l.whl#sha256=c2c24578a8c96d074c91314ee034316b005ad82fe94da2f2135b6cca4237b374 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,035   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.0.6-cp37-cp37m-linux_armv7l.whl#sha256=c2c24578a8c96d074c91314ee034316b005ad82fe94da2f2135b6cca4237b374 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,036   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.0.6-cp39-cp39-linux_armv6l.whl#sha256=3ca3fc7f0e19a74789369a1ab6ee666b4658db1d6547739760037140b35b7e3e (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,036   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.0.6-cp39-cp39-linux_armv7l.whl#sha256=3ca3fc7f0e19a74789369a1ab6ee666b4658db1d6547739760037140b35b7e3e (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,037   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.0.4-cp37-cp37m-linux_armv6l.whl#sha256=1e5895fe1aa6a3e6127f180defd7a420edf6f8b5f4f1b689995f9758b7286846 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,037   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.0.4-cp37-cp37m-linux_armv7l.whl#sha256=1e5895fe1aa6a3e6127f180defd7a420edf6f8b5f4f1b689995f9758b7286846 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,038   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.0.4-cp39-cp39-linux_armv6l.whl#sha256=50c81a26e08771be990869c49acd65b172ef531d807be2ef54cc44de12463f76 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,039   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.0.4-cp39-cp39-linux_armv7l.whl#sha256=50c81a26e08771be990869c49acd65b172ef531d807be2ef54cc44de12463f76 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,040   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.0.3-cp37-cp37m-linux_armv6l.whl#sha256=68c34ca6656477c1de6691804d909876e1f42817256079672904805fc0971aca (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,041   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.0.3-cp37-cp37m-linux_armv7l.whl#sha256=68c34ca6656477c1de6691804d909876e1f42817256079672904805fc0971aca (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,041   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.0.3-cp39-cp39-linux_armv6l.whl#sha256=3d07a856b5dfd6012a973e73b174a6b8d70ae723b22a5396f9e1323a3396a327 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,042   Skipping link: No binaries permitted for pybiotk: https://archive1.piwheels.org/simple/pybiotk/pybiotk-1.0.3-cp39-cp39-linux_armv7l.whl#sha256=3d07a856b5dfd6012a973e73b174a6b8d70ae723b22a5396f9e1323a3396a327 (from https://www.piwheels.org/simple/pybiotk/)
2025-12-09T10:13:31,043 Skipping link: not a file: https://www.piwheels.org/simple/pybiotk/
2025-12-09T10:13:31,044 Skipping link: not a file: https://pypi.org/simple/pybiotk/
2025-12-09T10:13:31,071 Given no hashes to check 1 links for project 'pybiotk': discarding no candidates
2025-12-09T10:13:31,088 Collecting pybiotk==1.3.3
2025-12-09T10:13:31,090   Created temporary directory: /tmp/pip-unpack-eltmuxeg
2025-12-09T10:13:31,301   Downloading pybiotk-1.3.3.tar.gz (111 kB)
2025-12-09T10:13:31,601   Added pybiotk==1.3.3 from https://files.pythonhosted.org/packages/d2/a0/274b0500ae874503a7b9af29732976cd3e4fddf97f40cf2135b58c26e7ed/pybiotk-1.3.3.tar.gz to build tracker '/tmp/pip-build-tracker-tztap4qg'
2025-12-09T10:13:31,608   Created temporary directory: /tmp/pip-build-env-eo7m0v_x
2025-12-09T10:13:31,612   Installing build dependencies: started
2025-12-09T10:13:31,613   Running command pip subprocess to install build dependencies
2025-12-09T10:13:32,788   Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11)
2025-12-09T10:13:33,447   DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2025-12-09T10:13:33,470   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2025-12-09T10:13:35,223   Collecting setuptools>=46.1.0
2025-12-09T10:13:35,320     Using cached https://www.piwheels.org/simple/setuptools/setuptools-80.9.0-py3-none-any.whl (1.2 MB)
2025-12-09T10:13:35,868   Collecting setuptools_scm[toml]>=5
2025-12-09T10:13:35,884     Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-9.2.2-py3-none-any.whl (62 kB)
2025-12-09T10:13:36,106   Collecting wheel
2025-12-09T10:13:36,122     Using cached https://www.piwheels.org/simple/wheel/wheel-0.45.1-py3-none-any.whl (72 kB)
2025-12-09T10:13:38,071   Collecting Cython
2025-12-09T10:13:38,115     Using cached cython-3.2.2-cp39-abi3-manylinux2014_armv7l.manylinux_2_17_armv7l.manylinux_2_31_armv7l.whl (2.9 MB)
2025-12-09T10:13:38,383   Collecting packaging>=20
2025-12-09T10:13:38,397     Using cached https://www.piwheels.org/simple/packaging/packaging-25.0-py3-none-any.whl (66 kB)
2025-12-09T10:13:41,343   Installing collected packages: wheel, setuptools, packaging, Cython, setuptools_scm
2025-12-09T10:13:41,576     Creating /tmp/pip-build-env-eo7m0v_x/overlay/local/bin
2025-12-09T10:13:41,578     changing mode of /tmp/pip-build-env-eo7m0v_x/overlay/local/bin/wheel to 755
2025-12-09T10:13:48,409     changing mode of /tmp/pip-build-env-eo7m0v_x/overlay/local/bin/cygdb to 755
2025-12-09T10:13:48,411     changing mode of /tmp/pip-build-env-eo7m0v_x/overlay/local/bin/cython to 755
2025-12-09T10:13:48,413     changing mode of /tmp/pip-build-env-eo7m0v_x/overlay/local/bin/cythonize to 755
2025-12-09T10:13:48,677     changing mode of /tmp/pip-build-env-eo7m0v_x/overlay/local/bin/setuptools-scm to 755
2025-12-09T10:13:48,716   Successfully installed Cython-3.2.2 packaging-25.0 setuptools-80.9.0 setuptools_scm-9.2.2 wheel-0.45.1
2025-12-09T10:13:49,095   Installing build dependencies: finished with status 'done'
2025-12-09T10:13:49,101   Getting requirements to build wheel: started
2025-12-09T10:13:49,102   Running command Getting requirements to build wheel
2025-12-09T10:13:52,971   Compiling src/bx/bitset.pyx because it changed.
2025-12-09T10:13:52,972   Compiling src/bx/cluster.pyx because it changed.
2025-12-09T10:13:52,972   Compiling src/bx/intersection.pyx because it changed.
