2025-12-30T00:35:12,767 Created temporary directory: /tmp/pip-ephem-wheel-cache-49d84942 2025-12-30T00:35:12,769 Created temporary directory: /tmp/pip-build-tracker-6jrcrc9_ 2025-12-30T00:35:12,770 Initialized build tracking at /tmp/pip-build-tracker-6jrcrc9_ 2025-12-30T00:35:12,770 Created build tracker: /tmp/pip-build-tracker-6jrcrc9_ 2025-12-30T00:35:12,771 Entered build tracker: /tmp/pip-build-tracker-6jrcrc9_ 2025-12-30T00:35:12,772 Created temporary directory: /tmp/pip-wheel-cc3ka7js 2025-12-30T00:35:12,775 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2025-12-30T00:35:12,777 Created temporary directory: /tmp/pip-ephem-wheel-cache-dlhorccr 2025-12-30T00:35:12,799 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-12-30T00:35:12,803 2 location(s) to search for versions of nuxl-rescore: 2025-12-30T00:35:12,803 * https://pypi.org/simple/nuxl-rescore/ 2025-12-30T00:35:12,803 * https://www.piwheels.org/simple/nuxl-rescore/ 2025-12-30T00:35:12,804 Fetching project page and analyzing links: https://pypi.org/simple/nuxl-rescore/ 2025-12-30T00:35:12,804 Getting page https://pypi.org/simple/nuxl-rescore/ 2025-12-30T00:35:12,806 Found index url https://pypi.org/simple 2025-12-30T00:35:13,092 Fetched page https://pypi.org/simple/nuxl-rescore/ as application/vnd.pypi.simple.v1+json 2025-12-30T00:35:13,094 Skipping link: No binaries permitted for nuxl-rescore: https://files.pythonhosted.org/packages/39/3d/2a2232fff41a6d8fff18c9a37a72b1330af8b98c8f51bcd1eb12fcbc86cb/nuxl_rescore-0.1.0-py3-none-any.whl (from https://pypi.org/simple/nuxl-rescore/) (requires-python:>=3.10) 2025-12-30T00:35:13,095 Found link https://files.pythonhosted.org/packages/25/5e/75ad5727e70a23b35018585b62ece7a100e3517bcedbde77c88bb06357b7/nuxl_rescore-0.1.0.tar.gz (from https://pypi.org/simple/nuxl-rescore/) (requires-python:>=3.10), version: 0.1.0 2025-12-30T00:35:13,096 Skipping link: No binaries permitted for nuxl-rescore: https://files.pythonhosted.org/packages/50/48/32d0af9ec17f8fda0935ddf27d4d75b0fd1c0e7d4d491a158828b07936f9/nuxl_rescore-0.2.0-py3-none-any.whl (from https://pypi.org/simple/nuxl-rescore/) (requires-python:>=3.10) 2025-12-30T00:35:13,097 Found link https://files.pythonhosted.org/packages/48/d2/2b959b11d413b86f5b8698cb55995bc1996dcdcf53d75eb000473e7908dd/nuxl_rescore-0.2.0.tar.gz (from https://pypi.org/simple/nuxl-rescore/) (requires-python:>=3.10), version: 0.2.0 2025-12-30T00:35:13,098 Fetching project page and analyzing links: https://www.piwheels.org/simple/nuxl-rescore/ 2025-12-30T00:35:13,099 Getting page https://www.piwheels.org/simple/nuxl-rescore/ 2025-12-30T00:35:13,100 Found index url https://www.piwheels.org/simple 2025-12-30T00:35:13,300 Fetched page https://www.piwheels.org/simple/nuxl-rescore/ as text/html 2025-12-30T00:35:13,301 Skipping link: No binaries permitted for nuxl-rescore: https://www.piwheels.org/simple/nuxl-rescore/nuxl_rescore-0.1.0-py3-none-any.whl#sha256=d6a87a43cfc246994d317b7ef07dc42cd54e5c4e6ff961ed17d2056720f569c9 (from https://www.piwheels.org/simple/nuxl-rescore/) (requires-python:>=3.10) 2025-12-30T00:35:13,302 Skipping link: not a file: https://www.piwheels.org/simple/nuxl-rescore/ 2025-12-30T00:35:13,303 Skipping link: not a file: https://pypi.org/simple/nuxl-rescore/ 2025-12-30T00:35:13,322 Given no hashes to check 1 links for project 'nuxl-rescore': discarding no candidates 2025-12-30T00:35:13,340 Collecting nuxl-rescore==0.2.0 2025-12-30T00:35:13,342 Created