2025-12-10T22:01:07,823 Created temporary directory: /tmp/pip-ephem-wheel-cache-3v0grns3
2025-12-10T22:01:07,825 Created temporary directory: /tmp/pip-build-tracker-em7sj8pp
2025-12-10T22:01:07,826 Initialized build tracking at /tmp/pip-build-tracker-em7sj8pp
2025-12-10T22:01:07,826 Created build tracker: /tmp/pip-build-tracker-em7sj8pp
2025-12-10T22:01:07,826 Entered build tracker: /tmp/pip-build-tracker-em7sj8pp
2025-12-10T22:01:07,827 Created temporary directory: /tmp/pip-wheel-5vz5v8zy
2025-12-10T22:01:07,830 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2025-12-10T22:01:07,833 Created temporary directory: /tmp/pip-ephem-wheel-cache-08510xw6
2025-12-10T22:01:07,857 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2025-12-10T22:01:07,860 2 location(s) to search for versions of boltzgen:
2025-12-10T22:01:07,860 * https://pypi.org/simple/boltzgen/
2025-12-10T22:01:07,860 * https://www.piwheels.org/simple/boltzgen/
2025-12-10T22:01:07,861 Fetching project page and analyzing links: https://pypi.org/simple/boltzgen/
2025-12-10T22:01:07,862 Getting page https://pypi.org/simple/boltzgen/
2025-12-10T22:01:07,863 Found index url https://pypi.org/simple
2025-12-10T22:01:08,079 Fetched page https://pypi.org/simple/boltzgen/ as application/vnd.pypi.simple.v1+json
2025-12-10T22:01:08,084   Skipping link: No binaries permitted for boltzgen: https://files.pythonhosted.org/packages/63/90/abce182b30c62f13029523927c04820cfa69e03635c4ab7f2ca01aa64fc8/boltzgen-0.1.0-py3-none-any.whl (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.9)
2025-12-10T22:01:08,085   Found link https://files.pythonhosted.org/packages/19/6d/3259f594bdc5688261f220b0280facea3a2e497e34609c1d358c40ff26df/boltzgen-0.1.0.tar.gz (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.9), version: 0.1.0
2025-12-10T22:01:08,085   Skipping link: No binaries permitted for boltzgen: https://files.pythonhosted.org/packages/b9/e1/bea73eb825594a48e824a59ea2484c0748020a9713c5b2503d7cfe033c2b/boltzgen-0.1.1-py3-none-any.whl (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.9)
2025-12-10T22:01:08,086   Found link https://files.pythonhosted.org/packages/78/94/91e0892caf7d08ad1ee432f2d64d07f0bb4cc5fa53a010b2995db7a90dbf/boltzgen-0.1.1.tar.gz (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.9), version: 0.1.1
2025-12-10T22:01:08,087   Skipping link: No binaries permitted for boltzgen: https://files.pythonhosted.org/packages/74/06/6834e94921b9a5c978a3b6014e20db1dc528e5b67d0dcad0f8f47836908c/boltzgen-0.1.2-py3-none-any.whl (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.9)
2025-12-10T22:01:08,088   Found link https://files.pythonhosted.org/packages/20/02/6579821c7da06745452f2ecb95605dce1b8de1658d1dd4be5c6c3b970208/boltzgen-0.1.2.tar.gz (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.9), version: 0.1.2
2025-12-10T22:01:08,089   Skipping link: No binaries permitted for boltzgen: https://files.pythonhosted.org/packages/c0/a0/332273a340fe1736c69fb400c653794e3aa0f8ecc8dbe7b3b5eef1cd1511/boltzgen-0.1.3-py3-none-any.whl (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.9)
2025-12-10T22:01:08,090   Found link https://files.pythonhosted.org/packages/d1/ff/ffc1886142c710039ef8c9ec9e9646efe78e79371d51375b76787023d925/boltzgen-0.1.3.tar.gz (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.9), version: 0.1.3
2025-12-10T22:01:08,091   Skipping link: No binaries permitted for boltzgen: https://files.pythonhosted.org/packages/ab/9c/41583212ccc836d5832e0c7a6def8bb4e34c09ec29fee569e8c823ee6388/boltzgen-0.1.4-py3-none-any.whl (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.9)
2025-12-10T22:01:08,092   Found link https://files.pythonhosted.org/packages/39/5c/0c5cb924934b1ec2436e7fa2620ea8729035ca89b6272caa97e2ce443d30/boltzgen-0.1.4.tar.gz (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.9), version: 0.1.4
2025-12-10T22:01:08,092   Skipping link: No binaries permitted for boltzgen: https://files.pythonhosted.org/packages/b9/99/6dd2e0e777332886761c2cce2da02a3a1c5e216911a464f8c68b69b28ca0/boltzgen-0.1.5-py3-none-any.whl (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.11)
2025-12-10T22:01:08,094   Found link https://files.pythonhosted.org/packages/e6/f8/2b5c1f0f45ba484a1918e79c4d24cec8e7097b427af7d87696a64717d5ac/boltzgen-0.1.5.tar.gz (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.11), version: 0.1.5
2025-12-10T22:01:08,094   Skipping link: No binaries permitted for boltzgen: https://files.pythonhosted.org/packages/3e/88/4435438f149e36eb0bac1a15450e3de3d94129a1bb1b76e9c288dbcf1bc4/boltzgen-0.1.6-py3-none-any.whl (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.11)
2025-12-10T22:01:08,095   Found link https://files.pythonhosted.org/packages/f4/73/c55d02b829c4f12918ef1ff22f1752300b3a9dc8a19a9679dc6b30344cb9/boltzgen-0.1.6.tar.gz (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.11), version: 0.1.6
2025-12-10T22:01:08,096   Skipping link: No binaries permitted for boltzgen: https://files.pythonhosted.org/packages/4e/8d/203bda8dee5285f044a212d540a9faa4ec9502d2688f8617f2bf49501ba6/boltzgen-0.1.7-py3-none-any.whl (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.11)
2025-12-10T22:01:08,097   Found link https://files.pythonhosted.org/packages/90/7a/b6b99cb1b1f9a776746aeb29e9ecb49197b1f83a716b61fc71b217510600/boltzgen-0.1.7.tar.gz (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.11), version: 0.1.7
2025-12-10T22:01:08,097   Skipping link: No binaries permitted for boltzgen: https://files.pythonhosted.org/packages/92/9b/8d2dc07b96cf035ca328113487a7001de080f4626877e1f61b6e4ca4e024/boltzgen-0.1.8-py3-none-any.whl (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.11)
2025-12-10T22:01:08,098   Found link https://files.pythonhosted.org/packages/76/e5/08c09469e5cae238c0b706b527f5bb34b63eee433bb5d8df67a165deba40/boltzgen-0.1.8.tar.gz (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.11), version: 0.1.8
2025-12-10T22:01:08,099   Skipping link: No binaries permitted for boltzgen: https://files.pythonhosted.org/packages/8a/50/894b5a7fa4c2684ccab13bdf51d6ac6e1e3fc3d0d324d886c16760d76ff1/boltzgen-0.1.9-py3-none-any.whl (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.11)
2025-12-10T22:01:08,100   Found link https://files.pythonhosted.org/packages/02/7b/00d9d7e65a0ce01e49dd46b9690de7fcc6ab18a3cab882e04e2586ec8b35/boltzgen-0.1.9.tar.gz (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.11), version: 0.1.9
2025-12-10T22:01:08,101   Skipping link: No binaries permitted for boltzgen: https://files.pythonhosted.org/packages/0d/97/843cd786108ed1c91fe1be9a53c5b03e2f25f1063057560faa561bc42f47/boltzgen-0.2.0-py3-none-any.whl (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.11)
2025-12-10T22:01:08,102   Found link https://files.pythonhosted.org/packages/29/d5/f3c32d1df4c2f0b4bebe26ba16070760aa8963e239c208d52f0ca4f8af2f/boltzgen-0.2.0.tar.gz (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.11), version: 0.2.0
2025-12-10T22:01:08,103 Fetching project page and analyzing links: https://www.piwheels.org/simple/boltzgen/
2025-12-10T22:01:08,104 Getting page https://www.piwheels.org/simple/boltzgen/
2025-12-10T22:01:08,105 Found index url https://www.piwheels.org/simple
2025-12-10T22:01:08,256 Fetched page https://www.piwheels.org/simple/boltzgen/ as text/html
2025-12-10T22:01:08,260   Skipping link: No binaries permitted for boltzgen: https://www.piwheels.org/simple/boltzgen/boltzgen-0.1.9-py3-none-any.whl#sha256=b9644c729d1a6aa8bd56bc5df376f70076255b8f1fee1f4c5a9a9a0738c9a88a (from https://www.piwheels.org/simple/boltzgen/) (requires-python:>=3.11)