2025-12-09T10:13:52,973   [1/3] Cythonizing src/bx/bitset.pyx
2025-12-09T10:13:52,973   [2/3] Cythonizing src/bx/cluster.pyx
2025-12-09T10:13:52,974   [3/3] Cythonizing src/bx/intersection.pyx
2025-12-09T10:13:53,077   /tmp/pip-build-env-eo7m0v_x/overlay/local/lib/python3.11/dist-packages/setuptools_scm/_integration/version_inference.py:51: UserWarning: version of pybiotk already set
2025-12-09T10:13:53,078     warnings.warn(self.message)
2025-12-09T10:13:53,248   running egg_info
2025-12-09T10:13:53,257   writing src/pybiotk.egg-info/PKG-INFO
2025-12-09T10:13:53,261   writing dependency_links to src/pybiotk.egg-info/dependency_links.txt
2025-12-09T10:13:53,264   writing entry points to src/pybiotk.egg-info/entry_points.txt
2025-12-09T10:13:53,266   writing requirements to src/pybiotk.egg-info/requires.txt
2025-12-09T10:13:53,268   writing top-level names to src/pybiotk.egg-info/top_level.txt
2025-12-09T10:13:53,369   listing git files failed - pretending there aren't any
2025-12-09T10:13:53,376   reading manifest file 'src/pybiotk.egg-info/SOURCES.txt'
2025-12-09T10:13:53,386   adding license file 'LICENSE.txt'
2025-12-09T10:13:53,393   writing manifest file 'src/pybiotk.egg-info/SOURCES.txt'
2025-12-09T10:13:53,698   Getting requirements to build wheel: finished with status 'done'
2025-12-09T10:13:53,702   Created temporary directory: /tmp/pip-modern-metadata-st_brqf_
2025-12-09T10:13:53,704   Preparing metadata (pyproject.toml): started
2025-12-09T10:13:53,705   Running command Preparing metadata (pyproject.toml)
2025-12-09T10:13:54,977   /tmp/pip-build-env-eo7m0v_x/overlay/local/lib/python3.11/dist-packages/setuptools_scm/_integration/version_inference.py:51: UserWarning: version of pybiotk already set
2025-12-09T10:13:54,977     warnings.warn(self.message)
2025-12-09T10:13:55,028   running dist_info
2025-12-09T10:13:55,045   creating /tmp/pip-modern-metadata-st_brqf_/pybiotk.egg-info
2025-12-09T10:13:55,046   writing /tmp/pip-modern-metadata-st_brqf_/pybiotk.egg-info/PKG-INFO
2025-12-09T10:13:55,051   writing dependency_links to /tmp/pip-modern-metadata-st_brqf_/pybiotk.egg-info/dependency_links.txt
2025-12-09T10:13:55,054   writing entry points to /tmp/pip-modern-metadata-st_brqf_/pybiotk.egg-info/entry_points.txt
2025-12-09T10:13:55,056   writing requirements to /tmp/pip-modern-metadata-st_brqf_/pybiotk.egg-info/requires.txt
2025-12-09T10:13:55,057   writing top-level names to /tmp/pip-modern-metadata-st_brqf_/pybiotk.egg-info/top_level.txt
2025-12-09T10:13:55,058   writing manifest file '/tmp/pip-modern-metadata-st_brqf_/pybiotk.egg-info/SOURCES.txt'
2025-12-09T10:13:55,151   listing git files failed - pretending there aren't any
2025-12-09T10:13:55,158   reading manifest file '/tmp/pip-modern-metadata-st_brqf_/pybiotk.egg-info/SOURCES.txt'
2025-12-09T10:13:55,161   adding license file 'LICENSE.txt'
2025-12-09T10:13:55,166   writing manifest file '/tmp/pip-modern-metadata-st_brqf_/pybiotk.egg-info/SOURCES.txt'
2025-12-09T10:13:55,167   creating '/tmp/pip-modern-metadata-st_brqf_/pybiotk-1.3.3.dist-info'
2025-12-09T10:13:55,363   Preparing metadata (pyproject.toml): finished with status 'done'
2025-12-09T10:13:55,368   Source in /tmp/pip-wheel-88ylg09l/pybiotk_625d0bffbd9d48f686c9d3bff9137201 has version 1.3.3, which satisfies requirement pybiotk==1.3.3 from https://files.pythonhosted.org/packages/d2/a0/274b0500ae874503a7b9af29732976cd3e4fddf97f40cf2135b58c26e7ed/pybiotk-1.3.3.tar.gz
2025-12-09T10:13:55,369   Removed pybiotk==1.3.3 from https://files.pythonhosted.org/packages/d2/a0/274b0500ae874503a7b9af29732976cd3e4fddf97f40cf2135b58c26e7ed/pybiotk-1.3.3.tar.gz from build tracker '/tmp/pip-build-tracker-tztap4qg'
2025-12-09T10:13:55,373 Created temporary directory: /tmp/pip-unpack-6losrt4n
2025-12-09T10:13:55,374 Building wheels for collected packages: pybiotk
2025-12-09T10:13:55,378   Created temporary directory: /tmp/pip-wheel-hf70deem
2025-12-09T10:13:55,378   Destination directory: /tmp/pip-wheel-hf70deem
2025-12-09T10:13:55,380   Building wheel for pybiotk (pyproject.toml): started
2025-12-09T10:13:55,381   Running command Building wheel for pybiotk (pyproject.toml)
2025-12-09T10:13:56,624   /tmp/pip-build-env-eo7m0v_x/overlay/local/lib/python3.11/dist-packages/setuptools_scm/_integration/version_inference.py:51: UserWarning: version of pybiotk already set
2025-12-09T10:13:56,625     warnings.warn(self.message)
2025-12-09T10:13:56,676   running bdist_wheel
2025-12-09T10:13:56,715   running build
2025-12-09T10:13:56,716   running build_py
2025-12-09T10:13:56,727   creating build/lib.linux-armv7l-cpython-311/pybiotk
2025-12-09T10:13:56,729   copying src/pybiotk/__init__.py -> build/lib.linux-armv7l-cpython-311/pybiotk
2025-12-09T10:13:56,731   creating build/lib.linux-armv7l-cpython-311/stream
2025-12-09T10:13:56,732   copying src/stream/__init__.py -> build/lib.linux-armv7l-cpython-311/stream
2025-12-09T10:13:56,734   copying src/stream/pipe.py -> build/lib.linux-armv7l-cpython-311/stream
2025-12-09T10:13:56,737   copying src/stream/stream.py -> build/lib.linux-armv7l-cpython-311/stream
2025-12-09T10:13:56,740   creating build/lib.linux-armv7l-cpython-311/pybiotk/intervals
2025-12-09T10:13:56,741   copying src/pybiotk/intervals/merge_bed3.py -> build/lib.linux-armv7l-cpython-311/pybiotk/intervals
2025-12-09T10:13:56,743   copying src/pybiotk/intervals/merge_intervals.py -> build/lib.linux-armv7l-cpython-311/pybiotk/intervals
2025-12-09T10:13:56,745   copying src/pybiotk/intervals/__init__.py -> build/lib.linux-armv7l-cpython-311/pybiotk/intervals
2025-12-09T10:13:56,747   copying src/pybiotk/intervals/grange.py -> build/lib.linux-armv7l-cpython-311/pybiotk/intervals
2025-12-09T10:13:56,750   creating build/lib.linux-armv7l-cpython-311/pybiotk/data
2025-12-09T10:13:56,751   copying src/pybiotk/data/__init__.py -> build/lib.linux-armv7l-cpython-311/pybiotk/data
2025-12-09T10:13:56,753   creating build/lib.linux-armv7l-cpython-311/pybiotk/string