temporary directory: /tmp/pip-unpack-5nageval 2025-12-30T00:35:13,480 Downloading nuxl_rescore-0.2.0.tar.gz (37 kB) 2025-12-30T00:35:13,579 Added nuxl-rescore==0.2.0 from https://files.pythonhosted.org/packages/48/d2/2b959b11d413b86f5b8698cb55995bc1996dcdcf53d75eb000473e7908dd/nuxl_rescore-0.2.0.tar.gz to build tracker '/tmp/pip-build-tracker-6jrcrc9_' 2025-12-30T00:35:13,583 Created temporary directory: /tmp/pip-build-env-okeexgc9 2025-12-30T00:35:13,588 Installing build dependencies: started 2025-12-30T00:35:13,589 Running command pip subprocess to install build dependencies 2025-12-30T00:35:14,756 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2025-12-30T00:35:15,408 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2025-12-30T00:35:15,430 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-12-30T00:35:17,161 Collecting setuptools 2025-12-30T00:35:17,258 Using cached https://www.piwheels.org/simple/setuptools/setuptools-80.9.0-py3-none-any.whl (1.2 MB) 2025-12-30T00:35:20,283 Installing collected packages: setuptools 2025-12-30T00:35:23,852 Successfully installed setuptools-80.9.0 2025-12-30T00:35:24,119 Installing build dependencies: finished with status 'done' 2025-12-30T00:35:24,125 Getting requirements to build wheel: started 2025-12-30T00:35:24,126 Running command Getting requirements to build wheel 2025-12-30T00:35:24,782 /tmp/pip-build-env-okeexgc9/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2025-12-30T00:35:24,782 !! 2025-12-30T00:35:24,783 ******************************************************************************** 2025-12-30T00:35:24,784 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2025-12-30T00:35:24,785 By 2026-Feb-18, you need to update your project and remove deprecated calls 2025-12-30T00:35:24,786 or your builds will no longer be supported. 2025-12-30T00:35:24,787 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-12-30T00:35:24,787 ******************************************************************************** 2025-12-30T00:35:24,788 !! 2025-12-30T00:35:24,789 corresp(dist, value, root_dir) 2025-12-30T00:35:24,881 running egg_info 2025-12-30T00:35:24,888 writing nuxl_rescore.egg-info/PKG-INFO 2025-12-30T00:35:24,893 writing dependency_links to nuxl_rescore.egg-info/dependency_links.txt 2025-12-30T00:35:24,894 writing entry points to nuxl_rescore.egg-info/entry_points.txt 2025-12-30T00:35:24,896 writing requirements to nuxl_rescore.egg-info/requires.txt 2025-12-30T00:35:24,898 writing top-level names to nuxl_rescore.egg-info/top_level.txt 2025-12-30T00:35:24,920 reading manifest file 'nuxl_rescore.egg-info/SOURCES.txt' 2025-12-30T00:35:24,923 reading manifest template 'MANIFEST.in' 2025-12-30T00:35:24,924 warning: no directories found matching 'nuxl_rescore/unimod' 2025-12-30T00:35:24,924 adding license file 'LICENSE' 2025-12-30T00:35:24,928 writing manifest file 'nuxl_rescore.egg-info/SOURCES.txt' 2025-12-30T00:35:25,025 Getting requirements to build wheel: finished with status 'done' 2025-12-30T00:35:25,029 Created temporary directory: /tmp/pip-modern-metadata-l0l1y0w4 2025-12-30T00:35:25,031 Preparing metadata (pyproject.toml): started 2025-12-30T00:35:25,032 Running command Preparing metadata (pyproject.toml) 2025-12-30T00:35:25,622 /tmp/pip-build-env-okeexgc9/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2025-12-30T00:35:25,623 !! 