2025-12-10T22:01:08,261   Skipping link: No binaries permitted for boltzgen: https://www.piwheels.org/simple/boltzgen/boltzgen-0.1.8-py3-none-any.whl#sha256=06ab9d6e376a074706bf5ec577b59fd7f59d56f87b79948f5f1b5b0e0f45ccdd (from https://www.piwheels.org/simple/boltzgen/) (requires-python:>=3.11)
2025-12-10T22:01:08,261   Skipping link: No binaries permitted for boltzgen: https://www.piwheels.org/simple/boltzgen/boltzgen-0.1.7-py3-none-any.whl#sha256=9e026a4b483e47bd92a088f7fc2ba1b3bc84e74d93d99982f7a305330a0f38be (from https://www.piwheels.org/simple/boltzgen/) (requires-python:>=3.11)
2025-12-10T22:01:08,262   Skipping link: No binaries permitted for boltzgen: https://www.piwheels.org/simple/boltzgen/boltzgen-0.1.6-py3-none-any.whl#sha256=be8bb6bfb8c8a6a11498256d93a2147cd7561069dac561bb198f3c941231c70b (from https://www.piwheels.org/simple/boltzgen/) (requires-python:>=3.11)
2025-12-10T22:01:08,262   Skipping link: No binaries permitted for boltzgen: https://www.piwheels.org/simple/boltzgen/boltzgen-0.1.5-py3-none-any.whl#sha256=567e42f3cd1f8a8c24d7087b6a403d805594f6e62686348be18d8e7cfdddbec8 (from https://www.piwheels.org/simple/boltzgen/) (requires-python:>=3.11)
2025-12-10T22:01:08,263   Skipping link: No binaries permitted for boltzgen: https://www.piwheels.org/simple/boltzgen/boltzgen-0.1.4-py3-none-any.whl#sha256=3af2f20f1a3611f969104650791392db2e145fc24fb035a6ca66e716637576dc (from https://www.piwheels.org/simple/boltzgen/) (requires-python:>=3.9)
2025-12-10T22:01:08,263   Skipping link: No binaries permitted for boltzgen: https://www.piwheels.org/simple/boltzgen/boltzgen-0.1.3-py3-none-any.whl#sha256=1029da6f74a8b125d8c6c34beb6b0a7f71a3d57461631c4dc6f788b573c10247 (from https://www.piwheels.org/simple/boltzgen/) (requires-python:>=3.9)
2025-12-10T22:01:08,264   Skipping link: No binaries permitted for boltzgen: https://archive1.piwheels.org/simple/boltzgen/boltzgen-0.1.2-py3-none-any.whl#sha256=540dfba80316dc74e1622a369e825b5debdf02aa7cb197ebbb311186113017c4 (from https://www.piwheels.org/simple/boltzgen/) (requires-python:>=3.9)
2025-12-10T22:01:08,264   Skipping link: No binaries permitted for boltzgen: https://archive1.piwheels.org/simple/boltzgen/boltzgen-0.1.1-py3-none-any.whl#sha256=ba441ae54add47197ca07443c4bb7468bb6e30ae1e94224c21360afb80fd6215 (from https://www.piwheels.org/simple/boltzgen/) (requires-python:>=3.9)
2025-12-10T22:01:08,265   Skipping link: No binaries permitted for boltzgen: https://archive1.piwheels.org/simple/boltzgen/boltzgen-0.1.0-py3-none-any.whl#sha256=4c742030a0a07bb98c68ee543aad9b9d01c4a673e62ba78cab124ed43a91b644 (from https://www.piwheels.org/simple/boltzgen/) (requires-python:>=3.9)
2025-12-10T22:01:08,266 Skipping link: not a file: https://www.piwheels.org/simple/boltzgen/
2025-12-10T22:01:08,266 Skipping link: not a file: https://pypi.org/simple/boltzgen/
2025-12-10T22:01:08,286 Given no hashes to check 1 links for project 'boltzgen': discarding no candidates
2025-12-10T22:01:08,304 Collecting boltzgen==0.2.0
2025-12-10T22:01:08,307   Created temporary directory: /tmp/pip-unpack-asjibjhq
2025-12-10T22:01:08,440   Downloading boltzgen-0.2.0.tar.gz (300 kB)
2025-12-10T22:01:08,819   Added boltzgen==0.2.0 from https://files.pythonhosted.org/packages/29/d5/f3c32d1df4c2f0b4bebe26ba16070760aa8963e239c208d52f0ca4f8af2f/boltzgen-0.2.0.tar.gz to build tracker '/tmp/pip-build-tracker-em7sj8pp'
2025-12-10T22:01:08,825   Created temporary directory: /tmp/pip-build-env-aj4un__x
2025-12-10T22:01:08,830   Installing build dependencies: started
2025-12-10T22:01:08,831   Running command pip subprocess to install build dependencies
2025-12-10T22:01:09,952   Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11)
2025-12-10T22:01:10,598   DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2025-12-10T22:01:10,621   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2025-12-10T22:01:12,352   Collecting setuptools>=61
2025-12-10T22:01:12,445     Using cached https://www.piwheels.org/simple/setuptools/setuptools-80.9.0-py3-none-any.whl (1.2 MB)
2025-12-10T22:01:15,379   Installing collected packages: setuptools
2025-12-10T22:01:19,075   Successfully installed setuptools-80.9.0
2025-12-10T22:01:19,339   Installing build dependencies: finished with status 'done'
2025-12-10T22:01:19,345   Getting requirements to build wheel: started
2025-12-10T22:01:19,346   Running command Getting requirements to build wheel
2025-12-10T22:01:20,057   running egg_info
2025-12-10T22:01:20,064   writing src/boltzgen.egg-info/PKG-INFO
2025-12-10T22:01:20,071   writing dependency_links to src/boltzgen.egg-info/dependency_links.txt
2025-12-10T22:01:20,073   writing entry points to src/boltzgen.egg-info/entry_points.txt
2025-12-10T22:01:20,077   writing requirements to src/boltzgen.egg-info/requires.txt
2025-12-10T22:01:20,078   writing top-level names to src/boltzgen.egg-info/top_level.txt
2025-12-10T22:01:20,136   reading manifest file 'src/boltzgen.egg-info/SOURCES.txt'
2025-12-10T22:01:20,145   adding license file 'LICENSE'
2025-12-10T22:01:20,153   writing manifest file 'src/boltzgen.egg-info/SOURCES.txt'
2025-12-10T22:01:20,249   Getting requirements to build wheel: finished with status 'done'
2025-12-10T22:01:20,253   Created temporary directory: /tmp/pip-modern-metadata-ja1axhgx
2025-12-10T22:01:20,255   Preparing metadata (pyproject.toml): started
2025-12-10T22:01:20,256   Running command Preparing metadata (pyproject.toml)
2025-12-10T22:01:20,916   running dist_info
2025-12-10T22:01:20,928   creating /tmp/pip-modern-metadata-ja1axhgx/boltzgen.egg-info
2025-12-10T22:01:20,929   writing /tmp/pip-modern-metadata-ja1axhgx/boltzgen.egg-info/PKG-INFO
2025-12-10T22:01:20,936   writing dependency_links to /tmp/pip-modern-metadata-ja1axhgx/boltzgen.egg-info/dependency_links.txt
2025-12-10T22:01:20,938   writing entry points to /tmp/pip-modern-metadata-ja1axhgx/boltzgen.egg-info/entry_points.txt
2025-12-10T22:01:20,942   writing requirements to /tmp/pip-modern-metadata-ja1axhgx/boltzgen.egg-info/requires.txt
2025-12-10T22:01:20,943   writing top-level names to /tmp/pip-modern-metadata-ja1axhgx/boltzgen.egg-info/top_level.txt
2025-12-10T22:01:20,944   writing manifest file '/tmp/pip-modern-metadata-ja1axhgx/boltzgen.egg-info/SOURCES.txt'
2025-12-10T22:01:20,994   reading manifest file '/tmp/pip-modern-metadata-ja1axhgx/boltzgen.egg-info/SOURCES.txt'
2025-12-10T22:01:20,996   adding license file 'LICENSE'
2025-12-10T22:01:21,002   writing manifest file '/tmp/pip-modern-metadata-ja1axhgx/boltzgen.egg-info/SOURCES.txt'
2025-12-10T22:01:21,004   creating '/tmp/pip-modern-metadata-ja1axhgx/boltzgen-0.2.0.dist-info'
2025-12-10T22:01:21,128   Preparing metadata (pyproject.toml): finished with status 'done'
2025-12-10T22:01:21,132   Source in /tmp/pip-wheel-5vz5v8zy/boltzgen_ee3926a59daa4b228ddeb5d90a9671b2 has version 0.2.0, which satisfies requirement boltzgen==0.2.0 from https://files.pythonhosted.org/packages/29/d5/f3c32d1df4c2f0b4bebe26ba16070760aa8963e239c208d52f0ca4f8af2f/boltzgen-0.2.0.tar.gz
2025-12-10T22:01:21,133   Removed boltzgen==0.2.0 from https://files.pythonhosted.org/packages/29/d5/f3c32d1df4c2f0b4bebe26ba16070760aa8963e239c208d52f0ca4f8af2f/boltzgen-0.2.0.tar.gz from build tracker '/tmp/pip-build-tracker-em7sj8pp'
2025-12-10T22:01:21,139 Created temporary directory: /tmp/pip-unpack-f20a9x3b
2025-12-10T22:01:21,140 Building wheels for collected packages: boltzgen
2025-12-10T22:01:21,144   Created temporary directory: /tmp/pip-wheel-fn217a22
2025-12-10T22:01:21,144   Destination directory: /tmp/pip-wheel-fn217a22
2025-12-10T22:01:21,147   Building wheel for boltzgen (pyproject.toml): started
2025-12-10T22:01:21,148   Running command Building wheel for boltzgen (pyproject.toml)
2025-12-10T22:01:21,785   running bdist_wheel
2025-12-10T22:01:21,805   running build
2025-12-10T22:01:21,806   running build_py
