2025-12-23T21:47:01,372 Created temporary directory: /tmp/pip-ephem-wheel-cache-f2nwj98j 2025-12-23T21:47:01,373 Created temporary directory: /tmp/pip-build-tracker-d6048cjn 2025-12-23T21:47:01,374 Initialized build tracking at /tmp/pip-build-tracker-d6048cjn 2025-12-23T21:47:01,374 Created build tracker: /tmp/pip-build-tracker-d6048cjn 2025-12-23T21:47:01,375 Entered build tracker: /tmp/pip-build-tracker-d6048cjn 2025-12-23T21:47:01,376 Created temporary directory: /tmp/pip-wheel-1tcr4asp 2025-12-23T21:47:01,378 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2025-12-23T21:47:01,381 Created temporary directory: /tmp/pip-ephem-wheel-cache-3sh_in61 2025-12-23T21:47:01,402 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-12-23T21:47:01,405 2 location(s) to search for versions of sequenoscope: 2025-12-23T21:47:01,405 * https://pypi.org/simple/sequenoscope/ 2025-12-23T21:47:01,405 * https://www.piwheels.org/simple/sequenoscope/ 2025-12-23T21:47:01,406 Fetching project page and analyzing links: https://pypi.org/simple/sequenoscope/ 2025-12-23T21:47:01,407 Getting page https://pypi.org/simple/sequenoscope/ 2025-12-23T21:47:01,408 Found index url https://pypi.org/simple 2025-12-23T21:47:01,544 Fetched page https://pypi.org/simple/sequenoscope/ as application/vnd.pypi.simple.v1+json 2025-12-23T21:47:01,546 Skipping link: No binaries permitted for sequenoscope: https://files.pythonhosted.org/packages/28/d3/4b2a5360c05b3dd6e298061f95a91f9549022676e2bbb96ff77ef912b77a/sequenoscope-0.0.5-py3-none-any.whl (from https://pypi.org/simple/sequenoscope/) (requires-python:>=3.7.0) 2025-12-23T21:47:01,547 Skipping link: No binaries permitted for sequenoscope: https://files.pythonhosted.org/packages/cc/ac/8240203a9c93620fafdca7ed8a32ca52f49014f88a421fabd044e06805d9/sequenoscope-1.0.0rc1-py3-none-any.whl (from https://pypi.org/simple/sequenoscope/) (requires-python:>=3.7.0) 2025-12-23T21:47:01,548 Found link https://files.pythonhosted.org/packages/a0/f9/3905129a3403bffdcf1314f588e2aceb894f7dbf321e445f1424f50c6c4b/sequenoscope-1.0.0rc1.tar.gz (from https://pypi.org/simple/sequenoscope/) (requires-python:>=3.7.0), version: 1.0.0rc1 2025-12-23T21:47:01,549 Skipping link: No binaries permitted for sequenoscope: https://files.pythonhosted.org/packages/33/22/422330dccc30e336518c6b9810ccd1495c17b7a74445571501a3dae2919e/sequenoscope-1.0.0-py3-none-any.whl (from https://pypi.org/simple/sequenoscope/) (requires-python:>=3.7.0) 2025-12-23T21:47:01,550 Found link https://files.pythonhosted.org/packages/71/a2/5c10b20450aff1ef7c4fdf04d76c64b360fb2a0d4c6c6ad8c1de649466f3/sequenoscope-1.0.0.tar.gz (from https://pypi.org/simple/sequenoscope/) (requires-python:>=3.7.0), version: 1.0.0 2025-12-23T21:47:01,551 Fetching project page and analyzing links: https://www.piwheels.org/simple/sequenoscope/ 2025-12-23T21:47:01,551 Getting page https://www.piwheels.org/simple/sequenoscope/ 2025-12-23T21:47:01,552 Found index url https://www.piwheels.org/simple 2025-12-23T21:47:01,707 Fetched page https://www.piwheels.org/simple/sequenoscope/ as text/html 2025-12-23T21:47:01,709 Skipping link: not a file: https://www.piwheels.org/simple/sequenoscope/ 2025-12-23T21:47:01,709 Skipping link: not a file: https://pypi.org/simple/sequenoscope/ 