2025-12-13T03:58:45,987 Created temporary directory: /tmp/pip-ephem-wheel-cache-cgr7occb 2025-12-13T03:58:45,989 Created temporary directory: /tmp/pip-build-tracker-6q8ycggs 2025-12-13T03:58:45,990 Initialized build tracking at /tmp/pip-build-tracker-6q8ycggs 2025-12-13T03:58:45,990 Created build tracker: /tmp/pip-build-tracker-6q8ycggs 2025-12-13T03:58:45,991 Entered build tracker: /tmp/pip-build-tracker-6q8ycggs 2025-12-13T03:58:45,992 Created temporary directory: /tmp/pip-wheel-w70zn66y 2025-12-13T03:58:45,994 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2025-12-13T03:58:45,997 Created temporary directory: /tmp/pip-ephem-wheel-cache-baaksm_y 2025-12-13T03:58:46,022 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-12-13T03:58:46,025 2 location(s) to search for versions of galaxy-config: 2025-12-13T03:58:46,025 * https://pypi.org/simple/galaxy-config/ 2025-12-13T03:58:46,025 * https://www.piwheels.org/simple/galaxy-config/ 2025-12-13T03:58:46,026 Fetching project page and analyzing links: https://pypi.org/simple/galaxy-config/ 2025-12-13T03:58:46,027 Getting page https://pypi.org/simple/galaxy-config/ 2025-12-13T03:58:46,028 Found index url https://pypi.org/simple 2025-12-13T03:58:46,242 Fetched page https://pypi.org/simple/galaxy-config/ as application/vnd.pypi.simple.v1+json 2025-12-13T03:58:46,254 Found link 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https://files.pythonhosted.org/packages/8a/89/f9003025040c70bdd5d1a97b8c4a64b9a75f1f949f66dce2279f5a5e9ff6/galaxy_config-25.1.dev0-py3-none-any.whl (from https://pypi.org/simple/galaxy-config/) (requires-python:>=3.9) 2025-12-13T03:58:46,305 Found link https://files.pythonhosted.org/packages/67/c5/23e4a0f873db8f48cba2053f5af86b5df95cb6541f18c9367547232015eb/galaxy_config-25.1.dev0.tar.gz (from https://pypi.org/simple/galaxy-config/) (requires-python:>=3.9), version: 25.1.dev0 2025-12-13T03:58:46,306 Fetching project page and analyzing links: https://www.piwheels.org/simple/galaxy-config/ 2025-12-13T03:58:46,306 Getting page https://www.piwheels.org/simple/galaxy-config/ 2025-12-13T03:58:46,308 Found index url https://www.piwheels.org/simple 2025-12-13T03:58:46,465 Fetched page https://www.piwheels.org/simple/galaxy-config/ as text/html 2025-12-13T03:58:46,475 Skipping link: No binaries permitted for galaxy-config: 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Skipping link: not a file: https://pypi.org/simple/galaxy-config/ 2025-12-13T03:58:46,516 Given no hashes to check 1 links for project 'galaxy-config': discarding no candidates 2025-12-13T03:58:46,534 Collecting galaxy-config==25.1.dev0 2025-12-13T03:58:46,536 Created temporary directory: /tmp/pip-unpack-l6jj9x_p 2025-12-13T03:58:46,745 Downloading galaxy_config-25.1.dev0.tar.gz (245 kB) 2025-12-13T03:58:46,992 Added galaxy-config==25.1.dev0 from https://files.pythonhosted.org/packages/67/c5/23e4a0f873db8f48cba2053f5af86b5df95cb6541f18c9367547232015eb/galaxy_config-25.1.dev0.tar.gz to build tracker '/tmp/pip-build-tracker-6q8ycggs' 2025-12-13T03:58:46,994 Created temporary directory: /tmp/pip-build-env-378wve66 2025-12-13T03:58:46,999 Installing build dependencies: started 2025-12-13T03:58:47,000 Running command pip subprocess to install build dependencies 2025-12-13T03:58:48,163 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2025-12-13T03:58:48,766 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2025-12-13T03:58:48,788 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-12-13T03:58:50,533 Collecting setuptools 2025-12-13T03:58:50,632 Using cached https://www.piwheels.org/simple/setuptools/setuptools-80.9.0-py3-none-any.whl (1.2 MB) 2025-12-13T03:58:53,570 Installing collected packages: setuptools 2025-12-13T03:58:57,426 Successfully installed setuptools-80.9.0 2025-12-13T03:58:57,694 Installing build dependencies: finished with status 'done' 2025-12-13T03:58:57,700 Getting requirements to build wheel: started 2025-12-13T03:58:57,702 Running command Getting requirements to build wheel 2025-12-13T03:58:58,277 /tmp/pip-build-env-378wve66/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-12-13T03:58:58,277 !! 2025-12-13T03:58:58,278 ******************************************************************************** 2025-12-13T03:58:58,279 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-12-13T03:58:58,280 License :: OSI Approved :: Academic Free License (AFL) 2025-12-13T03:58:58,281 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-12-13T03:58:58,282 ******************************************************************************** 2025-12-13T03:58:58,283 !! 