2025-12-18T23:48:03,491 Created temporary directory: /tmp/pip-ephem-wheel-cache-7tvn4vcj
2025-12-18T23:48:03,494 Created temporary directory: /tmp/pip-build-tracker-4i4ur01w
2025-12-18T23:48:03,495 Initialized build tracking at /tmp/pip-build-tracker-4i4ur01w
2025-12-18T23:48:03,495 Created build tracker: /tmp/pip-build-tracker-4i4ur01w
2025-12-18T23:48:03,496 Entered build tracker: /tmp/pip-build-tracker-4i4ur01w
2025-12-18T23:48:03,496 Created temporary directory: /tmp/pip-wheel-m_3bvuar
2025-12-18T23:48:03,499 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2025-12-18T23:48:03,501 Created temporary directory: /tmp/pip-ephem-wheel-cache-ap5zk1tb
2025-12-18T23:48:03,523 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2025-12-18T23:48:03,526 2 location(s) to search for versions of biocutils:
2025-12-18T23:48:03,526 * https://pypi.org/simple/biocutils/
2025-12-18T23:48:03,526 * https://www.piwheels.org/simple/biocutils/
2025-12-18T23:48:03,527 Fetching project page and analyzing links: https://pypi.org/simple/biocutils/
2025-12-18T23:48:03,528 Getting page https://pypi.org/simple/biocutils/
2025-12-18T23:48:03,529 Found index url https://pypi.org/simple
2025-12-18T23:48:03,743 Fetched page https://pypi.org/simple/biocutils/ as application/vnd.pypi.simple.v1+json
2025-12-18T23:48:03,750   Found link https://files.pythonhosted.org/packages/65/92/c409f2ae26598bcfc7b77e78fcf4224a50fc26c209f7b7311f8589b92f9c/biocutils-0.0.1.tar.gz (from https://pypi.org/simple/biocutils/), version: 0.0.1
2025-12-18T23:48:03,751   Found link https://files.pythonhosted.org/packages/b5/a0/29c24b56973501ca65d10dd6e17dfb13efb1d510e9fbbe920f6010058463/biocutils-0.0.2.tar.gz (from https://pypi.org/simple/biocutils/), version: 0.0.2
2025-12-18T23:48:03,752   Found link https://files.pythonhosted.org/packages/46/3a/5c48dbdf6e2a0d4fa049a0d1e8f97f33a38f11f8880c328e65273956df07/biocutils-0.0.3.tar.gz (from https://pypi.org/simple/biocutils/), version: 0.0.3
2025-12-18T23:48:03,752   Found link https://files.pythonhosted.org/packages/66/7f/e0f5c762a3a6960dc54ee89637389d7d6395dd18e7b9dcf4596bb0babec1/biocutils-0.0.4.tar.gz (from https://pypi.org/simple/biocutils/), version: 0.0.4
2025-12-18T23:48:03,753   Found link https://files.pythonhosted.org/packages/1c/b6/125205832da97a68904d82248e293cb1f0a9440cb78efeedf038ee822e9b/biocutils-0.0.5.tar.gz (from https://pypi.org/simple/biocutils/), version: 0.0.5
2025-12-18T23:48:03,754   Found link https://files.pythonhosted.org/packages/d6/de/49335b740de844993c6251dead61523f12ba5df37c95b6f1c5deea48cf98/biocutils-0.0.6.tar.gz (from https://pypi.org/simple/biocutils/), version: 0.0.6
2025-12-18T23:48:03,754   Found link https://files.pythonhosted.org/packages/73/ee/469b39221caf0f043478901805f4c5a206e6773c69dd976c7e3d6f98f207/biocutils-0.0.7.tar.gz (from https://pypi.org/simple/biocutils/), version: 0.0.7
2025-12-18T23:48:03,755   Skipping link: No binaries permitted for biocutils: https://files.pythonhosted.org/packages/e3/01/4b9e88a00cd8fa7bf310908febf68f0c00e09963de329be4cfc4d7167d40/biocutils-0.1.0-py3-none-any.whl (from https://pypi.org/simple/biocutils/) (requires-python:>=3.8)
2025-12-18T23:48:03,756   Found link https://files.pythonhosted.org/packages/b5/78/8c917210ac5d2b3909a6d6bc546bfe2350eeab43528fe8fb89665a41f7c8/biocutils-0.1.0.tar.gz (from https://pypi.org/simple/biocutils/) (requires-python:>=3.8), version: 0.1.0
2025-12-18T23:48:03,757   Skipping link: No binaries permitted for biocutils: https://files.pythonhosted.org/packages/15/05/f65279dcc93aa8648638fa536315670c68febbfc14dc999c5a72eeaab1b3/biocutils-0.1.1-py3-none-any.whl (from https://pypi.org/simple/biocutils/) (requires-python:>=3.8)
2025-12-18T23:48:03,758   Found link https://files.pythonhosted.org/packages/f3/69/f41cbf20f8851854010bffdf107b4014ac7a3996959880f573a9d2e6924f/biocutils-0.1.1.tar.gz (from https://pypi.org/simple/biocutils/) (requires-python:>=3.8), version: 0.1.1
2025-12-18T23:48:03,758   Skipping link: No binaries permitted for biocutils: https://files.pythonhosted.org/packages/1d/df/012402da66dcb5761aa8de40829aafbae60a6741d5bdb4dde1ed55f76a11/biocutils-0.1.2-py3-none-any.whl (from https://pypi.org/simple/biocutils/) (requires-python:>=3.8)
2025-12-18T23:48:03,759   Found link https://files.pythonhosted.org/packages/77/6b/a362d065d306ad6c54513a9f56fdd1b850361bcd5c25ee7c593624bc1c13/biocutils-0.1.2.tar.gz (from https://pypi.org/simple/biocutils/) (requires-python:>=3.8), version: 0.1.2