2025-12-30T00:35:25,624 ******************************************************************************** 2025-12-30T00:35:25,625 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2025-12-30T00:35:25,626 By 2026-Feb-18, you need to update your project and remove deprecated calls 2025-12-30T00:35:25,626 or your builds will no longer be supported. 2025-12-30T00:35:25,627 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-12-30T00:35:25,628 ******************************************************************************** 2025-12-30T00:35:25,629 !! 2025-12-30T00:35:25,629 corresp(dist, value, root_dir) 2025-12-30T00:35:25,718 running dist_info 2025-12-30T00:35:25,730 creating /tmp/pip-modern-metadata-l0l1y0w4/nuxl_rescore.egg-info 2025-12-30T00:35:25,731 writing /tmp/pip-modern-metadata-l0l1y0w4/nuxl_rescore.egg-info/PKG-INFO 2025-12-30T00:35:25,735 writing dependency_links to /tmp/pip-modern-metadata-l0l1y0w4/nuxl_rescore.egg-info/dependency_links.txt 2025-12-30T00:35:25,737 writing entry points to /tmp/pip-modern-metadata-l0l1y0w4/nuxl_rescore.egg-info/entry_points.txt 2025-12-30T00:35:25,738 writing requirements to /tmp/pip-modern-metadata-l0l1y0w4/nuxl_rescore.egg-info/requires.txt 2025-12-30T00:35:25,739 writing top-level names to /tmp/pip-modern-metadata-l0l1y0w4/nuxl_rescore.egg-info/top_level.txt 2025-12-30T00:35:25,741 writing manifest file '/tmp/pip-modern-metadata-l0l1y0w4/nuxl_rescore.egg-info/SOURCES.txt' 2025-12-30T00:35:25,760 reading manifest file '/tmp/pip-modern-metadata-l0l1y0w4/nuxl_rescore.egg-info/SOURCES.txt' 2025-12-30T00:35:25,762 reading manifest template 'MANIFEST.in' 2025-12-30T00:35:25,763 warning: no directories found matching 'nuxl_rescore/unimod' 2025-12-30T00:35:25,764 adding license file 'LICENSE' 2025-12-30T00:35:25,767 writing manifest file '/tmp/pip-modern-metadata-l0l1y0w4/nuxl_rescore.egg-info/SOURCES.txt' 2025-12-30T00:35:25,768 creating '/tmp/pip-modern-metadata-l0l1y0w4/nuxl_rescore-0.2.0.dist-info' 2025-12-30T00:35:25,897 Preparing metadata (pyproject.toml): finished with status 'done' 2025-12-30T00:35:25,904 Source in /tmp/pip-wheel-cc3ka7js/nuxl-rescore_052c954a587b41aab3fa5bdb8b349890 has version 0.2.0, which satisfies requirement nuxl-rescore==0.2.0 from https://files.pythonhosted.org/packages/48/d2/2b959b11d413b86f5b8698cb55995bc1996dcdcf53d75eb000473e7908dd/nuxl_rescore-0.2.0.tar.gz 2025-12-30T00:35:25,905 Removed nuxl-rescore==0.2.0 from https://files.pythonhosted.org/packages/48/d2/2b959b11d413b86f5b8698cb55995bc1996dcdcf53d75eb000473e7908dd/nuxl_rescore-0.2.0.tar.gz from build tracker '/tmp/pip-build-tracker-6jrcrc9_' 2025-12-30T00:35:25,916 Created temporary directory: /tmp/pip-unpack-r382zmtz 2025-12-30T00:35:25,917 Building wheels for collected packages: nuxl-rescore 2025-12-30T00:35:25,921 Created temporary directory: /tmp/pip-wheel-qkgj0jnv 2025-12-30T00:35:25,922 Destination directory: /tmp/pip-wheel-qkgj0jnv 2025-12-30T00:35:25,924 Building wheel for nuxl-rescore (pyproject.toml): started 2025-12-30T00:35:25,925 Running command Building wheel for nuxl-rescore (pyproject.toml) 2025-12-30T00:35:26,470 /tmp/pip-build-env-okeexgc9/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2025-12-30T00:35:26,471 !! 2025-12-30T00:35:26,472 ******************************************************************************** 2025-12-30T00:35:26,472 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2025-12-30T00:35:26,473 By 2026-Feb-18, you need to update your project and remove deprecated calls 2025-12-30T00:35:26,474 or your builds will no longer be supported. 