2025-12-13T03:58:58,284 self._finalize_license_expression() 2025-12-13T03:58:58,339 running egg_info 2025-12-13T03:58:58,346 writing galaxy_config.egg-info/PKG-INFO 2025-12-13T03:58:58,351 writing dependency_links to galaxy_config.egg-info/dependency_links.txt 2025-12-13T03:58:58,353 writing entry points to galaxy_config.egg-info/entry_points.txt 2025-12-13T03:58:58,354 writing requirements to galaxy_config.egg-info/requires.txt 2025-12-13T03:58:58,356 writing top-level names to galaxy_config.egg-info/top_level.txt 2025-12-13T03:58:58,384 reading manifest file 'galaxy_config.egg-info/SOURCES.txt' 2025-12-13T03:58:58,395 reading manifest template 'MANIFEST.in' 2025-12-13T03:58:58,403 adding license file 'LICENSE' 2025-12-13T03:58:58,408 writing manifest file 'galaxy_config.egg-info/SOURCES.txt' 2025-12-13T03:58:58,498 Getting requirements to build wheel: finished with status 'done' 2025-12-13T03:58:58,502 Created temporary directory: /tmp/pip-modern-metadata-2ygzuoq3 2025-12-13T03:58:58,504 Preparing metadata (pyproject.toml): started 2025-12-13T03:58:58,505 Running command Preparing metadata (pyproject.toml) 2025-12-13T03:58:59,051 /tmp/pip-build-env-378wve66/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-12-13T03:58:59,051 !! 2025-12-13T03:58:59,052 ******************************************************************************** 2025-12-13T03:58:59,053 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-12-13T03:58:59,054 License :: OSI Approved :: Academic Free License (AFL) 2025-12-13T03:58:59,055 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-12-13T03:58:59,055 ******************************************************************************** 2025-12-13T03:58:59,056 !! 2025-12-13T03:58:59,057 self._finalize_license_expression() 2025-12-13T03:58:59,077 running dist_info 2025-12-13T03:58:59,089 creating /tmp/pip-modern-metadata-2ygzuoq3/galaxy_config.egg-info 2025-12-13T03:58:59,090 writing /tmp/pip-modern-metadata-2ygzuoq3/galaxy_config.egg-info/PKG-INFO 2025-12-13T03:58:59,095 writing dependency_links to /tmp/pip-modern-metadata-2ygzuoq3/galaxy_config.egg-info/dependency_links.txt 2025-12-13T03:58:59,097 writing entry points to /tmp/pip-modern-metadata-2ygzuoq3/galaxy_config.egg-info/entry_points.txt 2025-12-13T03:58:59,098 writing requirements to /tmp/pip-modern-metadata-2ygzuoq3/galaxy_config.egg-info/requires.txt 2025-12-13T03:58:59,099 writing top-level names to /tmp/pip-modern-metadata-2ygzuoq3/galaxy_config.egg-info/top_level.txt 2025-12-13T03:58:59,101 writing manifest file '/tmp/pip-modern-metadata-2ygzuoq3/galaxy_config.egg-info/SOURCES.txt' 2025-12-13T03:58:59,127 reading manifest file '/tmp/pip-modern-metadata-2ygzuoq3/galaxy_config.egg-info/SOURCES.txt' 2025-12-13T03:58:59,130 reading manifest template 'MANIFEST.in' 2025-12-13T03:58:59,136 adding license file 'LICENSE' 2025-12-13T03:58:59,141 writing manifest file '/tmp/pip-modern-metadata-2ygzuoq3/galaxy_config.egg-info/SOURCES.txt' 2025-12-13T03:58:59,142 creating '/tmp/pip-modern-metadata-2ygzuoq3/galaxy_config-25.1.dev0.dist-info' 2025-12-13T03:58:59,280 Preparing metadata (pyproject.toml): finished with status 'done' 2025-12-13T03:58:59,287 Source in /tmp/pip-wheel-w70zn66y/galaxy-config_ce6ae80d7f1641a290309963d3accf83 has version 25.1.dev0, which satisfies requirement galaxy-config==25.1.dev0 from https://files.pythonhosted.org/packages/67/c5/23e4a0f873db8f48cba2053f5af86b5df95cb6541f18c9367547232015eb/galaxy_config-25.1.dev0.tar.gz 2025-12-13T03:58:59,288 Removed galaxy-config==25.1.dev0 from https://files.pythonhosted.org/packages/67/c5/23e4a0f873db8f48cba2053f5af86b5df95cb6541f18c9367547232015eb/galaxy_config-25.1.dev0.tar.gz from build tracker '/tmp/pip-build-tracker-6q8ycggs' 2025-12-13T03:58:59,297 Created temporary directory: /tmp/pip-unpack-0c7m_7fh 2025-12-13T03:58:59,298 Building wheels for collected packages: galaxy-config 2025-12-13T03:58:59,303 Created temporary directory: /tmp/pip-wheel-vbcedzia 2025-12-13T03:58:59,303 Destination directory: /tmp/pip-wheel-vbcedzia 2025-12-13T03:58:59,306 Building wheel for galaxy-config (pyproject.toml): started 2025-12-13T03:58:59,307 Running command Building wheel for galaxy-config (pyproject.toml) 2025-12-13T03:58:59,837 /tmp/pip-build-env-378wve66/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-12-13T03:58:59,838 !! 2025-12-13T03:58:59,839 ******************************************************************************** 2025-12-13T03:58:59,839 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-12-13T03:58:59,840 License :: OSI Approved :: Academic Free License (AFL) 2025-12-13T03:58:59,841 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-12-13T03:58:59,842 ******************************************************************************** 2025-12-13T03:58:59,843 !! 