2025-12-23T21:47:01,728 Given no hashes to check 1 links for project 'sequenoscope': discarding no candidates 2025-12-23T21:47:01,746 Collecting sequenoscope==1.0.0 2025-12-23T21:47:01,748 Created temporary directory: /tmp/pip-unpack-whqn_bqu 2025-12-23T21:47:01,960 Downloading sequenoscope-1.0.0.tar.gz (87 kB) 2025-12-23T21:47:02,104 Added sequenoscope==1.0.0 from https://files.pythonhosted.org/packages/71/a2/5c10b20450aff1ef7c4fdf04d76c64b360fb2a0d4c6c6ad8c1de649466f3/sequenoscope-1.0.0.tar.gz to build tracker '/tmp/pip-build-tracker-d6048cjn' 2025-12-23T21:47:02,105 Running setup.py (path:/tmp/pip-wheel-1tcr4asp/sequenoscope_b8c64ff2d2174197be9fffbce7270637/setup.py) egg_info for package sequenoscope 2025-12-23T21:47:02,106 Created temporary directory: /tmp/pip-pip-egg-info-8q9mhkgj 2025-12-23T21:47:02,107 Preparing metadata (setup.py): started 2025-12-23T21:47:02,108 Running command python setup.py egg_info 2025-12-23T21:47:02,639 /usr/local/lib/python3.11/dist-packages/setuptools/__init__.py:92: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2025-12-23T21:47:02,639 !! 2025-12-23T21:47:02,640 ******************************************************************************** 2025-12-23T21:47:02,641 Requirements should be satisfied by a PEP 517 installer. 2025-12-23T21:47:02,641 If you are using pip, you can try `pip install --use-pep517`. 2025-12-23T21:47:02,642 This deprecation is overdue, please update your project and remove deprecated 2025-12-23T21:47:02,642 calls to avoid build errors in the future. 2025-12-23T21:47:02,643 ******************************************************************************** 2025-12-23T21:47:02,644 !! 2025-12-23T21:47:02,644 dist.fetch_build_eggs(dist.setup_requires) 2025-12-23T21:47:05,454 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'tests_require' 2025-12-23T21:47:05,455 warnings.warn(msg) 2025-12-23T21:47:05,515 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-12-23T21:47:05,515 !! 2025-12-23T21:47:05,516 ******************************************************************************** 2025-12-23T21:47:05,517 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-12-23T21:47:05,518 License :: OSI Approved :: Apache Software License 2025-12-23T21:47:05,519 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-12-23T21:47:05,520 ******************************************************************************** 2025-12-23T21:47:05,521 !! 2025-12-23T21:47:05,521 self._finalize_license_expression() 2025-12-23T21:47:05,546 running egg_info 2025-12-23T21:47:05,575 creating /tmp/pip-pip-egg-info-8q9mhkgj/sequenoscope.egg-info 2025-12-23T21:47:05,576 writing /tmp/pip-pip-egg-info-8q9mhkgj/sequenoscope.egg-info/PKG-INFO 2025-12-23T21:47:05,581 writing dependency_links to /tmp/pip-pip-egg-info-8q9mhkgj/sequenoscope.egg-info/dependency_links.txt 2025-12-23T21:47:05,583 writing entry points to /tmp/pip-pip-egg-info-8q9mhkgj/sequenoscope.egg-info/entry_points.txt 2025-12-23T21:47:05,584 writing requirements to /tmp/pip-pip-egg-info-8q9mhkgj/sequenoscope.egg-info/requires.txt 2025-12-23T21:47:05,585 writing top-level names to /tmp/pip-pip-egg-info-8q9mhkgj/sequenoscope.egg-info/top_level.txt 2025-12-23T21:47:05,586 writing manifest file '/tmp/pip-pip-egg-info-8q9mhkgj/sequenoscope.egg-info/SOURCES.txt' 