2025-12-09T10:13:56,754   copying src/pybiotk/string/sequence.py -> build/lib.linux-armv7l-cpython-311/pybiotk/string
2025-12-09T10:13:56,756   copying src/pybiotk/string/motif.py -> build/lib.linux-armv7l-cpython-311/pybiotk/string
2025-12-09T10:13:56,758   copying src/pybiotk/string/__init__.py -> build/lib.linux-armv7l-cpython-311/pybiotk/string
2025-12-09T10:13:56,761   creating build/lib.linux-armv7l-cpython-311/pybiotk/meta
2025-12-09T10:13:56,762   copying src/pybiotk/meta/metaplot.py -> build/lib.linux-armv7l-cpython-311/pybiotk/meta
2025-12-09T10:13:56,765   copying src/pybiotk/meta/merge_transcript.py -> build/lib.linux-armv7l-cpython-311/pybiotk/meta
2025-12-09T10:13:56,767   copying src/pybiotk/meta/__init__.py -> build/lib.linux-armv7l-cpython-311/pybiotk/meta
2025-12-09T10:13:56,768   copying src/pybiotk/meta/task.py -> build/lib.linux-armv7l-cpython-311/pybiotk/meta
2025-12-09T10:13:56,771   creating build/lib.linux-armv7l-cpython-311/pybiotk/io
2025-12-09T10:13:56,772   copying src/pybiotk/io/bed.py -> build/lib.linux-armv7l-cpython-311/pybiotk/io
2025-12-09T10:13:56,775   copying src/pybiotk/io/bam.py -> build/lib.linux-armv7l-cpython-311/pybiotk/io
2025-12-09T10:13:56,777   copying src/pybiotk/io/gtf.py -> build/lib.linux-armv7l-cpython-311/pybiotk/io
2025-12-09T10:13:56,780   copying src/pybiotk/io/bw.py -> build/lib.linux-armv7l-cpython-311/pybiotk/io
2025-12-09T10:13:56,783   copying src/pybiotk/io/__init__.py -> build/lib.linux-armv7l-cpython-311/pybiotk/io
2025-12-09T10:13:56,785   copying src/pybiotk/io/fastq.py -> build/lib.linux-armv7l-cpython-311/pybiotk/io
2025-12-09T10:13:56,787   copying src/pybiotk/io/fasta.py -> build/lib.linux-armv7l-cpython-311/pybiotk/io
2025-12-09T10:13:56,791   creating build/lib.linux-armv7l-cpython-311/pybiotk/utils
2025-12-09T10:13:56,792   copying src/pybiotk/utils/utils.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2025-12-09T10:13:56,794   copying src/pybiotk/utils/seq_random.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2025-12-09T10:13:56,796   copying src/pybiotk/utils/subseq_analysis.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2025-12-09T10:13:56,799   copying src/pybiotk/utils/infer_experiment.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2025-12-09T10:13:56,801   copying src/pybiotk/utils/merge_subseq.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2025-12-09T10:13:56,803   copying src/pybiotk/utils/bam_random.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2025-12-09T10:13:56,805   copying src/pybiotk/utils/fastq_uniq.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2025-12-09T10:13:56,807   copying src/pybiotk/utils/ercc_parser.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2025-12-09T10:13:56,809   copying src/pybiotk/utils/rmats_filter.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2025-12-09T10:13:56,811   copying src/pybiotk/utils/merge_row.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2025-12-09T10:13:56,813   copying src/pybiotk/utils/fasta_filter.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2025-12-09T10:13:56,815   copying src/pybiotk/utils/fastq_join.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2025-12-09T10:13:56,818   copying src/pybiotk/utils/__init__.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2025-12-09T10:13:56,819   copying src/pybiotk/utils/fragment_size.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2025-12-09T10:13:56,822   copying src/pybiotk/utils/reference_count.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2025-12-09T10:13:56,824   copying src/pybiotk/utils/normalize.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2025-12-09T10:13:56,826   copying src/pybiotk/utils/read_tables.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2025-12-09T10:13:56,828   copying src/pybiotk/utils/genomefetcher.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2025-12-09T10:13:56,830   copying src/pybiotk/utils/bigwigfetcher.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2025-12-09T10:13:56,832   copying src/pybiotk/utils/summary_log.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2025-12-09T10:13:56,835   copying src/pybiotk/utils/pyanno.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2025-12-09T10:13:56,837   copying src/pybiotk/utils/fastx_rename.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2025-12-09T10:13:56,839   copying src/pybiotk/utils/gtf_filter.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2025-12-09T10:13:56,841   copying src/pybiotk/utils/reverse_fastx.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2025-12-09T10:13:56,844   creating build/lib.linux-armv7l-cpython-311/pybiotk/convert
2025-12-09T10:13:56,845   copying src/pybiotk/convert/bampe_order_by_name.py -> build/lib.linux-armv7l-cpython-311/pybiotk/convert
2025-12-09T10:13:56,847   copying src/pybiotk/convert/fa2fastq.py -> build/lib.linux-armv7l-cpython-311/pybiotk/convert
2025-12-09T10:13:56,849   copying src/pybiotk/convert/__init__.py -> build/lib.linux-armv7l-cpython-311/pybiotk/convert
2025-12-09T10:13:56,850   copying src/pybiotk/convert/bed2bedgraph.py -> build/lib.linux-armv7l-cpython-311/pybiotk/convert
2025-12-09T10:13:56,852   copying src/pybiotk/convert/gtf2bed.py -> build/lib.linux-armv7l-cpython-311/pybiotk/convert
2025-12-09T10:13:56,855   copying src/pybiotk/convert/fq2fasta.py -> build/lib.linux-armv7l-cpython-311/pybiotk/convert
2025-12-09T10:13:56,857   copying src/pybiotk/convert/bam2fastx.py -> build/lib.linux-armv7l-cpython-311/pybiotk/convert
2025-12-09T10:13:56,859   creating build/lib.linux-armv7l-cpython-311/pybiotk/annodb
2025-12-09T10:13:56,860   copying src/pybiotk/annodb/anno.py -> build/lib.linux-armv7l-cpython-311/pybiotk/annodb
2025-12-09T10:13:56,863   copying src/pybiotk/annodb/__init__.py -> build/lib.linux-armv7l-cpython-311/pybiotk/annodb
2025-12-09T10:13:56,865   copying src/pybiotk/annodb/gene.py -> build/lib.linux-armv7l-cpython-311/pybiotk/annodb
