2025-12-10T01:48:41,114 Created temporary directory: /tmp/pip-ephem-wheel-cache-z2mmfb41
2025-12-10T01:48:41,116 Created temporary directory: /tmp/pip-build-tracker-ptyshv08
2025-12-10T01:48:41,117 Initialized build tracking at /tmp/pip-build-tracker-ptyshv08
2025-12-10T01:48:41,117 Created build tracker: /tmp/pip-build-tracker-ptyshv08
2025-12-10T01:48:41,117 Entered build tracker: /tmp/pip-build-tracker-ptyshv08
2025-12-10T01:48:41,118 Created temporary directory: /tmp/pip-wheel-rkjzkm5_
2025-12-10T01:48:41,121 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2025-12-10T01:48:41,123 Created temporary directory: /tmp/pip-ephem-wheel-cache-uvzsyouj
2025-12-10T01:48:41,148 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2025-12-10T01:48:41,151 2 location(s) to search for versions of boltzgen:
2025-12-10T01:48:41,151 * https://pypi.org/simple/boltzgen/
2025-12-10T01:48:41,151 * https://www.piwheels.org/simple/boltzgen/
2025-12-10T01:48:41,152 Fetching project page and analyzing links: https://pypi.org/simple/boltzgen/
2025-12-10T01:48:41,153 Getting page https://pypi.org/simple/boltzgen/
2025-12-10T01:48:41,154 Found index url https://pypi.org/simple
2025-12-10T01:48:41,364 Fetched page https://pypi.org/simple/boltzgen/ as application/vnd.pypi.simple.v1+json
2025-12-10T01:48:41,369   Skipping link: No binaries permitted for boltzgen: https://files.pythonhosted.org/packages/63/90/abce182b30c62f13029523927c04820cfa69e03635c4ab7f2ca01aa64fc8/boltzgen-0.1.0-py3-none-any.whl (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.9)
2025-12-10T01:48:41,370   Found link https://files.pythonhosted.org/packages/19/6d/3259f594bdc5688261f220b0280facea3a2e497e34609c1d358c40ff26df/boltzgen-0.1.0.tar.gz (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.9), version: 0.1.0
2025-12-10T01:48:41,371   Skipping link: No binaries permitted for boltzgen: https://files.pythonhosted.org/packages/b9/e1/bea73eb825594a48e824a59ea2484c0748020a9713c5b2503d7cfe033c2b/boltzgen-0.1.1-py3-none-any.whl (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.9)
2025-12-10T01:48:41,372   Found link https://files.pythonhosted.org/packages/78/94/91e0892caf7d08ad1ee432f2d64d07f0bb4cc5fa53a010b2995db7a90dbf/boltzgen-0.1.1.tar.gz (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.9), version: 0.1.1
2025-12-10T01:48:41,372   Skipping link: No binaries permitted for boltzgen: https://files.pythonhosted.org/packages/74/06/6834e94921b9a5c978a3b6014e20db1dc528e5b67d0dcad0f8f47836908c/boltzgen-0.1.2-py3-none-any.whl (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.9)
2025-12-10T01:48:41,373   Found link https://files.pythonhosted.org/packages/20/02/6579821c7da06745452f2ecb95605dce1b8de1658d1dd4be5c6c3b970208/boltzgen-0.1.2.tar.gz (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.9), version: 0.1.2
2025-12-10T01:48:41,374   Skipping link: No binaries permitted for boltzgen: https://files.pythonhosted.org/packages/c0/a0/332273a340fe1736c69fb400c653794e3aa0f8ecc8dbe7b3b5eef1cd1511/boltzgen-0.1.3-py3-none-any.whl (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.9)
2025-12-10T01:48:41,375   Found link https://files.pythonhosted.org/packages/d1/ff/ffc1886142c710039ef8c9ec9e9646efe78e79371d51375b76787023d925/boltzgen-0.1.3.tar.gz (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.9), version: 0.1.3
2025-12-10T01:48:41,376   Skipping link: No binaries permitted for boltzgen: https://files.pythonhosted.org/packages/ab/9c/41583212ccc836d5832e0c7a6def8bb4e34c09ec29fee569e8c823ee6388/boltzgen-0.1.4-py3-none-any.whl (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.9)
2025-12-10T01:48:41,377   Found link https://files.pythonhosted.org/packages/39/5c/0c5cb924934b1ec2436e7fa2620ea8729035ca89b6272caa97e2ce443d30/boltzgen-0.1.4.tar.gz (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.9), version: 0.1.4
2025-12-10T01:48:41,378   Skipping link: No binaries permitted for boltzgen: https://files.pythonhosted.org/packages/b9/99/6dd2e0e777332886761c2cce2da02a3a1c5e216911a464f8c68b69b28ca0/boltzgen-0.1.5-py3-none-any.whl (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.11)
2025-12-10T01:48:41,379   Found link https://files.pythonhosted.org/packages/e6/f8/2b5c1f0f45ba484a1918e79c4d24cec8e7097b427af7d87696a64717d5ac/boltzgen-0.1.5.tar.gz (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.11), version: 0.1.5
2025-12-10T01:48:41,380   Skipping link: No binaries permitted for boltzgen: https://files.pythonhosted.org/packages/3e/88/4435438f149e36eb0bac1a15450e3de3d94129a1bb1b76e9c288dbcf1bc4/boltzgen-0.1.6-py3-none-any.whl (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.11)
2025-12-10T01:48:41,380   Found link https://files.pythonhosted.org/packages/f4/73/c55d02b829c4f12918ef1ff22f1752300b3a9dc8a19a9679dc6b30344cb9/boltzgen-0.1.6.tar.gz (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.11), version: 0.1.6
2025-12-10T01:48:41,381   Skipping link: No binaries permitted for boltzgen: https://files.pythonhosted.org/packages/4e/8d/203bda8dee5285f044a212d540a9faa4ec9502d2688f8617f2bf49501ba6/boltzgen-0.1.7-py3-none-any.whl (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.11)
2025-12-10T01:48:41,382   Found link https://files.pythonhosted.org/packages/90/7a/b6b99cb1b1f9a776746aeb29e9ecb49197b1f83a716b61fc71b217510600/boltzgen-0.1.7.tar.gz (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.11), version: 0.1.7
2025-12-10T01:48:41,382   Skipping link: No binaries permitted for boltzgen: https://files.pythonhosted.org/packages/92/9b/8d2dc07b96cf035ca328113487a7001de080f4626877e1f61b6e4ca4e024/boltzgen-0.1.8-py3-none-any.whl (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.11)
2025-12-10T01:48:41,383   Found link https://files.pythonhosted.org/packages/76/e5/08c09469e5cae238c0b706b527f5bb34b63eee433bb5d8df67a165deba40/boltzgen-0.1.8.tar.gz (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.11), version: 0.1.8
2025-12-10T01:48:41,384   Skipping link: No binaries permitted for boltzgen: https://files.pythonhosted.org/packages/8a/50/894b5a7fa4c2684ccab13bdf51d6ac6e1e3fc3d0d324d886c16760d76ff1/boltzgen-0.1.9-py3-none-any.whl (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.11)
2025-12-10T01:48:41,385   Found link https://files.pythonhosted.org/packages/02/7b/00d9d7e65a0ce01e49dd46b9690de7fcc6ab18a3cab882e04e2586ec8b35/boltzgen-0.1.9.tar.gz (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.11), version: 0.1.9
2025-12-10T01:48:41,386 Fetching project page and analyzing links: https://www.piwheels.org/simple/boltzgen/
2025-12-10T01:48:41,387 Getting page https://www.piwheels.org/simple/boltzgen/
2025-12-10T01:48:41,388 Found index url https://www.piwheels.org/simple
2025-12-10T01:48:41,575 Fetched page https://www.piwheels.org/simple/boltzgen/ as text/html
2025-12-10T01:48:41,579   Skipping link: No binaries permitted for boltzgen: https://www.piwheels.org/simple/boltzgen/boltzgen-0.1.8-py3-none-any.whl#sha256=06ab9d6e376a074706bf5ec577b59fd7f59d56f87b79948f5f1b5b0e0f45ccdd (from https://www.piwheels.org/simple/boltzgen/) (requires-python:>=3.11)
2025-12-10T01:48:41,580   Skipping link: No binaries permitted for boltzgen: https://www.piwheels.org/simple/boltzgen/boltzgen-0.1.7-py3-none-any.whl#sha256=9e026a4b483e47bd92a088f7fc2ba1b3bc84e74d93d99982f7a305330a0f38be (from https://www.piwheels.org/simple/boltzgen/) (requires-python:>=3.11)
2025-12-10T01:48:41,581   Skipping link: No binaries permitted for boltzgen: https://www.piwheels.org/simple/boltzgen/boltzgen-0.1.6-py3-none-any.whl#sha256=be8bb6bfb8c8a6a11498256d93a2147cd7561069dac561bb198f3c941231c70b (from https://www.piwheels.org/simple/boltzgen/) (requires-python:>=3.11)