2025-12-13T03:58:59,843 self._finalize_license_expression() 2025-12-13T03:58:59,867 running bdist_wheel 2025-12-13T03:58:59,897 running build 2025-12-13T03:58:59,898 running build_py 2025-12-13T03:58:59,907 creating build/lib/galaxy 2025-12-13T03:58:59,909 copying galaxy/__init__.py -> build/lib/galaxy 2025-12-13T03:58:59,912 creating build/lib/galaxy/config 2025-12-13T03:58:59,913 copying galaxy/config/templates.py -> build/lib/galaxy/config 2025-12-13T03:58:59,915 copying galaxy/config/__init__.py -> build/lib/galaxy/config 2025-12-13T03:58:59,918 copying galaxy/config/script.py -> build/lib/galaxy/config 2025-12-13T03:58:59,921 copying galaxy/config/schema.py -> build/lib/galaxy/config 2025-12-13T03:58:59,923 copying galaxy/config/config_manage.py -> build/lib/galaxy/config 2025-12-13T03:58:59,925 running egg_info 2025-12-13T03:58:59,937 writing galaxy_config.egg-info/PKG-INFO 2025-12-13T03:58:59,941 writing dependency_links to galaxy_config.egg-info/dependency_links.txt 2025-12-13T03:58:59,943 writing entry points to galaxy_config.egg-info/entry_points.txt 2025-12-13T03:58:59,944 writing requirements to galaxy_config.egg-info/requires.txt 2025-12-13T03:58:59,945 writing top-level names to galaxy_config.egg-info/top_level.txt 2025-12-13T03:58:59,955 reading manifest file 'galaxy_config.egg-info/SOURCES.txt' 2025-12-13T03:58:59,960 reading manifest template 'MANIFEST.in' 2025-12-13T03:58:59,966 adding license file 'LICENSE' 2025-12-13T03:58:59,971 writing manifest file 'galaxy_config.egg-info/SOURCES.txt' 2025-12-13T03:58:59,974 /tmp/pip-build-env-378wve66/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'galaxy.config.sample' is absent from the `packages` configuration. 2025-12-13T03:58:59,974 !! 2025-12-13T03:58:59,976 ******************************************************************************** 2025-12-13T03:58:59,976 ############################ 2025-12-13T03:58:59,977 # Package would be ignored # 2025-12-13T03:58:59,977 ############################ 2025-12-13T03:58:59,978 Python recognizes 'galaxy.config.sample' as an importable package[^1], 2025-12-13T03:58:59,978 but it is absent from setuptools' `packages` configuration. 2025-12-13T03:58:59,979 This leads to an ambiguous overall configuration. If you want to distribute this 2025-12-13T03:58:59,980 package, please make sure that 'galaxy.config.sample' is explicitly added 2025-12-13T03:58:59,980 to the `packages` configuration field. 2025-12-13T03:58:59,982 Alternatively, you can also rely on setuptools' discovery methods 2025-12-13T03:58:59,982 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-12-13T03:58:59,983 instead of `find_packages(...)`/`find:`). 2025-12-13T03:58:59,984 You can read more about "package discovery" on setuptools documentation page: 2025-12-13T03:58:59,985 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-12-13T03:58:59,986 If you don't want 'galaxy.config.sample' to be distributed and are 2025-12-13T03:58:59,987 already explicitly excluding 'galaxy.config.sample' via 2025-12-13T03:58:59,987 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-12-13T03:58:59,987 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-12-13T03:58:59,988 combination with a more fine grained `package-data` configuration. 2025-12-13T03:58:59,989 You can read more about "package data files" on setuptools documentation page: 2025-12-13T03:58:59,990 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-12-13T03:58:59,991 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-12-13T03:58:59,991 even if it does not contain any `.py` files. 2025-12-13T03:58:59,992 On the other hand, currently there is no concept of package data 2025-12-13T03:58:59,992 directory, all directories are treated like packages. 2025-12-13T03:58:59,993 ******************************************************************************** 2025-12-13T03:58:59,993 !! 2025-12-13T03:58:59,994 check.warn(importable) 2025-12-13T03:58:59,995 /tmp/pip-build-env-378wve66/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'galaxy.config.schemas' is absent from the `packages` configuration. 2025-12-13T03:58:59,995 !! 2025-12-13T03:58:59,996 ******************************************************************************** 2025-12-13T03:58:59,996 ############################ 2025-12-13T03:58:59,997 # Package would be ignored # 2025-12-13T03:58:59,997 ############################ 2025-12-13T03:58:59,998 Python recognizes 'galaxy.config.schemas' as an importable package[^1], 2025-12-13T03:58:59,998 but it is absent from setuptools' `packages` configuration. 2025-12-13T03:58:59,999 This leads to an ambiguous overall configuration. If you want to distribute this 2025-12-13T03:59:00,000 package, please make sure that 'galaxy.config.schemas' is explicitly added 2025-12-13T03:59:00,000 to the `packages` configuration field. 2025-12-13T03:59:00,002 Alternatively, you can also rely on setuptools' discovery methods 2025-12-13T03:59:00,002 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-12-13T03:59:00,003 instead of `find_packages(...)`/`find:`). 2025-12-13T03:59:00,004 You can read more about "package discovery" on setuptools documentation page: 2025-12-13T03:59:00,005 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-12-13T03:59:00,006 If you don't want 'galaxy.config.schemas' to be distributed and are 2025-12-13T03:59:00,007 already explicitly excluding 'galaxy.config.schemas' via 2025-12-13T03:59:00,007 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-12-13T03:59:00,008 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-12-13T03:59:00,008 combination with a more fine grained `package-data` configuration. 