2025-12-09T10:13:56,867   copying src/pybiotk/annodb/transcript.py -> build/lib.linux-armv7l-cpython-311/pybiotk/annodb
2025-12-09T10:13:56,870   copying src/pybiotk/annodb/merged_transcript.py -> build/lib.linux-armv7l-cpython-311/pybiotk/annodb
2025-12-09T10:13:56,872   running egg_info
2025-12-09T10:13:56,888   writing src/pybiotk.egg-info/PKG-INFO
2025-12-09T10:13:56,893   writing dependency_links to src/pybiotk.egg-info/dependency_links.txt
2025-12-09T10:13:56,895   writing entry points to src/pybiotk.egg-info/entry_points.txt
2025-12-09T10:13:56,897   writing requirements to src/pybiotk.egg-info/requires.txt
2025-12-09T10:13:56,898   writing top-level names to src/pybiotk.egg-info/top_level.txt
2025-12-09T10:13:56,947   listing git files failed - pretending there aren't any
2025-12-09T10:13:56,954   reading manifest file 'src/pybiotk.egg-info/SOURCES.txt'
2025-12-09T10:13:56,961   adding license file 'LICENSE.txt'
2025-12-09T10:13:56,968   writing manifest file 'src/pybiotk.egg-info/SOURCES.txt'
2025-12-09T10:13:56,976   copying src/pybiotk/data/hg38.chrom.sizes -> build/lib.linux-armv7l-cpython-311/pybiotk/data
2025-12-09T10:13:56,979   copying src/pybiotk/data/mm10.chrom.sizes -> build/lib.linux-armv7l-cpython-311/pybiotk/data
2025-12-09T10:13:56,985   running build_ext
2025-12-09T10:13:56,993   building 'pybiotk.bx.bitset' extension
2025-12-09T10:13:56,994   creating build/temp.linux-armv7l-cpython-311/build/src/bx
2025-12-09T10:13:56,996   creating build/temp.linux-armv7l-cpython-311/src/bx
2025-12-09T10:13:56,998   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/bx -I/usr/include/python3.11 -c build/src/bx/bitset.c -o build/temp.linux-armv7l-cpython-311/build/src/bx/bitset.o -std=c99
2025-12-09T10:14:08,066   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/bx -I/usr/include/python3.11 -c src/bx/binBits.c -o build/temp.linux-armv7l-cpython-311/src/bx/binBits.o -std=c99
2025-12-09T10:14:08,489   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/bx -I/usr/include/python3.11 -c src/bx/bits.c -o build/temp.linux-armv7l-cpython-311/src/bx/bits.o -std=c99
2025-12-09T10:14:08,930   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/bx -I/usr/include/python3.11 -c src/bx/common.c -o build/temp.linux-armv7l-cpython-311/src/bx/common.o -std=c99
2025-12-09T10:14:09,095   creating build/lib.linux-armv7l-cpython-311/pybiotk/bx
2025-12-09T10:14:09,096   arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/build/src/bx/bitset.o build/temp.linux-armv7l-cpython-311/src/bx/binBits.o build/temp.linux-armv7l-cpython-311/src/bx/bits.o build/temp.linux-armv7l-cpython-311/src/bx/common.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/pybiotk/bx/bitset.cpython-311-arm-linux-gnueabihf.so
2025-12-09T10:14:09,233   building 'pybiotk.bx.cluster' extension
2025-12-09T10:14:09,234   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/bx -I/usr/include/python3.11 -c build/src/bx/cluster.c -o build/temp.linux-armv7l-cpython-311/build/src/bx/cluster.o -std=c99
2025-12-09T10:14:13,376   arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/build/src/bx/cluster.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/pybiotk/bx/cluster.cpython-311-arm-linux-gnueabihf.so
2025-12-09T10:14:13,481   building 'pybiotk.bx.intersection' extension
2025-12-09T10:14:13,482   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.11 -c build/src/bx/intersection.c -o build/temp.linux-armv7l-cpython-311/build/src/bx/intersection.o -std=c99
2025-12-09T10:14:26,521   arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/build/src/bx/intersection.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/pybiotk/bx/intersection.cpython-311-arm-linux-gnueabihf.so
2025-12-09T10:14:26,852   running build_scripts
2025-12-09T10:14:26,855   creating build/scripts-3.11
2025-12-09T10:14:26,860   copying rscripts/plot_FRiPs.R -> build/scripts-3.11
2025-12-09T10:14:26,870   copying rscripts/plot_corr.R -> build/scripts-3.11
2025-12-09T10:14:26,878   copying rscripts/plot_peak_width.R -> build/scripts-3.11
2025-12-09T10:14:26,887   copying rscripts/plot_bar.R -> build/scripts-3.11
2025-12-09T10:14:26,895   copying rscripts/diff_expr_plot.R -> build/scripts-3.11
2025-12-09T10:14:26,905   copying rscripts/diff_expr_DESeq2.R -> build/scripts-3.11
2025-12-09T10:14:26,915   copying rscripts/plot_venn.R -> build/scripts-3.11
2025-12-09T10:14:26,924   copying rscripts/plot_deeptools_fragmentsize.R -> build/scripts-3.11
2025-12-09T10:14:26,933   copying rscripts/plot_rep_cor.R -> build/scripts-3.11
2025-12-09T10:14:26,943   copying rscripts/plot_chip_summary.R -> build/scripts-3.11
2025-12-09T10:14:26,953   copying rscripts/peak_anno.R -> build/scripts-3.11
2025-12-09T10:14:26,964   copying rscripts/plot_hist.R -> build/scripts-3.11
2025-12-09T10:14:26,975   copying rscripts/diff_expr_edgeR.R -> build/scripts-3.11
2025-12-09T10:14:26,978   copying scripts/fasta_u2t.sh -> build/scripts-3.11
2025-12-09T10:14:26,980   copying scripts/get_chrom_length.sh -> build/scripts-3.11
2025-12-09T10:14:26,982   copying scripts/fastq_len.sh -> build/scripts-3.11
2025-12-09T10:14:26,984   copying scripts/gtfparser.sh -> build/scripts-3.11
2025-12-09T10:14:26,986   copying scripts/remove_duplicates.sh -> build/scripts-3.11
2025-12-09T10:14:26,988   copying scripts/fasta_len.sh -> build/scripts-3.11
2025-12-09T10:14:26,990   copying scripts/merge_subseq.sh -> build/scripts-3.11
2025-12-09T10:14:26,991   changing mode of build/scripts-3.11/plot_FRiPs.R from 644 to 755
2025-12-09T10:14:26,992   changing mode of build/scripts-3.11/plot_corr.R from 644 to 755
2025-12-09T10:14:26,992   changing mode of build/scripts-3.11/plot_peak_width.R from 644 to 755
2025-12-09T10:14:26,993   changing mode of build/scripts-3.11/plot_bar.R from 644 to 755
2025-12-09T10:14:26,993   changing mode of build/scripts-3.11/diff_expr_plot.R from 644 to 755
2025-12-09T10:14:26,994   changing mode of build/scripts-3.11/diff_expr_DESeq2.R from 644 to 755
2025-12-09T10:14:26,994   changing mode of build/scripts-3.11/plot_venn.R from 644 to 755