2025-12-10T01:48:41,581   Skipping link: No binaries permitted for boltzgen: https://www.piwheels.org/simple/boltzgen/boltzgen-0.1.5-py3-none-any.whl#sha256=567e42f3cd1f8a8c24d7087b6a403d805594f6e62686348be18d8e7cfdddbec8 (from https://www.piwheels.org/simple/boltzgen/) (requires-python:>=3.11)
2025-12-10T01:48:41,582   Skipping link: No binaries permitted for boltzgen: https://www.piwheels.org/simple/boltzgen/boltzgen-0.1.4-py3-none-any.whl#sha256=3af2f20f1a3611f969104650791392db2e145fc24fb035a6ca66e716637576dc (from https://www.piwheels.org/simple/boltzgen/) (requires-python:>=3.9)
2025-12-10T01:48:41,583   Skipping link: No binaries permitted for boltzgen: https://www.piwheels.org/simple/boltzgen/boltzgen-0.1.3-py3-none-any.whl#sha256=1029da6f74a8b125d8c6c34beb6b0a7f71a3d57461631c4dc6f788b573c10247 (from https://www.piwheels.org/simple/boltzgen/) (requires-python:>=3.9)
2025-12-10T01:48:41,583   Skipping link: No binaries permitted for boltzgen: https://archive1.piwheels.org/simple/boltzgen/boltzgen-0.1.2-py3-none-any.whl#sha256=540dfba80316dc74e1622a369e825b5debdf02aa7cb197ebbb311186113017c4 (from https://www.piwheels.org/simple/boltzgen/) (requires-python:>=3.9)
2025-12-10T01:48:41,584   Skipping link: No binaries permitted for boltzgen: https://archive1.piwheels.org/simple/boltzgen/boltzgen-0.1.1-py3-none-any.whl#sha256=ba441ae54add47197ca07443c4bb7468bb6e30ae1e94224c21360afb80fd6215 (from https://www.piwheels.org/simple/boltzgen/) (requires-python:>=3.9)
2025-12-10T01:48:41,584   Skipping link: No binaries permitted for boltzgen: https://archive1.piwheels.org/simple/boltzgen/boltzgen-0.1.0-py3-none-any.whl#sha256=4c742030a0a07bb98c68ee543aad9b9d01c4a673e62ba78cab124ed43a91b644 (from https://www.piwheels.org/simple/boltzgen/) (requires-python:>=3.9)
2025-12-10T01:48:41,585 Skipping link: not a file: https://www.piwheels.org/simple/boltzgen/
2025-12-10T01:48:41,585 Skipping link: not a file: https://pypi.org/simple/boltzgen/
2025-12-10T01:48:41,605 Given no hashes to check 1 links for project 'boltzgen': discarding no candidates
2025-12-10T01:48:41,623 Collecting boltzgen==0.1.9
2025-12-10T01:48:41,625   Created temporary directory: /tmp/pip-unpack-qtzim3gi
2025-12-10T01:48:41,836   Downloading boltzgen-0.1.9.tar.gz (300 kB)
2025-12-10T01:48:42,241   Added boltzgen==0.1.9 from https://files.pythonhosted.org/packages/02/7b/00d9d7e65a0ce01e49dd46b9690de7fcc6ab18a3cab882e04e2586ec8b35/boltzgen-0.1.9.tar.gz to build tracker '/tmp/pip-build-tracker-ptyshv08'
2025-12-10T01:48:42,246   Created temporary directory: /tmp/pip-build-env-wd8sbnzq
2025-12-10T01:48:42,251   Installing build dependencies: started
2025-12-10T01:48:42,252   Running command pip subprocess to install build dependencies
2025-12-10T01:48:43,382   Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11)
2025-12-10T01:48:44,005   DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2025-12-10T01:48:44,028   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2025-12-10T01:48:45,818   Collecting setuptools>=61
2025-12-10T01:48:45,910     Using cached https://www.piwheels.org/simple/setuptools/setuptools-80.9.0-py3-none-any.whl (1.2 MB)
2025-12-10T01:48:48,858   Installing collected packages: setuptools
2025-12-10T01:48:52,513   Successfully installed setuptools-80.9.0
2025-12-10T01:48:52,778   Installing build dependencies: finished with status 'done'
2025-12-10T01:48:52,784   Getting requirements to build wheel: started
2025-12-10T01:48:52,786   Running command Getting requirements to build wheel
2025-12-10T01:48:53,505   running egg_info
2025-12-10T01:48:53,512   writing src/boltzgen.egg-info/PKG-INFO
2025-12-10T01:48:53,519   writing dependency_links to src/boltzgen.egg-info/dependency_links.txt
2025-12-10T01:48:53,521   writing entry points to src/boltzgen.egg-info/entry_points.txt
2025-12-10T01:48:53,525   writing requirements to src/boltzgen.egg-info/requires.txt
2025-12-10T01:48:53,526   writing top-level names to src/boltzgen.egg-info/top_level.txt
2025-12-10T01:48:53,584   reading manifest file 'src/boltzgen.egg-info/SOURCES.txt'
2025-12-10T01:48:53,593   adding license file 'LICENSE'
2025-12-10T01:48:53,601   writing manifest file 'src/boltzgen.egg-info/SOURCES.txt'
2025-12-10T01:48:53,698   Getting requirements to build wheel: finished with status 'done'
2025-12-10T01:48:53,702   Created temporary directory: /tmp/pip-modern-metadata-sizbtwff
2025-12-10T01:48:53,704   Preparing metadata (pyproject.toml): started
2025-12-10T01:48:53,705   Running command Preparing metadata (pyproject.toml)
2025-12-10T01:48:54,379   running dist_info
2025-12-10T01:48:54,392   creating /tmp/pip-modern-metadata-sizbtwff/boltzgen.egg-info
2025-12-10T01:48:54,394   writing /tmp/pip-modern-metadata-sizbtwff/boltzgen.egg-info/PKG-INFO
2025-12-10T01:48:54,401   writing dependency_links to /tmp/pip-modern-metadata-sizbtwff/boltzgen.egg-info/dependency_links.txt
2025-12-10T01:48:54,403   writing entry points to /tmp/pip-modern-metadata-sizbtwff/boltzgen.egg-info/entry_points.txt
2025-12-10T01:48:54,407   writing requirements to /tmp/pip-modern-metadata-sizbtwff/boltzgen.egg-info/requires.txt
2025-12-10T01:48:54,409   writing top-level names to /tmp/pip-modern-metadata-sizbtwff/boltzgen.egg-info/top_level.txt
2025-12-10T01:48:54,410   writing manifest file '/tmp/pip-modern-metadata-sizbtwff/boltzgen.egg-info/SOURCES.txt'
2025-12-10T01:48:54,461   reading manifest file '/tmp/pip-modern-metadata-sizbtwff/boltzgen.egg-info/SOURCES.txt'
2025-12-10T01:48:54,463   adding license file 'LICENSE'
2025-12-10T01:48:54,470   writing manifest file '/tmp/pip-modern-metadata-sizbtwff/boltzgen.egg-info/SOURCES.txt'
2025-12-10T01:48:54,471   creating '/tmp/pip-modern-metadata-sizbtwff/boltzgen-0.1.9.dist-info'
2025-12-10T01:48:54,600   Preparing metadata (pyproject.toml): finished with status 'done'
2025-12-10T01:48:54,605   Source in /tmp/pip-wheel-rkjzkm5_/boltzgen_a43835fd03c540788a5af55d7b47147f has version 0.1.9, which satisfies requirement boltzgen==0.1.9 from https://files.pythonhosted.org/packages/02/7b/00d9d7e65a0ce01e49dd46b9690de7fcc6ab18a3cab882e04e2586ec8b35/boltzgen-0.1.9.tar.gz
2025-12-10T01:48:54,606   Removed boltzgen==0.1.9 from https://files.pythonhosted.org/packages/02/7b/00d9d7e65a0ce01e49dd46b9690de7fcc6ab18a3cab882e04e2586ec8b35/boltzgen-0.1.9.tar.gz from build tracker '/tmp/pip-build-tracker-ptyshv08'
2025-12-10T01:48:54,612 Created temporary directory: /tmp/pip-unpack-yd0p1biq
2025-12-10T01:48:54,612 Building wheels for collected packages: boltzgen
2025-12-10T01:48:54,617   Created temporary directory: /tmp/pip-wheel-2o9zgqln
2025-12-10T01:48:54,618   Destination directory: /tmp/pip-wheel-2o9zgqln
2025-12-10T01:48:54,620   Building wheel for boltzgen (pyproject.toml): started
2025-12-10T01:48:54,622   Running command Building wheel for boltzgen (pyproject.toml)
2025-12-10T01:48:55,270   running bdist_wheel
2025-12-10T01:48:55,291   running build
2025-12-10T01:48:55,292   running build_py
2025-12-10T01:48:55,299   creating build/lib/boltzgen
2025-12-10T01:48:55,301   copying src/boltzgen/__init__.py -> build/lib/boltzgen
2025-12-10T01:48:55,303   creating build/lib/boltzgen/model
2025-12-10T01:48:55,304   copying src/boltzgen/model/__init__.py -> build/lib/boltzgen/model
2025-12-10T01:48:55,307   creating build/lib/boltzgen/task
2025-12-10T01:48:55,308   copying src/boltzgen/task/task.py -> build/lib/boltzgen/task
2025-12-10T01:48:55,310   copying src/boltzgen/task/__init__.py -> build/lib/boltzgen/task
2025-12-10T01:48:55,313   creating build/lib/boltzgen/resources