2025-12-23T21:47:05,695 reading manifest file '/tmp/pip-pip-egg-info-8q9mhkgj/sequenoscope.egg-info/SOURCES.txt' 2025-12-23T21:47:05,696 reading manifest template 'MANIFEST.in' 2025-12-23T21:47:05,698 adding license file 'LICENSE' 2025-12-23T21:47:05,701 writing manifest file '/tmp/pip-pip-egg-info-8q9mhkgj/sequenoscope.egg-info/SOURCES.txt' 2025-12-23T21:47:05,816 Preparing metadata (setup.py): finished with status 'done' 2025-12-23T21:47:05,824 Source in /tmp/pip-wheel-1tcr4asp/sequenoscope_b8c64ff2d2174197be9fffbce7270637 has version 1.0.0, which satisfies requirement sequenoscope==1.0.0 from https://files.pythonhosted.org/packages/71/a2/5c10b20450aff1ef7c4fdf04d76c64b360fb2a0d4c6c6ad8c1de649466f3/sequenoscope-1.0.0.tar.gz 2025-12-23T21:47:05,825 Removed sequenoscope==1.0.0 from https://files.pythonhosted.org/packages/71/a2/5c10b20450aff1ef7c4fdf04d76c64b360fb2a0d4c6c6ad8c1de649466f3/sequenoscope-1.0.0.tar.gz from build tracker '/tmp/pip-build-tracker-d6048cjn' 2025-12-23T21:47:05,837 Created temporary directory: /tmp/pip-unpack-_ru695tp 2025-12-23T21:47:05,838 Building wheels for collected packages: sequenoscope 2025-12-23T21:47:05,842 Created temporary directory: /tmp/pip-wheel-_lsqnvmi 2025-12-23T21:47:05,843 Building wheel for sequenoscope (setup.py): started 2025-12-23T21:47:05,844 Destination directory: /tmp/pip-wheel-_lsqnvmi 2025-12-23T21:47:05,844 Running command python setup.py bdist_wheel 2025-12-23T21:47:06,396 /usr/local/lib/python3.11/dist-packages/setuptools/__init__.py:92: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2025-12-23T21:47:06,397 !! 2025-12-23T21:47:06,398 ******************************************************************************** 2025-12-23T21:47:06,398 Requirements should be satisfied by a PEP 517 installer. 2025-12-23T21:47:06,399 If you are using pip, you can try `pip install --use-pep517`. 2025-12-23T21:47:06,400 This deprecation is overdue, please update your project and remove deprecated 2025-12-23T21:47:06,400 calls to avoid build errors in the future. 2025-12-23T21:47:06,401 ******************************************************************************** 2025-12-23T21:47:06,401 !! 2025-12-23T21:47:06,402 dist.fetch_build_eggs(dist.setup_requires) 2025-12-23T21:47:06,635 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'tests_require' 2025-12-23T21:47:06,636 warnings.warn(msg) 2025-12-23T21:47:06,934 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-12-23T21:47:06,934 !! 2025-12-23T21:47:06,935 ******************************************************************************** 2025-12-23T21:47:06,936 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-12-23T21:47:06,937 License :: OSI Approved :: Apache Software License 2025-12-23T21:47:06,938 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-12-23T21:47:06,939 ******************************************************************************** 2025-12-23T21:47:06,940 !! 