2025-12-18T23:48:03,760   Skipping link: No binaries permitted for biocutils: https://files.pythonhosted.org/packages/e9/8d/58e40042afbda2bd54e0e8721f8afa1be1d5373f468734dc282bc9e2c59f/biocutils-0.1.3-py3-none-any.whl (from https://pypi.org/simple/biocutils/) (requires-python:>=3.8)
2025-12-18T23:48:03,761   Found link https://files.pythonhosted.org/packages/e0/9b/5bbcd4c5b501fec2442093e5272107792e486796c555380050163924b876/biocutils-0.1.3.tar.gz (from https://pypi.org/simple/biocutils/) (requires-python:>=3.8), version: 0.1.3
2025-12-18T23:48:03,761   Skipping link: No binaries permitted for biocutils: https://files.pythonhosted.org/packages/07/ce/fbf0d8f1075e88bb9ae78eb1ad71c51a3bc5973925d904b118c14508ca69/biocutils-0.1.4-py3-none-any.whl (from https://pypi.org/simple/biocutils/) (requires-python:>=3.8)
2025-12-18T23:48:03,762   Found link https://files.pythonhosted.org/packages/6e/ad/9d39af1df08e21d76535f4b2d5987aae154cc2836c991ebce0862c28861c/biocutils-0.1.4.tar.gz (from https://pypi.org/simple/biocutils/) (requires-python:>=3.8), version: 0.1.4
2025-12-18T23:48:03,763   Skipping link: No binaries permitted for biocutils: https://files.pythonhosted.org/packages/e6/34/f0e8e18500b77895351d7e8d5c0632d80862cd8f236303222f6990856e47/biocutils-0.1.5-py3-none-any.whl (from https://pypi.org/simple/biocutils/) (requires-python:>=3.8)
2025-12-18T23:48:03,764   Found link https://files.pythonhosted.org/packages/4a/e1/91e24dfb0b4108753b08db95269737b0269f6716b2c5b3afd862bed4c54b/biocutils-0.1.5.tar.gz (from https://pypi.org/simple/biocutils/) (requires-python:>=3.8), version: 0.1.5
2025-12-18T23:48:03,764   Skipping link: No binaries permitted for biocutils: https://files.pythonhosted.org/packages/5c/64/1e544efee5bdb8ec8cacc51c05904e8c707ecec87d97206c7ed8a940ebba/biocutils-0.1.6-py3-none-any.whl (from https://pypi.org/simple/biocutils/) (requires-python:>=3.8)
2025-12-18T23:48:03,765   Found link https://files.pythonhosted.org/packages/86/8b/8e00e2ea4a2e25642e0d6105798a72bd9586d5a979ff38be00bf3fad8f0f/biocutils-0.1.6.tar.gz (from https://pypi.org/simple/biocutils/) (requires-python:>=3.8), version: 0.1.6
2025-12-18T23:48:03,766   Skipping link: No binaries permitted for biocutils: https://files.pythonhosted.org/packages/bc/ed/8c87ab2dcdb92518ca5bc2f281b5ff3dc25ec6719093a92b24eaa4e42981/biocutils-0.1.7-py3-none-any.whl (from https://pypi.org/simple/biocutils/) (requires-python:>=3.8)
2025-12-18T23:48:03,767   Found link https://files.pythonhosted.org/packages/ca/2b/ecbb0867f3d0c02c17f03f82d627c7fde159f335c01d1fd99fb092fda6c8/biocutils-0.1.7.tar.gz (from https://pypi.org/simple/biocutils/) (requires-python:>=3.8), version: 0.1.7
2025-12-18T23:48:03,768   Skipping link: No binaries permitted for biocutils: https://files.pythonhosted.org/packages/b2/67/1acd43fa2fae2a2845005deeef78c6a1ddcb72e3b71aa4f4a17275f7083c/biocutils-0.2.0-py3-none-any.whl (from https://pypi.org/simple/biocutils/) (requires-python:>=3.9)
2025-12-18T23:48:03,769   Found link https://files.pythonhosted.org/packages/e8/3e/54723a762363692e060e66972c7d4768dc9d0d1c335842ccb897e3b94de7/biocutils-0.2.0.tar.gz (from https://pypi.org/simple/biocutils/) (requires-python:>=3.9), version: 0.2.0
2025-12-18T23:48:03,769   Skipping link: No binaries permitted for biocutils: https://files.pythonhosted.org/packages/da/a8/06df99c38a6a9715f65f07d0803b67d63f9e49835cd16518bef31f6f9da9/biocutils-0.2.1-py3-none-any.whl (from https://pypi.org/simple/biocutils/) (requires-python:>=3.9)
2025-12-18T23:48:03,770   Found link https://files.pythonhosted.org/packages/ed/c8/7929e3ad5fb235021efdbb536fa721854ed9c154bfceaad8c018244e42f7/biocutils-0.2.1.tar.gz (from https://pypi.org/simple/biocutils/) (requires-python:>=3.9), version: 0.2.1
2025-12-18T23:48:03,771   Skipping link: No binaries permitted for biocutils: https://files.pythonhosted.org/packages/16/45/70ac20e09eaf043968fb92d0db3468ef29c593e83275418ea2905a9959dc/biocutils-0.2.2-py3-none-any.whl (from https://pypi.org/simple/biocutils/) (requires-python:>=3.9)
2025-12-18T23:48:03,772   Found link https://files.pythonhosted.org/packages/0c/e9/15a148fda2fddefb873a6c09ea484e206aeb59d71c0e661a377e12181f95/biocutils-0.2.2.tar.gz (from https://pypi.org/simple/biocutils/) (requires-python:>=3.9), version: 0.2.2