2025-12-09T10:14:26,995   changing mode of build/scripts-3.11/plot_deeptools_fragmentsize.R from 644 to 755
2025-12-09T10:14:26,995   changing mode of build/scripts-3.11/plot_rep_cor.R from 644 to 755
2025-12-09T10:14:26,996   changing mode of build/scripts-3.11/plot_chip_summary.R from 644 to 755
2025-12-09T10:14:26,996   changing mode of build/scripts-3.11/peak_anno.R from 644 to 755
2025-12-09T10:14:26,997   changing mode of build/scripts-3.11/plot_hist.R from 644 to 755
2025-12-09T10:14:26,997   changing mode of build/scripts-3.11/diff_expr_edgeR.R from 644 to 755
2025-12-09T10:14:26,998   changing mode of build/scripts-3.11/fasta_u2t.sh from 644 to 755
2025-12-09T10:14:26,998   changing mode of build/scripts-3.11/get_chrom_length.sh from 644 to 755
2025-12-09T10:14:26,999   changing mode of build/scripts-3.11/fastq_len.sh from 644 to 755
2025-12-09T10:14:26,999   changing mode of build/scripts-3.11/gtfparser.sh from 644 to 755
2025-12-09T10:14:27,000   changing mode of build/scripts-3.11/remove_duplicates.sh from 644 to 755
2025-12-09T10:14:27,000   changing mode of build/scripts-3.11/fasta_len.sh from 644 to 755
2025-12-09T10:14:27,001   changing mode of build/scripts-3.11/merge_subseq.sh from 644 to 755
2025-12-09T10:14:27,032   installing to build/bdist.linux-armv7l/wheel
2025-12-09T10:14:27,033   running install
2025-12-09T10:14:27,056   running install_lib
2025-12-09T10:14:27,069   creating build/bdist.linux-armv7l/wheel
2025-12-09T10:14:27,073   creating build/bdist.linux-armv7l/wheel/pybiotk
2025-12-09T10:14:27,077   creating build/bdist.linux-armv7l/wheel/pybiotk/intervals
2025-12-09T10:14:27,081   copying build/lib.linux-armv7l-cpython-311/pybiotk/intervals/merge_bed3.py -> build/bdist.linux-armv7l/wheel/./pybiotk/intervals
2025-12-09T10:14:27,088   copying build/lib.linux-armv7l-cpython-311/pybiotk/intervals/merge_intervals.py -> build/bdist.linux-armv7l/wheel/./pybiotk/intervals
2025-12-09T10:14:27,094   copying build/lib.linux-armv7l-cpython-311/pybiotk/intervals/__init__.py -> build/bdist.linux-armv7l/wheel/./pybiotk/intervals
2025-12-09T10:14:27,100   copying build/lib.linux-armv7l-cpython-311/pybiotk/intervals/grange.py -> build/bdist.linux-armv7l/wheel/./pybiotk/intervals
2025-12-09T10:14:27,109   creating build/bdist.linux-armv7l/wheel/pybiotk/data
2025-12-09T10:14:27,112   copying build/lib.linux-armv7l-cpython-311/pybiotk/data/mm10.chrom.sizes -> build/bdist.linux-armv7l/wheel/./pybiotk/data
2025-12-09T10:14:27,118   copying build/lib.linux-armv7l-cpython-311/pybiotk/data/__init__.py -> build/bdist.linux-armv7l/wheel/./pybiotk/data
2025-12-09T10:14:27,124   copying build/lib.linux-armv7l-cpython-311/pybiotk/data/hg38.chrom.sizes -> build/bdist.linux-armv7l/wheel/./pybiotk/data
2025-12-09T10:14:27,134   creating build/bdist.linux-armv7l/wheel/pybiotk/string
2025-12-09T10:14:27,137   copying build/lib.linux-armv7l-cpython-311/pybiotk/string/sequence.py -> build/bdist.linux-armv7l/wheel/./pybiotk/string
2025-12-09T10:14:27,145   copying build/lib.linux-armv7l-cpython-311/pybiotk/string/motif.py -> build/bdist.linux-armv7l/wheel/./pybiotk/string
2025-12-09T10:14:27,152   copying build/lib.linux-armv7l-cpython-311/pybiotk/string/__init__.py -> build/bdist.linux-armv7l/wheel/./pybiotk/string
2025-12-09T10:14:27,159   copying build/lib.linux-armv7l-cpython-311/pybiotk/__init__.py -> build/bdist.linux-armv7l/wheel/./pybiotk
2025-12-09T10:14:27,167   creating build/bdist.linux-armv7l/wheel/pybiotk/meta
2025-12-09T10:14:27,170   copying build/lib.linux-armv7l-cpython-311/pybiotk/meta/metaplot.py -> build/bdist.linux-armv7l/wheel/./pybiotk/meta
2025-12-09T10:14:27,394   copying build/lib.linux-armv7l-cpython-311/pybiotk/meta/merge_transcript.py -> build/bdist.linux-armv7l/wheel/./pybiotk/meta
2025-12-09T10:14:27,399   copying build/lib.linux-armv7l-cpython-311/pybiotk/meta/__init__.py -> build/bdist.linux-armv7l/wheel/./pybiotk/meta
2025-12-09T10:14:27,401   copying build/lib.linux-armv7l-cpython-311/pybiotk/meta/task.py -> build/bdist.linux-armv7l/wheel/./pybiotk/meta
2025-12-09T10:14:27,404   creating build/bdist.linux-armv7l/wheel/pybiotk/io
2025-12-09T10:14:27,405   copying build/lib.linux-armv7l-cpython-311/pybiotk/io/bed.py -> build/bdist.linux-armv7l/wheel/./pybiotk/io
2025-12-09T10:14:27,407   copying build/lib.linux-armv7l-cpython-311/pybiotk/io/bam.py -> build/bdist.linux-armv7l/wheel/./pybiotk/io
2025-12-09T10:14:27,410   copying build/lib.linux-armv7l-cpython-311/pybiotk/io/gtf.py -> build/bdist.linux-armv7l/wheel/./pybiotk/io
2025-12-09T10:14:27,412   copying build/lib.linux-armv7l-cpython-311/pybiotk/io/bw.py -> build/bdist.linux-armv7l/wheel/./pybiotk/io
2025-12-09T10:14:27,414   copying build/lib.linux-armv7l-cpython-311/pybiotk/io/__init__.py -> build/bdist.linux-armv7l/wheel/./pybiotk/io
2025-12-09T10:14:27,416   copying build/lib.linux-armv7l-cpython-311/pybiotk/io/fastq.py -> build/bdist.linux-armv7l/wheel/./pybiotk/io
2025-12-09T10:14:27,418   copying build/lib.linux-armv7l-cpython-311/pybiotk/io/fasta.py -> build/bdist.linux-armv7l/wheel/./pybiotk/io
2025-12-09T10:14:27,421   creating build/bdist.linux-armv7l/wheel/pybiotk/utils
2025-12-09T10:14:27,422   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/utils.py -> build/bdist.linux-armv7l/wheel/./pybiotk/utils
2025-12-09T10:14:27,425   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/seq_random.py -> build/bdist.linux-armv7l/wheel/./pybiotk/utils
2025-12-09T10:14:27,427   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/subseq_analysis.py -> build/bdist.linux-armv7l/wheel/./pybiotk/utils
2025-12-09T10:14:27,429   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/infer_experiment.py -> build/bdist.linux-armv7l/wheel/./pybiotk/utils
2025-12-09T10:14:27,431   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/merge_subseq.py -> build/bdist.linux-armv7l/wheel/./pybiotk/utils