2025-12-10T01:48:55,314   copying src/boltzgen/resources/main.py -> build/lib/boltzgen/resources
2025-12-10T01:48:55,316   creating build/lib/boltzgen/data
2025-12-10T01:48:55,318   copying src/boltzgen/data/const.py -> build/lib/boltzgen/data
2025-12-10T01:48:55,321   copying src/boltzgen/data/rmsd_computation.py -> build/lib/boltzgen/data
2025-12-10T01:48:55,324   copying src/boltzgen/data/pad.py -> build/lib/boltzgen/data
2025-12-10T01:48:55,326   copying src/boltzgen/data/data.py -> build/lib/boltzgen/data
2025-12-10T01:48:55,329   copying src/boltzgen/data/mol.py -> build/lib/boltzgen/data
2025-12-10T01:48:55,332   copying src/boltzgen/data/__init__.py -> build/lib/boltzgen/data
2025-12-10T01:48:55,334   creating build/lib/boltzgen/cli
2025-12-10T01:48:55,335   copying src/boltzgen/cli/__init__.py -> build/lib/boltzgen/cli
2025-12-10T01:48:55,337   copying src/boltzgen/cli/boltzgen.py -> build/lib/boltzgen/cli
2025-12-10T01:48:55,341   creating build/lib/boltzgen/utils
2025-12-10T01:48:55,342   copying src/boltzgen/utils/pipeline_progress_bar.py -> build/lib/boltzgen/utils
2025-12-10T01:48:55,344   copying src/boltzgen/utils/quiet.py -> build/lib/boltzgen/utils
2025-12-10T01:48:55,347   copying src/boltzgen/utils/__init__.py -> build/lib/boltzgen/utils
2025-12-10T01:48:55,349   creating build/lib/boltzgen/model/models
2025-12-10T01:48:55,351   copying src/boltzgen/model/models/__init__.py -> build/lib/boltzgen/model/models
2025-12-10T01:48:55,353   copying src/boltzgen/model/models/boltz.py -> build/lib/boltzgen/model/models
2025-12-10T01:48:55,357   creating build/lib/boltzgen/model/modules
2025-12-10T01:48:55,358   copying src/boltzgen/model/modules/masker.py -> build/lib/boltzgen/model/modules
2025-12-10T01:48:55,361   copying src/boltzgen/model/modules/inverse_fold.py -> build/lib/boltzgen/model/modules
2025-12-10T01:48:55,364   copying src/boltzgen/model/modules/scatter_utils.py -> build/lib/boltzgen/model/modules
2025-12-10T01:48:55,366   copying src/boltzgen/model/modules/utils.py -> build/lib/boltzgen/model/modules
2025-12-10T01:48:55,368   copying src/boltzgen/model/modules/encoders.py -> build/lib/boltzgen/model/modules
2025-12-10T01:48:55,372   copying src/boltzgen/model/modules/__init__.py -> build/lib/boltzgen/model/modules
2025-12-10T01:48:55,374   copying src/boltzgen/model/modules/trunk.py -> build/lib/boltzgen/model/modules
2025-12-10T01:48:55,377   copying src/boltzgen/model/modules/confidence.py -> build/lib/boltzgen/model/modules
2025-12-10T01:48:55,379   copying src/boltzgen/model/modules/diffusion.py -> build/lib/boltzgen/model/modules
2025-12-10T01:48:55,383   copying src/boltzgen/model/modules/transformers.py -> build/lib/boltzgen/model/modules
2025-12-10T01:48:55,385   copying src/boltzgen/model/modules/affinity.py -> build/lib/boltzgen/model/modules
2025-12-10T01:48:55,388   copying src/boltzgen/model/modules/diffusion_conditioning.py -> build/lib/boltzgen/model/modules
2025-12-10T01:48:55,392   creating build/lib/boltzgen/model/optim
2025-12-10T01:48:55,393   copying src/boltzgen/model/optim/ema.py -> build/lib/boltzgen/model/optim
2025-12-10T01:48:55,396   copying src/boltzgen/model/optim/scheduler.py -> build/lib/boltzgen/model/optim
2025-12-10T01:48:55,398   copying src/boltzgen/model/optim/__init__.py -> build/lib/boltzgen/model/optim
2025-12-10T01:48:55,400   creating build/lib/boltzgen/model/layers
2025-12-10T01:48:55,402   copying src/boltzgen/model/layers/initialize.py -> build/lib/boltzgen/model/layers
2025-12-10T01:48:55,404   copying src/boltzgen/model/layers/triangular.py -> build/lib/boltzgen/model/layers
2025-12-10T01:48:55,406   copying src/boltzgen/model/layers/outer_product_mean.py -> build/lib/boltzgen/model/layers
2025-12-10T01:48:55,408   copying src/boltzgen/model/layers/transition.py -> build/lib/boltzgen/model/layers
2025-12-10T01:48:55,410   copying src/boltzgen/model/layers/pairformer.py -> build/lib/boltzgen/model/layers
2025-12-10T01:48:55,413   copying src/boltzgen/model/layers/__init__.py -> build/lib/boltzgen/model/layers
2025-12-10T01:48:55,415   copying src/boltzgen/model/layers/attention.py -> build/lib/boltzgen/model/layers
2025-12-10T01:48:55,417   copying src/boltzgen/model/layers/miniformer.py -> build/lib/boltzgen/model/layers
2025-12-10T01:48:55,419   copying src/boltzgen/model/layers/relative.py -> build/lib/boltzgen/model/layers
2025-12-10T01:48:55,422   copying src/boltzgen/model/layers/pair_averaging.py -> build/lib/boltzgen/model/layers
2025-12-10T01:48:55,424   copying src/boltzgen/model/layers/dropout.py -> build/lib/boltzgen/model/layers
2025-12-10T01:48:55,426   copying src/boltzgen/model/layers/confidence_utils.py -> build/lib/boltzgen/model/layers
2025-12-10T01:48:55,429   creating build/lib/boltzgen/model/validation
2025-12-10T01:48:55,431   copying src/boltzgen/model/validation/design.py -> build/lib/boltzgen/model/validation
2025-12-10T01:48:55,434   copying src/boltzgen/model/validation/validator.py -> build/lib/boltzgen/model/validation
2025-12-10T01:48:55,438   copying src/boltzgen/model/validation/rcsb.py -> build/lib/boltzgen/model/validation
2025-12-10T01:48:55,440   copying src/boltzgen/model/validation/refolding.py -> build/lib/boltzgen/model/validation
2025-12-10T01:48:55,443   creating build/lib/boltzgen/model/loss
2025-12-10T01:48:55,444   copying src/boltzgen/model/loss/validation.py -> build/lib/boltzgen/model/loss
2025-12-10T01:48:55,447   copying src/boltzgen/model/loss/bfactor.py -> build/lib/boltzgen/model/loss
2025-12-10T01:48:55,449   copying src/boltzgen/model/loss/distogram.py -> build/lib/boltzgen/model/loss
2025-12-10T01:48:55,451   copying src/boltzgen/model/loss/__init__.py -> build/lib/boltzgen/model/loss
2025-12-10T01:48:55,453   copying src/boltzgen/model/loss/confidence.py -> build/lib/boltzgen/model/loss
2025-12-10T01:48:55,456   copying src/boltzgen/model/loss/diffusion.py -> build/lib/boltzgen/model/loss
2025-12-10T01:48:55,458   copying src/boltzgen/model/loss/res_type.py -> build/lib/boltzgen/model/loss
2025-12-10T01:48:55,461   creating build/lib/boltzgen/model/layers/triangular_attention
2025-12-10T01:48:55,462   copying src/boltzgen/model/layers/triangular_attention/utils.py -> build/lib/boltzgen/model/layers/triangular_attention
2025-12-10T01:48:55,464   copying src/boltzgen/model/layers/triangular_attention/primitives.py -> build/lib/boltzgen/model/layers/triangular_attention
2025-12-10T01:48:55,467   copying src/boltzgen/model/layers/triangular_attention/__init__.py -> build/lib/boltzgen/model/layers/triangular_attention
2025-12-10T01:48:55,468   copying src/boltzgen/model/layers/triangular_attention/attention.py -> build/lib/boltzgen/model/layers/triangular_attention
2025-12-10T01:48:55,471   creating build/lib/boltzgen/task/train
2025-12-10T01:48:55,473   copying src/boltzgen/task/train/data.py -> build/lib/boltzgen/task/train
2025-12-10T01:48:55,476   copying src/boltzgen/task/train/__init__.py -> build/lib/boltzgen/task/train
2025-12-10T01:48:55,478   copying src/boltzgen/task/train/train.py -> build/lib/boltzgen/task/train
2025-12-10T01:48:55,481   creating build/lib/boltzgen/task/filter
2025-12-10T01:48:55,482   copying src/boltzgen/task/filter/filter.py -> build/lib/boltzgen/task/filter
2025-12-10T01:48:55,486   copying src/boltzgen/task/filter/__init__.py -> build/lib/boltzgen/task/filter
2025-12-10T01:48:55,488   copying src/boltzgen/task/filter/seqplot_utils.py -> build/lib/boltzgen/task/filter
2025-12-10T01:48:55,491   creating build/lib/boltzgen/task/predict
2025-12-10T01:48:55,492   copying src/boltzgen/task/predict/data_from_generated.py -> build/lib/boltzgen/task/predict