2025-12-18T23:48:03,772   Skipping link: No binaries permitted for biocutils: https://files.pythonhosted.org/packages/23/f7/a5e64053786509f7bc0b5b77fbb68709035c219f72e35e3103351a21ee60/biocutils-0.2.3-py3-none-any.whl (from https://pypi.org/simple/biocutils/) (requires-python:>=3.9)
2025-12-18T23:48:03,773   Found link https://files.pythonhosted.org/packages/59/cb/404e7da59034accc8ea57771e73d471c5f291d2e2e74e13201f1b3d5d398/biocutils-0.2.3.tar.gz (from https://pypi.org/simple/biocutils/) (requires-python:>=3.9), version: 0.2.3
2025-12-18T23:48:03,774   Skipping link: No binaries permitted for biocutils: https://files.pythonhosted.org/packages/cf/c9/3a1985ee38cc4f05404f67150f713824ed9ea2ae44ac32b020ffee120064/biocutils-0.3.0-py3-none-any.whl (from https://pypi.org/simple/biocutils/) (requires-python:>=3.9)
2025-12-18T23:48:03,775   Found link https://files.pythonhosted.org/packages/6c/f7/b9e4cbdcf1223c36329f4c698b9057998acba8cc94a32ce9bb8993eb36fa/biocutils-0.3.0.tar.gz (from https://pypi.org/simple/biocutils/) (requires-python:>=3.9), version: 0.3.0
2025-12-18T23:48:03,775   Skipping link: No binaries permitted for biocutils: https://files.pythonhosted.org/packages/71/f2/d59c6a769f851b84bebd7f51881d09b5b2ad6fc82f0efe8c7b4c71bf91ca/biocutils-0.3.2.dev1-py3-none-any.whl (from https://pypi.org/simple/biocutils/) (requires-python:>=3.9)
2025-12-18T23:48:03,776   Found link https://files.pythonhosted.org/packages/d8/36/e89155ff064d8612214f66d0519fdd0348f4f0db3454854240c29cc7f03a/biocutils-0.3.2.dev1.tar.gz (from https://pypi.org/simple/biocutils/) (requires-python:>=3.9), version: 0.3.2.dev1
2025-12-18T23:48:03,777 Fetching project page and analyzing links: https://www.piwheels.org/simple/biocutils/
2025-12-18T23:48:03,777 Getting page https://www.piwheels.org/simple/biocutils/
2025-12-18T23:48:03,779 Found index url https://www.piwheels.org/simple
2025-12-18T23:48:03,953 Fetched page https://www.piwheels.org/simple/biocutils/ as text/html
2025-12-18T23:48:03,962   Skipping link: No binaries permitted for biocutils: https://archive1.piwheels.org/simple/biocutils/biocutils-0.2.3-py3-none-any.whl#sha256=fd61c5324e4bf51b8a30e68430de9bd1fbc337b1a96a5151577f70b9853e0456 (from https://www.piwheels.org/simple/biocutils/) (requires-python:>=3.9)
2025-12-18T23:48:03,963   Skipping link: No binaries permitted for biocutils: https://archive1.piwheels.org/simple/biocutils/biocutils-0.2.2-py3-none-any.whl#sha256=92e839bdc8a6fa1f14ddc2ef5fb1299d14174f1c746a8cd460530af6311562bd (from https://www.piwheels.org/simple/biocutils/) (requires-python:>=3.9)
2025-12-18T23:48:03,964   Skipping link: No binaries permitted for biocutils: https://archive1.piwheels.org/simple/biocutils/biocutils-0.2.1-py3-none-any.whl#sha256=5e7922524f562543134c0561b5d8e0a27073b320121ae726b86b94b9338fd32f (from https://www.piwheels.org/simple/biocutils/) (requires-python:>=3.9)
2025-12-18T23:48:03,964   Skipping link: No binaries permitted for biocutils: https://archive1.piwheels.org/simple/biocutils/biocutils-0.2.0-py3-none-any.whl#sha256=e74dda4432c92dea7c36152890bdca06090777e294922c3a4ed8efe23444f9dd (from https://www.piwheels.org/simple/biocutils/) (requires-python:>=3.9)
2025-12-18T23:48:03,965   Skipping link: No binaries permitted for biocutils: https://archive1.piwheels.org/simple/biocutils/biocutils-0.1.7-py3-none-any.whl#sha256=800b9a5433c9fa102c2c89c4502e7c242928bebb98a304f648c4ba9fa0ac4a20 (from https://www.piwheels.org/simple/biocutils/) (requires-python:>=3.8)
2025-12-18T23:48:03,966   Skipping link: No binaries permitted for biocutils: https://archive1.piwheels.org/simple/biocutils/biocutils-0.1.6-py3-none-any.whl#sha256=355832c5064d8081a2ae7ae9d3d57cabbb0c2d30f7f803f3793e2b6a66ca1a8b (from https://www.piwheels.org/simple/biocutils/) (requires-python:>=3.8)
2025-12-18T23:48:03,967   Skipping link: No binaries permitted for biocutils: https://archive1.piwheels.org/simple/biocutils/biocutils-0.1.5-py3-none-any.whl#sha256=673e16232fe3901865a9c56f4833255ebf205c87de5de826758aaf36c8e2967b (from https://www.piwheels.org/simple/biocutils/) (requires-python:>=3.8)
2025-12-18T23:48:03,967   Skipping link: No binaries permitted for biocutils: https://archive1.piwheels.org/simple/biocutils/biocutils-0.1.4-py3-none-any.whl#sha256=ace4bbf4b8a54557ed131ea61b55b071522cd87ec2e1b697bfc960dcf5b2e94e (from https://www.piwheels.org/simple/biocutils/) (requires-python:>=3.8)
2025-12-18T23:48:03,968   Skipping link: No binaries permitted for biocutils: https://archive1.piwheels.org/simple/biocutils/biocutils-0.1.3-py3-none-any.whl#sha256=9ab54dd911cd1b899fcd72efb23e2e8cf89c479b3badbdc4e70e06c6a72d884d (from https://www.piwheels.org/simple/biocutils/) (requires-python:>=3.8)