2025-12-23T21:47:06,941 self._finalize_license_expression() 2025-12-23T21:47:06,941 running bdist_wheel 2025-12-23T21:47:07,084 running build 2025-12-23T21:47:07,085 running build_py 2025-12-23T21:47:07,120 creating build/lib/sequenoscope 2025-12-23T21:47:07,122 copying sequenoscope/main.py -> build/lib/sequenoscope 2025-12-23T21:47:07,125 copying sequenoscope/constant.py -> build/lib/sequenoscope 2025-12-23T21:47:07,127 copying sequenoscope/version.py -> build/lib/sequenoscope 2025-12-23T21:47:07,129 copying sequenoscope/__init__.py -> build/lib/sequenoscope 2025-12-23T21:47:07,131 creating build/lib/sequenoscope/utils 2025-12-23T21:47:07,132 copying sequenoscope/utils/sequence_class.py -> build/lib/sequenoscope/utils 2025-12-23T21:47:07,134 copying sequenoscope/utils/parser.py -> build/lib/sequenoscope/utils 2025-12-23T21:47:07,137 copying sequenoscope/utils/__init__.py -> build/lib/sequenoscope/utils 2025-12-23T21:47:07,139 creating build/lib/sequenoscope/plot 2025-12-23T21:47:07,140 copying sequenoscope/plot/plot.py -> build/lib/sequenoscope/plot 2025-12-23T21:47:07,143 copying sequenoscope/plot/seq_manifest_plots.py -> build/lib/sequenoscope/plot 2025-12-23T21:47:07,146 copying sequenoscope/plot/decision_bar_chart.py -> build/lib/sequenoscope/plot 2025-12-23T21:47:07,148 copying sequenoscope/plot/pytest_test.py -> build/lib/sequenoscope/plot 2025-12-23T21:47:07,151 copying sequenoscope/plot/summary_table.py -> build/lib/sequenoscope/plot 2025-12-23T21:47:07,153 copying sequenoscope/plot/__init__.py -> build/lib/sequenoscope/plot 2025-12-23T21:47:07,155 copying sequenoscope/plot/violin_plot.py -> build/lib/sequenoscope/plot 2025-12-23T21:47:07,158 creating build/lib/sequenoscope/filter_ONT 2025-12-23T21:47:07,159 copying sequenoscope/filter_ONT/seq_summary_processing.py -> build/lib/sequenoscope/filter_ONT 2025-12-23T21:47:07,161 copying sequenoscope/filter_ONT/barcode_statistics.py -> build/lib/sequenoscope/filter_ONT 2025-12-23T21:47:07,164 copying sequenoscope/filter_ONT/pytest_test.py -> build/lib/sequenoscope/filter_ONT 2025-12-23T21:47:07,165 copying sequenoscope/filter_ONT/filter_ONT.py -> build/lib/sequenoscope/filter_ONT 2025-12-23T21:47:07,168 copying sequenoscope/filter_ONT/seqtk.py -> build/lib/sequenoscope/filter_ONT 2025-12-23T21:47:07,170 copying sequenoscope/filter_ONT/__init__.py -> build/lib/sequenoscope/filter_ONT 2025-12-23T21:47:07,172 creating build/lib/sequenoscope/analyze 2025-12-23T21:47:07,173 copying sequenoscope/analyze/processing.py -> build/lib/sequenoscope/analyze 2025-12-23T21:47:07,176 copying sequenoscope/analyze/fastP.py -> build/lib/sequenoscope/analyze 2025-12-23T21:47:07,178 copying sequenoscope/analyze/kat.py -> build/lib/sequenoscope/analyze 2025-12-23T21:47:07,180 copying sequenoscope/analyze/bam.py -> build/lib/sequenoscope/analyze 2025-12-23T21:47:07,182 copying sequenoscope/analyze/analyze.py -> build/lib/sequenoscope/analyze 2025-12-23T21:47:07,185 copying sequenoscope/analyze/seq_manifest.py -> build/lib/sequenoscope/analyze 2025-12-23T21:47:07,188 copying sequenoscope/analyze/minimap2.py -> build/lib/sequenoscope/analyze 2025-12-23T21:47:07,190 copying sequenoscope/analyze/pytest_test.py -> build/lib/sequenoscope/analyze 2025-12-23T21:47:07,192 copying sequenoscope/analyze/__init__.py -> build/lib/sequenoscope/analyze 2025-12-23T21:47:07,194 copying sequenoscope/analyze/mash.py -> build/lib/sequenoscope/analyze 2025-12-23T21:47:07,196 copying sequenoscope/analyze/fastq_extractor.py -> build/lib/sequenoscope/analyze 2025-12-23T21:47:07,198 running egg_info 