2025-12-09T10:14:27,433   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/bam_random.py -> build/bdist.linux-armv7l/wheel/./pybiotk/utils
2025-12-09T10:14:27,435   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/fastq_uniq.py -> build/bdist.linux-armv7l/wheel/./pybiotk/utils
2025-12-09T10:14:27,437   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/ercc_parser.py -> build/bdist.linux-armv7l/wheel/./pybiotk/utils
2025-12-09T10:14:27,439   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/rmats_filter.py -> build/bdist.linux-armv7l/wheel/./pybiotk/utils
2025-12-09T10:14:27,440   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/merge_row.py -> build/bdist.linux-armv7l/wheel/./pybiotk/utils
2025-12-09T10:14:27,443   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/fasta_filter.py -> build/bdist.linux-armv7l/wheel/./pybiotk/utils
2025-12-09T10:14:27,445   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/fastq_join.py -> build/bdist.linux-armv7l/wheel/./pybiotk/utils
2025-12-09T10:14:27,447   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/__init__.py -> build/bdist.linux-armv7l/wheel/./pybiotk/utils
2025-12-09T10:14:27,449   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/fragment_size.py -> build/bdist.linux-armv7l/wheel/./pybiotk/utils
2025-12-09T10:14:27,451   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/reference_count.py -> build/bdist.linux-armv7l/wheel/./pybiotk/utils
2025-12-09T10:14:27,453   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/normalize.py -> build/bdist.linux-armv7l/wheel/./pybiotk/utils
2025-12-09T10:14:27,455   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/read_tables.py -> build/bdist.linux-armv7l/wheel/./pybiotk/utils
2025-12-09T10:14:27,456   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/genomefetcher.py -> build/bdist.linux-armv7l/wheel/./pybiotk/utils
2025-12-09T10:14:27,459   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/bigwigfetcher.py -> build/bdist.linux-armv7l/wheel/./pybiotk/utils
2025-12-09T10:14:27,461   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/summary_log.py -> build/bdist.linux-armv7l/wheel/./pybiotk/utils
2025-12-09T10:14:27,463   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/pyanno.py -> build/bdist.linux-armv7l/wheel/./pybiotk/utils
2025-12-09T10:14:27,465   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/fastx_rename.py -> build/bdist.linux-armv7l/wheel/./pybiotk/utils
2025-12-09T10:14:27,467   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/gtf_filter.py -> build/bdist.linux-armv7l/wheel/./pybiotk/utils
2025-12-09T10:14:27,469   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/reverse_fastx.py -> build/bdist.linux-armv7l/wheel/./pybiotk/utils
2025-12-09T10:14:27,471   creating build/bdist.linux-armv7l/wheel/pybiotk/convert
2025-12-09T10:14:27,472   copying build/lib.linux-armv7l-cpython-311/pybiotk/convert/bampe_order_by_name.py -> build/bdist.linux-armv7l/wheel/./pybiotk/convert
2025-12-09T10:14:27,474   copying build/lib.linux-armv7l-cpython-311/pybiotk/convert/fa2fastq.py -> build/bdist.linux-armv7l/wheel/./pybiotk/convert
2025-12-09T10:14:27,476   copying build/lib.linux-armv7l-cpython-311/pybiotk/convert/__init__.py -> build/bdist.linux-armv7l/wheel/./pybiotk/convert
2025-12-09T10:14:27,477   copying build/lib.linux-armv7l-cpython-311/pybiotk/convert/bed2bedgraph.py -> build/bdist.linux-armv7l/wheel/./pybiotk/convert
2025-12-09T10:14:27,479   copying build/lib.linux-armv7l-cpython-311/pybiotk/convert/gtf2bed.py -> build/bdist.linux-armv7l/wheel/./pybiotk/convert
2025-12-09T10:14:27,481   copying build/lib.linux-armv7l-cpython-311/pybiotk/convert/fq2fasta.py -> build/bdist.linux-armv7l/wheel/./pybiotk/convert
2025-12-09T10:14:27,483   copying build/lib.linux-armv7l-cpython-311/pybiotk/convert/bam2fastx.py -> build/bdist.linux-armv7l/wheel/./pybiotk/convert
2025-12-09T10:14:27,485   creating build/bdist.linux-armv7l/wheel/pybiotk/annodb
2025-12-09T10:14:27,487   copying build/lib.linux-armv7l-cpython-311/pybiotk/annodb/anno.py -> build/bdist.linux-armv7l/wheel/./pybiotk/annodb
2025-12-09T10:14:27,489   copying build/lib.linux-armv7l-cpython-311/pybiotk/annodb/__init__.py -> build/bdist.linux-armv7l/wheel/./pybiotk/annodb
2025-12-09T10:14:27,490   copying build/lib.linux-armv7l-cpython-311/pybiotk/annodb/gene.py -> build/bdist.linux-armv7l/wheel/./pybiotk/annodb
2025-12-09T10:14:27,493   copying build/lib.linux-armv7l-cpython-311/pybiotk/annodb/transcript.py -> build/bdist.linux-armv7l/wheel/./pybiotk/annodb
2025-12-09T10:14:27,496   copying build/lib.linux-armv7l-cpython-311/pybiotk/annodb/merged_transcript.py -> build/bdist.linux-armv7l/wheel/./pybiotk/annodb
2025-12-09T10:14:27,500   creating build/bdist.linux-armv7l/wheel/pybiotk/bx
2025-12-09T10:14:27,502   copying build/lib.linux-armv7l-cpython-311/pybiotk/bx/cluster.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./pybiotk/bx
2025-12-09T10:14:27,518   copying build/lib.linux-armv7l-cpython-311/pybiotk/bx/intersection.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./pybiotk/bx
2025-12-09T10:14:27,549   copying build/lib.linux-armv7l-cpython-311/pybiotk/bx/bitset.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./pybiotk/bx
2025-12-09T10:14:27,582   creating build/bdist.linux-armv7l/wheel/stream
2025-12-09T10:14:27,586   copying build/lib.linux-armv7l-cpython-311/stream/__init__.py -> build/bdist.linux-armv7l/wheel/./stream
2025-12-09T10:14:27,595   copying build/lib.linux-armv7l-cpython-311/stream/pipe.py -> build/bdist.linux-armv7l/wheel/./stream
2025-12-09T10:14:27,603   copying build/lib.linux-armv7l-cpython-311/stream/stream.py -> build/bdist.linux-armv7l/wheel/./stream
2025-12-09T10:14:27,606   running install_egg_info
2025-12-09T10:14:27,621   Copying src/pybiotk.egg-info to build/bdist.linux-armv7l/wheel/./pybiotk-1.3.3-py3.11.egg-info
2025-12-09T10:14:27,646   running install_scripts
2025-12-09T10:14:27,647   creating build/bdist.linux-armv7l/wheel/pybiotk-1.3.3.data/scripts