2025-12-10T01:48:55,495   copying src/boltzgen/task/predict/predict.py -> build/lib/boltzgen/task/predict
2025-12-10T01:48:55,498   copying src/boltzgen/task/predict/data_protein_binder.py -> build/lib/boltzgen/task/predict
2025-12-10T01:48:55,501   copying src/boltzgen/task/predict/__init__.py -> build/lib/boltzgen/task/predict
2025-12-10T01:48:55,502   copying src/boltzgen/task/predict/data_ligands.py -> build/lib/boltzgen/task/predict
2025-12-10T01:48:55,505   copying src/boltzgen/task/predict/data_from_yaml.py -> build/lib/boltzgen/task/predict
2025-12-10T01:48:55,507   copying src/boltzgen/task/predict/writer.py -> build/lib/boltzgen/task/predict
2025-12-10T01:48:55,510   copying src/boltzgen/task/predict/loading_utils.py -> build/lib/boltzgen/task/predict
2025-12-10T01:48:55,513   creating build/lib/boltzgen/task/analyze
2025-12-10T01:48:55,514   copying src/boltzgen/task/analyze/analyze.py -> build/lib/boltzgen/task/analyze
2025-12-10T01:48:55,518   copying src/boltzgen/task/analyze/analyze_utils.py -> build/lib/boltzgen/task/analyze
2025-12-10T01:48:55,522   creating build/lib/boltzgen/data/feature
2025-12-10T01:48:55,523   copying src/boltzgen/data/feature/__init__.py -> build/lib/boltzgen/data/feature
2025-12-10T01:48:55,525   copying src/boltzgen/data/feature/featurizer.py -> build/lib/boltzgen/data/feature
2025-12-10T01:48:55,530   creating build/lib/boltzgen/data/template
2025-12-10T01:48:55,532   copying src/boltzgen/data/template/__init__.py -> build/lib/boltzgen/data/template
2025-12-10T01:48:55,534   copying src/boltzgen/data/template/features.py -> build/lib/boltzgen/data/template
2025-12-10T01:48:55,536   creating build/lib/boltzgen/data/tokenize
2025-12-10T01:48:55,537   copying src/boltzgen/data/tokenize/__init__.py -> build/lib/boltzgen/data/tokenize
2025-12-10T01:48:55,539   copying src/boltzgen/data/tokenize/tokenizer.py -> build/lib/boltzgen/data/tokenize
2025-12-10T01:48:55,542   creating build/lib/boltzgen/data/filter
2025-12-10T01:48:55,543   copying src/boltzgen/data/filter/__init__.py -> build/lib/boltzgen/data/filter
2025-12-10T01:48:55,545   creating build/lib/boltzgen/data/write
2025-12-10T01:48:55,546   copying src/boltzgen/data/write/__init__.py -> build/lib/boltzgen/data/write
2025-12-10T01:48:55,548   copying src/boltzgen/data/write/mmcif.py -> build/lib/boltzgen/data/write
2025-12-10T01:48:55,551   copying src/boltzgen/data/write/pdb.py -> build/lib/boltzgen/data/write
2025-12-10T01:48:55,554   creating build/lib/boltzgen/data/sample
2025-12-10T01:48:55,555   copying src/boltzgen/data/sample/cluster.py -> build/lib/boltzgen/data/sample
2025-12-10T01:48:55,558   copying src/boltzgen/data/sample/sampler.py -> build/lib/boltzgen/data/sample
2025-12-10T01:48:55,560   copying src/boltzgen/data/sample/__init__.py -> build/lib/boltzgen/data/sample
2025-12-10T01:48:55,562   creating build/lib/boltzgen/data/crop
2025-12-10T01:48:55,563   copying src/boltzgen/data/crop/cropper.py -> build/lib/boltzgen/data/crop
2025-12-10T01:48:55,565   copying src/boltzgen/data/crop/multimer.py -> build/lib/boltzgen/data/crop
2025-12-10T01:48:55,568   copying src/boltzgen/data/crop/__init__.py -> build/lib/boltzgen/data/crop
2025-12-10T01:48:55,570   creating build/lib/boltzgen/data/select
2025-12-10T01:48:55,571   copying src/boltzgen/data/select/selector.py -> build/lib/boltzgen/data/select
2025-12-10T01:48:55,573   copying src/boltzgen/data/select/protein.py -> build/lib/boltzgen/data/select
2025-12-10T01:48:55,577   copying src/boltzgen/data/select/__init__.py -> build/lib/boltzgen/data/select
2025-12-10T01:48:55,579   creating build/lib/boltzgen/data/parse
2025-12-10T01:48:55,580   copying src/boltzgen/data/parse/schema.py -> build/lib/boltzgen/data/parse
2025-12-10T01:48:55,584   copying src/boltzgen/data/parse/pdb_parser.py -> build/lib/boltzgen/data/parse
2025-12-10T01:48:55,586   copying src/boltzgen/data/parse/__init__.py -> build/lib/boltzgen/data/parse
2025-12-10T01:48:55,588   copying src/boltzgen/data/parse/a3m.py -> build/lib/boltzgen/data/parse
2025-12-10T01:48:55,590   copying src/boltzgen/data/parse/mmcif.py -> build/lib/boltzgen/data/parse
2025-12-10T01:48:55,594   creating build/lib/boltzgen/data/filter/dynamic
2025-12-10T01:48:55,595   copying src/boltzgen/data/filter/dynamic/error.py -> build/lib/boltzgen/data/filter/dynamic
2025-12-10T01:48:55,597   copying src/boltzgen/data/filter/dynamic/max_residues.py -> build/lib/boltzgen/data/filter/dynamic
2025-12-10T01:48:55,599   copying src/boltzgen/data/filter/dynamic/filter.py -> build/lib/boltzgen/data/filter/dynamic
2025-12-10T01:48:55,601   copying src/boltzgen/data/filter/dynamic/min_protein_residues.py -> build/lib/boltzgen/data/filter/dynamic
2025-12-10T01:48:55,603   copying src/boltzgen/data/filter/dynamic/size.py -> build/lib/boltzgen/data/filter/dynamic
2025-12-10T01:48:55,605   copying src/boltzgen/data/filter/dynamic/__init__.py -> build/lib/boltzgen/data/filter/dynamic
2025-12-10T01:48:55,607   copying src/boltzgen/data/filter/dynamic/resolution.py -> build/lib/boltzgen/data/filter/dynamic
2025-12-10T01:48:55,609   copying src/boltzgen/data/filter/dynamic/pdb_id_txtfile.py -> build/lib/boltzgen/data/filter/dynamic
2025-12-10T01:48:55,611   copying src/boltzgen/data/filter/dynamic/confidence.py -> build/lib/boltzgen/data/filter/dynamic
2025-12-10T01:48:55,613   copying src/boltzgen/data/filter/dynamic/date.py -> build/lib/boltzgen/data/filter/dynamic
2025-12-10T01:48:55,615   creating build/lib/boltzgen/data/filter/static
2025-12-10T01:48:55,616   copying src/boltzgen/data/filter/static/filter.py -> build/lib/boltzgen/data/filter/static
2025-12-10T01:48:55,619   copying src/boltzgen/data/filter/static/__init__.py -> build/lib/boltzgen/data/filter/static
2025-12-10T01:48:55,620   copying src/boltzgen/data/filter/static/ligand.py -> build/lib/boltzgen/data/filter/static
2025-12-10T01:48:55,622   copying src/boltzgen/data/filter/static/polymer.py -> build/lib/boltzgen/data/filter/static
2025-12-10T01:48:55,625   running egg_info
2025-12-10T01:48:55,637   writing src/boltzgen.egg-info/PKG-INFO
2025-12-10T01:48:55,643   writing dependency_links to src/boltzgen.egg-info/dependency_links.txt
2025-12-10T01:48:55,645   writing entry points to src/boltzgen.egg-info/entry_points.txt
2025-12-10T01:48:55,649   writing requirements to src/boltzgen.egg-info/requires.txt
2025-12-10T01:48:55,650   writing top-level names to src/boltzgen.egg-info/top_level.txt
2025-12-10T01:48:55,688   reading manifest file 'src/boltzgen.egg-info/SOURCES.txt'
2025-12-10T01:48:55,696   adding license file 'LICENSE'
2025-12-10T01:48:55,704   writing manifest file 'src/boltzgen.egg-info/SOURCES.txt'
2025-12-10T01:48:55,724   creating build/lib/boltzgen/resources/config
2025-12-10T01:48:55,725   copying src/boltzgen/resources/config/analysis.yaml -> build/lib/boltzgen/resources/config
2025-12-10T01:48:55,727   copying src/boltzgen/resources/config/fold.yaml -> build/lib/boltzgen/resources/config
2025-12-10T01:48:55,730   copying src/boltzgen/resources/config/design.yaml -> build/lib/boltzgen/resources/config
2025-12-10T01:48:55,732   copying src/boltzgen/resources/config/inverse_fold.yaml -> build/lib/boltzgen/resources/config
2025-12-10T01:48:55,735   copying src/boltzgen/resources/config/affinity.yaml -> build/lib/boltzgen/resources/config
2025-12-10T01:48:55,737   copying src/boltzgen/resources/config/filtering.yaml -> build/lib/boltzgen/resources/config
2025-12-10T01:48:55,739   copying src/boltzgen/resources/config/inverse_fold_only.yaml -> build/lib/boltzgen/resources/config
2025-12-10T01:48:55,742   creating build/lib/boltzgen/resources/config/train
