2025-12-17T15:14:52,019 Created temporary directory: /tmp/pip-ephem-wheel-cache-9r8phw99
2025-12-17T15:14:52,021 Created temporary directory: /tmp/pip-build-tracker-epf9oll9
2025-12-17T15:14:52,021 Initialized build tracking at /tmp/pip-build-tracker-epf9oll9
2025-12-17T15:14:52,022 Created build tracker: /tmp/pip-build-tracker-epf9oll9
2025-12-17T15:14:52,022 Entered build tracker: /tmp/pip-build-tracker-epf9oll9
2025-12-17T15:14:52,023 Created temporary directory: /tmp/pip-wheel-n_s1kvkl
2025-12-17T15:14:52,026 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2025-12-17T15:14:52,028 Created temporary directory: /tmp/pip-ephem-wheel-cache-u_a9g8oa
2025-12-17T15:14:52,049 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2025-12-17T15:14:52,053 2 location(s) to search for versions of phaselab:
2025-12-17T15:14:52,053 * https://pypi.org/simple/phaselab/
2025-12-17T15:14:52,053 * https://www.piwheels.org/simple/phaselab/
2025-12-17T15:14:52,054 Fetching project page and analyzing links: https://pypi.org/simple/phaselab/
2025-12-17T15:14:52,055 Getting page https://pypi.org/simple/phaselab/
2025-12-17T15:14:52,056 Found index url https://pypi.org/simple
2025-12-17T15:14:52,270 Fetched page https://pypi.org/simple/phaselab/ as application/vnd.pypi.simple.v1+json
2025-12-17T15:14:52,273   Skipping link: No binaries permitted for phaselab: https://files.pythonhosted.org/packages/b6/e2/33bb7425f0acf376512de7b1c27938eae72950196641c388de6eae25cfe1/phaselab-0.1.0-py3-none-any.whl (from https://pypi.org/simple/phaselab/) (requires-python:>=3.9)
2025-12-17T15:14:52,274   Found link https://files.pythonhosted.org/packages/74/38/29a1dde57365217ae417e73c0ad7b6f6bc476f73e1d552cda82d03577f5e/phaselab-0.1.0.tar.gz (from https://pypi.org/simple/phaselab/) (requires-python:>=3.9), version: 0.1.0
2025-12-17T15:14:52,275   Skipping link: No binaries permitted for phaselab: https://files.pythonhosted.org/packages/32/43/303ad89d407e0db6cdf9196a4c09c6bb4b552e490a2518d359c56859335a/phaselab-0.4.0-py3-none-any.whl (from https://pypi.org/simple/phaselab/) (requires-python:>=3.9)
2025-12-17T15:14:52,276   Found link https://files.pythonhosted.org/packages/82/d8/160cd6c66becf17911ce65f77f284742cf39198b2364ec2f8b2e49401eb7/phaselab-0.4.0.tar.gz (from https://pypi.org/simple/phaselab/) (requires-python:>=3.9), version: 0.4.0
2025-12-17T15:14:52,277   Skipping link: No binaries permitted for phaselab: https://files.pythonhosted.org/packages/c2/25/311777db3eeb6f5b631043a9d3643bb00f16ab487de8f5e1b22dc1159677/phaselab-0.5.0-py3-none-any.whl (from https://pypi.org/simple/phaselab/) (requires-python:>=3.9)
2025-12-17T15:14:52,278   Found link https://files.pythonhosted.org/packages/04/df/ede60e1191201d5867f92f65a7de8ba5130f2c1b825e4e038bde987e9aca/phaselab-0.5.0.tar.gz (from https://pypi.org/simple/phaselab/) (requires-python:>=3.9), version: 0.5.0
2025-12-17T15:14:52,279   Skipping link: No binaries permitted for phaselab: https://files.pythonhosted.org/packages/14/a7/04589a042eac788a670357d49ccb4bb3d3c5a439b006be8e3cb1c6c95d87/phaselab-0.6.0-py3-none-any.whl (from https://pypi.org/simple/phaselab/) (requires-python:>=3.9)
2025-12-17T15:14:52,279   Found link https://files.pythonhosted.org/packages/db/36/901bbd34b61344c9f0007dcce5af3f3e5e8a5b692dcb66c54cd618a9c2a0/phaselab-0.6.0.tar.gz (from https://pypi.org/simple/phaselab/) (requires-python:>=3.9), version: 0.6.0
2025-12-17T15:14:52,280   Skipping link: No binaries permitted for phaselab: https://files.pythonhosted.org/packages/c5/92/ba603548fb21989e0291eefd5435d11857b7a017c4ce3b16f821b4efbe41/phaselab-0.6.1-py3-none-any.whl (from https://pypi.org/simple/phaselab/) (requires-python:>=3.9)
2025-12-17T15:14:52,281   Found link https://files.pythonhosted.org/packages/64/49/91730b719cc7b649c8a0935fd7db0f80df7f987b0c0a592badd51d83add7/phaselab-0.6.1.tar.gz (from https://pypi.org/simple/phaselab/) (requires-python:>=3.9), version: 0.6.1
2025-12-17T15:14:52,282   Skipping link: No binaries permitted for phaselab: https://files.pythonhosted.org/packages/94/66/e587f9e5c019c7d561a1ba9e7a07ca8f9d1af01a35cc825f3a313d882778/phaselab-1.0.0-py3-none-any.whl (from https://pypi.org/simple/phaselab/) (requires-python:>=3.9)
2025-12-17T15:14:52,283   Found link https://files.pythonhosted.org/packages/22/3b/00bd07007fc45c74f3730c12363696043636b7df9a6c605a869b29586b80/phaselab-1.0.0.tar.gz (from https://pypi.org/simple/phaselab/) (requires-python:>=3.9), version: 1.0.0
2025-12-17T15:14:52,284 Fetching project page and analyzing links: https://www.piwheels.org/simple/phaselab/
2025-12-17T15:14:52,285 Getting page https://www.piwheels.org/simple/phaselab/
2025-12-17T15:14:52,286 Found index url https://www.piwheels.org/simple
2025-12-17T15:14:52,448 Fetched page https://www.piwheels.org/simple/phaselab/ as text/html
2025-12-17T15:14:52,451   Skipping link: No binaries permitted for phaselab: https://www.piwheels.org/simple/phaselab/phaselab-0.6.1-py3-none-any.whl#sha256=80f162d66c2542f49a031270200dd4f09f6370e6e91baf0b7519f56c1e81559a (from https://www.piwheels.org/simple/phaselab/) (requires-python:>=3.9)
2025-12-17T15:14:52,451   Skipping link: No binaries permitted for phaselab: https://www.piwheels.org/simple/phaselab/phaselab-0.6.0-py3-none-any.whl#sha256=1f9e40f3bc8019fb806f6e8c728a44217693cbf7c141c1076656ba33395ea6b9 (from https://www.piwheels.org/simple/phaselab/) (requires-python:>=3.9)
2025-12-17T15:14:52,452   Skipping link: No binaries permitted for phaselab: https://www.piwheels.org/simple/phaselab/phaselab-0.5.0-py3-none-any.whl#sha256=33fcb6fab88f95025b81925c6e447fc7d46abe9bf29b31e94c33b675955a4e4f (from https://www.piwheels.org/simple/phaselab/) (requires-python:>=3.9)
2025-12-17T15:14:52,452   Skipping link: No binaries permitted for phaselab: https://www.piwheels.org/simple/phaselab/phaselab-0.4.0-py3-none-any.whl#sha256=0a12ecabfa282acc4637fed3689cb6d91f95ed7577c089ba63c9df70459f44e7 (from https://www.piwheels.org/simple/phaselab/) (requires-python:>=3.9)
2025-12-17T15:14:52,453   Skipping link: No binaries permitted for phaselab: https://www.piwheels.org/simple/phaselab/phaselab-0.1.0-py3-none-any.whl#sha256=975b7bb03c3ec5dc0db8728648c0d64e7fcd21cf012765eaeb03b90eb5df8783 (from https://www.piwheels.org/simple/phaselab/) (requires-python:>=3.9)
2025-12-17T15:14:52,454 Skipping link: not a file: https://www.piwheels.org/simple/phaselab/
2025-12-17T15:14:52,454 Skipping link: not a file: https://pypi.org/simple/phaselab/
2025-12-17T15:14:52,475 Given no hashes to check 1 links for project 'phaselab': discarding no candidates
2025-12-17T15:14:52,493 Collecting phaselab==1.0.0
2025-12-17T15:14:52,495   Created temporary directory: /tmp/pip-unpack-ykf7ls2j
2025-12-17T15:14:53,027   Downloading phaselab-1.0.0.tar.gz (372 kB)
2025-12-17T15:14:53,528   Added phaselab==1.0.0 from https://files.pythonhosted.org/packages/22/3b/00bd07007fc45c74f3730c12363696043636b7df9a6c605a869b29586b80/phaselab-1.0.0.tar.gz to build tracker '/tmp/pip-build-tracker-epf9oll9'
2025-12-17T15:14:53,535   Created temporary directory: /tmp/pip-build-env-mndyblqm
2025-12-17T15:14:53,539   Installing build dependencies: started
2025-12-17T15:14:53,540   Running command pip subprocess to install build dependencies
2025-12-17T15:14:54,658   Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11)
2025-12-17T15:14:55,254   DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2025-12-17T15:14:55,277   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2025-12-17T15:14:57,039   Collecting setuptools>=61.0
2025-12-17T15:14:57,156     Using cached https://www.piwheels.org/simple/setuptools/setuptools-80.9.0-py3-none-any.whl (1.2 MB)
2025-12-17T15:14:57,428   Collecting wheel
2025-12-17T15:14:57,445     Using cached https://www.piwheels.org/simple/wheel/wheel-0.45.1-py3-none-any.whl (72 kB)
2025-12-17T15:15:00,411   Installing collected packages: wheel, setuptools
2025-12-17T15:15:00,648     Creating /tmp/pip-build-env-mndyblqm/overlay/local/bin
2025-12-17T15:15:00,650     changing mode of /tmp/pip-build-env-mndyblqm/overlay/local/bin/wheel to 755
2025-12-17T15:15:04,241   Successfully installed setuptools-80.9.0 wheel-0.45.1
2025-12-17T15:15:04,514   Installing build dependencies: finished with status 'done'
2025-12-17T15:15:04,520   Getting requirements to build wheel: started
2025-12-17T15:15:04,521   Running command Getting requirements to build wheel
2025-12-17T15:15:05,135   /tmp/pip-build-env-mndyblqm/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated
2025-12-17T15:15:05,135   !!