2025-12-18T23:48:03,969   Skipping link: No binaries permitted for biocutils: https://archive1.piwheels.org/simple/biocutils/biocutils-0.1.2-py3-none-any.whl#sha256=330553ba98c11d889d3e38669ea105a54bb2cb5f366229e5551adbd4851ae386 (from https://www.piwheels.org/simple/biocutils/) (requires-python:>=3.8)
2025-12-18T23:48:03,969   Skipping link: No binaries permitted for biocutils: https://archive1.piwheels.org/simple/biocutils/biocutils-0.1.1-py3-none-any.whl#sha256=e34542aaa8fe59518b1e4d9e4e4817d90dae04b7a5b4fae116c3ff29abbddd1d (from https://www.piwheels.org/simple/biocutils/) (requires-python:>=3.8)
2025-12-18T23:48:03,970   Skipping link: No binaries permitted for biocutils: https://archive1.piwheels.org/simple/biocutils/biocutils-0.1.0-py3-none-any.whl#sha256=f95b610d20534b2c8fa73233e65147f29c41f2ce695a6dde3a6fa0f8235511f5 (from https://www.piwheels.org/simple/biocutils/) (requires-python:>=3.8)
2025-12-18T23:48:03,970   Skipping link: No binaries permitted for biocutils: https://archive1.piwheels.org/simple/biocutils/biocutils-0.0.7-py3-none-any.whl#sha256=a443ab0c991aebd5249c0ac238f5c08436cec95c9f60023721e9c64d7f2e0dc3 (from https://www.piwheels.org/simple/biocutils/)
2025-12-18T23:48:03,971   Skipping link: No binaries permitted for biocutils: https://archive1.piwheels.org/simple/biocutils/biocutils-0.0.6-py3-none-any.whl#sha256=acc67f8b6d674fc917b3b659f767c6a6c2bfd61d79cac9ca9bf40bbe9d82e05f (from https://www.piwheels.org/simple/biocutils/)
2025-12-18T23:48:03,972   Skipping link: No binaries permitted for biocutils: https://archive1.piwheels.org/simple/biocutils/biocutils-0.0.5-py3-none-any.whl#sha256=0c4c52db0fdfbd7afa0c77ae6eb1eefc30d09228b2d57bb1b94a93c496b09f61 (from https://www.piwheels.org/simple/biocutils/)
2025-12-18T23:48:03,973   Skipping link: No binaries permitted for biocutils: https://archive1.piwheels.org/simple/biocutils/biocutils-0.0.4-py3-none-any.whl#sha256=150341828dba726d243d2d7e2f667339bd79aad4d739e57fd0bfc075952fb424 (from https://www.piwheels.org/simple/biocutils/)
2025-12-18T23:48:03,974   Skipping link: No binaries permitted for biocutils: https://archive1.piwheels.org/simple/biocutils/biocutils-0.0.3-py3-none-any.whl#sha256=0be924d197b4e8bea234f3c671bc1052b3301537cd48b3b3e47e6995c7c36a19 (from https://www.piwheels.org/simple/biocutils/)
2025-12-18T23:48:03,974   Skipping link: No binaries permitted for biocutils: https://archive1.piwheels.org/simple/biocutils/biocutils-0.0.2-py3-none-any.whl#sha256=7d22a0f780a38f49955bb884da3b497013be3a71854d1dfdb886c12a8a9dd297 (from https://www.piwheels.org/simple/biocutils/)
2025-12-18T23:48:03,975   Skipping link: No binaries permitted for biocutils: https://archive1.piwheels.org/simple/biocutils/biocutils-0.0.1-py3-none-any.whl#sha256=cc3cc12cf8b4082333fbb52b468fe7fe9b5c87bc34cd2d46a9e99219e3acf9b5 (from https://www.piwheels.org/simple/biocutils/)
2025-12-18T23:48:03,976 Skipping link: not a file: https://www.piwheels.org/simple/biocutils/
2025-12-18T23:48:03,976 Skipping link: not a file: https://pypi.org/simple/biocutils/
2025-12-18T23:48:03,998 Given no hashes to check 1 links for project 'biocutils': discarding no candidates
2025-12-18T23:48:04,015 Collecting biocutils==0.3.0
2025-12-18T23:48:04,018   Created temporary directory: /tmp/pip-unpack-dqft7x99
2025-12-18T23:48:04,238   Downloading biocutils-0.3.0.tar.gz (62 kB)
2025-12-18T23:48:04,491   Added biocutils==0.3.0 from https://files.pythonhosted.org/packages/6c/f7/b9e4cbdcf1223c36329f4c698b9057998acba8cc94a32ce9bb8993eb36fa/biocutils-0.3.0.tar.gz to build tracker '/tmp/pip-build-tracker-4i4ur01w'
2025-12-18T23:48:04,497   Created temporary directory: /tmp/pip-build-env-3n56_y4x
2025-12-18T23:48:04,501   Installing build dependencies: started
2025-12-18T23:48:04,502   Running command pip subprocess to install build dependencies
2025-12-18T23:48:05,664   Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11)
2025-12-18T23:48:06,290   DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2025-12-18T23:48:06,313   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2025-12-18T23:48:08,055   Collecting setuptools>=46.1.0
2025-12-18T23:48:08,144     Using cached https://www.piwheels.org/simple/setuptools/setuptools-80.9.0-py3-none-any.whl (1.2 MB)
2025-12-18T23:48:08,531   Collecting setuptools_scm[toml]>=5