2025-12-10T01:48:55,743   copying src/boltzgen/resources/config/train/boltzgen_small.yaml -> build/lib/boltzgen/resources/config/train
2025-12-10T01:48:55,746   copying src/boltzgen/resources/config/train/inverse_folding.yaml -> build/lib/boltzgen/resources/config/train
2025-12-10T01:48:55,749   copying src/boltzgen/resources/config/train/boltzgen.yaml -> build/lib/boltzgen/resources/config/train
2025-12-10T01:48:55,781   installing to build/bdist.linux-armv7l/wheel
2025-12-10T01:48:55,782   running install
2025-12-10T01:48:55,805   running install_lib
2025-12-10T01:48:55,811   creating build/bdist.linux-armv7l/wheel
2025-12-10T01:48:55,814   creating build/bdist.linux-armv7l/wheel/boltzgen
2025-12-10T01:48:55,816   creating build/bdist.linux-armv7l/wheel/boltzgen/model
2025-12-10T01:48:55,818   creating build/bdist.linux-armv7l/wheel/boltzgen/model/models
2025-12-10T01:48:55,819   copying build/lib/boltzgen/model/models/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/models
2025-12-10T01:48:55,821   copying build/lib/boltzgen/model/models/boltz.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/models
2025-12-10T01:48:55,825   creating build/bdist.linux-armv7l/wheel/boltzgen/model/modules
2025-12-10T01:48:55,826   copying build/lib/boltzgen/model/modules/masker.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/modules
2025-12-10T01:48:55,829   copying build/lib/boltzgen/model/modules/inverse_fold.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/modules
2025-12-10T01:48:55,832   copying build/lib/boltzgen/model/modules/scatter_utils.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/modules
2025-12-10T01:48:55,834   copying build/lib/boltzgen/model/modules/utils.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/modules
2025-12-10T01:48:55,837   copying build/lib/boltzgen/model/modules/encoders.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/modules
2025-12-10T01:48:55,840   copying build/lib/boltzgen/model/modules/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/modules
2025-12-10T01:48:55,841   copying build/lib/boltzgen/model/modules/trunk.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/modules
2025-12-10T01:48:55,844   copying build/lib/boltzgen/model/modules/confidence.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/modules
2025-12-10T01:48:55,847   copying build/lib/boltzgen/model/modules/diffusion.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/modules
2025-12-10T01:48:55,850   copying build/lib/boltzgen/model/modules/transformers.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/modules
2025-12-10T01:48:55,853   copying build/lib/boltzgen/model/modules/affinity.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/modules
2025-12-10T01:48:55,855   copying build/lib/boltzgen/model/modules/diffusion_conditioning.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/modules
2025-12-10T01:48:55,857   copying build/lib/boltzgen/model/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model
2025-12-10T01:48:55,859   creating build/bdist.linux-armv7l/wheel/boltzgen/model/optim
2025-12-10T01:48:55,860   copying build/lib/boltzgen/model/optim/ema.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/optim
2025-12-10T01:48:55,863   copying build/lib/boltzgen/model/optim/scheduler.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/optim
2025-12-10T01:48:55,865   copying build/lib/boltzgen/model/optim/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/optim
2025-12-10T01:48:55,867   creating build/bdist.linux-armv7l/wheel/boltzgen/model/layers
2025-12-10T01:48:55,868   copying build/lib/boltzgen/model/layers/initialize.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers
2025-12-10T01:48:55,870   copying build/lib/boltzgen/model/layers/triangular.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers
2025-12-10T01:48:55,873   copying build/lib/boltzgen/model/layers/outer_product_mean.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers
2025-12-10T01:48:55,875   copying build/lib/boltzgen/model/layers/transition.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers
2025-12-10T01:48:55,877   copying build/lib/boltzgen/model/layers/pairformer.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers
2025-12-10T01:48:55,879   copying build/lib/boltzgen/model/layers/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers
2025-12-10T01:48:55,881   copying build/lib/boltzgen/model/layers/attention.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers
2025-12-10T01:48:55,883   creating build/bdist.linux-armv7l/wheel/boltzgen/model/layers/triangular_attention
2025-12-10T01:48:55,884   copying build/lib/boltzgen/model/layers/triangular_attention/utils.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers/triangular_attention
2025-12-10T01:48:55,887   copying build/lib/boltzgen/model/layers/triangular_attention/primitives.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers/triangular_attention
2025-12-10T01:48:55,890   copying build/lib/boltzgen/model/layers/triangular_attention/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers/triangular_attention
2025-12-10T01:48:55,892   copying build/lib/boltzgen/model/layers/triangular_attention/attention.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers/triangular_attention
2025-12-10T01:48:55,894   copying build/lib/boltzgen/model/layers/miniformer.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers
2025-12-10T01:48:55,896   copying build/lib/boltzgen/model/layers/relative.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers
2025-12-10T01:48:55,898   copying build/lib/boltzgen/model/layers/pair_averaging.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers
2025-12-10T01:48:55,900   copying build/lib/boltzgen/model/layers/dropout.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers
2025-12-10T01:48:55,902   copying build/lib/boltzgen/model/layers/confidence_utils.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers
2025-12-10T01:48:55,905   creating build/bdist.linux-armv7l/wheel/boltzgen/model/validation
2025-12-10T01:48:55,906   copying build/lib/boltzgen/model/validation/design.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/validation
2025-12-10T01:48:55,909   copying build/lib/boltzgen/model/validation/validator.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/validation
2025-12-10T01:48:55,912   copying build/lib/boltzgen/model/validation/rcsb.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/validation
2025-12-10T01:48:55,914   copying build/lib/boltzgen/model/validation/refolding.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/validation
2025-12-10T01:48:55,917   creating build/bdist.linux-armv7l/wheel/boltzgen/model/loss
2025-12-10T01:48:55,918   copying build/lib/boltzgen/model/loss/validation.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/loss
2025-12-10T01:48:55,921   copying build/lib/boltzgen/model/loss/bfactor.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/loss
2025-12-10T01:48:55,923   copying build/lib/boltzgen/model/loss/distogram.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/loss
2025-12-10T01:48:55,925   copying build/lib/boltzgen/model/loss/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/loss
2025-12-10T01:48:55,927   copying build/lib/boltzgen/model/loss/confidence.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/loss
2025-12-10T01:48:55,930   copying build/lib/boltzgen/model/loss/diffusion.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/loss
2025-12-10T01:48:55,932   copying build/lib/boltzgen/model/loss/res_type.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/loss