2025-12-17T15:15:05,136           ********************************************************************************
2025-12-17T15:15:05,137           Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0).

2025-12-17T15:15:05,138           By 2026-Feb-18, you need to update your project and remove deprecated calls
2025-12-17T15:15:05,138           or your builds will no longer be supported.

2025-12-17T15:15:05,139           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2025-12-17T15:15:05,140           ********************************************************************************

2025-12-17T15:15:05,141   !!
2025-12-17T15:15:05,141     corresp(dist, value, root_dir)
2025-12-17T15:15:05,225   /tmp/pip-build-env-mndyblqm/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2025-12-17T15:15:05,226   !!

2025-12-17T15:15:05,227           ********************************************************************************
2025-12-17T15:15:05,228           Please consider removing the following classifiers in favor of a SPDX license expression:

2025-12-17T15:15:05,229           License :: OSI Approved :: MIT License

2025-12-17T15:15:05,230           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2025-12-17T15:15:05,231           ********************************************************************************

2025-12-17T15:15:05,232   !!
2025-12-17T15:15:05,233     dist._finalize_license_expression()
2025-12-17T15:15:05,234   /tmp/pip-build-env-mndyblqm/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2025-12-17T15:15:05,234   !!

2025-12-17T15:15:05,235           ********************************************************************************
2025-12-17T15:15:05,236           Please consider removing the following classifiers in favor of a SPDX license expression:

2025-12-17T15:15:05,237           License :: OSI Approved :: MIT License

2025-12-17T15:15:05,238           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2025-12-17T15:15:05,239           ********************************************************************************

2025-12-17T15:15:05,240   !!
2025-12-17T15:15:05,240     self._finalize_license_expression()
2025-12-17T15:15:05,241   running egg_info
2025-12-17T15:15:05,245   writing src/phaselab.egg-info/PKG-INFO
2025-12-17T15:15:05,255   writing dependency_links to src/phaselab.egg-info/dependency_links.txt
2025-12-17T15:15:05,257   writing entry points to src/phaselab.egg-info/entry_points.txt
2025-12-17T15:15:05,263   writing requirements to src/phaselab.egg-info/requires.txt
2025-12-17T15:15:05,265   writing top-level names to src/phaselab.egg-info/top_level.txt
2025-12-17T15:15:05,315   reading manifest file 'src/phaselab.egg-info/SOURCES.txt'
2025-12-17T15:15:05,324   adding license file 'LICENSE'
2025-12-17T15:15:05,333   writing manifest file 'src/phaselab.egg-info/SOURCES.txt'
2025-12-17T15:15:05,430   Getting requirements to build wheel: finished with status 'done'
2025-12-17T15:15:05,434   Created temporary directory: /tmp/pip-modern-metadata-8fl30egj
2025-12-17T15:15:05,436   Preparing metadata (pyproject.toml): started
2025-12-17T15:15:05,437   Running command Preparing metadata (pyproject.toml)
2025-12-17T15:15:06,006   /tmp/pip-build-env-mndyblqm/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated
2025-12-17T15:15:06,006   !!

2025-12-17T15:15:06,007           ********************************************************************************
2025-12-17T15:15:06,008           Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0).

2025-12-17T15:15:06,009           By 2026-Feb-18, you need to update your project and remove deprecated calls
2025-12-17T15:15:06,009           or your builds will no longer be supported.

2025-12-17T15:15:06,010           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2025-12-17T15:15:06,011           ********************************************************************************

2025-12-17T15:15:06,012   !!
2025-12-17T15:15:06,012     corresp(dist, value, root_dir)
2025-12-17T15:15:06,092   /tmp/pip-build-env-mndyblqm/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2025-12-17T15:15:06,093   !!

2025-12-17T15:15:06,094           ********************************************************************************
2025-12-17T15:15:06,095           Please consider removing the following classifiers in favor of a SPDX license expression:

2025-12-17T15:15:06,096           License :: OSI Approved :: MIT License

2025-12-17T15:15:06,097           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2025-12-17T15:15:06,098           ********************************************************************************

2025-12-17T15:15:06,099   !!
2025-12-17T15:15:06,100     dist._finalize_license_expression()
2025-12-17T15:15:06,100   /tmp/pip-build-env-mndyblqm/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2025-12-17T15:15:06,101   !!

2025-12-17T15:15:06,102           ********************************************************************************
2025-12-17T15:15:06,103           Please consider removing the following classifiers in favor of a SPDX license expression:

2025-12-17T15:15:06,104           License :: OSI Approved :: MIT License

2025-12-17T15:15:06,105           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2025-12-17T15:15:06,105           ********************************************************************************

2025-12-17T15:15:06,106   !!
2025-12-17T15:15:06,107     self._finalize_license_expression()
2025-12-17T15:15:06,108   running dist_info
2025-12-17T15:15:06,118   creating /tmp/pip-modern-metadata-8fl30egj/phaselab.egg-info
2025-12-17T15:15:06,119   writing /tmp/pip-modern-metadata-8fl30egj/phaselab.egg-info/PKG-INFO
2025-12-17T15:15:06,129   writing dependency_links to /tmp/pip-modern-metadata-8fl30egj/phaselab.egg-info/dependency_links.txt
2025-12-17T15:15:06,130   writing entry points to /tmp/pip-modern-metadata-8fl30egj/phaselab.egg-info/entry_points.txt
2025-12-17T15:15:06,136   writing requirements to /tmp/pip-modern-metadata-8fl30egj/phaselab.egg-info/requires.txt
2025-12-17T15:15:06,137   writing top-level names to /tmp/pip-modern-metadata-8fl30egj/phaselab.egg-info/top_level.txt
2025-12-17T15:15:06,139   writing manifest file '/tmp/pip-modern-metadata-8fl30egj/phaselab.egg-info/SOURCES.txt'
2025-12-17T15:15:06,183   reading manifest file '/tmp/pip-modern-metadata-8fl30egj/phaselab.egg-info/SOURCES.txt'
2025-12-17T15:15:06,185   adding license file 'LICENSE'
2025-12-17T15:15:06,192   writing manifest file '/tmp/pip-modern-metadata-8fl30egj/phaselab.egg-info/SOURCES.txt'
2025-12-17T15:15:06,193   creating '/tmp/pip-modern-metadata-8fl30egj/phaselab-1.0.0.dist-info'
2025-12-17T15:15:06,318   Preparing metadata (pyproject.toml): finished with status 'done'
2025-12-17T15:15:06,323   Source in /tmp/pip-wheel-n_s1kvkl/phaselab_e8e1317a3fba4b429acba46d4f59e2ff has version 1.0.0, which satisfies requirement phaselab==1.0.0 from https://files.pythonhosted.org/packages/22/3b/00bd07007fc45c74f3730c12363696043636b7df9a6c605a869b29586b80/phaselab-1.0.0.tar.gz
2025-12-17T15:15:06,324   Removed phaselab==1.0.0 from https://files.pythonhosted.org/packages/22/3b/00bd07007fc45c74f3730c12363696043636b7df9a6c605a869b29586b80/phaselab-1.0.0.tar.gz from build tracker '/tmp/pip-build-tracker-epf9oll9'
2025-12-17T15:15:06,330 Created temporary directory: /tmp/pip-unpack-mll7cuyn
2025-12-17T15:15:06,331 Building wheels for collected packages: phaselab
2025-12-17T15:15:06,335   Created temporary directory: /tmp/pip-wheel-ptdlaxva
2025-12-17T15:15:06,335   Destination directory: /tmp/pip-wheel-ptdlaxva
2025-12-17T15:15:06,337   Building wheel for phaselab (pyproject.toml): started
2025-12-17T15:15:06,339   Running command Building wheel for phaselab (pyproject.toml)
2025-12-17T15:15:06,889   /tmp/pip-build-env-mndyblqm/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated
2025-12-17T15:15:06,889   !!

2025-12-17T15:15:06,890           ********************************************************************************
2025-12-17T15:15:06,891           Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0).

2025-12-17T15:15:06,892           By 2026-Feb-18, you need to update your project and remove deprecated calls
2025-12-17T15:15:06,893           or your builds will no longer be supported.

2025-12-17T15:15:06,894           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2025-12-17T15:15:06,895           ********************************************************************************

2025-12-17T15:15:06,896   !!
2025-12-17T15:15:06,897     corresp(dist, value, root_dir)
2025-12-17T15:15:06,971   /tmp/pip-build-env-mndyblqm/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2025-12-17T15:15:06,972   !!