2025-12-09T10:14:27,649   copying build/scripts-3.11/plot_FRiPs.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.3.3.data/scripts
2025-12-09T10:14:27,651   copying build/scripts-3.11/plot_corr.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.3.3.data/scripts
2025-12-09T10:14:27,652   copying build/scripts-3.11/plot_peak_width.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.3.3.data/scripts
2025-12-09T10:14:27,654   copying build/scripts-3.11/plot_bar.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.3.3.data/scripts
2025-12-09T10:14:27,656   copying build/scripts-3.11/fasta_u2t.sh -> build/bdist.linux-armv7l/wheel/pybiotk-1.3.3.data/scripts
2025-12-09T10:14:27,658   copying build/scripts-3.11/diff_expr_plot.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.3.3.data/scripts
2025-12-09T10:14:27,661   copying build/scripts-3.11/diff_expr_DESeq2.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.3.3.data/scripts
2025-12-09T10:14:27,663   copying build/scripts-3.11/plot_venn.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.3.3.data/scripts
2025-12-09T10:14:27,665   copying build/scripts-3.11/get_chrom_length.sh -> build/bdist.linux-armv7l/wheel/pybiotk-1.3.3.data/scripts
2025-12-09T10:14:27,667   copying build/scripts-3.11/fastq_len.sh -> build/bdist.linux-armv7l/wheel/pybiotk-1.3.3.data/scripts
2025-12-09T10:14:27,669   copying build/scripts-3.11/gtfparser.sh -> build/bdist.linux-armv7l/wheel/pybiotk-1.3.3.data/scripts
2025-12-09T10:14:27,671   copying build/scripts-3.11/remove_duplicates.sh -> build/bdist.linux-armv7l/wheel/pybiotk-1.3.3.data/scripts
2025-12-09T10:14:27,673   copying build/scripts-3.11/fasta_len.sh -> build/bdist.linux-armv7l/wheel/pybiotk-1.3.3.data/scripts
2025-12-09T10:14:27,675   copying build/scripts-3.11/merge_subseq.sh -> build/bdist.linux-armv7l/wheel/pybiotk-1.3.3.data/scripts
2025-12-09T10:14:27,677   copying build/scripts-3.11/plot_deeptools_fragmentsize.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.3.3.data/scripts
2025-12-09T10:14:27,679   copying build/scripts-3.11/plot_rep_cor.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.3.3.data/scripts
2025-12-09T10:14:27,681   copying build/scripts-3.11/plot_chip_summary.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.3.3.data/scripts
2025-12-09T10:14:27,683   copying build/scripts-3.11/peak_anno.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.3.3.data/scripts
2025-12-09T10:14:27,685   copying build/scripts-3.11/plot_hist.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.3.3.data/scripts
2025-12-09T10:14:27,687   copying build/scripts-3.11/diff_expr_edgeR.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.3.3.data/scripts
2025-12-09T10:14:27,689   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.3.3.data/scripts/plot_FRiPs.R to 755
2025-12-09T10:14:27,689   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.3.3.data/scripts/plot_corr.R to 755
2025-12-09T10:14:27,690   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.3.3.data/scripts/plot_peak_width.R to 755
2025-12-09T10:14:27,690   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.3.3.data/scripts/plot_bar.R to 755
2025-12-09T10:14:27,691   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.3.3.data/scripts/fasta_u2t.sh to 755
2025-12-09T10:14:27,692   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.3.3.data/scripts/diff_expr_plot.R to 755
2025-12-09T10:14:27,692   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.3.3.data/scripts/diff_expr_DESeq2.R to 755
2025-12-09T10:14:27,693   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.3.3.data/scripts/plot_venn.R to 755
2025-12-09T10:14:27,693   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.3.3.data/scripts/get_chrom_length.sh to 755
2025-12-09T10:14:27,694   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.3.3.data/scripts/fastq_len.sh to 755
2025-12-09T10:14:27,694   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.3.3.data/scripts/gtfparser.sh to 755
2025-12-09T10:14:27,695   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.3.3.data/scripts/remove_duplicates.sh to 755
2025-12-09T10:14:27,695   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.3.3.data/scripts/fasta_len.sh to 755
2025-12-09T10:14:27,696   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.3.3.data/scripts/merge_subseq.sh to 755
2025-12-09T10:14:27,696   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.3.3.data/scripts/plot_deeptools_fragmentsize.R to 755
2025-12-09T10:14:27,697   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.3.3.data/scripts/plot_rep_cor.R to 755
2025-12-09T10:14:27,697   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.3.3.data/scripts/plot_chip_summary.R to 755
2025-12-09T10:14:27,698   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.3.3.data/scripts/peak_anno.R to 755
2025-12-09T10:14:27,698   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.3.3.data/scripts/plot_hist.R to 755
2025-12-09T10:14:27,699   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.3.3.data/scripts/diff_expr_edgeR.R to 755
2025-12-09T10:14:27,774   creating build/bdist.linux-armv7l/wheel/pybiotk-1.3.3.dist-info/WHEEL
2025-12-09T10:14:27,777   creating '/tmp/pip-wheel-hf70deem/.tmp-mhe0n_4_/pybiotk-1.3.3-cp311-cp311-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2025-12-09T10:14:27,780   adding 'pybiotk/__init__.py'
2025-12-09T10:14:27,782   adding 'pybiotk/annodb/__init__.py'
2025-12-09T10:14:27,784   adding 'pybiotk/annodb/anno.py'
2025-12-09T10:14:27,786   adding 'pybiotk/annodb/gene.py'
2025-12-09T10:14:27,788   adding 'pybiotk/annodb/merged_transcript.py'
2025-12-09T10:14:27,790   adding 'pybiotk/annodb/transcript.py'
2025-12-09T10:14:27,921   adding 'pybiotk/bx/bitset.cpython-311-arm-linux-gnueabihf.so'
2025-12-09T10:14:27,976   adding 'pybiotk/bx/cluster.cpython-311-arm-linux-gnueabihf.so'
2025-12-09T10:14:28,152   adding 'pybiotk/bx/intersection.cpython-311-arm-linux-gnueabihf.so'
2025-12-09T10:14:28,158   adding 'pybiotk/convert/__init__.py'