2025-12-10T01:48:55,935   creating build/bdist.linux-armv7l/wheel/boltzgen/task
2025-12-10T01:48:55,937   creating build/bdist.linux-armv7l/wheel/boltzgen/task/train
2025-12-10T01:48:55,938   copying build/lib/boltzgen/task/train/data.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/train
2025-12-10T01:48:55,941   copying build/lib/boltzgen/task/train/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/train
2025-12-10T01:48:55,943   copying build/lib/boltzgen/task/train/train.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/train
2025-12-10T01:48:55,945   copying build/lib/boltzgen/task/task.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task
2025-12-10T01:48:55,948   creating build/bdist.linux-armv7l/wheel/boltzgen/task/filter
2025-12-10T01:48:55,949   copying build/lib/boltzgen/task/filter/filter.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/filter
2025-12-10T01:48:55,953   copying build/lib/boltzgen/task/filter/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/filter
2025-12-10T01:48:55,954   copying build/lib/boltzgen/task/filter/seqplot_utils.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/filter
2025-12-10T01:48:55,957   copying build/lib/boltzgen/task/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task
2025-12-10T01:48:55,959   creating build/bdist.linux-armv7l/wheel/boltzgen/task/predict
2025-12-10T01:48:55,960   copying build/lib/boltzgen/task/predict/data_from_generated.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/predict
2025-12-10T01:48:55,964   copying build/lib/boltzgen/task/predict/predict.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/predict
2025-12-10T01:48:55,966   copying build/lib/boltzgen/task/predict/data_protein_binder.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/predict
2025-12-10T01:48:55,969   copying build/lib/boltzgen/task/predict/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/predict
2025-12-10T01:48:55,971   copying build/lib/boltzgen/task/predict/data_ligands.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/predict
2025-12-10T01:48:55,973   copying build/lib/boltzgen/task/predict/data_from_yaml.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/predict
2025-12-10T01:48:55,976   copying build/lib/boltzgen/task/predict/writer.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/predict
2025-12-10T01:48:55,979   copying build/lib/boltzgen/task/predict/loading_utils.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/predict
2025-12-10T01:48:55,981   creating build/bdist.linux-armv7l/wheel/boltzgen/task/analyze
2025-12-10T01:48:55,982   copying build/lib/boltzgen/task/analyze/analyze.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/analyze
2025-12-10T01:48:55,986   copying build/lib/boltzgen/task/analyze/analyze_utils.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/analyze
2025-12-10T01:48:55,990   creating build/bdist.linux-armv7l/wheel/boltzgen/resources
2025-12-10T01:48:55,991   copying build/lib/boltzgen/resources/main.py -> build/bdist.linux-armv7l/wheel/./boltzgen/resources
2025-12-10T01:48:55,994   creating build/bdist.linux-armv7l/wheel/boltzgen/resources/config
2025-12-10T01:48:55,996   creating build/bdist.linux-armv7l/wheel/boltzgen/resources/config/train
2025-12-10T01:48:55,997   copying build/lib/boltzgen/resources/config/train/boltzgen_small.yaml -> build/bdist.linux-armv7l/wheel/./boltzgen/resources/config/train
2025-12-10T01:48:55,999   copying build/lib/boltzgen/resources/config/train/inverse_folding.yaml -> build/bdist.linux-armv7l/wheel/./boltzgen/resources/config/train
2025-12-10T01:48:56,002   copying build/lib/boltzgen/resources/config/train/boltzgen.yaml -> build/bdist.linux-armv7l/wheel/./boltzgen/resources/config/train
2025-12-10T01:48:56,004   copying build/lib/boltzgen/resources/config/analysis.yaml -> build/bdist.linux-armv7l/wheel/./boltzgen/resources/config
2025-12-10T01:48:56,006   copying build/lib/boltzgen/resources/config/fold.yaml -> build/bdist.linux-armv7l/wheel/./boltzgen/resources/config
2025-12-10T01:48:56,008   copying build/lib/boltzgen/resources/config/design.yaml -> build/bdist.linux-armv7l/wheel/./boltzgen/resources/config
2025-12-10T01:48:56,010   copying build/lib/boltzgen/resources/config/inverse_fold.yaml -> build/bdist.linux-armv7l/wheel/./boltzgen/resources/config
2025-12-10T01:48:56,012   copying build/lib/boltzgen/resources/config/affinity.yaml -> build/bdist.linux-armv7l/wheel/./boltzgen/resources/config
2025-12-10T01:48:56,014   copying build/lib/boltzgen/resources/config/filtering.yaml -> build/bdist.linux-armv7l/wheel/./boltzgen/resources/config
2025-12-10T01:48:56,016   copying build/lib/boltzgen/resources/config/inverse_fold_only.yaml -> build/bdist.linux-armv7l/wheel/./boltzgen/resources/config
2025-12-10T01:48:56,018   copying build/lib/boltzgen/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen
2025-12-10T01:48:56,020   creating build/bdist.linux-armv7l/wheel/boltzgen/data
2025-12-10T01:48:56,022   creating build/bdist.linux-armv7l/wheel/boltzgen/data/feature
2025-12-10T01:48:56,023   copying build/lib/boltzgen/data/feature/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/feature
2025-12-10T01:48:56,025   copying build/lib/boltzgen/data/feature/featurizer.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/feature
2025-12-10T01:48:56,029   copying build/lib/boltzgen/data/const.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data
2025-12-10T01:48:56,033   creating build/bdist.linux-armv7l/wheel/boltzgen/data/template
2025-12-10T01:48:56,034   copying build/lib/boltzgen/data/template/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/template
2025-12-10T01:48:56,036   copying build/lib/boltzgen/data/template/features.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/template
2025-12-10T01:48:56,038   copying build/lib/boltzgen/data/rmsd_computation.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data
2025-12-10T01:48:56,040   copying build/lib/boltzgen/data/pad.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data
2025-12-10T01:48:56,043   creating build/bdist.linux-armv7l/wheel/boltzgen/data/tokenize
2025-12-10T01:48:56,044   copying build/lib/boltzgen/data/tokenize/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/tokenize
2025-12-10T01:48:56,046   copying build/lib/boltzgen/data/tokenize/tokenizer.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/tokenize
2025-12-10T01:48:56,048   copying build/lib/boltzgen/data/data.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data
2025-12-10T01:48:56,053   creating build/bdist.linux-armv7l/wheel/boltzgen/data/filter
2025-12-10T01:48:56,054   creating build/bdist.linux-armv7l/wheel/boltzgen/data/filter/dynamic
2025-12-10T01:48:56,056   copying build/lib/boltzgen/data/filter/dynamic/error.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter/dynamic
2025-12-10T01:48:56,057   copying build/lib/boltzgen/data/filter/dynamic/max_residues.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter/dynamic
2025-12-10T01:48:56,059   copying build/lib/boltzgen/data/filter/dynamic/filter.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter/dynamic
2025-12-10T01:48:56,061   copying build/lib/boltzgen/data/filter/dynamic/min_protein_residues.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter/dynamic
2025-12-10T01:48:56,063   copying build/lib/boltzgen/data/filter/dynamic/size.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter/dynamic
2025-12-10T01:48:56,065   copying build/lib/boltzgen/data/filter/dynamic/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter/dynamic