2025-12-17T15:15:06,973           ********************************************************************************
2025-12-17T15:15:06,974           Please consider removing the following classifiers in favor of a SPDX license expression:

2025-12-17T15:15:06,975           License :: OSI Approved :: MIT License

2025-12-17T15:15:06,976           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2025-12-17T15:15:06,976           ********************************************************************************

2025-12-17T15:15:06,977   !!
2025-12-17T15:15:06,978     dist._finalize_license_expression()
2025-12-17T15:15:06,978   /tmp/pip-build-env-mndyblqm/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2025-12-17T15:15:06,979   !!

2025-12-17T15:15:06,980           ********************************************************************************
2025-12-17T15:15:06,981           Please consider removing the following classifiers in favor of a SPDX license expression:

2025-12-17T15:15:06,982           License :: OSI Approved :: MIT License

2025-12-17T15:15:06,983           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2025-12-17T15:15:06,984           ********************************************************************************

2025-12-17T15:15:06,984   !!
2025-12-17T15:15:06,985     self._finalize_license_expression()
2025-12-17T15:15:06,985   running bdist_wheel
2025-12-17T15:15:07,000   running build
2025-12-17T15:15:07,001   running build_py
2025-12-17T15:15:07,007   creating build/lib/phaselab
2025-12-17T15:15:07,009   copying src/phaselab/__init__.py -> build/lib/phaselab
2025-12-17T15:15:07,012   creating build/lib/phaselab/quantum
2025-12-17T15:15:07,013   copying src/phaselab/quantum/grouping.py -> build/lib/phaselab/quantum
2025-12-17T15:15:07,015   copying src/phaselab/quantum/backend.py -> build/lib/phaselab/quantum
2025-12-17T15:15:07,017   copying src/phaselab/quantum/vqe.py -> build/lib/phaselab/quantum
2025-12-17T15:15:07,020   copying src/phaselab/quantum/coherence.py -> build/lib/phaselab/quantum
2025-12-17T15:15:07,022   copying src/phaselab/quantum/__init__.py -> build/lib/phaselab/quantum
2025-12-17T15:15:07,024   copying src/phaselab/quantum/config.py -> build/lib/phaselab/quantum
2025-12-17T15:15:07,026   copying src/phaselab/quantum/gpu.py -> build/lib/phaselab/quantum
2025-12-17T15:15:07,029   creating build/lib/phaselab/landscapes
2025-12-17T15:15:07,030   copying src/phaselab/landscapes/coherence.py -> build/lib/phaselab/landscapes
2025-12-17T15:15:07,032   copying src/phaselab/landscapes/io.py -> build/lib/phaselab/landscapes
2025-12-17T15:15:07,035   copying src/phaselab/landscapes/__init__.py -> build/lib/phaselab/landscapes
2025-12-17T15:15:07,037   copying src/phaselab/landscapes/core.py -> build/lib/phaselab/landscapes
2025-12-17T15:15:07,039   copying src/phaselab/landscapes/amplification.py -> build/lib/phaselab/landscapes
2025-12-17T15:15:07,042   copying src/phaselab/landscapes/classification.py -> build/lib/phaselab/landscapes
2025-12-17T15:15:07,045   creating build/lib/phaselab/spatial
2025-12-17T15:15:07,046   copying src/phaselab/spatial/regulatory.py -> build/lib/phaselab/spatial
2025-12-17T15:15:07,049   copying src/phaselab/spatial/__init__.py -> build/lib/phaselab/spatial
2025-12-17T15:15:07,051   copying src/phaselab/spatial/targeting.py -> build/lib/phaselab/spatial
2025-12-17T15:15:07,053   copying src/phaselab/spatial/validation.py -> build/lib/phaselab/spatial
2025-12-17T15:15:07,056   copying src/phaselab/spatial/integration.py -> build/lib/phaselab/spatial
2025-12-17T15:15:07,059   creating build/lib/phaselab/chromatin
2025-12-17T15:15:07,060   copying src/phaselab/chromatin/atac_integration.py -> build/lib/phaselab/chromatin
2025-12-17T15:15:07,063   copying src/phaselab/chromatin/tissue_models.py -> build/lib/phaselab/chromatin
2025-12-17T15:15:07,065   copying src/phaselab/chromatin/__init__.py -> build/lib/phaselab/chromatin
2025-12-17T15:15:07,067   copying src/phaselab/chromatin/methylation.py -> build/lib/phaselab/chromatin
2025-12-17T15:15:07,070   copying src/phaselab/chromatin/accessibility.py -> build/lib/phaselab/chromatin
2025-12-17T15:15:07,073   copying src/phaselab/chromatin/nucleosome.py -> build/lib/phaselab/chromatin
2025-12-17T15:15:07,075   copying src/phaselab/chromatin/integration.py -> build/lib/phaselab/chromatin
2025-12-17T15:15:07,078   creating build/lib/phaselab/microbio
2025-12-17T15:15:07,079   copying src/phaselab/microbio/drug.py -> build/lib/phaselab/microbio
2025-12-17T15:15:07,081   copying src/phaselab/microbio/crispri.py -> build/lib/phaselab/microbio
2025-12-17T15:15:07,084   copying src/phaselab/microbio/__init__.py -> build/lib/phaselab/microbio
2025-12-17T15:15:07,086   copying src/phaselab/microbio/tnseq.py -> build/lib/phaselab/microbio
2025-12-17T15:15:07,088   copying src/phaselab/microbio/fitness.py -> build/lib/phaselab/microbio
2025-12-17T15:15:07,091   creating build/lib/phaselab/delivery
2025-12-17T15:15:07,092   copying src/phaselab/delivery/immunogenicity.py -> build/lib/phaselab/delivery
2025-12-17T15:15:07,095   copying src/phaselab/delivery/__init__.py -> build/lib/phaselab/delivery
2025-12-17T15:15:07,096   copying src/phaselab/delivery/aav.py -> build/lib/phaselab/delivery
2025-12-17T15:15:07,099   creating build/lib/phaselab/trials
2025-12-17T15:15:07,100   copying src/phaselab/trials/__init__.py -> build/lib/phaselab/trials
2025-12-17T15:15:07,103   creating build/lib/phaselab/surf
2025-12-17T15:15:07,104   copying src/phaselab/surf/visualization.py -> build/lib/phaselab/surf
2025-12-17T15:15:07,106   copying src/phaselab/surf/pipeline.py -> build/lib/phaselab/surf
2025-12-17T15:15:07,109   copying src/phaselab/surf/coherence.py -> build/lib/phaselab/surf
2025-12-17T15:15:07,111   copying src/phaselab/surf/parser.py -> build/lib/phaselab/surf
2025-12-17T15:15:07,113   copying src/phaselab/surf/__init__.py -> build/lib/phaselab/surf
2025-12-17T15:15:07,116   creating build/lib/phaselab/chem
2025-12-17T15:15:07,117   copying src/phaselab/chem/binding.py -> build/lib/phaselab/chem
2025-12-17T15:15:07,119   copying src/phaselab/chem/__init__.py -> build/lib/phaselab/chem
2025-12-17T15:15:07,121   copying src/phaselab/chem/screening.py -> build/lib/phaselab/chem
2025-12-17T15:15:07,123   copying src/phaselab/chem/reaction.py -> build/lib/phaselab/chem
2025-12-17T15:15:07,126   creating build/lib/phaselab/context
2025-12-17T15:15:07,127   copying src/phaselab/context/__init__.py -> build/lib/phaselab/context
2025-12-17T15:15:07,129   copying src/phaselab/context/methylation.py -> build/lib/phaselab/context
2025-12-17T15:15:07,131   copying src/phaselab/context/histone.py -> build/lib/phaselab/context
2025-12-17T15:15:07,133   copying src/phaselab/context/stack.py -> build/lib/phaselab/context
2025-12-17T15:15:07,136   copying src/phaselab/context/chromatin.py -> build/lib/phaselab/context
2025-12-17T15:15:07,138   creating build/lib/phaselab/circadian
2025-12-17T15:15:07,139   copying src/phaselab/circadian/sms_model.py -> build/lib/phaselab/circadian
2025-12-17T15:15:07,142   copying src/phaselab/circadian/__init__.py -> build/lib/phaselab/circadian
2025-12-17T15:15:07,144   copying src/phaselab/circadian/kuramoto.py -> build/lib/phaselab/circadian
2025-12-17T15:15:07,146   copying src/phaselab/circadian/multi_tissue.py -> build/lib/phaselab/circadian
2025-12-17T15:15:07,148   creating build/lib/phaselab/integrations