2025-12-10T22:01:21,812   creating build/lib/boltzgen
2025-12-10T22:01:21,814   copying src/boltzgen/__init__.py -> build/lib/boltzgen
2025-12-10T22:01:21,817   creating build/lib/boltzgen/data
2025-12-10T22:01:21,818   copying src/boltzgen/data/rmsd_computation.py -> build/lib/boltzgen/data
2025-12-10T22:01:21,820   copying src/boltzgen/data/__init__.py -> build/lib/boltzgen/data
2025-12-10T22:01:21,822   copying src/boltzgen/data/pad.py -> build/lib/boltzgen/data
2025-12-10T22:01:21,824   copying src/boltzgen/data/const.py -> build/lib/boltzgen/data
2025-12-10T22:01:21,827   copying src/boltzgen/data/mol.py -> build/lib/boltzgen/data
2025-12-10T22:01:21,830   copying src/boltzgen/data/data.py -> build/lib/boltzgen/data
2025-12-10T22:01:21,834   creating build/lib/boltzgen/model
2025-12-10T22:01:21,835   copying src/boltzgen/model/__init__.py -> build/lib/boltzgen/model
2025-12-10T22:01:21,837   creating build/lib/boltzgen/cli
2025-12-10T22:01:21,838   copying src/boltzgen/cli/__init__.py -> build/lib/boltzgen/cli
2025-12-10T22:01:21,839   copying src/boltzgen/cli/boltzgen.py -> build/lib/boltzgen/cli
2025-12-10T22:01:21,843   creating build/lib/boltzgen/utils
2025-12-10T22:01:21,844   copying src/boltzgen/utils/__init__.py -> build/lib/boltzgen/utils
2025-12-10T22:01:21,846   copying src/boltzgen/utils/quiet.py -> build/lib/boltzgen/utils
2025-12-10T22:01:21,848   copying src/boltzgen/utils/pipeline_progress_bar.py -> build/lib/boltzgen/utils
2025-12-10T22:01:21,850   creating build/lib/boltzgen/resources
2025-12-10T22:01:21,851   copying src/boltzgen/resources/main.py -> build/lib/boltzgen/resources
2025-12-10T22:01:21,854   creating build/lib/boltzgen/task
2025-12-10T22:01:21,855   copying src/boltzgen/task/__init__.py -> build/lib/boltzgen/task
2025-12-10T22:01:21,856   copying src/boltzgen/task/task.py -> build/lib/boltzgen/task
2025-12-10T22:01:21,859   creating build/lib/boltzgen/data/write
2025-12-10T22:01:21,860   copying src/boltzgen/data/write/mmcif.py -> build/lib/boltzgen/data/write
2025-12-10T22:01:21,863   copying src/boltzgen/data/write/__init__.py -> build/lib/boltzgen/data/write
2025-12-10T22:01:21,864   copying src/boltzgen/data/write/pdb.py -> build/lib/boltzgen/data/write
2025-12-10T22:01:21,867   creating build/lib/boltzgen/data/tokenize
2025-12-10T22:01:21,868   copying src/boltzgen/data/tokenize/__init__.py -> build/lib/boltzgen/data/tokenize
2025-12-10T22:01:21,870   copying src/boltzgen/data/tokenize/tokenizer.py -> build/lib/boltzgen/data/tokenize
2025-12-10T22:01:21,873   creating build/lib/boltzgen/data/parse
2025-12-10T22:01:21,874   copying src/boltzgen/data/parse/mmcif.py -> build/lib/boltzgen/data/parse
2025-12-10T22:01:21,877   copying src/boltzgen/data/parse/pdb_parser.py -> build/lib/boltzgen/data/parse
2025-12-10T22:01:21,879   copying src/boltzgen/data/parse/__init__.py -> build/lib/boltzgen/data/parse
2025-12-10T22:01:21,881   copying src/boltzgen/data/parse/schema.py -> build/lib/boltzgen/data/parse
2025-12-10T22:01:21,885   copying src/boltzgen/data/parse/a3m.py -> build/lib/boltzgen/data/parse
2025-12-10T22:01:21,887   creating build/lib/boltzgen/data/select
2025-12-10T22:01:21,889   copying src/boltzgen/data/select/selector.py -> build/lib/boltzgen/data/select
2025-12-10T22:01:21,891   copying src/boltzgen/data/select/protein.py -> build/lib/boltzgen/data/select
2025-12-10T22:01:21,894   copying src/boltzgen/data/select/__init__.py -> build/lib/boltzgen/data/select
2025-12-10T22:01:21,896   creating build/lib/boltzgen/data/filter
2025-12-10T22:01:21,897   copying src/boltzgen/data/filter/__init__.py -> build/lib/boltzgen/data/filter
2025-12-10T22:01:21,899   creating build/lib/boltzgen/data/feature
2025-12-10T22:01:21,900   copying src/boltzgen/data/feature/featurizer.py -> build/lib/boltzgen/data/feature
2025-12-10T22:01:21,903   copying src/boltzgen/data/feature/__init__.py -> build/lib/boltzgen/data/feature
2025-12-10T22:01:21,905   creating build/lib/boltzgen/data/sample
2025-12-10T22:01:21,906   copying src/boltzgen/data/sample/__init__.py -> build/lib/boltzgen/data/sample
2025-12-10T22:01:21,908   copying src/boltzgen/data/sample/cluster.py -> build/lib/boltzgen/data/sample
2025-12-10T22:01:21,910   copying src/boltzgen/data/sample/sampler.py -> build/lib/boltzgen/data/sample
2025-12-10T22:01:21,913   creating build/lib/boltzgen/data/template
2025-12-10T22:01:21,914   copying src/boltzgen/data/template/__init__.py -> build/lib/boltzgen/data/template
2025-12-10T22:01:21,915   copying src/boltzgen/data/template/features.py -> build/lib/boltzgen/data/template
2025-12-10T22:01:21,917   creating build/lib/boltzgen/data/crop
2025-12-10T22:01:21,918   copying src/boltzgen/data/crop/cropper.py -> build/lib/boltzgen/data/crop
2025-12-10T22:01:21,920   copying src/boltzgen/data/crop/__init__.py -> build/lib/boltzgen/data/crop
2025-12-10T22:01:21,922   copying src/boltzgen/data/crop/multimer.py -> build/lib/boltzgen/data/crop
2025-12-10T22:01:21,925   creating build/lib/boltzgen/data/filter/dynamic
2025-12-10T22:01:21,926   copying src/boltzgen/data/filter/dynamic/size.py -> build/lib/boltzgen/data/filter/dynamic
2025-12-10T22:01:21,928   copying src/boltzgen/data/filter/dynamic/filter.py -> build/lib/boltzgen/data/filter/dynamic
2025-12-10T22:01:21,929   copying src/boltzgen/data/filter/dynamic/confidence.py -> build/lib/boltzgen/data/filter/dynamic
2025-12-10T22:01:21,931   copying src/boltzgen/data/filter/dynamic/resolution.py -> build/lib/boltzgen/data/filter/dynamic
2025-12-10T22:01:21,933   copying src/boltzgen/data/filter/dynamic/pdb_id_txtfile.py -> build/lib/boltzgen/data/filter/dynamic
2025-12-10T22:01:21,935   copying src/boltzgen/data/filter/dynamic/__init__.py -> build/lib/boltzgen/data/filter/dynamic
2025-12-10T22:01:21,937   copying src/boltzgen/data/filter/dynamic/max_residues.py -> build/lib/boltzgen/data/filter/dynamic
2025-12-10T22:01:21,939   copying src/boltzgen/data/filter/dynamic/date.py -> build/lib/boltzgen/data/filter/dynamic
2025-12-10T22:01:21,941   copying src/boltzgen/data/filter/dynamic/error.py -> build/lib/boltzgen/data/filter/dynamic
2025-12-10T22:01:21,943   copying src/boltzgen/data/filter/dynamic/min_protein_residues.py -> build/lib/boltzgen/data/filter/dynamic
2025-12-10T22:01:21,945   creating build/lib/boltzgen/data/filter/static
2025-12-10T22:01:21,946   copying src/boltzgen/data/filter/static/polymer.py -> build/lib/boltzgen/data/filter/static
2025-12-10T22:01:21,948   copying src/boltzgen/data/filter/static/filter.py -> build/lib/boltzgen/data/filter/static
2025-12-10T22:01:21,950   copying src/boltzgen/data/filter/static/__init__.py -> build/lib/boltzgen/data/filter/static
2025-12-10T22:01:21,952   copying src/boltzgen/data/filter/static/ligand.py -> build/lib/boltzgen/data/filter/static
2025-12-10T22:01:21,954   creating build/lib/boltzgen/model/models
2025-12-10T22:01:21,955   copying src/boltzgen/model/models/boltz.py -> build/lib/boltzgen/model/models
2025-12-10T22:01:21,959   copying src/boltzgen/model/models/__init__.py -> build/lib/boltzgen/model/models
2025-12-10T22:01:21,961   creating build/lib/boltzgen/model/optim
2025-12-10T22:01:21,962   copying src/boltzgen/model/optim/ema.py -> build/lib/boltzgen/model/optim
2025-12-10T22:01:21,964   copying src/boltzgen/model/optim/__init__.py -> build/lib/boltzgen/model/optim
2025-12-10T22:01:21,966   copying src/boltzgen/model/optim/scheduler.py -> build/lib/boltzgen/model/optim
2025-12-10T22:01:21,968   creating build/lib/boltzgen/model/validation
2025-12-10T22:01:21,969   copying src/boltzgen/model/validation/rcsb.py -> build/lib/boltzgen/model/validation
2025-12-10T22:01:21,971   copying src/boltzgen/model/validation/design.py -> build/lib/boltzgen/model/validation