2025-12-13T03:59:00,009 You can read more about "package data files" on setuptools documentation page: 2025-12-13T03:59:00,010 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-12-13T03:59:00,012 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-12-13T03:59:00,012 even if it does not contain any `.py` files. 2025-12-13T03:59:00,013 On the other hand, currently there is no concept of package data 2025-12-13T03:59:00,013 directory, all directories are treated like packages. 2025-12-13T03:59:00,014 ******************************************************************************** 2025-12-13T03:59:00,015 !! 2025-12-13T03:59:00,015 check.warn(importable) 2025-12-13T03:59:00,016 /tmp/pip-build-env-378wve66/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'galaxy.config.templates.mail' is absent from the `packages` configuration. 2025-12-13T03:59:00,016 !! 2025-12-13T03:59:00,017 ******************************************************************************** 2025-12-13T03:59:00,018 ############################ 2025-12-13T03:59:00,018 # Package would be ignored # 2025-12-13T03:59:00,018 ############################ 2025-12-13T03:59:00,019 Python recognizes 'galaxy.config.templates.mail' as an importable package[^1], 2025-12-13T03:59:00,019 but it is absent from setuptools' `packages` configuration. 2025-12-13T03:59:00,020 This leads to an ambiguous overall configuration. If you want to distribute this 2025-12-13T03:59:00,021 package, please make sure that 'galaxy.config.templates.mail' is explicitly added 2025-12-13T03:59:00,021 to the `packages` configuration field. 2025-12-13T03:59:00,022 Alternatively, you can also rely on setuptools' discovery methods 2025-12-13T03:59:00,023 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-12-13T03:59:00,023 instead of `find_packages(...)`/`find:`). 2025-12-13T03:59:00,024 You can read more about "package discovery" on setuptools documentation page: 2025-12-13T03:59:00,025 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-12-13T03:59:00,026 If you don't want 'galaxy.config.templates.mail' to be distributed and are 2025-12-13T03:59:00,027 already explicitly excluding 'galaxy.config.templates.mail' via 2025-12-13T03:59:00,027 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-12-13T03:59:00,028 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-12-13T03:59:00,028 combination with a more fine grained `package-data` configuration. 2025-12-13T03:59:00,030 You can read more about "package data files" on setuptools documentation page: 2025-12-13T03:59:00,031 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-12-13T03:59:00,032 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-12-13T03:59:00,033 even if it does not contain any `.py` files. 2025-12-13T03:59:00,033 On the other hand, currently there is no concept of package data 2025-12-13T03:59:00,034 directory, all directories are treated like packages. 2025-12-13T03:59:00,034 ******************************************************************************** 2025-12-13T03:59:00,035 !! 2025-12-13T03:59:00,036 check.warn(importable) 2025-12-13T03:59:00,036 /tmp/pip-build-env-378wve66/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'galaxy.config.templates.mail.notifications' is absent from the `packages` configuration. 2025-12-13T03:59:00,037 !! 2025-12-13T03:59:00,038 ******************************************************************************** 2025-12-13T03:59:00,038 ############################ 2025-12-13T03:59:00,039 # Package would be ignored # 2025-12-13T03:59:00,039 ############################ 2025-12-13T03:59:00,040 Python recognizes 'galaxy.config.templates.mail.notifications' as an importable package[^1], 2025-12-13T03:59:00,040 but it is absent from setuptools' `packages` configuration. 2025-12-13T03:59:00,041 This leads to an ambiguous overall configuration. If you want to distribute this 2025-12-13T03:59:00,042 package, please make sure that 'galaxy.config.templates.mail.notifications' is explicitly added 2025-12-13T03:59:00,042 to the `packages` configuration field. 2025-12-13T03:59:00,044 Alternatively, you can also rely on setuptools' discovery methods 2025-12-13T03:59:00,044 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-12-13T03:59:00,045 instead of `find_packages(...)`/`find:`). 2025-12-13T03:59:00,045 You can read more about "package discovery" on setuptools documentation page: 2025-12-13T03:59:00,046 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-12-13T03:59:00,047 If you don't want 'galaxy.config.templates.mail.notifications' to be distributed and are 2025-12-13T03:59:00,047 already explicitly excluding 'galaxy.config.templates.mail.notifications' via 2025-12-13T03:59:00,048 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-12-13T03:59:00,048 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-12-13T03:59:00,049 combination with a more fine grained `package-data` configuration. 