2025-12-17T15:15:07,149   copying src/phaselab/integrations/__init__.py -> build/lib/phaselab/integrations
2025-12-17T15:15:07,152   creating build/lib/phaselab/protein
2025-12-17T15:15:07,153   copying src/phaselab/protein/mutscan.py -> build/lib/phaselab/protein
2025-12-17T15:15:07,155   copying src/phaselab/protein/binding.py -> build/lib/phaselab/protein
2025-12-17T15:15:07,158   copying src/phaselab/protein/__init__.py -> build/lib/phaselab/protein
2025-12-17T15:15:07,159   copying src/phaselab/protein/dynamics.py -> build/lib/phaselab/protein
2025-12-17T15:15:07,162   copying src/phaselab/protein/folding.py -> build/lib/phaselab/protein
2025-12-17T15:15:07,164   creating build/lib/phaselab/drug
2025-12-17T15:15:07,165   copying src/phaselab/drug/__init__.py -> build/lib/phaselab/drug
2025-12-17T15:15:07,167   copying src/phaselab/drug/variability.py -> build/lib/phaselab/drug
2025-12-17T15:15:07,170   copying src/phaselab/drug/pharmacokinetics.py -> build/lib/phaselab/drug
2025-12-17T15:15:07,172   copying src/phaselab/drug/chronotherapy.py -> build/lib/phaselab/drug
2025-12-17T15:15:07,176   creating build/lib/phaselab/crispr
2025-12-17T15:15:07,177   copying src/phaselab/crispr/multi_evidence.py -> build/lib/phaselab/crispr
2025-12-17T15:15:07,179   copying src/phaselab/crispr/enumerate.py -> build/lib/phaselab/crispr
2025-12-17T15:15:07,182   copying src/phaselab/crispr/transcriptional_phase.py -> build/lib/phaselab/crispr
2025-12-17T15:15:07,184   copying src/phaselab/crispr/coherence_utils.py -> build/lib/phaselab/crispr
2025-12-17T15:15:07,187   copying src/phaselab/crispr/quantum_discriminator.py -> build/lib/phaselab/crispr
2025-12-17T15:15:07,190   copying src/phaselab/crispr/region.py -> build/lib/phaselab/crispr
2025-12-17T15:15:07,192   copying src/phaselab/crispr/pipeline.py -> build/lib/phaselab/crispr
2025-12-17T15:15:07,195   copying src/phaselab/crispr/knockout.py -> build/lib/phaselab/crispr
2025-12-17T15:15:07,198   copying src/phaselab/crispr/__init__.py -> build/lib/phaselab/crispr
2025-12-17T15:15:07,200   copying src/phaselab/crispr/design.py -> build/lib/phaselab/crispr
2025-12-17T15:15:07,203   copying src/phaselab/crispr/interference.py -> build/lib/phaselab/crispr
2025-12-17T15:15:07,206   copying src/phaselab/crispr/prime_editing.py -> build/lib/phaselab/crispr
2025-12-17T15:15:07,208   copying src/phaselab/crispr/offtarget_geometry.py -> build/lib/phaselab/crispr
2025-12-17T15:15:07,211   copying src/phaselab/crispr/base_editing.py -> build/lib/phaselab/crispr
2025-12-17T15:15:07,214   copying src/phaselab/crispr/enhancer.py -> build/lib/phaselab/crispr
2025-12-17T15:15:07,217   copying src/phaselab/crispr/enhanced_pipeline.py -> build/lib/phaselab/crispr
2025-12-17T15:15:07,219   copying src/phaselab/crispr/editors.py -> build/lib/phaselab/crispr
2025-12-17T15:15:07,222   copying src/phaselab/crispr/crispor_integration.py -> build/lib/phaselab/crispr
2025-12-17T15:15:07,225   copying src/phaselab/crispr/binding_landscape.py -> build/lib/phaselab/crispr
2025-12-17T15:15:07,228   copying src/phaselab/crispr/multiguide.py -> build/lib/phaselab/crispr
2025-12-17T15:15:07,231   copying src/phaselab/crispr/scoring.py -> build/lib/phaselab/crispr
2025-12-17T15:15:07,234   copying src/phaselab/crispr/pam_scan.py -> build/lib/phaselab/crispr
2025-12-17T15:15:07,237   creating build/lib/phaselab/omics
2025-12-17T15:15:07,238   copying src/phaselab/omics/expression.py -> build/lib/phaselab/omics
2025-12-17T15:15:07,241   copying src/phaselab/omics/__init__.py -> build/lib/phaselab/omics
2025-12-17T15:15:07,243   copying src/phaselab/omics/atac.py -> build/lib/phaselab/omics
2025-12-17T15:15:07,246   copying src/phaselab/omics/chip.py -> build/lib/phaselab/omics
2025-12-17T15:15:07,249   creating build/lib/phaselab/targets
2025-12-17T15:15:07,250   copying src/phaselab/targets/__init__.py -> build/lib/phaselab/targets
2025-12-17T15:15:07,252   copying src/phaselab/targets/config.py -> build/lib/phaselab/targets
2025-12-17T15:15:07,255   creating build/lib/phaselab/io
2025-12-17T15:15:07,257   copying src/phaselab/io/export.py -> build/lib/phaselab/io
2025-12-17T15:15:07,259   copying src/phaselab/io/__init__.py -> build/lib/phaselab/io
2025-12-17T15:15:07,261   copying src/phaselab/io/report.py -> build/lib/phaselab/io
2025-12-17T15:15:07,264   creating build/lib/phaselab/core
2025-12-17T15:15:07,265   copying src/phaselab/core/coherence.py -> build/lib/phaselab/core
2025-12-17T15:15:07,268   copying src/phaselab/core/__init__.py -> build/lib/phaselab/core
2025-12-17T15:15:07,270   copying src/phaselab/core/constants.py -> build/lib/phaselab/core
2025-12-17T15:15:07,272   copying src/phaselab/core/hamiltonians.py -> build/lib/phaselab/core
2025-12-17T15:15:07,275   creating build/lib/phaselab/fusion
2025-12-17T15:15:07,277   copying src/phaselab/fusion/calibration.py -> build/lib/phaselab/fusion
2025-12-17T15:15:07,279   copying src/phaselab/fusion/__init__.py -> build/lib/phaselab/fusion
2025-12-17T15:15:07,282   copying src/phaselab/fusion/evidence.py -> build/lib/phaselab/fusion
2025-12-17T15:15:07,285   copying src/phaselab/fusion/fuser.py -> build/lib/phaselab/fusion
2025-12-17T15:15:07,289   creating build/lib/phaselab/therapy
2025-12-17T15:15:07,290   copying src/phaselab/therapy/__init__.py -> build/lib/phaselab/therapy
2025-12-17T15:15:07,292   copying src/phaselab/therapy/dosage.py -> build/lib/phaselab/therapy
2025-12-17T15:15:07,295   copying src/phaselab/therapy/efficacy.py -> build/lib/phaselab/therapy
2025-12-17T15:15:07,298   creating build/lib/phaselab/predictors
2025-12-17T15:15:07,300   copying src/phaselab/predictors/adapters.py -> build/lib/phaselab/predictors
2025-12-17T15:15:07,303   copying src/phaselab/predictors/protocol.py -> build/lib/phaselab/predictors
2025-12-17T15:15:07,306   copying src/phaselab/predictors/__init__.py -> build/lib/phaselab/predictors
2025-12-17T15:15:07,308   copying src/phaselab/predictors/stack.py -> build/lib/phaselab/predictors
2025-12-17T15:15:07,311   creating build/lib/phaselab/trials/sms
2025-12-17T15:15:07,312   copying src/phaselab/trials/sms/base_editing_trial.py -> build/lib/phaselab/trials/sms
2025-12-17T15:15:07,315   copying src/phaselab/trials/sms/pipeline.py -> build/lib/phaselab/trials/sms
2025-12-17T15:15:07,318   copying src/phaselab/trials/sms/__init__.py -> build/lib/phaselab/trials/sms
2025-12-17T15:15:07,320   copying src/phaselab/trials/sms/core.py -> build/lib/phaselab/trials/sms
2025-12-17T15:15:07,323   copying src/phaselab/trials/sms/knockout_trial.py -> build/lib/phaselab/trials/sms
2025-12-17T15:15:07,326   copying src/phaselab/trials/sms/circadian_simulation.py -> build/lib/phaselab/trials/sms
2025-12-17T15:15:07,328   copying src/phaselab/trials/sms/prime_editing_trial.py -> build/lib/phaselab/trials/sms
2025-12-17T15:15:07,331   copying src/phaselab/trials/sms/delivery_assessment.py -> build/lib/phaselab/trials/sms
2025-12-17T15:15:07,334   copying src/phaselab/trials/sms/crispra_trial.py -> build/lib/phaselab/trials/sms
2025-12-17T15:15:07,336   copying src/phaselab/trials/sms/crispri_trial.py -> build/lib/phaselab/trials/sms
2025-12-17T15:15:07,340   creating build/lib/phaselab/integrations/crispor
2025-12-17T15:15:07,341   copying src/phaselab/integrations/crispor/pipeline.py -> build/lib/phaselab/integrations/crispor
2025-12-17T15:15:07,344   copying src/phaselab/integrations/crispor/__init__.py -> build/lib/phaselab/integrations/crispor