2025-12-23T21:47:07,228 writing sequenoscope.egg-info/PKG-INFO 2025-12-23T21:47:07,233 writing dependency_links to sequenoscope.egg-info/dependency_links.txt 2025-12-23T21:47:07,235 writing entry points to sequenoscope.egg-info/entry_points.txt 2025-12-23T21:47:07,236 writing requirements to sequenoscope.egg-info/requires.txt 2025-12-23T21:47:07,237 writing top-level names to sequenoscope.egg-info/top_level.txt 2025-12-23T21:47:07,277 reading manifest file 'sequenoscope.egg-info/SOURCES.txt' 2025-12-23T21:47:07,282 reading manifest template 'MANIFEST.in' 2025-12-23T21:47:07,283 adding license file 'LICENSE' 2025-12-23T21:47:07,287 writing manifest file 'sequenoscope.egg-info/SOURCES.txt' 2025-12-23T21:47:07,326 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2025-12-23T21:47:07,327 !! 2025-12-23T21:47:07,328 ******************************************************************************** 2025-12-23T21:47:07,328 Please avoid running ``setup.py`` directly. 2025-12-23T21:47:07,329 Instead, use pypa/build, pypa/installer or other 2025-12-23T21:47:07,330 standards-based tools. 2025-12-23T21:47:07,331 This deprecation is overdue, please update your project and remove deprecated 2025-12-23T21:47:07,332 calls to avoid build errors in the future. 2025-12-23T21:47:07,333 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2025-12-23T21:47:07,333 ******************************************************************************** 2025-12-23T21:47:07,335 !! 2025-12-23T21:47:07,335 self.initialize_options() 2025-12-23T21:47:07,358 installing to build/bdist.linux-armv7l/wheel 2025-12-23T21:47:07,359 running install 2025-12-23T21:47:07,382 running install_lib 2025-12-23T21:47:07,411 creating build/bdist.linux-armv7l/wheel 2025-12-23T21:47:07,414 creating build/bdist.linux-armv7l/wheel/sequenoscope 2025-12-23T21:47:07,416 creating build/bdist.linux-armv7l/wheel/sequenoscope/utils 2025-12-23T21:47:07,417 copying build/lib/sequenoscope/utils/sequence_class.py -> build/bdist.linux-armv7l/wheel/./sequenoscope/utils 2025-12-23T21:47:07,419 copying build/lib/sequenoscope/utils/parser.py -> build/bdist.linux-armv7l/wheel/./sequenoscope/utils 2025-12-23T21:47:07,421 copying build/lib/sequenoscope/utils/__init__.py -> build/bdist.linux-armv7l/wheel/./sequenoscope/utils 2025-12-23T21:47:07,424 creating build/bdist.linux-armv7l/wheel/sequenoscope/plot 2025-12-23T21:47:07,425 copying build/lib/sequenoscope/plot/plot.py -> build/bdist.linux-armv7l/wheel/./sequenoscope/plot 2025-12-23T21:47:07,428 copying build/lib/sequenoscope/plot/seq_manifest_plots.py -> build/bdist.linux-armv7l/wheel/./sequenoscope/plot 2025-12-23T21:47:07,430 copying build/lib/sequenoscope/plot/decision_bar_chart.py -> build/bdist.linux-armv7l/wheel/./sequenoscope/plot 2025-12-23T21:47:07,433 copying build/lib/sequenoscope/plot/pytest_test.py -> build/bdist.linux-armv7l/wheel/./sequenoscope/plot 2025-12-23T21:47:07,435 copying build/lib/sequenoscope/plot/summary_table.py -> build/bdist.linux-armv7l/wheel/./sequenoscope/plot 2025-12-23T21:47:07,437 copying build/lib/sequenoscope/plot/__init__.py -> build/bdist.linux-armv7l/wheel/./sequenoscope/plot 2025-12-23T21:47:07,439 copying build/lib/sequenoscope/plot/violin_plot.py -> build/bdist.linux-armv7l/wheel/./sequenoscope/plot 