2025-12-10T22:01:21,974   copying src/boltzgen/model/validation/refolding.py -> build/lib/boltzgen/model/validation
2025-12-10T22:01:21,976   copying src/boltzgen/model/validation/validator.py -> build/lib/boltzgen/model/validation
2025-12-10T22:01:21,979   creating build/lib/boltzgen/model/layers
2025-12-10T22:01:21,980   copying src/boltzgen/model/layers/dropout.py -> build/lib/boltzgen/model/layers
2025-12-10T22:01:21,983   copying src/boltzgen/model/layers/outer_product_mean.py -> build/lib/boltzgen/model/layers
2025-12-10T22:01:21,984   copying src/boltzgen/model/layers/pair_averaging.py -> build/lib/boltzgen/model/layers
2025-12-10T22:01:21,987   copying src/boltzgen/model/layers/pairformer.py -> build/lib/boltzgen/model/layers
2025-12-10T22:01:21,989   copying src/boltzgen/model/layers/transition.py -> build/lib/boltzgen/model/layers
2025-12-10T22:01:21,991   copying src/boltzgen/model/layers/miniformer.py -> build/lib/boltzgen/model/layers
2025-12-10T22:01:21,993   copying src/boltzgen/model/layers/attention.py -> build/lib/boltzgen/model/layers
2025-12-10T22:01:21,994   copying src/boltzgen/model/layers/__init__.py -> build/lib/boltzgen/model/layers
2025-12-10T22:01:21,996   copying src/boltzgen/model/layers/confidence_utils.py -> build/lib/boltzgen/model/layers
2025-12-10T22:01:21,998   copying src/boltzgen/model/layers/relative.py -> build/lib/boltzgen/model/layers
2025-12-10T22:01:22,000   copying src/boltzgen/model/layers/initialize.py -> build/lib/boltzgen/model/layers
2025-12-10T22:01:22,002   copying src/boltzgen/model/layers/triangular.py -> build/lib/boltzgen/model/layers
2025-12-10T22:01:22,005   creating build/lib/boltzgen/model/loss
2025-12-10T22:01:22,006   copying src/boltzgen/model/loss/confidence.py -> build/lib/boltzgen/model/loss
2025-12-10T22:01:22,008   copying src/boltzgen/model/loss/__init__.py -> build/lib/boltzgen/model/loss
2025-12-10T22:01:22,010   copying src/boltzgen/model/loss/diffusion.py -> build/lib/boltzgen/model/loss
2025-12-10T22:01:22,012   copying src/boltzgen/model/loss/validation.py -> build/lib/boltzgen/model/loss
2025-12-10T22:01:22,015   copying src/boltzgen/model/loss/res_type.py -> build/lib/boltzgen/model/loss
2025-12-10T22:01:22,017   copying src/boltzgen/model/loss/distogram.py -> build/lib/boltzgen/model/loss
2025-12-10T22:01:22,019   copying src/boltzgen/model/loss/bfactor.py -> build/lib/boltzgen/model/loss
2025-12-10T22:01:22,022   creating build/lib/boltzgen/model/modules
2025-12-10T22:01:22,023   copying src/boltzgen/model/modules/utils.py -> build/lib/boltzgen/model/modules
2025-12-10T22:01:22,025   copying src/boltzgen/model/modules/transformers.py -> build/lib/boltzgen/model/modules
2025-12-10T22:01:22,028   copying src/boltzgen/model/modules/trunk.py -> build/lib/boltzgen/model/modules
2025-12-10T22:01:22,030   copying src/boltzgen/model/modules/confidence.py -> build/lib/boltzgen/model/modules
2025-12-10T22:01:22,033   copying src/boltzgen/model/modules/scatter_utils.py -> build/lib/boltzgen/model/modules
2025-12-10T22:01:22,035   copying src/boltzgen/model/modules/__init__.py -> build/lib/boltzgen/model/modules
2025-12-10T22:01:22,037   copying src/boltzgen/model/modules/diffusion_conditioning.py -> build/lib/boltzgen/model/modules
2025-12-10T22:01:22,039   copying src/boltzgen/model/modules/diffusion.py -> build/lib/boltzgen/model/modules
2025-12-10T22:01:22,042   copying src/boltzgen/model/modules/inverse_fold.py -> build/lib/boltzgen/model/modules
2025-12-10T22:01:22,044   copying src/boltzgen/model/modules/encoders.py -> build/lib/boltzgen/model/modules
2025-12-10T22:01:22,047   copying src/boltzgen/model/modules/affinity.py -> build/lib/boltzgen/model/modules
2025-12-10T22:01:22,049   copying src/boltzgen/model/modules/masker.py -> build/lib/boltzgen/model/modules
2025-12-10T22:01:22,052   creating build/lib/boltzgen/model/layers/triangular_attention
2025-12-10T22:01:22,053   copying src/boltzgen/model/layers/triangular_attention/utils.py -> build/lib/boltzgen/model/layers/triangular_attention
2025-12-10T22:01:22,056   copying src/boltzgen/model/layers/triangular_attention/primitives.py -> build/lib/boltzgen/model/layers/triangular_attention
2025-12-10T22:01:22,058   copying src/boltzgen/model/layers/triangular_attention/attention.py -> build/lib/boltzgen/model/layers/triangular_attention
2025-12-10T22:01:22,061   copying src/boltzgen/model/layers/triangular_attention/__init__.py -> build/lib/boltzgen/model/layers/triangular_attention
2025-12-10T22:01:22,064   creating build/lib/boltzgen/task/analyze
2025-12-10T22:01:22,065   copying src/boltzgen/task/analyze/analyze_utils.py -> build/lib/boltzgen/task/analyze
2025-12-10T22:01:22,068   copying src/boltzgen/task/analyze/analyze.py -> build/lib/boltzgen/task/analyze
2025-12-10T22:01:22,072   creating build/lib/boltzgen/task/train
2025-12-10T22:01:22,073   copying src/boltzgen/task/train/train.py -> build/lib/boltzgen/task/train
2025-12-10T22:01:22,076   copying src/boltzgen/task/train/__init__.py -> build/lib/boltzgen/task/train
2025-12-10T22:01:22,077   copying src/boltzgen/task/train/data.py -> build/lib/boltzgen/task/train
2025-12-10T22:01:22,081   creating build/lib/boltzgen/task/predict
2025-12-10T22:01:22,082   copying src/boltzgen/task/predict/writer.py -> build/lib/boltzgen/task/predict
2025-12-10T22:01:22,085   copying src/boltzgen/task/predict/loading_utils.py -> build/lib/boltzgen/task/predict
2025-12-10T22:01:22,086   copying src/boltzgen/task/predict/data_protein_binder.py -> build/lib/boltzgen/task/predict
2025-12-10T22:01:22,089   copying src/boltzgen/task/predict/predict.py -> build/lib/boltzgen/task/predict
2025-12-10T22:01:22,091   copying src/boltzgen/task/predict/data_from_yaml.py -> build/lib/boltzgen/task/predict
2025-12-10T22:01:22,094   copying src/boltzgen/task/predict/__init__.py -> build/lib/boltzgen/task/predict
2025-12-10T22:01:22,095   copying src/boltzgen/task/predict/data_ligands.py -> build/lib/boltzgen/task/predict
2025-12-10T22:01:22,097   copying src/boltzgen/task/predict/data_from_generated.py -> build/lib/boltzgen/task/predict
2025-12-10T22:01:22,101   creating build/lib/boltzgen/task/filter
2025-12-10T22:01:22,101   copying src/boltzgen/task/filter/filter.py -> build/lib/boltzgen/task/filter
2025-12-10T22:01:22,105   copying src/boltzgen/task/filter/seqplot_utils.py -> build/lib/boltzgen/task/filter
2025-12-10T22:01:22,107   copying src/boltzgen/task/filter/__init__.py -> build/lib/boltzgen/task/filter
2025-12-10T22:01:22,109   running egg_info
2025-12-10T22:01:22,121   writing src/boltzgen.egg-info/PKG-INFO
2025-12-10T22:01:22,127   writing dependency_links to src/boltzgen.egg-info/dependency_links.txt
2025-12-10T22:01:22,129   writing entry points to src/boltzgen.egg-info/entry_points.txt
2025-12-10T22:01:22,132   writing requirements to src/boltzgen.egg-info/requires.txt
2025-12-10T22:01:22,133   writing top-level names to src/boltzgen.egg-info/top_level.txt
2025-12-10T22:01:22,171   reading manifest file 'src/boltzgen.egg-info/SOURCES.txt'
2025-12-10T22:01:22,179   adding license file 'LICENSE'
2025-12-10T22:01:22,187   writing manifest file 'src/boltzgen.egg-info/SOURCES.txt'
2025-12-10T22:01:22,206   creating build/lib/boltzgen/resources/config
2025-12-10T22:01:22,207   copying src/boltzgen/resources/config/fold.yaml -> build/lib/boltzgen/resources/config
2025-12-10T22:01:22,210   copying src/boltzgen/resources/config/filtering.yaml -> build/lib/boltzgen/resources/config
2025-12-10T22:01:22,212   copying src/boltzgen/resources/config/analysis.yaml -> build/lib/boltzgen/resources/config
2025-12-10T22:01:22,215   copying src/boltzgen/resources/config/design.yaml -> build/lib/boltzgen/resources/config