2025-12-17T15:15:07,346   copying src/phaselab/integrations/crispor/offtarget_ir.py -> build/lib/phaselab/integrations/crispor
2025-12-17T15:15:07,350   copying src/phaselab/integrations/crispor/client.py -> build/lib/phaselab/integrations/crispor
2025-12-17T15:15:07,352   copying src/phaselab/integrations/crispor/parsers.py -> build/lib/phaselab/integrations/crispor
2025-12-17T15:15:07,355   running egg_info
2025-12-17T15:15:07,366   writing src/phaselab.egg-info/PKG-INFO
2025-12-17T15:15:07,376   writing dependency_links to src/phaselab.egg-info/dependency_links.txt
2025-12-17T15:15:07,378   writing entry points to src/phaselab.egg-info/entry_points.txt
2025-12-17T15:15:07,384   writing requirements to src/phaselab.egg-info/requires.txt
2025-12-17T15:15:07,385   writing top-level names to src/phaselab.egg-info/top_level.txt
2025-12-17T15:15:07,417   reading manifest file 'src/phaselab.egg-info/SOURCES.txt'
2025-12-17T15:15:07,427   adding license file 'LICENSE'
2025-12-17T15:15:07,435   writing manifest file 'src/phaselab.egg-info/SOURCES.txt'
2025-12-17T15:15:07,451   copying src/phaselab/targets/PTEN.yaml -> build/lib/phaselab/targets
2025-12-17T15:15:07,454   copying src/phaselab/targets/SCN2A.yaml -> build/lib/phaselab/targets
2025-12-17T15:15:07,456   copying src/phaselab/targets/RAI1.yaml -> build/lib/phaselab/targets
2025-12-17T15:15:07,481   installing to build/bdist.linux-armv7l/wheel
2025-12-17T15:15:07,482   running install
2025-12-17T15:15:07,505   running install_lib
2025-12-17T15:15:07,512   creating build/bdist.linux-armv7l/wheel
2025-12-17T15:15:07,514   creating build/bdist.linux-armv7l/wheel/phaselab
2025-12-17T15:15:07,516   creating build/bdist.linux-armv7l/wheel/phaselab/quantum
2025-12-17T15:15:07,518   copying build/lib/phaselab/quantum/grouping.py -> build/bdist.linux-armv7l/wheel/./phaselab/quantum
2025-12-17T15:15:07,520   copying build/lib/phaselab/quantum/backend.py -> build/bdist.linux-armv7l/wheel/./phaselab/quantum
2025-12-17T15:15:07,523   copying build/lib/phaselab/quantum/vqe.py -> build/bdist.linux-armv7l/wheel/./phaselab/quantum
2025-12-17T15:15:07,525   copying build/lib/phaselab/quantum/coherence.py -> build/bdist.linux-armv7l/wheel/./phaselab/quantum
2025-12-17T15:15:07,528   copying build/lib/phaselab/quantum/__init__.py -> build/bdist.linux-armv7l/wheel/./phaselab/quantum
2025-12-17T15:15:07,530   copying build/lib/phaselab/quantum/config.py -> build/bdist.linux-armv7l/wheel/./phaselab/quantum
2025-12-17T15:15:07,533   copying build/lib/phaselab/quantum/gpu.py -> build/bdist.linux-armv7l/wheel/./phaselab/quantum
2025-12-17T15:15:07,536   creating build/bdist.linux-armv7l/wheel/phaselab/landscapes
2025-12-17T15:15:07,537   copying build/lib/phaselab/landscapes/coherence.py -> build/bdist.linux-armv7l/wheel/./phaselab/landscapes
2025-12-17T15:15:07,540   copying build/lib/phaselab/landscapes/io.py -> build/bdist.linux-armv7l/wheel/./phaselab/landscapes
2025-12-17T15:15:07,542   copying build/lib/phaselab/landscapes/__init__.py -> build/bdist.linux-armv7l/wheel/./phaselab/landscapes
2025-12-17T15:15:07,544   copying build/lib/phaselab/landscapes/core.py -> build/bdist.linux-armv7l/wheel/./phaselab/landscapes
2025-12-17T15:15:07,547   copying build/lib/phaselab/landscapes/amplification.py -> build/bdist.linux-armv7l/wheel/./phaselab/landscapes
2025-12-17T15:15:07,550   copying build/lib/phaselab/landscapes/classification.py -> build/bdist.linux-armv7l/wheel/./phaselab/landscapes
2025-12-17T15:15:07,553   creating build/bdist.linux-armv7l/wheel/phaselab/spatial
2025-12-17T15:15:07,554   copying build/lib/phaselab/spatial/regulatory.py -> build/bdist.linux-armv7l/wheel/./phaselab/spatial
2025-12-17T15:15:07,556   copying build/lib/phaselab/spatial/__init__.py -> build/bdist.linux-armv7l/wheel/./phaselab/spatial
2025-12-17T15:15:07,558   copying build/lib/phaselab/spatial/targeting.py -> build/bdist.linux-armv7l/wheel/./phaselab/spatial
2025-12-17T15:15:07,561   copying build/lib/phaselab/spatial/validation.py -> build/bdist.linux-armv7l/wheel/./phaselab/spatial
2025-12-17T15:15:07,563   copying build/lib/phaselab/spatial/integration.py -> build/bdist.linux-armv7l/wheel/./phaselab/spatial
2025-12-17T15:15:07,566   creating build/bdist.linux-armv7l/wheel/phaselab/chromatin
2025-12-17T15:15:07,567   copying build/lib/phaselab/chromatin/atac_integration.py -> build/bdist.linux-armv7l/wheel/./phaselab/chromatin
2025-12-17T15:15:07,570   copying build/lib/phaselab/chromatin/tissue_models.py -> build/bdist.linux-armv7l/wheel/./phaselab/chromatin
2025-12-17T15:15:07,572   copying build/lib/phaselab/chromatin/__init__.py -> build/bdist.linux-armv7l/wheel/./phaselab/chromatin
2025-12-17T15:15:07,574   copying build/lib/phaselab/chromatin/methylation.py -> build/bdist.linux-armv7l/wheel/./phaselab/chromatin
2025-12-17T15:15:07,576   copying build/lib/phaselab/chromatin/accessibility.py -> build/bdist.linux-armv7l/wheel/./phaselab/chromatin
2025-12-17T15:15:07,578   copying build/lib/phaselab/chromatin/nucleosome.py -> build/bdist.linux-armv7l/wheel/./phaselab/chromatin
2025-12-17T15:15:07,581   copying build/lib/phaselab/chromatin/integration.py -> build/bdist.linux-armv7l/wheel/./phaselab/chromatin
2025-12-17T15:15:07,583   creating build/bdist.linux-armv7l/wheel/phaselab/microbio
2025-12-17T15:15:07,584   copying build/lib/phaselab/microbio/drug.py -> build/bdist.linux-armv7l/wheel/./phaselab/microbio
2025-12-17T15:15:07,587   copying build/lib/phaselab/microbio/crispri.py -> build/bdist.linux-armv7l/wheel/./phaselab/microbio
2025-12-17T15:15:07,589   copying build/lib/phaselab/microbio/__init__.py -> build/bdist.linux-armv7l/wheel/./phaselab/microbio
2025-12-17T15:15:07,591   copying build/lib/phaselab/microbio/tnseq.py -> build/bdist.linux-armv7l/wheel/./phaselab/microbio
2025-12-17T15:15:07,593   copying build/lib/phaselab/microbio/fitness.py -> build/bdist.linux-armv7l/wheel/./phaselab/microbio
2025-12-17T15:15:07,596   creating build/bdist.linux-armv7l/wheel/phaselab/delivery
2025-12-17T15:15:07,597   copying build/lib/phaselab/delivery/immunogenicity.py -> build/bdist.linux-armv7l/wheel/./phaselab/delivery
2025-12-17T15:15:07,600   copying build/lib/phaselab/delivery/__init__.py -> build/bdist.linux-armv7l/wheel/./phaselab/delivery
2025-12-17T15:15:07,601   copying build/lib/phaselab/delivery/aav.py -> build/bdist.linux-armv7l/wheel/./phaselab/delivery
2025-12-17T15:15:07,604   creating build/bdist.linux-armv7l/wheel/phaselab/trials
2025-12-17T15:15:07,606   creating build/bdist.linux-armv7l/wheel/phaselab/trials/sms
2025-12-17T15:15:07,607   copying build/lib/phaselab/trials/sms/base_editing_trial.py -> build/bdist.linux-armv7l/wheel/./phaselab/trials/sms
2025-12-17T15:15:07,609   copying build/lib/phaselab/trials/sms/pipeline.py -> build/bdist.linux-armv7l/wheel/./phaselab/trials/sms
2025-12-17T15:15:07,612   copying build/lib/phaselab/trials/sms/__init__.py -> build/bdist.linux-armv7l/wheel/./phaselab/trials/sms
2025-12-17T15:15:07,615   copying build/lib/phaselab/trials/sms/core.py -> build/bdist.linux-armv7l/wheel/./phaselab/trials/sms
2025-12-17T15:15:07,618   copying build/lib/phaselab/trials/sms/knockout_trial.py -> build/bdist.linux-armv7l/wheel/./phaselab/trials/sms
2025-12-17T15:15:07,621   copying build/lib/phaselab/trials/sms/circadian_simulation.py -> build/bdist.linux-armv7l/wheel/./phaselab/trials/sms