2025-12-10T01:48:56,066   copying build/lib/boltzgen/data/filter/dynamic/resolution.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter/dynamic
2025-12-10T01:48:56,068   copying build/lib/boltzgen/data/filter/dynamic/pdb_id_txtfile.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter/dynamic
2025-12-10T01:48:56,070   copying build/lib/boltzgen/data/filter/dynamic/confidence.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter/dynamic
2025-12-10T01:48:56,072   copying build/lib/boltzgen/data/filter/dynamic/date.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter/dynamic
2025-12-10T01:48:56,074   creating build/bdist.linux-armv7l/wheel/boltzgen/data/filter/static
2025-12-10T01:48:56,075   copying build/lib/boltzgen/data/filter/static/filter.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter/static
2025-12-10T01:48:56,077   copying build/lib/boltzgen/data/filter/static/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter/static
2025-12-10T01:48:56,079   copying build/lib/boltzgen/data/filter/static/ligand.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter/static
2025-12-10T01:48:56,081   copying build/lib/boltzgen/data/filter/static/polymer.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter/static
2025-12-10T01:48:56,083   copying build/lib/boltzgen/data/filter/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter
2025-12-10T01:48:56,085   copying build/lib/boltzgen/data/mol.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data
2025-12-10T01:48:56,088   copying build/lib/boltzgen/data/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data
2025-12-10T01:48:56,090   creating build/bdist.linux-armv7l/wheel/boltzgen/data/write
2025-12-10T01:48:56,091   copying build/lib/boltzgen/data/write/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/write
2025-12-10T01:48:56,093   copying build/lib/boltzgen/data/write/mmcif.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/write
2025-12-10T01:48:56,095   copying build/lib/boltzgen/data/write/pdb.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/write
2025-12-10T01:48:56,098   creating build/bdist.linux-armv7l/wheel/boltzgen/data/sample
2025-12-10T01:48:56,099   copying build/lib/boltzgen/data/sample/cluster.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/sample
2025-12-10T01:48:56,102   copying build/lib/boltzgen/data/sample/sampler.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/sample
2025-12-10T01:48:56,104   copying build/lib/boltzgen/data/sample/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/sample
2025-12-10T01:48:56,106   creating build/bdist.linux-armv7l/wheel/boltzgen/data/crop
2025-12-10T01:48:56,107   copying build/lib/boltzgen/data/crop/cropper.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/crop
2025-12-10T01:48:56,109   copying build/lib/boltzgen/data/crop/multimer.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/crop
2025-12-10T01:48:56,111   copying build/lib/boltzgen/data/crop/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/crop
2025-12-10T01:48:56,114   creating build/bdist.linux-armv7l/wheel/boltzgen/data/select
2025-12-10T01:48:56,115   copying build/lib/boltzgen/data/select/selector.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/select
2025-12-10T01:48:56,117   copying build/lib/boltzgen/data/select/protein.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/select
2025-12-10T01:48:56,120   copying build/lib/boltzgen/data/select/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/select
2025-12-10T01:48:56,122   creating build/bdist.linux-armv7l/wheel/boltzgen/data/parse
2025-12-10T01:48:56,123   copying build/lib/boltzgen/data/parse/schema.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/parse
2025-12-10T01:48:56,127   copying build/lib/boltzgen/data/parse/pdb_parser.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/parse
2025-12-10T01:48:56,129   copying build/lib/boltzgen/data/parse/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/parse
2025-12-10T01:48:56,131   copying build/lib/boltzgen/data/parse/a3m.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/parse
2025-12-10T01:48:56,132   copying build/lib/boltzgen/data/parse/mmcif.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/parse
2025-12-10T01:48:56,136   creating build/bdist.linux-armv7l/wheel/boltzgen/cli
2025-12-10T01:48:56,137   copying build/lib/boltzgen/cli/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/cli
2025-12-10T01:48:56,139   copying build/lib/boltzgen/cli/boltzgen.py -> build/bdist.linux-armv7l/wheel/./boltzgen/cli
2025-12-10T01:48:56,143   creating build/bdist.linux-armv7l/wheel/boltzgen/utils
2025-12-10T01:48:56,144   copying build/lib/boltzgen/utils/pipeline_progress_bar.py -> build/bdist.linux-armv7l/wheel/./boltzgen/utils
2025-12-10T01:48:56,146   copying build/lib/boltzgen/utils/quiet.py -> build/bdist.linux-armv7l/wheel/./boltzgen/utils
2025-12-10T01:48:56,148   copying build/lib/boltzgen/utils/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/utils
2025-12-10T01:48:56,150   running install_egg_info
2025-12-10T01:48:56,155   Copying src/boltzgen.egg-info to build/bdist.linux-armv7l/wheel/./boltzgen-0.1.9-py3.11.egg-info
2025-12-10T01:48:56,168   running install_scripts
2025-12-10T01:48:56,181   creating build/bdist.linux-armv7l/wheel/boltzgen-0.1.9.dist-info/WHEEL
2025-12-10T01:48:56,184   creating '/tmp/pip-wheel-2o9zgqln/.tmp-2ltvpw_v/boltzgen-0.1.9-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2025-12-10T01:48:56,186   adding 'boltzgen/__init__.py'
2025-12-10T01:48:56,188   adding 'boltzgen/cli/__init__.py'
2025-12-10T01:48:56,195   adding 'boltzgen/cli/boltzgen.py'
2025-12-10T01:48:56,198   adding 'boltzgen/data/__init__.py'
2025-12-10T01:48:56,206   adding 'boltzgen/data/const.py'
2025-12-10T01:48:56,215   adding 'boltzgen/data/data.py'
2025-12-10T01:48:56,219   adding 'boltzgen/data/mol.py'
2025-12-10T01:48:56,221   adding 'boltzgen/data/pad.py'
2025-12-10T01:48:56,223   adding 'boltzgen/data/rmsd_computation.py'
2025-12-10T01:48:56,224   adding 'boltzgen/data/crop/__init__.py'
2025-12-10T01:48:56,226   adding 'boltzgen/data/crop/cropper.py'
2025-12-10T01:48:56,228   adding 'boltzgen/data/crop/multimer.py'
2025-12-10T01:48:56,230   adding 'boltzgen/data/feature/__init__.py'
2025-12-10T01:48:56,239   adding 'boltzgen/data/feature/featurizer.py'
2025-12-10T01:48:56,241   adding 'boltzgen/data/filter/__init__.py'
2025-12-10T01:48:56,243   adding 'boltzgen/data/filter/dynamic/__init__.py'
2025-12-10T01:48:56,244   adding 'boltzgen/data/filter/dynamic/confidence.py'
2025-12-10T01:48:56,246   adding 'boltzgen/data/filter/dynamic/date.py'
2025-12-10T01:48:56,247   adding 'boltzgen/data/filter/dynamic/error.py'
2025-12-10T01:48:56,248   adding 'boltzgen/data/filter/dynamic/filter.py'
2025-12-10T01:48:56,249   adding 'boltzgen/data/filter/dynamic/max_residues.py'
2025-12-10T01:48:56,250   adding 'boltzgen/data/filter/dynamic/min_protein_residues.py'
2025-12-10T01:48:56,252   adding 'boltzgen/data/filter/dynamic/pdb_id_txtfile.py'
2025-12-10T01:48:56,253   adding 'boltzgen/data/filter/dynamic/resolution.py'
2025-12-10T01:48:56,254   adding 'boltzgen/data/filter/dynamic/size.py'
2025-12-10T01:48:56,256   adding 'boltzgen/data/filter/static/__init__.py'
2025-12-10T01:48:56,257   adding 'boltzgen/data/filter/static/filter.py'
2025-12-10T01:48:56,258   adding 'boltzgen/data/filter/static/ligand.py'
2025-12-10T01:48:56,260   adding 'boltzgen/data/filter/static/polymer.py'
2025-12-10T01:48:56,262   adding 'boltzgen/data/parse/__init__.py'
2025-12-10T01:48:56,263   adding 'boltzgen/data/parse/a3m.py'
2025-12-10T01:48:56,269   adding 'boltzgen/data/parse/mmcif.py'