2025-12-13T03:59:00,050 You can read more about "package data files" on setuptools documentation page: 2025-12-13T03:59:00,051 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-12-13T03:59:00,052 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-12-13T03:59:00,053 even if it does not contain any `.py` files. 2025-12-13T03:59:00,053 On the other hand, currently there is no concept of package data 2025-12-13T03:59:00,054 directory, all directories are treated like packages. 2025-12-13T03:59:00,054 ******************************************************************************** 2025-12-13T03:59:00,055 !! 2025-12-13T03:59:00,056 check.warn(importable) 2025-12-13T03:59:00,056 copying galaxy/py.typed -> build/lib/galaxy 2025-12-13T03:59:00,057 creating build/lib/galaxy/config/sample 2025-12-13T03:59:00,057 copying galaxy/config/sample/auth_conf.xml.sample -> build/lib/galaxy/config/sample 2025-12-13T03:59:00,058 copying galaxy/config/sample/build_sites.yml.sample -> build/lib/galaxy/config/sample 2025-12-13T03:59:00,058 copying galaxy/config/sample/container_resolvers.yml.sample -> build/lib/galaxy/config/sample 2025-12-13T03:59:00,059 copying galaxy/config/sample/data_manager_conf.xml.sample -> build/lib/galaxy/config/sample 2025-12-13T03:59:00,059 copying galaxy/config/sample/datatypes_conf.xml.sample -> build/lib/galaxy/config/sample 2025-12-13T03:59:00,060 copying galaxy/config/sample/disposable_email_blocklist.conf.sample -> build/lib/galaxy/config/sample 2025-12-13T03:59:00,060 copying galaxy/config/sample/environment_modules_mapping.yml.sample -> build/lib/galaxy/config/sample 2025-12-13T03:59:00,061 copying galaxy/config/sample/error_report.yml.sample -> build/lib/galaxy/config/sample 2025-12-13T03:59:00,061 copying galaxy/config/sample/file_sources_conf.yml.sample -> build/lib/galaxy/config/sample 2025-12-13T03:59:00,062 copying galaxy/config/sample/galaxy.yml.sample -> build/lib/galaxy/config/sample 2025-12-13T03:59:00,062 copying galaxy/config/sample/job_conf.sample.yml -> build/lib/galaxy/config/sample 2025-12-13T03:59:00,063 copying galaxy/config/sample/job_conf.xml.sample_advanced -> build/lib/galaxy/config/sample 2025-12-13T03:59:00,063 copying galaxy/config/sample/job_conf.xml.sample_basic -> build/lib/galaxy/config/sample 2025-12-13T03:59:00,064 copying galaxy/config/sample/job_resource_params_conf.xml.sample -> build/lib/galaxy/config/sample 2025-12-13T03:59:00,064 copying galaxy/config/sample/lmod_modules_mapping.yml.sample -> build/lib/galaxy/config/sample 2025-12-13T03:59:00,065 copying galaxy/config/sample/local_conda_mapping.yml.sample -> build/lib/galaxy/config/sample 2025-12-13T03:59:00,065 copying galaxy/config/sample/object_store_conf.sample.yml -> build/lib/galaxy/config/sample 2025-12-13T03:59:00,066 copying galaxy/config/sample/object_store_conf.xml.sample -> build/lib/galaxy/config/sample 2025-12-13T03:59:00,066 copying galaxy/config/sample/oidc_backends_config.xml.sample -> build/lib/galaxy/config/sample 2025-12-13T03:59:00,067 copying galaxy/config/sample/oidc_config.xml.sample -> build/lib/galaxy/config/sample 2025-12-13T03:59:00,067 copying galaxy/config/sample/reports.yml.sample -> build/lib/galaxy/config/sample 2025-12-13T03:59:00,068 copying galaxy/config/sample/themes_conf.yml.sample -> build/lib/galaxy/config/sample 2025-12-13T03:59:00,068 copying galaxy/config/sample/tool_conf.xml.sample -> build/lib/galaxy/config/sample 2025-12-13T03:59:00,069 copying galaxy/config/sample/tool_data_table_conf.xml.sample -> build/lib/galaxy/config/sample 2025-12-13T03:59:00,072 copying galaxy/config/sample/tool_destinations.yml.sample -> build/lib/galaxy/config/sample 2025-12-13T03:59:00,075 copying galaxy/config/sample/tool_recommendations_overwrite.yml.sample -> build/lib/galaxy/config/sample 2025-12-13T03:59:00,077 copying galaxy/config/sample/tool_shed.yml.sample -> build/lib/galaxy/config/sample 2025-12-13T03:59:00,080 copying galaxy/config/sample/tool_sheds_conf.xml.sample -> build/lib/galaxy/config/sample 2025-12-13T03:59:00,082 copying galaxy/config/sample/trs_servers_conf.yml.sample -> build/lib/galaxy/config/sample 2025-12-13T03:59:00,085 copying galaxy/config/sample/user_preferences_extra_conf.yml.sample -> build/lib/galaxy/config/sample 2025-12-13T03:59:00,088 copying galaxy/config/sample/workflow_resource_mapper_conf.yml.sample -> build/lib/galaxy/config/sample 2025-12-13T03:59:00,090 copying galaxy/config/sample/workflow_resource_params_conf.xml.sample -> build/lib/galaxy/config/sample 2025-12-13T03:59:00,092 copying galaxy/config/sample/workflow_schedulers_conf.xml.sample -> build/lib/galaxy/config/sample 2025-12-13T03:59:00,094 creating build/lib/galaxy/config/schemas 2025-12-13T03:59:00,095 copying galaxy/config/schemas/config_schema.yml -> build/lib/galaxy/config/schemas 2025-12-13T03:59:00,102 copying galaxy/config/schemas/job_config_schema.yml -> build/lib/galaxy/config/schemas 2025-12-13T03:59:00,104 copying galaxy/config/schemas/reports_config_schema.yml -> build/lib/galaxy/config/schemas 2025-12-13T03:59:00,107 copying galaxy/config/schemas/tool_shed_config_schema.yml -> build/lib/galaxy/config/schemas 2025-12-13T03:59:00,110 creating build/lib/galaxy/config/templates/mail 2025-12-13T03:59:00,112 copying galaxy/config/templates/mail/activation-email.html -> build/lib/galaxy/config/templates/mail 2025-12-13T03:59:00,114 copying galaxy/config/templates/mail/activation-email.txt -> build/lib/galaxy/config/templates/mail 2025-12-13T03:59:00,117 creating build/lib/galaxy/config/templates/mail/notifications 2025-12-13T03:59:00,118 copying galaxy/config/templates/mail/notifications/message-email.html -> build/lib/galaxy/config/templates/mail/notifications 2025-12-13T03:59:00,120 copying galaxy/config/templates/mail/notifications/message-email.txt -> build/lib/galaxy/config/templates/mail/notifications 2025-12-13T03:59:00,123 copying galaxy/config/templates/mail/notifications/new_shared_item-email.html -> build/lib/galaxy/config/templates/mail/notifications 2025-12-13T03:59:00,125 copying galaxy/config/templates/mail/notifications/new_shared_item-email.txt -> build/lib/galaxy/config/templates/mail/notifications 2025-12-13T03:59:00,144 installing to build/bdist.linux-armv7l/wheel 2025-12-13T03:59:00,145 running install 2025-12-13T03:59:00,169 running install_lib 2025-12-13T03:59:00,178 creating build/bdist.linux-armv7l/wheel 2025-12-13T03:59:00,180 creating build/bdist.linux-armv7l/wheel/galaxy 2025-12-13T03:59:00,181 copying build/lib/galaxy/__init__.py -> build/bdist.linux-armv7l/wheel/./galaxy 2025-12-13T03:59:00,184 creating build/bdist.linux-armv7l/wheel/galaxy/config 2025-12-13T03:59:00,185 copying build/lib/galaxy/config/templates.py -> build/bdist.linux-armv7l/wheel/./galaxy/config 2025-12-13T03:59:00,188 creating build/bdist.linux-armv7l/wheel/galaxy/config/schemas 2025-12-13T03:59:00,189 copying build/lib/galaxy/config/schemas/job_config_schema.yml -> build/bdist.linux-armv7l/wheel/./galaxy/config/schemas 2025-12-13T03:59:00,191 copying build/lib/galaxy/config/schemas/config_schema.yml -> build/bdist.linux-armv7l/wheel/./galaxy/config/schemas 2025-12-13T03:59:00,196 copying build/lib/galaxy/config/schemas/reports_config_schema.yml -> build/bdist.linux-armv7l/wheel/./galaxy/config/schemas 2025-12-13T03:59:00,198 copying build/lib/galaxy/config/schemas/tool_shed_config_schema.yml -> build/bdist.linux-armv7l/wheel/./galaxy/config/schemas 2025-12-13T03:59:00,201 copying build/lib/galaxy/config/__init__.py -> build/bdist.linux-armv7l/wheel/./galaxy/config 2025-12-13T03:59:00,205 creating build/bdist.linux-armv7l/wheel/galaxy/config/templates 2025-12-13T03:59:00,206 creating build/bdist.linux-armv7l/wheel/galaxy/config/templates/mail 2025-12-13T03:59:00,207 copying build/lib/galaxy/config/templates/mail/activation-email.html -> build/bdist.linux-armv7l/wheel/./galaxy/config/templates/mail 2025-12-13T03:59:00,209 copying build/lib/galaxy/config/templates/mail/activation-email.txt -> build/bdist.linux-armv7l/wheel/./galaxy/config/templates/mail 2025-12-13T03:59:00,212 creating build/bdist.linux-armv7l/wheel/galaxy/config/templates/mail/notifications 2025-12-13T03:59:00,213 copying build/lib/galaxy/config/templates/mail/notifications/new_shared_item-email.html -> build/bdist.linux-armv7l/wheel/./galaxy/config/templates/mail/notifications 2025-12-13T03:59:00,215 copying build/lib/galaxy/config/templates/mail/notifications/new_shared_item-email.txt -> build/bdist.linux-armv7l/wheel/./galaxy/config/templates/mail/notifications 2025-12-13T03:59:00,217 copying build/lib/galaxy/config/templates/mail/notifications/message-email.txt -> build/bdist.linux-armv7l/wheel/./galaxy/config/templates/mail/notifications 2025-12-13T03:59:00,219 copying build/lib/galaxy/config/templates/mail/notifications/message-email.html -> build/bdist.linux-armv7l/wheel/./galaxy/config/templates/mail/notifications 2025-12-13T03:59:00,221 copying build/lib/galaxy/config/script.py -> build/bdist.linux-armv7l/wheel/./galaxy/config 2025-12-13T03:59:00,224 creating build/bdist.linux-armv7l/wheel/galaxy/config/sample 2025-12-13T03:59:00,225 copying build/lib/galaxy/config/sample/tool_sheds_conf.xml.sample -> build/bdist.linux-armv7l/wheel/./galaxy/config/sample 2025-12-13T03:59:00,227 copying build/lib/galaxy/config/sample/job_conf.sample.yml -> build/bdist.linux-armv7l/wheel/./galaxy/config/sample 2025-12-13T03:59:00,230 copying build/lib/galaxy/config/sample/reports.yml.sample -> build/bdist.linux-armv7l/wheel/./galaxy/config/sample 2025-12-13T03:59:00,232 copying build/lib/galaxy/config/sample/oidc_config.xml.sample -> build/bdist.linux-armv7l/wheel/./galaxy/config/sample 2025-12-13T03:59:00,234 copying build/lib/galaxy/config/sample/tool_conf.xml.sample -> build/bdist.linux-armv7l/wheel/./galaxy/config/sample 2025-12-13T03:59:00,236 copying build/lib/galaxy/config/sample/tool_data_table_conf.xml.sample -> build/bdist.linux-armv7l/wheel/./galaxy/config/sample 2025-12-13T03:59:00,238 copying