2025-12-17T15:15:07,624   copying build/lib/phaselab/trials/sms/prime_editing_trial.py -> build/bdist.linux-armv7l/wheel/./phaselab/trials/sms
2025-12-17T15:15:07,626   copying build/lib/phaselab/trials/sms/delivery_assessment.py -> build/bdist.linux-armv7l/wheel/./phaselab/trials/sms
2025-12-17T15:15:07,629   copying build/lib/phaselab/trials/sms/crispra_trial.py -> build/bdist.linux-armv7l/wheel/./phaselab/trials/sms
2025-12-17T15:15:07,632   copying build/lib/phaselab/trials/sms/crispri_trial.py -> build/bdist.linux-armv7l/wheel/./phaselab/trials/sms
2025-12-17T15:15:07,635   copying build/lib/phaselab/trials/__init__.py -> build/bdist.linux-armv7l/wheel/./phaselab/trials
2025-12-17T15:15:07,638   creating build/bdist.linux-armv7l/wheel/phaselab/surf
2025-12-17T15:15:07,639   copying build/lib/phaselab/surf/visualization.py -> build/bdist.linux-armv7l/wheel/./phaselab/surf
2025-12-17T15:15:07,642   copying build/lib/phaselab/surf/pipeline.py -> build/bdist.linux-armv7l/wheel/./phaselab/surf
2025-12-17T15:15:07,645   copying build/lib/phaselab/surf/coherence.py -> build/bdist.linux-armv7l/wheel/./phaselab/surf
2025-12-17T15:15:07,648   copying build/lib/phaselab/surf/parser.py -> build/bdist.linux-armv7l/wheel/./phaselab/surf
2025-12-17T15:15:07,651   copying build/lib/phaselab/surf/__init__.py -> build/bdist.linux-armv7l/wheel/./phaselab/surf
2025-12-17T15:15:07,654   creating build/bdist.linux-armv7l/wheel/phaselab/chem
2025-12-17T15:15:07,655   copying build/lib/phaselab/chem/binding.py -> build/bdist.linux-armv7l/wheel/./phaselab/chem
2025-12-17T15:15:07,658   copying build/lib/phaselab/chem/__init__.py -> build/bdist.linux-armv7l/wheel/./phaselab/chem
2025-12-17T15:15:07,661   copying build/lib/phaselab/chem/screening.py -> build/bdist.linux-armv7l/wheel/./phaselab/chem
2025-12-17T15:15:07,663   copying build/lib/phaselab/chem/reaction.py -> build/bdist.linux-armv7l/wheel/./phaselab/chem
2025-12-17T15:15:07,667   creating build/bdist.linux-armv7l/wheel/phaselab/context
2025-12-17T15:15:07,668   copying build/lib/phaselab/context/__init__.py -> build/bdist.linux-armv7l/wheel/./phaselab/context
2025-12-17T15:15:07,670   copying build/lib/phaselab/context/methylation.py -> build/bdist.linux-armv7l/wheel/./phaselab/context
2025-12-17T15:15:07,673   copying build/lib/phaselab/context/histone.py -> build/bdist.linux-armv7l/wheel/./phaselab/context
2025-12-17T15:15:07,676   copying build/lib/phaselab/context/stack.py -> build/bdist.linux-armv7l/wheel/./phaselab/context
2025-12-17T15:15:07,679   copying build/lib/phaselab/context/chromatin.py -> build/bdist.linux-armv7l/wheel/./phaselab/context
2025-12-17T15:15:07,682   creating build/bdist.linux-armv7l/wheel/phaselab/circadian
2025-12-17T15:15:07,684   copying build/lib/phaselab/circadian/sms_model.py -> build/bdist.linux-armv7l/wheel/./phaselab/circadian
2025-12-17T15:15:07,687   copying build/lib/phaselab/circadian/__init__.py -> build/bdist.linux-armv7l/wheel/./phaselab/circadian
2025-12-17T15:15:07,689   copying build/lib/phaselab/circadian/kuramoto.py -> build/bdist.linux-armv7l/wheel/./phaselab/circadian
2025-12-17T15:15:07,692   copying build/lib/phaselab/circadian/multi_tissue.py -> build/bdist.linux-armv7l/wheel/./phaselab/circadian
2025-12-17T15:15:07,695   creating build/bdist.linux-armv7l/wheel/phaselab/integrations
2025-12-17T15:15:07,696   copying build/lib/phaselab/integrations/__init__.py -> build/bdist.linux-armv7l/wheel/./phaselab/integrations
2025-12-17T15:15:07,699   creating build/bdist.linux-armv7l/wheel/phaselab/integrations/crispor
2025-12-17T15:15:07,701   copying build/lib/phaselab/integrations/crispor/pipeline.py -> build/bdist.linux-armv7l/wheel/./phaselab/integrations/crispor
2025-12-17T15:15:07,704   copying build/lib/phaselab/integrations/crispor/__init__.py -> build/bdist.linux-armv7l/wheel/./phaselab/integrations/crispor
2025-12-17T15:15:07,706   copying build/lib/phaselab/integrations/crispor/offtarget_ir.py -> build/bdist.linux-armv7l/wheel/./phaselab/integrations/crispor
2025-12-17T15:15:07,709   copying build/lib/phaselab/integrations/crispor/client.py -> build/bdist.linux-armv7l/wheel/./phaselab/integrations/crispor
2025-12-17T15:15:07,712   copying build/lib/phaselab/integrations/crispor/parsers.py -> build/bdist.linux-armv7l/wheel/./phaselab/integrations/crispor
2025-12-17T15:15:07,715   creating build/bdist.linux-armv7l/wheel/phaselab/protein
2025-12-17T15:15:07,716   copying build/lib/phaselab/protein/mutscan.py -> build/bdist.linux-armv7l/wheel/./phaselab/protein
2025-12-17T15:15:07,719   copying build/lib/phaselab/protein/binding.py -> build/bdist.linux-armv7l/wheel/./phaselab/protein
2025-12-17T15:15:07,721   copying build/lib/phaselab/protein/__init__.py -> build/bdist.linux-armv7l/wheel/./phaselab/protein
2025-12-17T15:15:07,723   copying build/lib/phaselab/protein/dynamics.py -> build/bdist.linux-armv7l/wheel/./phaselab/protein
2025-12-17T15:15:07,725   copying build/lib/phaselab/protein/folding.py -> build/bdist.linux-armv7l/wheel/./phaselab/protein
2025-12-17T15:15:07,727   copying build/lib/phaselab/__init__.py -> build/bdist.linux-armv7l/wheel/./phaselab
2025-12-17T15:15:07,730   creating build/bdist.linux-armv7l/wheel/phaselab/drug
2025-12-17T15:15:07,731   copying build/lib/phaselab/drug/__init__.py -> build/bdist.linux-armv7l/wheel/./phaselab/drug
2025-12-17T15:15:07,733   copying build/lib/phaselab/drug/variability.py -> build/bdist.linux-armv7l/wheel/./phaselab/drug
2025-12-17T15:15:07,735   copying build/lib/phaselab/drug/pharmacokinetics.py -> build/bdist.linux-armv7l/wheel/./phaselab/drug
2025-12-17T15:15:07,738   copying build/lib/phaselab/drug/chronotherapy.py -> build/bdist.linux-armv7l/wheel/./phaselab/drug
2025-12-17T15:15:07,741   creating build/bdist.linux-armv7l/wheel/phaselab/crispr
2025-12-17T15:15:07,742   copying build/lib/phaselab/crispr/multi_evidence.py -> build/bdist.linux-armv7l/wheel/./phaselab/crispr
2025-12-17T15:15:07,744   copying build/lib/phaselab/crispr/enumerate.py -> build/bdist.linux-armv7l/wheel/./phaselab/crispr
2025-12-17T15:15:07,747   copying build/lib/phaselab/crispr/transcriptional_phase.py -> build/bdist.linux-armv7l/wheel/./phaselab/crispr
2025-12-17T15:15:07,755   copying build/lib/phaselab/crispr/coherence_utils.py -> build/bdist.linux-armv7l/wheel/./phaselab/crispr
2025-12-17T15:15:07,757   copying build/lib/phaselab/crispr/quantum_discriminator.py -> build/bdist.linux-armv7l/wheel/./phaselab/crispr
2025-12-17T15:15:07,760   copying build/lib/phaselab/crispr/region.py -> build/bdist.linux-armv7l/wheel/./phaselab/crispr
2025-12-17T15:15:07,762   copying build/lib/phaselab/crispr/pipeline.py -> build/bdist.linux-armv7l/wheel/./phaselab/crispr
2025-12-17T15:15:07,764   copying build/lib/phaselab/crispr/knockout.py -> build/bdist.linux-armv7l/wheel/./phaselab/crispr
2025-12-17T15:15:07,767   copying build/lib/phaselab/crispr/__init__.py -> build/bdist.linux-armv7l/wheel/./phaselab/crispr
2025-12-17T15:15:07,769   copying build/lib/phaselab/crispr/design.py -> build/bdist.linux-armv7l/wheel/./phaselab/crispr
2025-12-17T15:15:07,771   copying build/lib/phaselab/crispr/interference.py -> build/bdist.linux-armv7l/wheel/./phaselab/crispr
2025-12-17T15:15:07,774   copying build/lib/phaselab/crispr/prime_editing.py -> build/bdist.linux-armv7l/wheel/./phaselab/crispr
2025-12-17T15:15:07,776   copying build/lib/phaselab/crispr/offtarget_geometry.py -> build/bdist.linux-armv7l/wheel/./phaselab/crispr