2025-12-10T22:01:22,217   copying src/boltzgen/resources/config/affinity.yaml -> build/lib/boltzgen/resources/config
2025-12-10T22:01:22,219   copying src/boltzgen/resources/config/inverse_fold.yaml -> build/lib/boltzgen/resources/config
2025-12-10T22:01:22,222   copying src/boltzgen/resources/config/inverse_fold_only.yaml -> build/lib/boltzgen/resources/config
2025-12-10T22:01:22,224   creating build/lib/boltzgen/resources/config/train
2025-12-10T22:01:22,225   copying src/boltzgen/resources/config/train/inverse_folding.yaml -> build/lib/boltzgen/resources/config/train
2025-12-10T22:01:22,228   copying src/boltzgen/resources/config/train/boltzgen.yaml -> build/lib/boltzgen/resources/config/train
2025-12-10T22:01:22,231   copying src/boltzgen/resources/config/train/boltzgen_small.yaml -> build/lib/boltzgen/resources/config/train
2025-12-10T22:01:22,262   installing to build/bdist.linux-armv7l/wheel
2025-12-10T22:01:22,262   running install
2025-12-10T22:01:22,286   running install_lib
2025-12-10T22:01:22,292   creating build/bdist.linux-armv7l/wheel
2025-12-10T22:01:22,294   creating build/bdist.linux-armv7l/wheel/boltzgen
2025-12-10T22:01:22,296   creating build/bdist.linux-armv7l/wheel/boltzgen/data
2025-12-10T22:01:22,298   creating build/bdist.linux-armv7l/wheel/boltzgen/data/write
2025-12-10T22:01:22,299   copying build/lib/boltzgen/data/write/mmcif.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/write
2025-12-10T22:01:22,302   copying build/lib/boltzgen/data/write/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/write
2025-12-10T22:01:22,303   copying build/lib/boltzgen/data/write/pdb.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/write
2025-12-10T22:01:22,306   creating build/bdist.linux-armv7l/wheel/boltzgen/data/tokenize
2025-12-10T22:01:22,307   copying build/lib/boltzgen/data/tokenize/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/tokenize
2025-12-10T22:01:22,308   copying build/lib/boltzgen/data/tokenize/tokenizer.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/tokenize
2025-12-10T22:01:22,311   copying build/lib/boltzgen/data/rmsd_computation.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data
2025-12-10T22:01:22,314   creating build/bdist.linux-armv7l/wheel/boltzgen/data/parse
2025-12-10T22:01:22,315   copying build/lib/boltzgen/data/parse/mmcif.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/parse
2025-12-10T22:01:22,318   copying build/lib/boltzgen/data/parse/pdb_parser.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/parse
2025-12-10T22:01:22,320   copying build/lib/boltzgen/data/parse/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/parse
2025-12-10T22:01:22,322   copying build/lib/boltzgen/data/parse/schema.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/parse
2025-12-10T22:01:22,326   copying build/lib/boltzgen/data/parse/a3m.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/parse
2025-12-10T22:01:22,328   creating build/bdist.linux-armv7l/wheel/boltzgen/data/select
2025-12-10T22:01:22,330   copying build/lib/boltzgen/data/select/selector.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/select
2025-12-10T22:01:22,332   copying build/lib/boltzgen/data/select/protein.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/select
2025-12-10T22:01:22,335   copying build/lib/boltzgen/data/select/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/select
2025-12-10T22:01:22,337   creating build/bdist.linux-armv7l/wheel/boltzgen/data/filter
2025-12-10T22:01:22,339   creating build/bdist.linux-armv7l/wheel/boltzgen/data/filter/dynamic
2025-12-10T22:01:22,340   copying build/lib/boltzgen/data/filter/dynamic/size.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter/dynamic
2025-12-10T22:01:22,342   copying build/lib/boltzgen/data/filter/dynamic/filter.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter/dynamic
2025-12-10T22:01:22,344   copying build/lib/boltzgen/data/filter/dynamic/confidence.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter/dynamic
2025-12-10T22:01:22,346   copying build/lib/boltzgen/data/filter/dynamic/resolution.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter/dynamic
2025-12-10T22:01:22,348   copying build/lib/boltzgen/data/filter/dynamic/pdb_id_txtfile.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter/dynamic
2025-12-10T22:01:22,350   copying build/lib/boltzgen/data/filter/dynamic/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter/dynamic
2025-12-10T22:01:22,352   copying build/lib/boltzgen/data/filter/dynamic/max_residues.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter/dynamic
2025-12-10T22:01:22,354   copying build/lib/boltzgen/data/filter/dynamic/date.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter/dynamic
2025-12-10T22:01:22,356   copying build/lib/boltzgen/data/filter/dynamic/error.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter/dynamic
2025-12-10T22:01:22,358   copying build/lib/boltzgen/data/filter/dynamic/min_protein_residues.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter/dynamic
2025-12-10T22:01:22,360   creating build/bdist.linux-armv7l/wheel/boltzgen/data/filter/static
2025-12-10T22:01:22,362   copying build/lib/boltzgen/data/filter/static/polymer.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter/static
2025-12-10T22:01:22,364   copying build/lib/boltzgen/data/filter/static/filter.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter/static
2025-12-10T22:01:22,366   copying build/lib/boltzgen/data/filter/static/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter/static
2025-12-10T22:01:22,367   copying build/lib/boltzgen/data/filter/static/ligand.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter/static
2025-12-10T22:01:22,369   copying build/lib/boltzgen/data/filter/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter
2025-12-10T22:01:22,372   creating build/bdist.linux-armv7l/wheel/boltzgen/data/feature
2025-12-10T22:01:22,373   copying build/lib/boltzgen/data/feature/featurizer.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/feature
2025-12-10T22:01:22,377   copying build/lib/boltzgen/data/feature/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/feature
2025-12-10T22:01:22,379   copying build/lib/boltzgen/data/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data
2025-12-10T22:01:22,380   copying build/lib/boltzgen/data/pad.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data
2025-12-10T22:01:22,382   copying build/lib/boltzgen/data/const.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data
2025-12-10T22:01:22,386   creating build/bdist.linux-armv7l/wheel/boltzgen/data/sample
2025-12-10T22:01:22,387   copying build/lib/boltzgen/data/sample/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/sample
2025-12-10T22:01:22,389   copying build/lib/boltzgen/data/sample/cluster.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/sample
2025-12-10T22:01:22,392   copying build/lib/boltzgen/data/sample/sampler.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/sample
2025-12-10T22:01:22,394   copying build/lib/boltzgen/data/mol.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data
2025-12-10T22:01:22,397   creating build/bdist.linux-armv7l/wheel/boltzgen/data/template
2025-12-10T22:01:22,398   copying build/lib/boltzgen/data/template/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/template
2025-12-10T22:01:22,400   copying build/lib/boltzgen/data/template/features.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/template
2025-12-10T22:01:22,402   copying build/lib/boltzgen/data/data.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data
2025-12-10T22:01:22,406   creating build/bdist.linux-armv7l/wheel/boltzgen/data/crop