2025-12-09T10:14:28,160   adding 'pybiotk/convert/bam2fastx.py'
2025-12-09T10:14:28,161   adding 'pybiotk/convert/bampe_order_by_name.py'
2025-12-09T10:14:28,162   adding 'pybiotk/convert/bed2bedgraph.py'
2025-12-09T10:14:28,163   adding 'pybiotk/convert/fa2fastq.py'
2025-12-09T10:14:28,165   adding 'pybiotk/convert/fq2fasta.py'
2025-12-09T10:14:28,166   adding 'pybiotk/convert/gtf2bed.py'
2025-12-09T10:14:28,167   adding 'pybiotk/data/__init__.py'
2025-12-09T10:14:28,170   adding 'pybiotk/data/hg38.chrom.sizes'
2025-12-09T10:14:28,171   adding 'pybiotk/data/mm10.chrom.sizes'
2025-12-09T10:14:28,173   adding 'pybiotk/intervals/__init__.py'
2025-12-09T10:14:28,174   adding 'pybiotk/intervals/grange.py'
2025-12-09T10:14:28,175   adding 'pybiotk/intervals/merge_bed3.py'
2025-12-09T10:14:28,177   adding 'pybiotk/intervals/merge_intervals.py'
2025-12-09T10:14:28,178   adding 'pybiotk/io/__init__.py'
2025-12-09T10:14:28,180   adding 'pybiotk/io/bam.py'
2025-12-09T10:14:28,182   adding 'pybiotk/io/bed.py'
2025-12-09T10:14:28,183   adding 'pybiotk/io/bw.py'
2025-12-09T10:14:28,184   adding 'pybiotk/io/fasta.py'
2025-12-09T10:14:28,186   adding 'pybiotk/io/fastq.py'
2025-12-09T10:14:28,188   adding 'pybiotk/io/gtf.py'
2025-12-09T10:14:28,190   adding 'pybiotk/meta/__init__.py'
2025-12-09T10:14:28,191   adding 'pybiotk/meta/merge_transcript.py'
2025-12-09T10:14:28,193   adding 'pybiotk/meta/metaplot.py'
2025-12-09T10:14:28,195   adding 'pybiotk/meta/task.py'
2025-12-09T10:14:28,196   adding 'pybiotk/string/__init__.py'
2025-12-09T10:14:28,198   adding 'pybiotk/string/motif.py'
2025-12-09T10:14:28,199   adding 'pybiotk/string/sequence.py'
2025-12-09T10:14:28,201   adding 'pybiotk/utils/__init__.py'
2025-12-09T10:14:28,202   adding 'pybiotk/utils/bam_random.py'
2025-12-09T10:14:28,204   adding 'pybiotk/utils/bigwigfetcher.py'
2025-12-09T10:14:28,205   adding 'pybiotk/utils/ercc_parser.py'
2025-12-09T10:14:28,207   adding 'pybiotk/utils/fasta_filter.py'
2025-12-09T10:14:28,208   adding 'pybiotk/utils/fastq_join.py'
2025-12-09T10:14:28,210   adding 'pybiotk/utils/fastq_uniq.py'
2025-12-09T10:14:28,211   adding 'pybiotk/utils/fastx_rename.py'
2025-12-09T10:14:28,212   adding 'pybiotk/utils/fragment_size.py'
2025-12-09T10:14:28,214   adding 'pybiotk/utils/genomefetcher.py'
2025-12-09T10:14:28,215   adding 'pybiotk/utils/gtf_filter.py'
2025-12-09T10:14:28,217   adding 'pybiotk/utils/infer_experiment.py'
2025-12-09T10:14:28,219   adding 'pybiotk/utils/merge_row.py'
2025-12-09T10:14:28,220   adding 'pybiotk/utils/merge_subseq.py'
2025-12-09T10:14:28,222   adding 'pybiotk/utils/normalize.py'
2025-12-09T10:14:28,224   adding 'pybiotk/utils/pyanno.py'
2025-12-09T10:14:28,225   adding 'pybiotk/utils/read_tables.py'
2025-12-09T10:14:28,226   adding 'pybiotk/utils/reference_count.py'
2025-12-09T10:14:28,227   adding 'pybiotk/utils/reverse_fastx.py'
2025-12-09T10:14:28,229   adding 'pybiotk/utils/rmats_filter.py'
2025-12-09T10:14:28,230   adding 'pybiotk/utils/seq_random.py'
2025-12-09T10:14:28,232   adding 'pybiotk/utils/subseq_analysis.py'
2025-12-09T10:14:28,234   adding 'pybiotk/utils/summary_log.py'
2025-12-09T10:14:28,235   adding 'pybiotk/utils/utils.py'
2025-12-09T10:14:28,238   adding 'pybiotk-1.3.3.data/scripts/diff_expr_DESeq2.R'
2025-12-09T10:14:28,240   adding 'pybiotk-1.3.3.data/scripts/diff_expr_edgeR.R'
2025-12-09T10:14:28,242   adding 'pybiotk-1.3.3.data/scripts/diff_expr_plot.R'
2025-12-09T10:14:28,243   adding 'pybiotk-1.3.3.data/scripts/fasta_len.sh'
2025-12-09T10:14:28,245   adding 'pybiotk-1.3.3.data/scripts/fasta_u2t.sh'
2025-12-09T10:14:28,246   adding 'pybiotk-1.3.3.data/scripts/fastq_len.sh'
2025-12-09T10:14:28,247   adding 'pybiotk-1.3.3.data/scripts/get_chrom_length.sh'
2025-12-09T10:14:28,248   adding 'pybiotk-1.3.3.data/scripts/gtfparser.sh'
2025-12-09T10:14:28,249   adding 'pybiotk-1.3.3.data/scripts/merge_subseq.sh'
2025-12-09T10:14:28,251   adding 'pybiotk-1.3.3.data/scripts/peak_anno.R'
2025-12-09T10:14:28,252   adding 'pybiotk-1.3.3.data/scripts/plot_FRiPs.R'
2025-12-09T10:14:28,253   adding 'pybiotk-1.3.3.data/scripts/plot_bar.R'
2025-12-09T10:14:28,255   adding 'pybiotk-1.3.3.data/scripts/plot_chip_summary.R'
2025-12-09T10:14:28,256   adding 'pybiotk-1.3.3.data/scripts/plot_corr.R'
2025-12-09T10:14:28,258   adding 'pybiotk-1.3.3.data/scripts/plot_deeptools_fragmentsize.R'
2025-12-09T10:14:28,259   adding 'pybiotk-1.3.3.data/scripts/plot_hist.R'
2025-12-09T10:14:28,260   adding 'pybiotk-1.3.3.data/scripts/plot_peak_width.R'
2025-12-09T10:14:28,262   adding 'pybiotk-1.3.3.data/scripts/plot_rep_cor.R'
2025-12-09T10:14:28,263   adding 'pybiotk-1.3.3.data/scripts/plot_venn.R'
2025-12-09T10:14:28,265   adding 'pybiotk-1.3.3.data/scripts/remove_duplicates.sh'
2025-12-09T10:14:28,267   adding 'pybiotk-1.3.3.dist-info/licenses/LICENSE.txt'
2025-12-09T10:14:28,269   adding 'stream/__init__.py'
2025-12-09T10:14:28,271   adding 'stream/pipe.py'
2025-12-09T10:14:28,272   adding 'stream/stream.py'
2025-12-09T10:14:28,274   adding 'pybiotk-1.3.3.dist-info/METADATA'
2025-12-09T10:14:28,275   adding 'pybiotk-1.3.3.dist-info/WHEEL'
2025-12-09T10:14:28,276   adding 'pybiotk-1.3.3.dist-info/entry_points.txt'
2025-12-09T10:14:28,277   adding 'pybiotk-1.3.3.dist-info/top_level.txt'
2025-12-09T10:14:28,279   adding 'pybiotk-1.3.3.dist-info/RECORD'
2025-12-09T10:14:28,289   removing build/bdist.linux-armv7l/wheel
2025-12-09T10:14:28,488   Building wheel for pybiotk (pyproject.toml): finished with status 'done'
2025-12-09T10:14:28,515   Created wheel for pybiotk: filename=pybiotk-1.3.3-cp311-cp311-linux_armv7l.whl size=744476 sha256=78bfea0d25f2634368490eac43898848bbf220c401807f5f6adcbaf8f72503b9
2025-12-09T10:14:28,517   Stored in directory: /tmp/pip-ephem-wheel-cache-co63wtxc/wheels/e3/5b/19/9df3302fabcece23cba32920b24f14514a9f5a19ed14f9a7ab
2025-12-09T10:14:28,530 Successfully built pybiotk
2025-12-09T10:14:28,558 Removed build tracker: '/tmp/pip-build-tracker-tztap4qg'