2025-12-17T15:15:07,779   copying build/lib/phaselab/crispr/base_editing.py -> build/bdist.linux-armv7l/wheel/./phaselab/crispr
2025-12-17T15:15:07,781   copying build/lib/phaselab/crispr/enhancer.py -> build/bdist.linux-armv7l/wheel/./phaselab/crispr
2025-12-17T15:15:07,783   copying build/lib/phaselab/crispr/enhanced_pipeline.py -> build/bdist.linux-armv7l/wheel/./phaselab/crispr
2025-12-17T15:15:07,786   copying build/lib/phaselab/crispr/editors.py -> build/bdist.linux-armv7l/wheel/./phaselab/crispr
2025-12-17T15:15:07,788   copying build/lib/phaselab/crispr/crispor_integration.py -> build/bdist.linux-armv7l/wheel/./phaselab/crispr
2025-12-17T15:15:07,790   copying build/lib/phaselab/crispr/binding_landscape.py -> build/bdist.linux-armv7l/wheel/./phaselab/crispr
2025-12-17T15:15:07,793   copying build/lib/phaselab/crispr/multiguide.py -> build/bdist.linux-armv7l/wheel/./phaselab/crispr
2025-12-17T15:15:07,795   copying build/lib/phaselab/crispr/scoring.py -> build/bdist.linux-armv7l/wheel/./phaselab/crispr
2025-12-17T15:15:07,798   copying build/lib/phaselab/crispr/pam_scan.py -> build/bdist.linux-armv7l/wheel/./phaselab/crispr
2025-12-17T15:15:07,801   creating build/bdist.linux-armv7l/wheel/phaselab/omics
2025-12-17T15:15:07,802   copying build/lib/phaselab/omics/expression.py -> build/bdist.linux-armv7l/wheel/./phaselab/omics
2025-12-17T15:15:07,804   copying build/lib/phaselab/omics/__init__.py -> build/bdist.linux-armv7l/wheel/./phaselab/omics
2025-12-17T15:15:07,806   copying build/lib/phaselab/omics/atac.py -> build/bdist.linux-armv7l/wheel/./phaselab/omics
2025-12-17T15:15:07,808   copying build/lib/phaselab/omics/chip.py -> build/bdist.linux-armv7l/wheel/./phaselab/omics
2025-12-17T15:15:07,811   creating build/bdist.linux-armv7l/wheel/phaselab/targets
2025-12-17T15:15:07,812   copying build/lib/phaselab/targets/PTEN.yaml -> build/bdist.linux-armv7l/wheel/./phaselab/targets
2025-12-17T15:15:07,814   copying build/lib/phaselab/targets/SCN2A.yaml -> build/bdist.linux-armv7l/wheel/./phaselab/targets
2025-12-17T15:15:07,816   copying build/lib/phaselab/targets/__init__.py -> build/bdist.linux-armv7l/wheel/./phaselab/targets
2025-12-17T15:15:07,818   copying build/lib/phaselab/targets/config.py -> build/bdist.linux-armv7l/wheel/./phaselab/targets
2025-12-17T15:15:07,820   copying build/lib/phaselab/targets/RAI1.yaml -> build/bdist.linux-armv7l/wheel/./phaselab/targets
2025-12-17T15:15:07,822   creating build/bdist.linux-armv7l/wheel/phaselab/io
2025-12-17T15:15:07,823   copying build/lib/phaselab/io/export.py -> build/bdist.linux-armv7l/wheel/./phaselab/io
2025-12-17T15:15:07,825   copying build/lib/phaselab/io/__init__.py -> build/bdist.linux-armv7l/wheel/./phaselab/io
2025-12-17T15:15:07,827   copying build/lib/phaselab/io/report.py -> build/bdist.linux-armv7l/wheel/./phaselab/io
2025-12-17T15:15:07,830   creating build/bdist.linux-armv7l/wheel/phaselab/core
2025-12-17T15:15:07,831   copying build/lib/phaselab/core/coherence.py -> build/bdist.linux-armv7l/wheel/./phaselab/core
2025-12-17T15:15:07,833   copying build/lib/phaselab/core/__init__.py -> build/bdist.linux-armv7l/wheel/./phaselab/core
2025-12-17T15:15:07,835   copying build/lib/phaselab/core/constants.py -> build/bdist.linux-armv7l/wheel/./phaselab/core
2025-12-17T15:15:07,837   copying build/lib/phaselab/core/hamiltonians.py -> build/bdist.linux-armv7l/wheel/./phaselab/core
2025-12-17T15:15:07,839   creating build/bdist.linux-armv7l/wheel/phaselab/fusion
2025-12-17T15:15:07,841   copying build/lib/phaselab/fusion/calibration.py -> build/bdist.linux-armv7l/wheel/./phaselab/fusion
2025-12-17T15:15:07,843   copying build/lib/phaselab/fusion/__init__.py -> build/bdist.linux-armv7l/wheel/./phaselab/fusion
2025-12-17T15:15:07,845   copying build/lib/phaselab/fusion/evidence.py -> build/bdist.linux-armv7l/wheel/./phaselab/fusion
2025-12-17T15:15:07,847   copying build/lib/phaselab/fusion/fuser.py -> build/bdist.linux-armv7l/wheel/./phaselab/fusion
2025-12-17T15:15:07,850   creating build/bdist.linux-armv7l/wheel/phaselab/therapy
2025-12-17T15:15:07,851   copying build/lib/phaselab/therapy/__init__.py -> build/bdist.linux-armv7l/wheel/./phaselab/therapy
2025-12-17T15:15:07,853   copying build/lib/phaselab/therapy/dosage.py -> build/bdist.linux-armv7l/wheel/./phaselab/therapy
2025-12-17T15:15:07,855   copying build/lib/phaselab/therapy/efficacy.py -> build/bdist.linux-armv7l/wheel/./phaselab/therapy
2025-12-17T15:15:07,858   creating build/bdist.linux-armv7l/wheel/phaselab/predictors
2025-12-17T15:15:07,859   copying build/lib/phaselab/predictors/adapters.py -> build/bdist.linux-armv7l/wheel/./phaselab/predictors
2025-12-17T15:15:07,861   copying build/lib/phaselab/predictors/protocol.py -> build/bdist.linux-armv7l/wheel/./phaselab/predictors
2025-12-17T15:15:07,864   copying build/lib/phaselab/predictors/__init__.py -> build/bdist.linux-armv7l/wheel/./phaselab/predictors
2025-12-17T15:15:07,867   copying build/lib/phaselab/predictors/stack.py -> build/bdist.linux-armv7l/wheel/./phaselab/predictors
2025-12-17T15:15:07,869   running install_egg_info
2025-12-17T15:15:07,875   Copying src/phaselab.egg-info to build/bdist.linux-armv7l/wheel/./phaselab-1.0.0-py3.11.egg-info
2025-12-17T15:15:07,888   running install_scripts
2025-12-17T15:15:07,899   creating build/bdist.linux-armv7l/wheel/phaselab-1.0.0.dist-info/WHEEL
2025-12-17T15:15:07,902   creating '/tmp/pip-wheel-ptdlaxva/.tmp-d4of6n1b/phaselab-1.0.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2025-12-17T15:15:07,904   adding 'phaselab/__init__.py'
2025-12-17T15:15:07,906   adding 'phaselab/chem/__init__.py'
2025-12-17T15:15:07,908   adding 'phaselab/chem/binding.py'
2025-12-17T15:15:07,911   adding 'phaselab/chem/reaction.py'
2025-12-17T15:15:07,913   adding 'phaselab/chem/screening.py'
2025-12-17T15:15:07,915   adding 'phaselab/chromatin/__init__.py'
2025-12-17T15:15:07,917   adding 'phaselab/chromatin/accessibility.py'
2025-12-17T15:15:07,920   adding 'phaselab/chromatin/atac_integration.py'
2025-12-17T15:15:07,922   adding 'phaselab/chromatin/integration.py'
2025-12-17T15:15:07,925   adding 'phaselab/chromatin/methylation.py'
2025-12-17T15:15:07,927   adding 'phaselab/chromatin/nucleosome.py'
2025-12-17T15:15:07,929   adding 'phaselab/chromatin/tissue_models.py'
2025-12-17T15:15:07,931   adding 'phaselab/circadian/__init__.py'
2025-12-17T15:15:07,932   adding 'phaselab/circadian/kuramoto.py'
2025-12-17T15:15:07,935   adding 'phaselab/circadian/multi_tissue.py'
2025-12-17T15:15:07,937   adding 'phaselab/circadian/sms_model.py'
2025-12-17T15:15:07,938   adding 'phaselab/context/__init__.py'
2025-12-17T15:15:07,940   adding 'phaselab/context/chromatin.py'
2025-12-17T15:15:07,942   adding 'phaselab/context/histone.py'
2025-12-17T15:15:07,944   adding 'phaselab/context/methylation.py'
2025-12-17T15:15:07,946   adding 'phaselab/context/stack.py'
2025-12-17T15:15:07,948   adding 'phaselab/core/__init__.py'
2025-12-17T15:15:07,949   adding 'phaselab/core/coherence.py'
2025-12-17T15:15:07,951   adding 'phaselab/core/constants.py'
2025-12-17T15:15:07,952   adding 'phaselab/core/hamiltonians.py'
2025-12-17T15:15:07,955   adding 'phaselab/crispr/__init__.py'
2025-12-17T15:15:07,957   adding 'phaselab/crispr/base_editing.py'
2025-12-17T15:15:07,960   adding 'phaselab/crispr/binding_landscape.py'
2025-12-17T15:15:07,962   adding 'phaselab/crispr/coherence_utils.py'
2025-12-17T15:15:07,965   adding 'phaselab/crispr/crispor_integration.py'