build/lib/galaxy/config/sample/disposable_email_blocklist.conf.sample -> build/bdist.linux-armv7l/wheel/./galaxy/config/sample 2025-12-13T03:59:00,240 copying build/lib/galaxy/config/sample/object_store_conf.sample.yml -> build/bdist.linux-armv7l/wheel/./galaxy/config/sample 2025-12-13T03:59:00,243 copying build/lib/galaxy/config/sample/data_manager_conf.xml.sample -> build/bdist.linux-armv7l/wheel/./galaxy/config/sample 2025-12-13T03:59:00,245 copying build/lib/galaxy/config/sample/object_store_conf.xml.sample -> build/bdist.linux-armv7l/wheel/./galaxy/config/sample 2025-12-13T03:59:00,247 copying build/lib/galaxy/config/sample/auth_conf.xml.sample -> build/bdist.linux-armv7l/wheel/./galaxy/config/sample 2025-12-13T03:59:00,250 copying build/lib/galaxy/config/sample/environment_modules_mapping.yml.sample -> build/bdist.linux-armv7l/wheel/./galaxy/config/sample 2025-12-13T03:59:00,252 copying build/lib/galaxy/config/sample/build_sites.yml.sample -> build/bdist.linux-armv7l/wheel/./galaxy/config/sample 2025-12-13T03:59:00,254 copying build/lib/galaxy/config/sample/lmod_modules_mapping.yml.sample -> build/bdist.linux-armv7l/wheel/./galaxy/config/sample 2025-12-13T03:59:00,256 copying build/lib/galaxy/config/sample/container_resolvers.yml.sample -> build/bdist.linux-armv7l/wheel/./galaxy/config/sample 2025-12-13T03:59:00,258 copying build/lib/galaxy/config/sample/file_sources_conf.yml.sample -> build/bdist.linux-armv7l/wheel/./galaxy/config/sample 2025-12-13T03:59:00,260 copying build/lib/galaxy/config/sample/user_preferences_extra_conf.yml.sample -> build/bdist.linux-armv7l/wheel/./galaxy/config/sample 2025-12-13T03:59:00,263 copying build/lib/galaxy/config/sample/job_resource_params_conf.xml.sample -> build/bdist.linux-armv7l/wheel/./galaxy/config/sample 2025-12-13T03:59:00,264 copying build/lib/galaxy/config/sample/datatypes_conf.xml.sample -> build/bdist.linux-armv7l/wheel/./galaxy/config/sample 2025-12-13T03:59:00,268 copying build/lib/galaxy/config/sample/job_conf.xml.sample_basic -> build/bdist.linux-armv7l/wheel/./galaxy/config/sample 2025-12-13T03:59:00,270 copying build/lib/galaxy/config/sample/tool_recommendations_overwrite.yml.sample -> build/bdist.linux-armv7l/wheel/./galaxy/config/sample 2025-12-13T03:59:00,272 copying build/lib/galaxy/config/sample/workflow_resource_mapper_conf.yml.sample -> build/bdist.linux-armv7l/wheel/./galaxy/config/sample 2025-12-13T03:59:00,274 copying build/lib/galaxy/config/sample/local_conda_mapping.yml.sample -> build/bdist.linux-armv7l/wheel/./galaxy/config/sample 2025-12-13T03:59:00,276 copying build/lib/galaxy/config/sample/galaxy.yml.sample -> build/bdist.linux-armv7l/wheel/./galaxy/config/sample 2025-12-13T03:59:00,281 copying build/lib/galaxy/config/sample/themes_conf.yml.sample -> build/bdist.linux-armv7l/wheel/./galaxy/config/sample 2025-12-13T03:59:00,283 copying build/lib/galaxy/config/sample/workflow_resource_params_conf.xml.sample -> build/bdist.linux-armv7l/wheel/./galaxy/config/sample 2025-12-13T03:59:00,285 copying build/lib/galaxy/config/sample/workflow_schedulers_conf.xml.sample -> build/bdist.linux-armv7l/wheel/./galaxy/config/sample 2025-12-13T03:59:00,286 copying build/lib/galaxy/config/sample/trs_servers_conf.yml.sample -> build/bdist.linux-armv7l/wheel/./galaxy/config/sample 2025-12-13T03:59:00,288 copying build/lib/galaxy/config/sample/error_report.yml.sample -> build/bdist.linux-armv7l/wheel/./galaxy/config/sample 2025-12-13T03:59:00,291 copying build/lib/galaxy/config/sample/tool_destinations.yml.sample -> build/bdist.linux-armv7l/wheel/./galaxy/config/sample 2025-12-13T03:59:00,293 copying build/lib/galaxy/config/sample/oidc_backends_config.xml.sample -> build/bdist.linux-armv7l/wheel/./galaxy/config/sample 2025-12-13T03:59:00,295 copying build/lib/galaxy/config/sample/job_conf.xml.sample_advanced -> build/bdist.linux-armv7l/wheel/./galaxy/config/sample 2025-12-13T03:59:00,299 copying build/lib/galaxy/config/sample/tool_shed.yml.sample -> build/bdist.linux-armv7l/wheel/./galaxy/config/sample 2025-12-13T03:59:00,301 copying build/lib/galaxy/config/schema.py -> build/bdist.linux-armv7l/wheel/./galaxy/config 2025-12-13T03:59:00,304 copying build/lib/galaxy/config/config_manage.py -> build/bdist.linux-armv7l/wheel/./galaxy/config 2025-12-13T03:59:00,306 copying build/lib/galaxy/py.typed -> build/bdist.linux-armv7l/wheel/./galaxy 2025-12-13T03:59:00,308 running install_egg_info 2025-12-13T03:59:00,321 Copying galaxy_config.egg-info to build/bdist.linux-armv7l/wheel/./galaxy_config-25.1.dev0-py3.11.egg-info 2025-12-13T03:59:00,334 running install_scripts 2025-12-13T03:59:00,347 creating build/bdist.linux-armv7l/wheel/galaxy_config-25.1.dev0.dist-info/WHEEL 2025-12-13T03:59:00,350 creating '/tmp/pip-wheel-vbcedzia/.tmp-ie0pnce1/galaxy_config-25.1.dev0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-12-13T03:59:00,352 adding 'galaxy/__init__.py' 2025-12-13T03:59:00,353 adding 'galaxy/py.typed' 2025-12-13T03:59:00,363 adding 