2025-12-18T23:48:08,548     Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-9.2.2-py3-none-any.whl (62 kB)
2025-12-18T23:48:08,732   Collecting packaging>=20
2025-12-18T23:48:08,747     Using cached https://www.piwheels.org/simple/packaging/packaging-25.0-py3-none-any.whl (66 kB)
2025-12-18T23:48:11,686   Installing collected packages: setuptools, packaging, setuptools_scm
2025-12-18T23:48:15,727     Creating /tmp/pip-build-env-3n56_y4x/overlay/local/bin
2025-12-18T23:48:15,730     changing mode of /tmp/pip-build-env-3n56_y4x/overlay/local/bin/setuptools-scm to 755
2025-12-18T23:48:15,752   Successfully installed packaging-25.0 setuptools-80.9.0 setuptools_scm-9.2.2
2025-12-18T23:48:16,034   Installing build dependencies: finished with status 'done'
2025-12-18T23:48:16,040   Getting requirements to build wheel: started
2025-12-18T23:48:16,042   Running command Getting requirements to build wheel
2025-12-18T23:48:16,757   running egg_info
2025-12-18T23:48:16,766   writing src/biocutils.egg-info/PKG-INFO
2025-12-18T23:48:16,771   writing dependency_links to src/biocutils.egg-info/dependency_links.txt
2025-12-18T23:48:16,775   writing requirements to src/biocutils.egg-info/requires.txt
2025-12-18T23:48:16,776   writing top-level names to src/biocutils.egg-info/top_level.txt
2025-12-18T23:48:16,838   listing git files failed - pretending there aren't any
2025-12-18T23:48:16,844   reading manifest file 'src/biocutils.egg-info/SOURCES.txt'
2025-12-18T23:48:16,853   adding license file 'LICENSE.txt'
2025-12-18T23:48:16,859   writing manifest file 'src/biocutils.egg-info/SOURCES.txt'
2025-12-18T23:48:16,952   Getting requirements to build wheel: finished with status 'done'
2025-12-18T23:48:16,956   Created temporary directory: /tmp/pip-modern-metadata-f61_qc0w
2025-12-18T23:48:16,958   Preparing metadata (pyproject.toml): started
2025-12-18T23:48:16,960   Running command Preparing metadata (pyproject.toml)
2025-12-18T23:48:17,615   running dist_info
2025-12-18T23:48:17,630   creating /tmp/pip-modern-metadata-f61_qc0w/biocutils.egg-info
2025-12-18T23:48:17,631   writing /tmp/pip-modern-metadata-f61_qc0w/biocutils.egg-info/PKG-INFO
2025-12-18T23:48:17,637   writing dependency_links to /tmp/pip-modern-metadata-f61_qc0w/biocutils.egg-info/dependency_links.txt
2025-12-18T23:48:17,640   writing requirements to /tmp/pip-modern-metadata-f61_qc0w/biocutils.egg-info/requires.txt
2025-12-18T23:48:17,641   writing top-level names to /tmp/pip-modern-metadata-f61_qc0w/biocutils.egg-info/top_level.txt
2025-12-18T23:48:17,642   writing manifest file '/tmp/pip-modern-metadata-f61_qc0w/biocutils.egg-info/SOURCES.txt'
2025-12-18T23:48:17,701   listing git files failed - pretending there aren't any
2025-12-18T23:48:17,706   reading manifest file '/tmp/pip-modern-metadata-f61_qc0w/biocutils.egg-info/SOURCES.txt'
2025-12-18T23:48:17,708   adding license file 'LICENSE.txt'
2025-12-18T23:48:17,713   writing manifest file '/tmp/pip-modern-metadata-f61_qc0w/biocutils.egg-info/SOURCES.txt'
2025-12-18T23:48:17,714   creating '/tmp/pip-modern-metadata-f61_qc0w/biocutils-0.3.0.dist-info'
2025-12-18T23:48:17,855   Preparing metadata (pyproject.toml): finished with status 'done'
2025-12-18T23:48:17,860   Source in /tmp/pip-wheel-m_3bvuar/biocutils_60fff64692cd47318960c8230c43572a has version 0.3.0, which satisfies requirement biocutils==0.3.0 from https://files.pythonhosted.org/packages/6c/f7/b9e4cbdcf1223c36329f4c698b9057998acba8cc94a32ce9bb8993eb36fa/biocutils-0.3.0.tar.gz
2025-12-18T23:48:17,861   Removed biocutils==0.3.0 from https://files.pythonhosted.org/packages/6c/f7/b9e4cbdcf1223c36329f4c698b9057998acba8cc94a32ce9bb8993eb36fa/biocutils-0.3.0.tar.gz from build tracker '/tmp/pip-build-tracker-4i4ur01w'
2025-12-18T23:48:17,866 Created temporary directory: /tmp/pip-unpack-50k9gt56
2025-12-18T23:48:17,867 Building wheels for collected packages: biocutils
2025-12-18T23:48:17,872   Created temporary directory: /tmp/pip-wheel-njpfysm_
2025-12-18T23:48:17,872   Destination directory: /tmp/pip-wheel-njpfysm_
2025-12-18T23:48:17,874   Building wheel for biocutils (pyproject.toml): started
2025-12-18T23:48:17,875   Running command Building wheel for biocutils (pyproject.toml)
2025-12-18T23:48:18,524   running bdist_wheel
2025-12-18T23:48:18,560   running build
2025-12-18T23:48:18,561   running build_py
2025-12-18T23:48:18,573   creating build/lib/biocutils