2025-12-17T15:15:07,967   adding 'phaselab/crispr/design.py'
2025-12-17T15:15:07,969   adding 'phaselab/crispr/editors.py'
2025-12-17T15:15:07,972   adding 'phaselab/crispr/enhanced_pipeline.py'
2025-12-17T15:15:07,975   adding 'phaselab/crispr/enhancer.py'
2025-12-17T15:15:07,978   adding 'phaselab/crispr/enumerate.py'
2025-12-17T15:15:07,981   adding 'phaselab/crispr/interference.py'
2025-12-17T15:15:07,983   adding 'phaselab/crispr/knockout.py'
2025-12-17T15:15:07,985   adding 'phaselab/crispr/multi_evidence.py'
2025-12-17T15:15:07,988   adding 'phaselab/crispr/multiguide.py'
2025-12-17T15:15:07,991   adding 'phaselab/crispr/offtarget_geometry.py'
2025-12-17T15:15:07,992   adding 'phaselab/crispr/pam_scan.py'
2025-12-17T15:15:07,994   adding 'phaselab/crispr/pipeline.py'
2025-12-17T15:15:07,997   adding 'phaselab/crispr/prime_editing.py'
2025-12-17T15:15:08,000   adding 'phaselab/crispr/quantum_discriminator.py'
2025-12-17T15:15:08,002   adding 'phaselab/crispr/region.py'
2025-12-17T15:15:08,008   adding 'phaselab/crispr/scoring.py'
2025-12-17T15:15:08,010   adding 'phaselab/crispr/transcriptional_phase.py'
2025-12-17T15:15:08,012   adding 'phaselab/delivery/__init__.py'
2025-12-17T15:15:08,015   adding 'phaselab/delivery/aav.py'
2025-12-17T15:15:08,017   adding 'phaselab/delivery/immunogenicity.py'
2025-12-17T15:15:08,019   adding 'phaselab/drug/__init__.py'
2025-12-17T15:15:08,021   adding 'phaselab/drug/chronotherapy.py'
2025-12-17T15:15:08,023   adding 'phaselab/drug/pharmacokinetics.py'
2025-12-17T15:15:08,025   adding 'phaselab/drug/variability.py'
2025-12-17T15:15:08,027   adding 'phaselab/fusion/__init__.py'
2025-12-17T15:15:08,029   adding 'phaselab/fusion/calibration.py'
2025-12-17T15:15:08,030   adding 'phaselab/fusion/evidence.py'
2025-12-17T15:15:08,034   adding 'phaselab/fusion/fuser.py'
2025-12-17T15:15:08,035   adding 'phaselab/integrations/__init__.py'
2025-12-17T15:15:08,037   adding 'phaselab/integrations/crispor/__init__.py'
2025-12-17T15:15:08,039   adding 'phaselab/integrations/crispor/client.py'
2025-12-17T15:15:08,042   adding 'phaselab/integrations/crispor/offtarget_ir.py'
2025-12-17T15:15:08,044   adding 'phaselab/integrations/crispor/parsers.py'
2025-12-17T15:15:08,047   adding 'phaselab/integrations/crispor/pipeline.py'
2025-12-17T15:15:08,049   adding 'phaselab/io/__init__.py'
2025-12-17T15:15:08,050   adding 'phaselab/io/export.py'
2025-12-17T15:15:08,052   adding 'phaselab/io/report.py'
2025-12-17T15:15:08,054   adding 'phaselab/landscapes/__init__.py'
2025-12-17T15:15:08,056   adding 'phaselab/landscapes/amplification.py'
2025-12-17T15:15:08,058   adding 'phaselab/landscapes/classification.py'
2025-12-17T15:15:08,060   adding 'phaselab/landscapes/coherence.py'
2025-12-17T15:15:08,062   adding 'phaselab/landscapes/core.py'
2025-12-17T15:15:08,064   adding 'phaselab/landscapes/io.py'
2025-12-17T15:15:08,066   adding 'phaselab/microbio/__init__.py'
2025-12-17T15:15:08,068   adding 'phaselab/microbio/crispri.py'
2025-12-17T15:15:08,070   adding 'phaselab/microbio/drug.py'
2025-12-17T15:15:08,072   adding 'phaselab/microbio/fitness.py'
2025-12-17T15:15:08,075   adding 'phaselab/microbio/tnseq.py'
2025-12-17T15:15:08,076   adding 'phaselab/omics/__init__.py'
2025-12-17T15:15:08,078   adding 'phaselab/omics/atac.py'
2025-12-17T15:15:08,080   adding 'phaselab/omics/chip.py'
2025-12-17T15:15:08,082   adding 'phaselab/omics/expression.py'
2025-12-17T15:15:08,084   adding 'phaselab/predictors/__init__.py'
2025-12-17T15:15:08,086   adding 'phaselab/predictors/adapters.py'
2025-12-17T15:15:08,088   adding 'phaselab/predictors/protocol.py'
2025-12-17T15:15:08,090   adding 'phaselab/predictors/stack.py'
2025-12-17T15:15:08,092   adding 'phaselab/protein/__init__.py'
2025-12-17T15:15:08,093   adding 'phaselab/protein/binding.py'
2025-12-17T15:15:08,095   adding 'phaselab/protein/dynamics.py'
2025-12-17T15:15:08,097   adding 'phaselab/protein/folding.py'
2025-12-17T15:15:08,099   adding 'phaselab/protein/mutscan.py'
2025-12-17T15:15:08,101   adding 'phaselab/quantum/__init__.py'
2025-12-17T15:15:08,103   adding 'phaselab/quantum/backend.py'
2025-12-17T15:15:08,104   adding 'phaselab/quantum/coherence.py'
2025-12-17T15:15:08,106   adding 'phaselab/quantum/config.py'
2025-12-17T15:15:08,108   adding 'phaselab/quantum/gpu.py'
2025-12-17T15:15:08,109   adding 'phaselab/quantum/grouping.py'
2025-12-17T15:15:08,111   adding 'phaselab/quantum/vqe.py'
2025-12-17T15:15:08,113   adding 'phaselab/spatial/__init__.py'
2025-12-17T15:15:08,115   adding 'phaselab/spatial/integration.py'
2025-12-17T15:15:08,118   adding 'phaselab/spatial/regulatory.py'
2025-12-17T15:15:08,120   adding 'phaselab/spatial/targeting.py'
2025-12-17T15:15:08,122   adding 'phaselab/spatial/validation.py'
2025-12-17T15:15:08,124   adding 'phaselab/surf/__init__.py'
2025-12-17T15:15:08,126   adding 'phaselab/surf/coherence.py'
2025-12-17T15:15:08,128   adding 'phaselab/surf/parser.py'
2025-12-17T15:15:08,130   adding 'phaselab/surf/pipeline.py'
2025-12-17T15:15:08,132   adding 'phaselab/surf/visualization.py'
2025-12-17T15:15:08,134   adding 'phaselab/targets/PTEN.yaml'
2025-12-17T15:15:08,135   adding 'phaselab/targets/RAI1.yaml'
2025-12-17T15:15:08,136   adding 'phaselab/targets/SCN2A.yaml'
2025-12-17T15:15:08,137   adding 'phaselab/targets/__init__.py'
2025-12-17T15:15:08,139   adding 'phaselab/targets/config.py'
2025-12-17T15:15:08,141   adding 'phaselab/therapy/__init__.py'
2025-12-17T15:15:08,143   adding 'phaselab/therapy/dosage.py'
2025-12-17T15:15:08,145   adding 'phaselab/therapy/efficacy.py'
2025-12-17T15:15:08,147   adding 'phaselab/trials/__init__.py'
2025-12-17T15:15:08,148   adding 'phaselab/trials/sms/__init__.py'
2025-12-17T15:15:08,150   adding 'phaselab/trials/sms/base_editing_trial.py'
2025-12-17T15:15:08,152   adding 'phaselab/trials/sms/circadian_simulation.py'
2025-12-17T15:15:08,154   adding 'phaselab/trials/sms/core.py'
2025-12-17T15:15:08,156   adding 'phaselab/trials/sms/crispra_trial.py'
2025-12-17T15:15:08,158   adding 'phaselab/trials/sms/crispri_trial.py'
2025-12-17T15:15:08,160   adding 'phaselab/trials/sms/delivery_assessment.py'
2025-12-17T15:15:08,161   adding 'phaselab/trials/sms/knockout_trial.py'
2025-12-17T15:15:08,164   adding 'phaselab/trials/sms/pipeline.py'
2025-12-17T15:15:08,166   adding 'phaselab/trials/sms/prime_editing_trial.py'
2025-12-17T15:15:08,169   adding 'phaselab-1.0.0.dist-info/licenses/LICENSE'
2025-12-17T15:15:08,171   adding 'phaselab-1.0.0.dist-info/METADATA'
2025-12-17T15:15:08,172   adding 'phaselab-1.0.0.dist-info/WHEEL'
2025-12-17T15:15:08,172   adding 'phaselab-1.0.0.dist-info/entry_points.txt'
2025-12-17T15:15:08,173   adding 'phaselab-1.0.0.dist-info/top_level.txt'
2025-12-17T15:15:08,175   adding 'phaselab-1.0.0.dist-info/RECORD'
2025-12-17T15:15:08,183   removing build/bdist.linux-armv7l/wheel
2025-12-17T15:15:08,317   Building wheel for phaselab (pyproject.toml): finished with status 'done'
2025-12-17T15:15:08,330   Created wheel for phaselab: filename=phaselab-1.0.0-py3-none-any.whl size=423414 sha256=8e2efe852e916b3f5fc0f997006ad5606113828664b870d93b17d65559282dea
2025-12-17T15:15:08,331   Stored in directory: /tmp/pip-ephem-wheel-cache-u_a9g8oa/wheels/99/62/31/1d5825d68ad64dac4f66ab8f9600a9d01b24b178f12e0924ea
2025-12-17T15:15:08,348 Successfully built phaselab
2025-12-17T15:15:08,369 Removed build tracker: '/tmp/pip-build-tracker-epf9oll9'