2025-12-23T21:47:07,441 copying build/lib/sequenoscope/main.py -> build/bdist.linux-armv7l/wheel/./sequenoscope 2025-12-23T21:47:07,444 creating build/bdist.linux-armv7l/wheel/sequenoscope/filter_ONT 2025-12-23T21:47:07,445 copying build/lib/sequenoscope/filter_ONT/seq_summary_processing.py -> build/bdist.linux-armv7l/wheel/./sequenoscope/filter_ONT 2025-12-23T21:47:07,448 copying build/lib/sequenoscope/filter_ONT/barcode_statistics.py -> build/bdist.linux-armv7l/wheel/./sequenoscope/filter_ONT 2025-12-23T21:47:07,450 copying build/lib/sequenoscope/filter_ONT/pytest_test.py -> build/bdist.linux-armv7l/wheel/./sequenoscope/filter_ONT 2025-12-23T21:47:07,452 copying build/lib/sequenoscope/filter_ONT/filter_ONT.py -> build/bdist.linux-armv7l/wheel/./sequenoscope/filter_ONT 2025-12-23T21:47:07,454 copying build/lib/sequenoscope/filter_ONT/seqtk.py -> build/bdist.linux-armv7l/wheel/./sequenoscope/filter_ONT 2025-12-23T21:47:07,457 copying build/lib/sequenoscope/filter_ONT/__init__.py -> build/bdist.linux-armv7l/wheel/./sequenoscope/filter_ONT 2025-12-23T21:47:07,459 copying build/lib/sequenoscope/constant.py -> build/bdist.linux-armv7l/wheel/./sequenoscope 2025-12-23T21:47:07,461 copying build/lib/sequenoscope/version.py -> build/bdist.linux-armv7l/wheel/./sequenoscope 2025-12-23T21:47:07,463 creating build/bdist.linux-armv7l/wheel/sequenoscope/analyze 2025-12-23T21:47:07,464 copying build/lib/sequenoscope/analyze/processing.py -> build/bdist.linux-armv7l/wheel/./sequenoscope/analyze 2025-12-23T21:47:07,466 copying build/lib/sequenoscope/analyze/fastP.py -> build/bdist.linux-armv7l/wheel/./sequenoscope/analyze 2025-12-23T21:47:07,469 copying build/lib/sequenoscope/analyze/kat.py -> build/bdist.linux-armv7l/wheel/./sequenoscope/analyze 2025-12-23T21:47:07,471 copying build/lib/sequenoscope/analyze/bam.py -> build/bdist.linux-armv7l/wheel/./sequenoscope/analyze 2025-12-23T21:47:07,473 copying build/lib/sequenoscope/analyze/analyze.py -> build/bdist.linux-armv7l/wheel/./sequenoscope/analyze 2025-12-23T21:47:07,476 copying build/lib/sequenoscope/analyze/seq_manifest.py -> build/bdist.linux-armv7l/wheel/./sequenoscope/analyze 2025-12-23T21:47:07,478 copying build/lib/sequenoscope/analyze/minimap2.py -> build/bdist.linux-armv7l/wheel/./sequenoscope/analyze 2025-12-23T21:47:07,480 copying build/lib/sequenoscope/analyze/pytest_test.py -> build/bdist.linux-armv7l/wheel/./sequenoscope/analyze 2025-12-23T21:47:07,483 copying build/lib/sequenoscope/analyze/__init__.py -> build/bdist.linux-armv7l/wheel/./sequenoscope/analyze 2025-12-23T21:47:07,485 copying build/lib/sequenoscope/analyze/mash.py -> build/bdist.linux-armv7l/wheel/./sequenoscope/analyze 2025-12-23T21:47:07,487 copying build/lib/sequenoscope/analyze/fastq_extractor.py -> build/bdist.linux-armv7l/wheel/./sequenoscope/analyze 2025-12-23T21:47:07,489 copying build/lib/sequenoscope/__init__.py -> build/bdist.linux-armv7l/wheel/./sequenoscope 2025-12-23T21:47:07,491 running install_egg_info 2025-12-23T21:47:07,522 Copying sequenoscope.egg-info to build/bdist.linux-armv7l/wheel/./sequenoscope-1.0.0-py3.11.egg-info 2025-12-23T21:47:07,535 running install_scripts 2025-12-23T21:47:07,550 creating build/bdist.linux-armv7l/wheel/sequenoscope-1.0.0.dist-info/WHEEL 2025-12-23T21:47:07,553 creating '/tmp/pip-wheel-_lsqnvmi/sequenoscope-1.0.