'galaxy/config/__init__.py' 2025-12-13T03:59:00,366 adding 'galaxy/config/config_manage.py' 2025-12-13T03:59:00,368 adding 'galaxy/config/schema.py' 2025-12-13T03:59:00,369 adding 'galaxy/config/script.py' 2025-12-13T03:59:00,371 adding 'galaxy/config/templates.py' 2025-12-13T03:59:00,374 adding 'galaxy/config/sample/auth_conf.xml.sample' 2025-12-13T03:59:00,375 adding 'galaxy/config/sample/build_sites.yml.sample' 2025-12-13T03:59:00,377 adding 'galaxy/config/sample/container_resolvers.yml.sample' 2025-12-13T03:59:00,378 adding 'galaxy/config/sample/data_manager_conf.xml.sample' 2025-12-13T03:59:00,388 adding 'galaxy/config/sample/datatypes_conf.xml.sample' 2025-12-13T03:59:00,390 adding 'galaxy/config/sample/disposable_email_blocklist.conf.sample' 2025-12-13T03:59:00,392 adding 'galaxy/config/sample/environment_modules_mapping.yml.sample' 2025-12-13T03:59:00,393 adding 'galaxy/config/sample/error_report.yml.sample' 2025-12-13T03:59:00,395 adding 'galaxy/config/sample/file_sources_conf.yml.sample' 2025-12-13T03:59:00,420 adding 'galaxy/config/sample/galaxy.yml.sample' 2025-12-13T03:59:00,430 adding 'galaxy/config/sample/job_conf.sample.yml' 2025-12-13T03:59:00,440 adding 'galaxy/config/sample/job_conf.xml.sample_advanced' 2025-12-13T03:59:00,442 adding 'galaxy/config/sample/job_conf.xml.sample_basic' 2025-12-13T03:59:00,443 adding 'galaxy/config/sample/job_resource_params_conf.xml.sample' 2025-12-13T03:59:00,444 adding 'galaxy/config/sample/lmod_modules_mapping.yml.sample' 2025-12-13T03:59:00,445 adding 'galaxy/config/sample/local_conda_mapping.yml.sample' 2025-12-13T03:59:00,449 adding 'galaxy/config/sample/object_store_conf.sample.yml' 2025-12-13T03:59:00,452 adding 'galaxy/config/sample/object_store_conf.xml.sample' 2025-12-13T03:59:00,454 adding 'galaxy/config/sample/oidc_backends_config.xml.sample' 2025-12-13T03:59:00,455 adding 'galaxy/config/sample/oidc_config.xml.sample' 2025-12-13T03:59:00,457 adding 'galaxy/config/sample/reports.yml.sample' 2025-12-13T03:59:00,458 adding 'galaxy/config/sample/themes_conf.yml.sample' 2025-12-13T03:59:00,460 adding 'galaxy/config/sample/tool_conf.xml.sample' 2025-12-13T03:59:00,461 adding 'galaxy/config/sample/tool_data_table_conf.xml.sample' 2025-12-13T03:59:00,463 adding 'galaxy/config/sample/tool_destinations.yml.sample' 2025-12-13T03:59:00,464 adding 'galaxy/config/sample/tool_recommendations_overwrite.yml.sample' 2025-12-13T03:59:00,467 adding 'galaxy/config/sample/tool_shed.yml.sample' 2025-12-13T03:59:00,469 adding 'galaxy/config/sample/tool_sheds_conf.xml.sample' 2025-12-13T03:59:00,470 adding 'galaxy/config/sample/trs_servers_conf.yml.sample' 2025-12-13T03:59:00,472 adding 'galaxy/config/sample/user_preferences_extra_conf.yml.sample' 2025-12-13T03:59:00,473 adding 'galaxy/config/sample/workflow_resource_mapper_conf.yml.sample' 2025-12-13T03:59:00,474 adding 'galaxy/config/sample/workflow_resource_params_conf.xml.sample' 2025-12-13T03:59:00,476 adding 'galaxy/config/sample/workflow_schedulers_conf.xml.sample' 2025-12-13T03:59:00,498 adding 'galaxy/config/schemas/config_schema.yml' 2025-12-13T03:59:00,500 adding 'galaxy/config/schemas/job_config_schema.yml' 2025-12-13T03:59:00,502 adding 'galaxy/config/schemas/reports_config_schema.yml' 2025-12-13T03:59:00,505 adding 'galaxy/config/schemas/tool_shed_config_schema.yml' 2025-12-13T03:59:00,508 adding 'galaxy/config/templates/mail/activation-email.html' 2025-12-13T03:59:00,510 adding 'galaxy/config/templates/mail/activation-email.txt' 2025-12-13T03:59:00,512 adding 'galaxy/config/templates/mail/notifications/message-email.html' 2025-12-13T03:59:00,513 adding 'galaxy/config/templates/mail/notifications/message-email.txt' 2025-12-13T03:59:00,515 adding 'galaxy/config/templates/mail/notifications/new_shared_item-email.html' 2025-12-13T03:59:00,516 adding 'galaxy/config/templates/mail/notifications/new_shared_item-email.txt' 2025-12-13T03:59:00,521 adding 'galaxy_config-25.1.dev0.dist-info/licenses/LICENSE' 2025-12-13T03:59:00,524 adding 'galaxy_config-25.1.dev0.dist-info/METADATA' 2025-12-13T03:59:00,526 adding 'galaxy_config-25.1.dev0.dist-info/WHEEL' 2025-12-13T03:59:00,527 adding 'galaxy_config-25.1.dev0.dist-info/entry_points.txt' 2025-12-13T03:59:00,527 adding 'galaxy_config-25.1.dev0.dist-info/top_level.txt' 2025-12-13T03:59:00,529 adding 'galaxy_config-25.1.dev0.dist-info/RECORD' 2025-12-13T03:59:00,533 removing build/bdist.linux-armv7l/wheel 2025-12-13T03:59:00,642 Building wheel for galaxy-config (pyproject.toml): finished with status 'done' 2025-12-13T03:59:00,652 Created wheel for galaxy-config: filename=galaxy_config-25.1.dev0-py3-none-any.whl size=254904 sha256=36f0d34e04814ca955d916083f527c3d0aad391914e200317ef2b25729a89f7d 2025-12-13T03:59:00,653 Stored in directory: /tmp/pip-ephem-wheel-cache-baaksm_y/wheels/b6/df/ad/6c634b9763d500e12d64c5cfc1b96f530b50064aab9bf9354d 2025-12-13T03:59:00,670 Successfully built galaxy-config 2025-12-13T03:59:00,679 Removed build tracker: '/tmp/pip-build-tracker-6q8ycggs'