2025-12-18T23:48:18,575   copying src/biocutils/factorize.py -> build/lib/biocutils
2025-12-18T23:48:18,578   copying src/biocutils/combine_columns.py -> build/lib/biocutils
2025-12-18T23:48:18,580   copying src/biocutils/Names.py -> build/lib/biocutils
2025-12-18T23:48:18,582   copying src/biocutils/package_utils.py -> build/lib/biocutils
2025-12-18T23:48:18,584   copying src/biocutils/FloatList.py -> build/lib/biocutils
2025-12-18T23:48:18,586   copying src/biocutils/print_wrapped_table.py -> build/lib/biocutils
2025-12-18T23:48:18,589   copying src/biocutils/BooleanList.py -> build/lib/biocutils
2025-12-18T23:48:18,591   copying src/biocutils/subset_rows.py -> build/lib/biocutils
2025-12-18T23:48:18,593   copying src/biocutils/which.py -> build/lib/biocutils
2025-12-18T23:48:18,595   copying src/biocutils/extract_row_names.py -> build/lib/biocutils
2025-12-18T23:48:18,597   copying src/biocutils/combine.py -> build/lib/biocutils
2025-12-18T23:48:18,599   copying src/biocutils/is_high_dimensional.py -> build/lib/biocutils
2025-12-18T23:48:18,601   copying src/biocutils/relaxed_combine_rows.py -> build/lib/biocutils
2025-12-18T23:48:18,603   copying src/biocutils/subset_sequence.py -> build/lib/biocutils
2025-12-18T23:48:18,605   copying src/biocutils/Factor.py -> build/lib/biocutils
2025-12-18T23:48:18,608   copying src/biocutils/get_height.py -> build/lib/biocutils
2025-12-18T23:48:18,610   copying src/biocutils/__init__.py -> build/lib/biocutils
2025-12-18T23:48:18,612   copying src/biocutils/is_list_of_type.py -> build/lib/biocutils
2025-12-18T23:48:18,614   copying src/biocutils/show_as_cell.py -> build/lib/biocutils
2025-12-18T23:48:18,616   copying src/biocutils/IntegerList.py -> build/lib/biocutils
2025-12-18T23:48:18,618   copying src/biocutils/subset.py -> build/lib/biocutils
2025-12-18T23:48:18,620   copying src/biocutils/print_truncated.py -> build/lib/biocutils
2025-12-18T23:48:18,622   copying src/biocutils/bioc_object.py -> build/lib/biocutils
2025-12-18T23:48:18,624   copying src/biocutils/assign_rows.py -> build/lib/biocutils
2025-12-18T23:48:18,626   copying src/biocutils/StringList.py -> build/lib/biocutils
2025-12-18T23:48:18,628   copying src/biocutils/combine_sequences.py -> build/lib/biocutils
2025-12-18T23:48:18,630   copying src/biocutils/is_missing_scalar.py -> build/lib/biocutils
2025-12-18T23:48:18,632   copying src/biocutils/NamedList.py -> build/lib/biocutils
2025-12-18T23:48:18,634   copying src/biocutils/assign.py -> build/lib/biocutils
2025-12-18T23:48:18,636   copying src/biocutils/intersect.py -> build/lib/biocutils
2025-12-18T23:48:18,638   copying src/biocutils/_utils_combine.py -> build/lib/biocutils
2025-12-18T23:48:18,641   copying src/biocutils/combine_rows.py -> build/lib/biocutils
2025-12-18T23:48:18,642   copying src/biocutils/map_to_index.py -> build/lib/biocutils
2025-12-18T23:48:18,644   copying src/biocutils/match.py -> build/lib/biocutils
2025-12-18T23:48:18,646   copying src/biocutils/extract_column_names.py -> build/lib/biocutils
2025-12-18T23:48:18,648   copying src/biocutils/convert_to_dense.py -> build/lib/biocutils
2025-12-18T23:48:18,650   copying src/biocutils/assign_sequence.py -> build/lib/biocutils
2025-12-18T23:48:18,652   copying src/biocutils/normalize_subscript.py -> build/lib/biocutils
2025-12-18T23:48:18,654   copying src/biocutils/relaxed_combine_columns.py -> build/lib/biocutils
2025-12-18T23:48:18,656   copying src/biocutils/reverse_index.py -> build/lib/biocutils
2025-12-18T23:48:18,658   copying src/biocutils/union.py -> build/lib/biocutils
2025-12-18T23:48:18,659   running egg_info
2025-12-18T23:48:18,674   writing src/biocutils.egg-info/PKG-INFO
2025-12-18T23:48:18,678   writing dependency_links to src/biocutils.egg-info/dependency_links.txt
2025-12-18T23:48:18,681   writing requirements to src/biocutils.egg-info/requires.txt
2025-12-18T23:48:18,682   writing top-level names to src/biocutils.egg-info/top_level.txt
2025-12-18T23:48:18,722   listing git files failed - pretending there aren't any
2025-12-18T23:48:18,726   reading manifest file 'src/biocutils.egg-info/SOURCES.txt'
2025-12-18T23:48:18,733   adding license file 'LICENSE.txt'
2025-12-18T23:48:18,739   writing manifest file 'src/biocutils.egg-info/SOURCES.txt'
2025-12-18T23:48:18,762   installing to build/bdist.linux-armv7l/wheel
2025-12-18T23:48:18,763   running install
2025-12-18T23:48:18,785   running install_lib