2025-12-10T22:01:22,407   copying build/lib/boltzgen/data/crop/cropper.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/crop
2025-12-10T22:01:22,409   copying build/lib/boltzgen/data/crop/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/crop
2025-12-10T22:01:22,411   copying build/lib/boltzgen/data/crop/multimer.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/crop
2025-12-10T22:01:22,414   creating build/bdist.linux-armv7l/wheel/boltzgen/model
2025-12-10T22:01:22,416   creating build/bdist.linux-armv7l/wheel/boltzgen/model/models
2025-12-10T22:01:22,417   copying build/lib/boltzgen/model/models/boltz.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/models
2025-12-10T22:01:22,420   copying build/lib/boltzgen/model/models/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/models
2025-12-10T22:01:22,423   creating build/bdist.linux-armv7l/wheel/boltzgen/model/optim
2025-12-10T22:01:22,424   copying build/lib/boltzgen/model/optim/ema.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/optim
2025-12-10T22:01:22,426   copying build/lib/boltzgen/model/optim/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/optim
2025-12-10T22:01:22,428   copying build/lib/boltzgen/model/optim/scheduler.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/optim
2025-12-10T22:01:22,431   creating build/bdist.linux-armv7l/wheel/boltzgen/model/validation
2025-12-10T22:01:22,432   copying build/lib/boltzgen/model/validation/rcsb.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/validation
2025-12-10T22:01:22,434   copying build/lib/boltzgen/model/validation/design.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/validation
2025-12-10T22:01:22,436   copying build/lib/boltzgen/model/validation/refolding.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/validation
2025-12-10T22:01:22,439   copying build/lib/boltzgen/model/validation/validator.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/validation
2025-12-10T22:01:22,442   creating build/bdist.linux-armv7l/wheel/boltzgen/model/layers
2025-12-10T22:01:22,444   copying build/lib/boltzgen/model/layers/dropout.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers
2025-12-10T22:01:22,446   copying build/lib/boltzgen/model/layers/outer_product_mean.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers
2025-12-10T22:01:22,447   copying build/lib/boltzgen/model/layers/pair_averaging.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers
2025-12-10T22:01:22,450   copying build/lib/boltzgen/model/layers/pairformer.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers
2025-12-10T22:01:22,452   copying build/lib/boltzgen/model/layers/transition.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers
2025-12-10T22:01:22,454   copying build/lib/boltzgen/model/layers/miniformer.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers
2025-12-10T22:01:22,457   copying build/lib/boltzgen/model/layers/attention.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers
2025-12-10T22:01:22,459   copying build/lib/boltzgen/model/layers/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers
2025-12-10T22:01:22,460   copying build/lib/boltzgen/model/layers/confidence_utils.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers
2025-12-10T22:01:22,463   copying build/lib/boltzgen/model/layers/relative.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers
2025-12-10T22:01:22,465   copying build/lib/boltzgen/model/layers/initialize.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers
2025-12-10T22:01:22,467   copying build/lib/boltzgen/model/layers/triangular.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers
2025-12-10T22:01:22,470   creating build/bdist.linux-armv7l/wheel/boltzgen/model/layers/triangular_attention
2025-12-10T22:01:22,471   copying build/lib/boltzgen/model/layers/triangular_attention/utils.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers/triangular_attention
2025-12-10T22:01:22,475   copying build/lib/boltzgen/model/layers/triangular_attention/primitives.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers/triangular_attention
2025-12-10T22:01:22,477   copying build/lib/boltzgen/model/layers/triangular_attention/attention.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers/triangular_attention
2025-12-10T22:01:22,480   copying build/lib/boltzgen/model/layers/triangular_attention/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers/triangular_attention
2025-12-10T22:01:22,483   creating build/bdist.linux-armv7l/wheel/boltzgen/model/loss
2025-12-10T22:01:22,484   copying build/lib/boltzgen/model/loss/confidence.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/loss
2025-12-10T22:01:22,487   copying build/lib/boltzgen/model/loss/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/loss
2025-12-10T22:01:22,488   copying build/lib/boltzgen/model/loss/diffusion.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/loss
2025-12-10T22:01:22,491   copying build/lib/boltzgen/model/loss/validation.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/loss
2025-12-10T22:01:22,494   copying build/lib/boltzgen/model/loss/res_type.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/loss
2025-12-10T22:01:22,496   copying build/lib/boltzgen/model/loss/distogram.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/loss
2025-12-10T22:01:22,499   copying build/lib/boltzgen/model/loss/bfactor.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/loss
2025-12-10T22:01:22,500   copying build/lib/boltzgen/model/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model
2025-12-10T22:01:22,503   creating build/bdist.linux-armv7l/wheel/boltzgen/model/modules
2025-12-10T22:01:22,504   copying build/lib/boltzgen/model/modules/utils.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/modules
2025-12-10T22:01:22,506   copying build/lib/boltzgen/model/modules/transformers.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/modules
2025-12-10T22:01:22,508   copying build/lib/boltzgen/model/modules/trunk.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/modules
2025-12-10T22:01:22,511   copying build/lib/boltzgen/model/modules/confidence.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/modules
2025-12-10T22:01:22,514   copying build/lib/boltzgen/model/modules/scatter_utils.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/modules
2025-12-10T22:01:22,516   copying build/lib/boltzgen/model/modules/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/modules
2025-12-10T22:01:22,518   copying build/lib/boltzgen/model/modules/diffusion_conditioning.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/modules
2025-12-10T22:01:22,520   copying build/lib/boltzgen/model/modules/diffusion.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/modules
2025-12-10T22:01:22,522   copying build/lib/boltzgen/model/modules/inverse_fold.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/modules
2025-12-10T22:01:22,525   copying build/lib/boltzgen/model/modules/encoders.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/modules
2025-12-10T22:01:22,528   copying build/lib/boltzgen/model/modules/affinity.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/modules
2025-12-10T22:01:22,530   copying build/lib/boltzgen/model/modules/masker.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/modules
2025-12-10T22:01:22,533   creating build/bdist.linux-armv7l/wheel/boltzgen/cli
2025-12-10T22:01:22,534   copying build/lib/boltzgen/cli/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/cli
2025-12-10T22:01:22,536   copying build/lib/boltzgen/cli/boltzgen.py -> build/bdist.linux-armv7l/wheel/./boltzgen/cli
2025-12-10T22:01:22,540   copying build/lib/boltzgen/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen
2025-12-10T22:01:22,542   creating build/bdist.linux-armv7l/wheel/boltzgen/utils
2025-12-10T22:01:22,543   copying build/lib/boltzgen/utils/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/utils
2025-12-10T22:01:22,545   copying build/lib/boltzgen/utils/quiet.py -> build/bdist.linux-armv7l/wheel/./boltzgen/utils
2025-12-10T22:01:22,547   copying build/lib/boltzgen/utils/pipeline_progress_bar.py -> build/bdist.linux-armv7l/wheel/./boltzgen/utils
2025-12-10T22:01:22,549   creating build/bdist.linux-armv7l/wheel/boltzgen/resources
2025-12-10T22:01:22,551   creating build/bdist.linux-armv7l/wheel/boltzgen/resources/config
2025-12-10T22:01:22,552   copying build/lib/boltzgen/resources/config/fold.yaml -> build/bdist.linux-armv7l/wheel/./boltzgen/resources/config
2025-12-10T22:01:22,554   copying build/lib/boltzgen/resources/config/filtering.yaml -> build/bdist.linux-armv7l/wheel/./boltzgen/resources/config
2025-12-10T22:01:22,556   copying build/lib/boltzgen/resources/config/analysis.yaml -> build/bdist.linux-armv7l/wheel/./boltzgen/resources/config
2025-12-10T22:01:22,559   creating build/bdist.linux-armv7l/wheel/boltzgen/resources/config/train
2025-12-10T22:01:22,560   copying build/lib/boltzgen/resources/config/train/inverse_folding.yaml -> build/bdist.linux-armv7l/wheel/./boltzgen/resources/config/train
2025-12-10T22:01:22,563   copying build/lib/boltzgen/resources/config/train/boltzgen.yaml -> build/bdist.linux-armv7l/wheel/./boltzgen/resources/config/train
2025-12-10T22:01:22,566   copying build/lib/boltzgen/resources/config/train/boltzgen_small.yaml -> build/bdist.linux-armv7l/wheel/./boltzgen/resources/config/train
2025-12-10T22:01:22,569   copying build/lib/boltzgen/resources/config/design.yaml -> build/bdist.linux-armv7l/wheel/./boltzgen/resources/config
2025-12-10T22:01:22,571   copying build/lib/boltzgen/resources/config/affinity.yaml -> build/bdist.linux-armv7l/wheel/./boltzgen/resources/config
2025-12-10T22:01:22,573   copying build/lib/boltzgen/resources/config/inverse_fold.yaml -> build/bdist.linux-armv7l/wheel/./boltzgen/resources/config
2025-12-10T22:01:22,575   copying build/lib/boltzgen/resources/config/inverse_fold_only.yaml -> build/bdist.linux-armv7l/wheel/./boltzgen/resources/config
2025-12-10T22:01:22,577   copying build/lib/boltzgen/resources/main.py -> build/bdist.linux-armv7l/wheel/./boltzgen/resources
2025-12-10T22:01:22,579   creating build/bdist.linux-armv7l/wheel/boltzgen/task
2025-12-10T22:01:22,581   creating build/bdist.linux-armv7l/wheel/boltzgen/task/analyze
2025-12-10T22:01:22,582   copying build/lib/boltzgen/task/analyze/analyze_utils.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/analyze
2025-12-10T22:01:22,585   copying build/lib/boltzgen/task/analyze/analyze.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/analyze
2025-12-10T22:01:22,589   creating build/bdist.linux-armv7l/wheel/boltzgen/task/train
2025-12-10T22:01:22,590   copying build/lib/boltzgen/task/train/train.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/train
2025-12-10T22:01:22,593   copying build/lib/boltzgen/task/train/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/train
2025-12-10T22:01:22,594   copying build/lib/boltzgen/task/train/data.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/train
2025-12-10T22:01:22,598   creating build/bdist.linux-armv7l/wheel/boltzgen/task/predict
2025-12-10T22:01:22,599   copying build/lib/boltzgen/task/predict/writer.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/predict
2025-12-10T22:01:22,602   copying build/lib/boltzgen/task/predict/loading_utils.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/predict
2025-12-10T22:01:22,603   copying build/lib/boltzgen/task/predict/data_protein_binder.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/predict
2025-12-10T22:01:22,606   copying build/lib/boltzgen/task/predict/predict.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/predict
2025-12-10T22:01:22,608   copying build/lib/boltzgen/task/predict/data_from_yaml.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/predict
2025-12-10T22:01:22,610   copying build/lib/boltzgen/task/predict/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/predict
2025-12-10T22:01:22,612   copying build/lib/boltzgen/task/predict/data_ligands.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/predict
2025-12-10T22:01:22,615   copying build/lib/boltzgen/task/predict/data_from_generated.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/predict
2025-12-10T22:01:22,618   creating build/bdist.linux-armv7l/wheel/boltzgen/task/filter
2025-12-10T22:01:22,619   copying build/lib/boltzgen/task/filter/filter.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/filter
2025-12-10T22:01:22,623   copying build/lib/boltzgen/task/filter/seqplot_utils.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/filter
2025-12-10T22:01:22,625   copying build/lib/boltzgen/task/filter/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/filter
2025-12-10T22:01:22,627   copying build/lib/boltzgen/task/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task
2025-12-10T22:01:22,628   copying build/lib/boltzgen/task/task.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task
2025-12-10T22:01:22,630   running install_egg_info
2025-12-10T22:01:22,636   Copying src/boltzgen.egg-info to build/bdist.linux-armv7l/wheel/./boltzgen-0.2.0-py3.11.egg-info
2025-12-10T22:01:22,647   running install_scripts
2025-12-10T22:01:22,659   creating build/bdist.linux-armv7l/wheel/boltzgen-0.2.0.dist-info/WHEEL
2025-12-10T22:01:22,662   creating '/tmp/pip-wheel-fn217a22/.tmp-gy0bw7zk/boltzgen-0.2.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2025-12-10T22:01:22,664   adding 'boltzgen/__init__.py'
2025-12-10T22:01:22,666   adding 'boltzgen/cli/__init__.py'
2025-12-10T22:01:22,674   adding 'boltzgen/cli/boltzgen.py'
2025-12-10T22:01:22,676   adding 'boltzgen/data/__init__.py'
2025-12-10T22:01:22,684   adding 'boltzgen/data/const.py'
2025-12-10T22:01:22,692   adding 'boltzgen/data/data.py'
2025-12-10T22:01:22,697   adding 'boltzgen/data/mol.py'
2025-12-10T22:01:22,699   adding 'boltzgen/data/pad.py'
2025-12-10T22:01:22,700   adding 'boltzgen/data/rmsd_computation.py'
2025-12-10T22:01:22,702   adding 'boltzgen/data/crop/__init__.py'
2025-12-10T22:01:22,703   adding 'boltzgen/data/crop/cropper.py'
2025-12-10T22:01:22,705   adding 'boltzgen/data/crop/multimer.py'
2025-12-10T22:01:22,707   adding 'boltzgen/data/feature/__init__.py'
2025-12-10T22:01:22,716   adding 'boltzgen/data/feature/featurizer.py'
2025-12-10T22:01:22,718   adding 'boltzgen/data/filter/__init__.py'
2025-12-10T22:01:22,720   adding 'boltzgen/data/filter/dynamic/__init__.py'
2025-12-10T22:01:22,721   adding 'boltzgen/data/filter/dynamic/confidence.py'
2025-12-10T22:01:22,722   adding 'boltzgen/data/filter/dynamic/date.py'
2025-12-10T22:01:22,723   adding 'boltzgen/data/filter/dynamic/error.py'
2025-12-10T22:01:22,724   adding 'boltzgen/data/filter/dynamic/filter.py'
2025-12-10T22:01:22,726   adding 'boltzgen/data/filter/dynamic/max_residues.py'
2025-12-10T22:01:22,727   adding 'boltzgen/data/filter/dynamic/min_protein_residues.py'
2025-12-10T22:01:22,728   adding 'boltzgen/data/filter/dynamic/pdb_id_txtfile.py'
2025-12-10T22:01:22,729   adding 'boltzgen/data/filter/dynamic/resolution.py'
2025-12-10T22:01:22,730   adding 'boltzgen/data/filter/dynamic/size.py'
2025-12-10T22:01:22,732   adding 'boltzgen/data/filter/static/__init__.py'
2025-12-10T22:01:22,733   adding 'boltzgen/data/filter/static/filter.py'
2025-12-10T22:01:22,734   adding 'boltzgen/data/filter/static/ligand.py'
2025-12-10T22:01:22,736   adding 'boltzgen/data/filter/static/polymer.py'
2025-12-10T22:01:22,738   adding 'boltzgen/data/parse/__init__.py'