2025-12-10T01:48:56,271   adding 'boltzgen/data/parse/pdb_parser.py'
2025-12-10T01:48:56,279   adding 'boltzgen/data/parse/schema.py'
2025-12-10T01:48:56,281   adding 'boltzgen/data/sample/__init__.py'
2025-12-10T01:48:56,283   adding 'boltzgen/data/sample/cluster.py'
2025-12-10T01:48:56,284   adding 'boltzgen/data/sample/sampler.py'
2025-12-10T01:48:56,285   adding 'boltzgen/data/select/__init__.py'
2025-12-10T01:48:56,288   adding 'boltzgen/data/select/protein.py'
2025-12-10T01:48:56,290   adding 'boltzgen/data/select/selector.py'
2025-12-10T01:48:56,292   adding 'boltzgen/data/template/__init__.py'
2025-12-10T01:48:56,293   adding 'boltzgen/data/template/features.py'
2025-12-10T01:48:56,294   adding 'boltzgen/data/tokenize/__init__.py'
2025-12-10T01:48:56,296   adding 'boltzgen/data/tokenize/tokenizer.py'
2025-12-10T01:48:56,298   adding 'boltzgen/data/write/__init__.py'
2025-12-10T01:48:56,300   adding 'boltzgen/data/write/mmcif.py'
2025-12-10T01:48:56,302   adding 'boltzgen/data/write/pdb.py'
2025-12-10T01:48:56,304   adding 'boltzgen/model/__init__.py'
2025-12-10T01:48:56,305   adding 'boltzgen/model/layers/__init__.py'
2025-12-10T01:48:56,307   adding 'boltzgen/model/layers/attention.py'
2025-12-10T01:48:56,309   adding 'boltzgen/model/layers/confidence_utils.py'
2025-12-10T01:48:56,310   adding 'boltzgen/model/layers/dropout.py'
2025-12-10T01:48:56,311   adding 'boltzgen/model/layers/initialize.py'
2025-12-10T01:48:56,313   adding 'boltzgen/model/layers/miniformer.py'
2025-12-10T01:48:56,314   adding 'boltzgen/model/layers/outer_product_mean.py'
2025-12-10T01:48:56,316   adding 'boltzgen/model/layers/pair_averaging.py'
2025-12-10T01:48:56,317   adding 'boltzgen/model/layers/pairformer.py'
2025-12-10T01:48:56,318   adding 'boltzgen/model/layers/relative.py'
2025-12-10T01:48:56,320   adding 'boltzgen/model/layers/transition.py'
2025-12-10T01:48:56,321   adding 'boltzgen/model/layers/triangular.py'
2025-12-10T01:48:56,323   adding 'boltzgen/model/layers/triangular_attention/__init__.py'
2025-12-10T01:48:56,325   adding 'boltzgen/model/layers/triangular_attention/attention.py'
2025-12-10T01:48:56,327   adding 'boltzgen/model/layers/triangular_attention/primitives.py'
2025-12-10T01:48:56,329   adding 'boltzgen/model/layers/triangular_attention/utils.py'
2025-12-10T01:48:56,331   adding 'boltzgen/model/loss/__init__.py'
2025-12-10T01:48:56,332   adding 'boltzgen/model/loss/bfactor.py'
2025-12-10T01:48:56,334   adding 'boltzgen/model/loss/confidence.py'
2025-12-10T01:48:56,336   adding 'boltzgen/model/loss/diffusion.py'
2025-12-10T01:48:56,338   adding 'boltzgen/model/loss/distogram.py'
2025-12-10T01:48:56,339   adding 'boltzgen/model/loss/res_type.py'
2025-12-10T01:48:56,344   adding 'boltzgen/model/loss/validation.py'
2025-12-10T01:48:56,346   adding 'boltzgen/model/models/__init__.py'
2025-12-10T01:48:56,352   adding 'boltzgen/model/models/boltz.py'
2025-12-10T01:48:56,354   adding 'boltzgen/model/modules/__init__.py'
2025-12-10T01:48:56,356   adding 'boltzgen/model/modules/affinity.py'
2025-12-10T01:48:56,358   adding 'boltzgen/model/modules/confidence.py'
2025-12-10T01:48:56,362   adding 'boltzgen/model/modules/diffusion.py'
2025-12-10T01:48:56,363   adding 'boltzgen/model/modules/diffusion_conditioning.py'
2025-12-10T01:48:56,366   adding 'boltzgen/model/modules/encoders.py'
2025-12-10T01:48:56,369   adding 'boltzgen/model/modules/inverse_fold.py'
2025-12-10T01:48:56,371   adding 'boltzgen/model/modules/masker.py'
2025-12-10T01:48:56,372   adding 'boltzgen/model/modules/scatter_utils.py'
2025-12-10T01:48:56,374   adding 'boltzgen/model/modules/transformers.py'
2025-12-10T01:48:56,376   adding 'boltzgen/model/modules/trunk.py'
2025-12-10T01:48:56,378   adding 'boltzgen/model/modules/utils.py'
2025-12-10T01:48:56,380   adding 'boltzgen/model/optim/__init__.py'
2025-12-10T01:48:56,382   adding 'boltzgen/model/optim/ema.py'
2025-12-10T01:48:56,383   adding 'boltzgen/model/optim/scheduler.py'
2025-12-10T01:48:56,386   adding 'boltzgen/model/validation/design.py'
2025-12-10T01:48:56,387   adding 'boltzgen/model/validation/rcsb.py'
2025-12-10T01:48:56,389   adding 'boltzgen/model/validation/refolding.py'
2025-12-10T01:48:56,392   adding 'boltzgen/model/validation/validator.py'
2025-12-10T01:48:56,394   adding 'boltzgen/resources/main.py'
2025-12-10T01:48:56,395   adding 'boltzgen/resources/config/affinity.yaml'
2025-12-10T01:48:56,397   adding 'boltzgen/resources/config/analysis.yaml'
2025-12-10T01:48:56,398   adding 'boltzgen/resources/config/design.yaml'
2025-12-10T01:48:56,399   adding 'boltzgen/resources/config/filtering.yaml'
2025-12-10T01:48:56,401   adding 'boltzgen/resources/config/fold.yaml'
2025-12-10T01:48:56,402   adding 'boltzgen/resources/config/inverse_fold.yaml'
2025-12-10T01:48:56,403   adding 'boltzgen/resources/config/inverse_fold_only.yaml'
2025-12-10T01:48:56,406   adding 'boltzgen/resources/config/train/boltzgen.yaml'
2025-12-10T01:48:56,408   adding 'boltzgen/resources/config/train/boltzgen_small.yaml'
2025-12-10T01:48:56,410   adding 'boltzgen/resources/config/train/inverse_folding.yaml'
2025-12-10T01:48:56,412   adding 'boltzgen/task/__init__.py'
2025-12-10T01:48:56,413   adding 'boltzgen/task/task.py'
2025-12-10T01:48:56,419   adding 'boltzgen/task/analyze/analyze.py'
2025-12-10T01:48:56,425   adding 'boltzgen/task/analyze/analyze_utils.py'
2025-12-10T01:48:56,427   adding 'boltzgen/task/filter/__init__.py'
2025-12-10T01:48:56,432   adding 'boltzgen/task/filter/filter.py'
2025-12-10T01:48:56,435   adding 'boltzgen/task/filter/seqplot_utils.py'
2025-12-10T01:48:56,437   adding 'boltzgen/task/predict/__init__.py'
2025-12-10T01:48:56,441   adding 'boltzgen/task/predict/data_from_generated.py'
2025-12-10T01:48:56,443   adding 'boltzgen/task/predict/data_from_yaml.py'
2025-12-10T01:48:56,446   adding 'boltzgen/task/predict/data_ligands.py'
2025-12-10T01:48:56,448   adding 'boltzgen/task/predict/data_protein_binder.py'
2025-12-10T01:48:56,450   adding 'boltzgen/task/predict/loading_utils.py'
2025-12-10T01:48:56,452   adding 'boltzgen/task/predict/predict.py'
2025-12-10T01:48:56,454   adding 'boltzgen/task/predict/writer.py'
2025-12-10T01:48:56,456   adding 'boltzgen/task/train/__init__.py'
2025-12-10T01:48:56,460   adding 'boltzgen/task/train/data.py'
2025-12-10T01:48:56,462   adding 'boltzgen/task/train/train.py'
2025-12-10T01:48:56,464   adding 'boltzgen/utils/__init__.py'
2025-12-10T01:48:56,465   adding 'boltzgen/utils/pipeline_progress_bar.py'
2025-12-10T01:48:56,466   adding 'boltzgen/utils/quiet.py'
2025-12-10T01:48:56,469   adding 'boltzgen-0.1.9.dist-info/licenses/LICENSE'
2025-12-10T01:48:56,470   adding 'boltzgen-0.1.9.dist-info/METADATA'
2025-12-10T01:48:56,472   adding 'boltzgen-0.1.9.dist-info/WHEEL'
2025-12-10T01:48:56,473   adding 'boltzgen-0.1.9.dist-info/entry_points.txt'
2025-12-10T01:48:56,474   adding 'boltzgen-0.1.9.dist-info/top_level.txt'
2025-12-10T01:48:56,476   adding 'boltzgen-0.1.9.dist-info/RECORD'
2025-12-10T01:48:56,482   removing build/bdist.linux-armv7l/wheel
2025-12-10T01:48:56,625   Building wheel for boltzgen (pyproject.toml): finished with status 'done'
2025-12-10T01:48:56,636   Created wheel for boltzgen: filename=boltzgen-0.1.9-py3-none-any.whl size=345225 sha256=b9644c729d1a6aa8bd56bc5df376f70076255b8f1fee1f4c5a9a9a0738c9a88a
2025-12-10T01:48:56,637   Stored in directory: /tmp/pip-ephem-wheel-cache-uvzsyouj/wheels/2e/42/95/005885685ed8fe4f584889b29fb00ca1010a6c13423b562630
2025-12-10T01:48:56,652 Successfully built boltzgen
2025-12-10T01:48:56,665 Removed build tracker: '/tmp/pip-build-tracker-ptyshv08'