2025-12-18T23:48:18,795   creating build/bdist.linux-armv7l/wheel
2025-12-18T23:48:18,798   creating build/bdist.linux-armv7l/wheel/biocutils
2025-12-18T23:48:18,799   copying build/lib/biocutils/factorize.py -> build/bdist.linux-armv7l/wheel/./biocutils
2025-12-18T23:48:18,802   copying build/lib/biocutils/combine_columns.py -> build/bdist.linux-armv7l/wheel/./biocutils
2025-12-18T23:48:18,804   copying build/lib/biocutils/Names.py -> build/bdist.linux-armv7l/wheel/./biocutils
2025-12-18T23:48:18,807   copying build/lib/biocutils/package_utils.py -> build/bdist.linux-armv7l/wheel/./biocutils
2025-12-18T23:48:18,809   copying build/lib/biocutils/FloatList.py -> build/bdist.linux-armv7l/wheel/./biocutils
2025-12-18T23:48:18,811   copying build/lib/biocutils/print_wrapped_table.py -> build/bdist.linux-armv7l/wheel/./biocutils
2025-12-18T23:48:18,813   copying build/lib/biocutils/BooleanList.py -> build/bdist.linux-armv7l/wheel/./biocutils
2025-12-18T23:48:18,815   copying build/lib/biocutils/subset_rows.py -> build/bdist.linux-armv7l/wheel/./biocutils
2025-12-18T23:48:18,817   copying build/lib/biocutils/which.py -> build/bdist.linux-armv7l/wheel/./biocutils
2025-12-18T23:48:18,819   copying build/lib/biocutils/extract_row_names.py -> build/bdist.linux-armv7l/wheel/./biocutils
2025-12-18T23:48:18,821   copying build/lib/biocutils/combine.py -> build/bdist.linux-armv7l/wheel/./biocutils
2025-12-18T23:48:18,823   copying build/lib/biocutils/is_high_dimensional.py -> build/bdist.linux-armv7l/wheel/./biocutils
2025-12-18T23:48:18,825   copying build/lib/biocutils/relaxed_combine_rows.py -> build/bdist.linux-armv7l/wheel/./biocutils
2025-12-18T23:48:18,827   copying build/lib/biocutils/subset_sequence.py -> build/bdist.linux-armv7l/wheel/./biocutils
2025-12-18T23:48:18,829   copying build/lib/biocutils/Factor.py -> build/bdist.linux-armv7l/wheel/./biocutils
2025-12-18T23:48:18,832   copying build/lib/biocutils/get_height.py -> build/bdist.linux-armv7l/wheel/./biocutils
2025-12-18T23:48:18,834   copying build/lib/biocutils/__init__.py -> build/bdist.linux-armv7l/wheel/./biocutils
2025-12-18T23:48:18,836   copying build/lib/biocutils/is_list_of_type.py -> build/bdist.linux-armv7l/wheel/./biocutils
2025-12-18T23:48:18,838   copying build/lib/biocutils/show_as_cell.py -> build/bdist.linux-armv7l/wheel/./biocutils
2025-12-18T23:48:18,840   copying build/lib/biocutils/IntegerList.py -> build/bdist.linux-armv7l/wheel/./biocutils
2025-12-18T23:48:18,842   copying build/lib/biocutils/subset.py -> build/bdist.linux-armv7l/wheel/./biocutils
2025-12-18T23:48:18,844   copying build/lib/biocutils/print_truncated.py -> build/bdist.linux-armv7l/wheel/./biocutils
2025-12-18T23:48:18,846   copying build/lib/biocutils/bioc_object.py -> build/bdist.linux-armv7l/wheel/./biocutils
2025-12-18T23:48:18,848   copying build/lib/biocutils/assign_rows.py -> build/bdist.linux-armv7l/wheel/./biocutils
2025-12-18T23:48:18,850   copying build/lib/biocutils/StringList.py -> build/bdist.linux-armv7l/wheel/./biocutils
2025-12-18T23:48:18,852   copying build/lib/biocutils/combine_sequences.py -> build/bdist.linux-armv7l/wheel/./biocutils
2025-12-18T23:48:18,854   copying build/lib/biocutils/is_missing_scalar.py -> build/bdist.linux-armv7l/wheel/./biocutils
2025-12-18T23:48:18,856   copying build/lib/biocutils/NamedList.py -> build/bdist.linux-armv7l/wheel/./biocutils
2025-12-18T23:48:18,858   copying build/lib/biocutils/assign.py -> build/bdist.linux-armv7l/wheel/./biocutils
2025-12-18T23:48:18,860   copying build/lib/biocutils/intersect.py -> build/bdist.linux-armv7l/wheel/./biocutils
2025-12-18T23:48:18,862   copying build/lib/biocutils/_utils_combine.py -> build/bdist.linux-armv7l/wheel/./biocutils
2025-12-18T23:48:18,865   copying build/lib/biocutils/combine_rows.py -> build/bdist.linux-armv7l/wheel/./biocutils
2025-12-18T23:48:18,867   copying build/lib/biocutils/map_to_index.py -> build/bdist.linux-armv7l/wheel/./biocutils
2025-12-18T23:48:18,870   copying build/lib/biocutils/match.py -> build/bdist.linux-armv7l/wheel/./biocutils
2025-12-18T23:48:18,873   copying build/lib/biocutils/extract_column_names.py -> build/bdist.linux-armv7l/wheel/./biocutils
2025-12-18T23:48:18,875   copying build/lib/biocutils/convert_to_dense.py -> build/bdist.linux-armv7l/wheel/./biocutils
2025-12-18T23:48:18,878   copying build/lib/biocutils/assign_sequence.py -> build/bdist.linux-armv7l/wheel/./biocutils