2025-12-10T22:01:22,739   adding 'boltzgen/data/parse/a3m.py'
2025-12-10T22:01:22,744   adding 'boltzgen/data/parse/mmcif.py'
2025-12-10T22:01:22,746   adding 'boltzgen/data/parse/pdb_parser.py'
2025-12-10T22:01:22,754   adding 'boltzgen/data/parse/schema.py'
2025-12-10T22:01:22,756   adding 'boltzgen/data/sample/__init__.py'
2025-12-10T22:01:22,758   adding 'boltzgen/data/sample/cluster.py'
2025-12-10T22:01:22,759   adding 'boltzgen/data/sample/sampler.py'
2025-12-10T22:01:22,761   adding 'boltzgen/data/select/__init__.py'
2025-12-10T22:01:22,764   adding 'boltzgen/data/select/protein.py'
2025-12-10T22:01:22,765   adding 'boltzgen/data/select/selector.py'
2025-12-10T22:01:22,767   adding 'boltzgen/data/template/__init__.py'
2025-12-10T22:01:22,768   adding 'boltzgen/data/template/features.py'
2025-12-10T22:01:22,770   adding 'boltzgen/data/tokenize/__init__.py'
2025-12-10T22:01:22,772   adding 'boltzgen/data/tokenize/tokenizer.py'
2025-12-10T22:01:22,774   adding 'boltzgen/data/write/__init__.py'
2025-12-10T22:01:22,776   adding 'boltzgen/data/write/mmcif.py'
2025-12-10T22:01:22,777   adding 'boltzgen/data/write/pdb.py'
2025-12-10T22:01:22,779   adding 'boltzgen/model/__init__.py'
2025-12-10T22:01:22,781   adding 'boltzgen/model/layers/__init__.py'
2025-12-10T22:01:22,782   adding 'boltzgen/model/layers/attention.py'
2025-12-10T22:01:22,784   adding 'boltzgen/model/layers/confidence_utils.py'
2025-12-10T22:01:22,785   adding 'boltzgen/model/layers/dropout.py'
2025-12-10T22:01:22,787   adding 'boltzgen/model/layers/initialize.py'
2025-12-10T22:01:22,788   adding 'boltzgen/model/layers/miniformer.py'
2025-12-10T22:01:22,789   adding 'boltzgen/model/layers/outer_product_mean.py'
2025-12-10T22:01:22,791   adding 'boltzgen/model/layers/pair_averaging.py'
2025-12-10T22:01:22,792   adding 'boltzgen/model/layers/pairformer.py'
2025-12-10T22:01:22,794   adding 'boltzgen/model/layers/relative.py'
2025-12-10T22:01:22,795   adding 'boltzgen/model/layers/transition.py'
2025-12-10T22:01:22,796   adding 'boltzgen/model/layers/triangular.py'
2025-12-10T22:01:22,798   adding 'boltzgen/model/layers/triangular_attention/__init__.py'
2025-12-10T22:01:22,800   adding 'boltzgen/model/layers/triangular_attention/attention.py'
2025-12-10T22:01:22,802   adding 'boltzgen/model/layers/triangular_attention/primitives.py'
2025-12-10T22:01:22,804   adding 'boltzgen/model/layers/triangular_attention/utils.py'
2025-12-10T22:01:22,806   adding 'boltzgen/model/loss/__init__.py'
2025-12-10T22:01:22,807   adding 'boltzgen/model/loss/bfactor.py'
2025-12-10T22:01:22,810   adding 'boltzgen/model/loss/confidence.py'
2025-12-10T22:01:22,812   adding 'boltzgen/model/loss/diffusion.py'
2025-12-10T22:01:22,813   adding 'boltzgen/model/loss/distogram.py'
2025-12-10T22:01:22,815   adding 'boltzgen/model/loss/res_type.py'
2025-12-10T22:01:22,820   adding 'boltzgen/model/loss/validation.py'
2025-12-10T22:01:22,822   adding 'boltzgen/model/models/__init__.py'
2025-12-10T22:01:22,828   adding 'boltzgen/model/models/boltz.py'
2025-12-10T22:01:22,830   adding 'boltzgen/model/modules/__init__.py'
2025-12-10T22:01:22,831   adding 'boltzgen/model/modules/affinity.py'
2025-12-10T22:01:22,834   adding 'boltzgen/model/modules/confidence.py'
2025-12-10T22:01:22,838   adding 'boltzgen/model/modules/diffusion.py'
2025-12-10T22:01:22,839   adding 'boltzgen/model/modules/diffusion_conditioning.py'
2025-12-10T22:01:22,842   adding 'boltzgen/model/modules/encoders.py'
2025-12-10T22:01:22,845   adding 'boltzgen/model/modules/inverse_fold.py'
2025-12-10T22:01:22,847   adding 'boltzgen/model/modules/masker.py'
2025-12-10T22:01:22,849   adding 'boltzgen/model/modules/scatter_utils.py'
2025-12-10T22:01:22,850   adding 'boltzgen/model/modules/transformers.py'
2025-12-10T22:01:22,853   adding 'boltzgen/model/modules/trunk.py'
2025-12-10T22:01:22,855   adding 'boltzgen/model/modules/utils.py'
2025-12-10T22:01:22,857   adding 'boltzgen/model/optim/__init__.py'
2025-12-10T22:01:22,859   adding 'boltzgen/model/optim/ema.py'
2025-12-10T22:01:22,860   adding 'boltzgen/model/optim/scheduler.py'
2025-12-10T22:01:22,863   adding 'boltzgen/model/validation/design.py'
2025-12-10T22:01:22,865   adding 'boltzgen/model/validation/rcsb.py'
2025-12-10T22:01:22,867   adding 'boltzgen/model/validation/refolding.py'
2025-12-10T22:01:22,870   adding 'boltzgen/model/validation/validator.py'
2025-12-10T22:01:22,872   adding 'boltzgen/resources/main.py'
2025-12-10T22:01:22,873   adding 'boltzgen/resources/config/affinity.yaml'
2025-12-10T22:01:22,875   adding 'boltzgen/resources/config/analysis.yaml'
2025-12-10T22:01:22,876   adding 'boltzgen/resources/config/design.yaml'
2025-12-10T22:01:22,877   adding 'boltzgen/resources/config/filtering.yaml'
2025-12-10T22:01:22,879   adding 'boltzgen/resources/config/fold.yaml'
2025-12-10T22:01:22,880   adding 'boltzgen/resources/config/inverse_fold.yaml'
2025-12-10T22:01:22,881   adding 'boltzgen/resources/config/inverse_fold_only.yaml'
2025-12-10T22:01:22,884   adding 'boltzgen/resources/config/train/boltzgen.yaml'
2025-12-10T22:01:22,886   adding 'boltzgen/resources/config/train/boltzgen_small.yaml'
2025-12-10T22:01:22,888   adding 'boltzgen/resources/config/train/inverse_folding.yaml'
2025-12-10T22:01:22,890   adding 'boltzgen/task/__init__.py'
2025-12-10T22:01:22,891   adding 'boltzgen/task/task.py'
2025-12-10T22:01:22,898   adding 'boltzgen/task/analyze/analyze.py'
2025-12-10T22:01:22,903   adding 'boltzgen/task/analyze/analyze_utils.py'
2025-12-10T22:01:22,905   adding 'boltzgen/task/filter/__init__.py'
2025-12-10T22:01:22,910   adding 'boltzgen/task/filter/filter.py'
2025-12-10T22:01:22,913   adding 'boltzgen/task/filter/seqplot_utils.py'
2025-12-10T22:01:22,915   adding 'boltzgen/task/predict/__init__.py'
2025-12-10T22:01:22,918   adding 'boltzgen/task/predict/data_from_generated.py'
2025-12-10T22:01:22,920   adding 'boltzgen/task/predict/data_from_yaml.py'
2025-12-10T22:01:22,923   adding 'boltzgen/task/predict/data_ligands.py'
2025-12-10T22:01:22,925   adding 'boltzgen/task/predict/data_protein_binder.py'
2025-12-10T22:01:22,927   adding 'boltzgen/task/predict/loading_utils.py'
2025-12-10T22:01:22,928   adding 'boltzgen/task/predict/predict.py'
2025-12-10T22:01:22,931   adding 'boltzgen/task/predict/writer.py'
2025-12-10T22:01:22,932   adding 'boltzgen/task/train/__init__.py'
2025-12-10T22:01:22,936   adding 'boltzgen/task/train/data.py'
2025-12-10T22:01:22,938   adding 'boltzgen/task/train/train.py'
2025-12-10T22:01:22,940   adding 'boltzgen/utils/__init__.py'
2025-12-10T22:01:22,941   adding 'boltzgen/utils/pipeline_progress_bar.py'
2025-12-10T22:01:22,942   adding 'boltzgen/utils/quiet.py'
2025-12-10T22:01:22,945   adding 'boltzgen-0.2.0.dist-info/licenses/LICENSE'
2025-12-10T22:01:22,946   adding 'boltzgen-0.2.0.dist-info/METADATA'
2025-12-10T22:01:22,947   adding 'boltzgen-0.2.0.dist-info/WHEEL'
2025-12-10T22:01:22,948   adding 'boltzgen-0.2.0.dist-info/entry_points.txt'
2025-12-10T22:01:22,949   adding 'boltzgen-0.2.0.dist-info/top_level.txt'
2025-12-10T22:01:22,951   adding 'boltzgen-0.2.0.dist-info/RECORD'
2025-12-10T22:01:22,957   removing build/bdist.linux-armv7l/wheel
2025-12-10T22:01:23,098   Building wheel for boltzgen (pyproject.toml): finished with status 'done'
2025-12-10T22:01:23,114   Created wheel for boltzgen: filename=boltzgen-0.2.0-py3-none-any.whl size=345219 sha256=46da7ced73e2aa222adc843f888a4cd245df9aaa959b7a43dbe2f7b0997422e5
2025-12-10T22:01:23,115   Stored in directory: /tmp/pip-ephem-wheel-cache-08510xw6/wheels/7c/0a/34/1557a1cba2db6d4aaeec56ab94da83e6f12caea18b8bb02738
2025-12-10T22:01:23,129 Successfully built boltzgen
2025-12-10T22:01:23,150 Removed build tracker: '/tmp/pip-build-tracker-em7sj8pp'