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-12-23T21:47:07,555 adding 'sequenoscope/__init__.py' 2025-12-23T21:47:07,557 adding 'sequenoscope/constant.py' 2025-12-23T21:47:07,558 adding 'sequenoscope/main.py' 2025-12-23T21:47:07,559 adding 'sequenoscope/version.py' 2025-12-23T21:47:07,561 adding 'sequenoscope/analyze/__init__.py' 2025-12-23T21:47:07,564 adding 'sequenoscope/analyze/analyze.py' 2025-12-23T21:47:07,565 adding 'sequenoscope/analyze/bam.py' 2025-12-23T21:47:07,567 adding 'sequenoscope/analyze/fastP.py' 2025-12-23T21:47:07,569 adding 'sequenoscope/analyze/fastq_extractor.py' 2025-12-23T21:47:07,570 adding 'sequenoscope/analyze/kat.py' 2025-12-23T21:47:07,572 adding 'sequenoscope/analyze/mash.py' 2025-12-23T21:47:07,573 adding 'sequenoscope/analyze/minimap2.py' 2025-12-23T21:47:07,574 adding 'sequenoscope/analyze/processing.py' 2025-12-23T21:47:07,576 adding 'sequenoscope/analyze/pytest_test.py' 2025-12-23T21:47:07,578 adding 'sequenoscope/analyze/seq_manifest.py' 2025-12-23T21:47:07,580 adding 'sequenoscope/filter_ONT/__init__.py' 2025-12-23T21:47:07,581 adding 'sequenoscope/filter_ONT/barcode_statistics.py' 2025-12-23T21:47:07,583 adding 'sequenoscope/filter_ONT/filter_ONT.py' 2025-12-23T21:47:07,585 adding 'sequenoscope/filter_ONT/pytest_test.py' 2025-12-23T21:47:07,587 adding 'sequenoscope/filter_ONT/seq_summary_processing.py' 2025-12-23T21:47:07,588 adding 'sequenoscope/filter_ONT/seqtk.py' 2025-12-23T21:47:07,590 adding 'sequenoscope/plot/__init__.py' 2025-12-23T21:47:07,592 adding 'sequenoscope/plot/decision_bar_chart.py' 2025-12-23T21:47:07,593 adding 'sequenoscope/plot/plot.py' 2025-12-23T21:47:07,595 adding 'sequenoscope/plot/pytest_test.py' 2025-12-23T21:47:07,596 adding 'sequenoscope/plot/seq_manifest_plots.py' 2025-12-23T21:47:07,598 adding 'sequenoscope/plot/summary_table.py' 2025-12-23T21:47:07,600 adding 'sequenoscope/plot/violin_plot.py' 2025-12-23T21:47:07,601 adding 'sequenoscope/utils/__init__.py' 2025-12-23T21:47:07,603 adding 'sequenoscope/utils/parser.py' 2025-12-23T21:47:07,605 adding 'sequenoscope/utils/sequence_class.py' 2025-12-23T21:47:07,608 adding 'sequenoscope-1.0.0.dist-info/licenses/LICENSE' 2025-12-23T21:47:07,615 adding 'sequenoscope-1.0.0.dist-info/METADATA' 2025-12-23T21:47:07,616 adding 'sequenoscope-1.0.0.dist-info/WHEEL' 2025-12-23T21:47:07,617 adding 'sequenoscope-1.0.0.dist-info/entry_points.txt' 2025-12-23T21:47:07,618 adding 'sequenoscope-1.0.0.dist-info/top_level.txt' 2025-12-23T21:47:07,619 adding 'sequenoscope-1.0.0.dist-info/RECORD' 2025-12-23T21:47:07,622 removing build/bdist.linux-armv7l/wheel 2025-12-23T21:47:07,744 Building wheel for sequenoscope (setup.py): finished with status 'done' 2025-12-23T21:47:07,747 Created wheel for sequenoscope: filename=sequenoscope-1.0.0-py3-none-any.whl size=71941 sha256=32f7c4a7d1bef1bc2fbe53f608717b60a443d8c378c8593aafd506330374740a 2025-12-23T21:47:07,748 Stored in directory: /tmp/pip-ephem-wheel-cache-3sh_in61/wheels/d4/d5/c3/f304beff337c1ff918263cfd2a44b8db50ce7685b26d858f68 2025-12-23T21:47:07,768 Successfully built sequenoscope 2025-12-23T21:47:07,773 Removed build tracker: '/tmp/pip-build-tracker-d6048cjn'