2025-12-18T23:48:18,881   copying build/lib/biocutils/normalize_subscript.py -> build/bdist.linux-armv7l/wheel/./biocutils
2025-12-18T23:48:18,884   copying build/lib/biocutils/relaxed_combine_columns.py -> build/bdist.linux-armv7l/wheel/./biocutils
2025-12-18T23:48:18,886   copying build/lib/biocutils/reverse_index.py -> build/bdist.linux-armv7l/wheel/./biocutils
2025-12-18T23:48:18,889   copying build/lib/biocutils/union.py -> build/bdist.linux-armv7l/wheel/./biocutils
2025-12-18T23:48:18,892   running install_egg_info
2025-12-18T23:48:18,904   Copying src/biocutils.egg-info to build/bdist.linux-armv7l/wheel/./biocutils-0.3.0-py3.11.egg-info
2025-12-18T23:48:18,922   running install_scripts
2025-12-18T23:48:18,935   creating build/bdist.linux-armv7l/wheel/biocutils-0.3.0.dist-info/WHEEL
2025-12-18T23:48:18,938   creating '/tmp/pip-wheel-njpfysm_/.tmp-3ho7l4z_/biocutils-0.3.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2025-12-18T23:48:18,941   adding 'biocutils/BooleanList.py'
2025-12-18T23:48:18,945   adding 'biocutils/Factor.py'
2025-12-18T23:48:18,947   adding 'biocutils/FloatList.py'
2025-12-18T23:48:18,948   adding 'biocutils/IntegerList.py'
2025-12-18T23:48:18,950   adding 'biocutils/NamedList.py'
2025-12-18T23:48:18,952   adding 'biocutils/Names.py'
2025-12-18T23:48:18,954   adding 'biocutils/StringList.py'
2025-12-18T23:48:18,955   adding 'biocutils/__init__.py'
2025-12-18T23:48:18,957   adding 'biocutils/_utils_combine.py'
2025-12-18T23:48:18,958   adding 'biocutils/assign.py'
2025-12-18T23:48:18,959   adding 'biocutils/assign_rows.py'
2025-12-18T23:48:18,960   adding 'biocutils/assign_sequence.py'
2025-12-18T23:48:18,962   adding 'biocutils/bioc_object.py'
2025-12-18T23:48:18,963   adding 'biocutils/combine.py'
2025-12-18T23:48:18,964   adding 'biocutils/combine_columns.py'
2025-12-18T23:48:18,966   adding 'biocutils/combine_rows.py'
2025-12-18T23:48:18,967   adding 'biocutils/combine_sequences.py'
2025-12-18T23:48:18,968   adding 'biocutils/convert_to_dense.py'
2025-12-18T23:48:18,969   adding 'biocutils/extract_column_names.py'
2025-12-18T23:48:18,971   adding 'biocutils/extract_row_names.py'
2025-12-18T23:48:18,972   adding 'biocutils/factorize.py'
2025-12-18T23:48:18,973   adding 'biocutils/get_height.py'
2025-12-18T23:48:18,975   adding 'biocutils/intersect.py'
2025-12-18T23:48:18,976   adding 'biocutils/is_high_dimensional.py'
2025-12-18T23:48:18,977   adding 'biocutils/is_list_of_type.py'
2025-12-18T23:48:18,978   adding 'biocutils/is_missing_scalar.py'
2025-12-18T23:48:18,979   adding 'biocutils/map_to_index.py'
2025-12-18T23:48:18,980   adding 'biocutils/match.py'
2025-12-18T23:48:18,982   adding 'biocutils/normalize_subscript.py'
2025-12-18T23:48:18,983   adding 'biocutils/package_utils.py'
2025-12-18T23:48:18,985   adding 'biocutils/print_truncated.py'
2025-12-18T23:48:18,986   adding 'biocutils/print_wrapped_table.py'
2025-12-18T23:48:18,987   adding 'biocutils/relaxed_combine_columns.py'
2025-12-18T23:48:18,989   adding 'biocutils/relaxed_combine_rows.py'
2025-12-18T23:48:18,990   adding 'biocutils/reverse_index.py'
2025-12-18T23:48:18,991   adding 'biocutils/show_as_cell.py'
2025-12-18T23:48:18,993   adding 'biocutils/subset.py'
2025-12-18T23:48:18,994   adding 'biocutils/subset_rows.py'
2025-12-18T23:48:18,995   adding 'biocutils/subset_sequence.py'
2025-12-18T23:48:18,996   adding 'biocutils/union.py'
2025-12-18T23:48:18,997   adding 'biocutils/which.py'
2025-12-18T23:48:19,001   adding 'biocutils-0.3.0.dist-info/licenses/LICENSE.txt'
2025-12-18T23:48:19,002   adding 'biocutils-0.3.0.dist-info/METADATA'
2025-12-18T23:48:19,003   adding 'biocutils-0.3.0.dist-info/WHEEL'
2025-12-18T23:48:19,004   adding 'biocutils-0.3.0.dist-info/top_level.txt'
2025-12-18T23:48:19,005   adding 'biocutils-0.3.0.dist-info/RECORD'
2025-12-18T23:48:19,007   removing build/bdist.linux-armv7l/wheel
2025-12-18T23:48:19,118   Building wheel for biocutils (pyproject.toml): finished with status 'done'
2025-12-18T23:48:19,123   Created wheel for biocutils: filename=biocutils-0.3.0-py3-none-any.whl size=48732 sha256=d05729cdab04a59a14cfd89e1170d1e4d0143fc012c750b80a358af9d56f62cd
2025-12-18T23:48:19,124   Stored in directory: /tmp/pip-ephem-wheel-cache-ap5zk1tb/wheels/a5/82/3c/5a0d3626d0a237b9886b4abe6ff34dc36ee5f912208963d261
2025-12-18T23:48:19,136 Successfully built biocutils
2025-12-18T23:48:19,140 Removed build tracker: '/tmp/pip-build-tracker-4i4ur01w'