2025-12-30T00:35:26,476 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-12-30T00:35:26,476 ******************************************************************************** 2025-12-30T00:35:26,477 !! 2025-12-30T00:35:26,477 corresp(dist, value, root_dir) 2025-12-30T00:35:26,556 running bdist_wheel 2025-12-30T00:35:26,577 running build 2025-12-30T00:35:26,577 running build_py 2025-12-30T00:35:26,584 creating build/lib/nuxl_rescore 2025-12-30T00:35:26,586 copying nuxl_rescore/RT_features.py -> build/lib/nuxl_rescore 2025-12-30T00:35:26,588 copying nuxl_rescore/main.py -> build/lib/nuxl_rescore 2025-12-30T00:35:26,590 copying nuxl_rescore/__init__.py -> build/lib/nuxl_rescore 2025-12-30T00:35:26,592 copying nuxl_rescore/Data_parser.py -> build/lib/nuxl_rescore 2025-12-30T00:35:26,595 copying nuxl_rescore/idXML2df.py -> build/lib/nuxl_rescore 2025-12-30T00:35:26,597 copying nuxl_rescore/FDR_calculation.py -> build/lib/nuxl_rescore 2025-12-30T00:35:26,599 copying nuxl_rescore/plotting.py -> build/lib/nuxl_rescore 2025-12-30T00:35:26,601 copying nuxl_rescore/entrapment.py -> build/lib/nuxl_rescore 2025-12-30T00:35:26,603 copying nuxl_rescore/run.py -> build/lib/nuxl_rescore 2025-12-30T00:35:26,605 copying nuxl_rescore/cli.py -> build/lib/nuxl_rescore 2025-12-30T00:35:26,607 copying nuxl_rescore/ms2pip_features.py -> build/lib/nuxl_rescore 2025-12-30T00:35:26,610 copying nuxl_rescore/NA_Encoding.py -> build/lib/nuxl_rescore 2025-12-30T00:35:26,612 running egg_info 2025-12-30T00:35:26,623 writing nuxl_rescore.egg-info/PKG-INFO 2025-12-30T00:35:26,627 writing dependency_links to nuxl_rescore.egg-info/dependency_links.txt 2025-12-30T00:35:26,629 writing entry points to nuxl_rescore.egg-info/entry_points.txt 2025-12-30T00:35:26,630 writing requirements to nuxl_rescore.egg-info/requires.txt 2025-12-30T00:35:26,631 writing top-level names to nuxl_rescore.egg-info/top_level.txt 2025-12-30T00:35:26,641 reading manifest file 'nuxl_rescore.egg-info/SOURCES.txt' 2025-12-30T00:35:26,644 reading manifest template 'MANIFEST.in' 2025-12-30T00:35:26,645 warning: no directories found matching 'nuxl_rescore/unimod' 2025-12-30T00:35:26,645 adding license file 'LICENSE' 2025-12-30T00:35:26,648 writing manifest file 'nuxl_rescore.egg-info/SOURCES.txt' 2025-12-30T00:35:26,661 installing to build/bdist.linux-armv7l/wheel 2025-12-30T00:35:26,662 running install 2025-12-30T00:35:26,686 running install_lib 2025-12-30T00:35:26,692 creating build/bdist.linux-armv7l/wheel 2025-12-30T00:35:26,694 creating build/bdist.linux-armv7l/wheel/nuxl_rescore 2025-12-30T00:35:26,696 copying build/lib/nuxl_rescore/RT_features.py -> build/bdist.linux-armv7l/wheel/./nuxl_rescore 2025-12-30T00:35:26,698 copying build/lib/nuxl_rescore/main.py -> build/bdist.linux-armv7l/wheel/./nuxl_rescore 2025-12-30T00:35:26,700 copying build/lib/nuxl_rescore/__init__.py -> build/bdist.linux-armv7l/wheel/./nuxl_rescore 2025-12-30T00:35:26,701 copying build/lib/nuxl_rescore/Data_parser.py -> build/bdist.linux-armv7l/wheel/./nuxl_rescore 2025-12-30T00:35:26,704 copying build/lib/nuxl_rescore/idXML2df.py -> build/bdist.linux-armv7l/wheel/./nuxl_rescore 2025-12-30T00:35:26,706 copying build/lib/nuxl_rescore/FDR_calculation.py -> build/bdist.linux-armv7l/wheel/./nuxl_rescore 2025-12-30T00:35:26,709 copying build/lib/nuxl_rescore/plotting.py -> build/bdist.linux-armv7l/wheel/./nuxl_rescore 2025-12-30T00:35:26,711 copying build/lib/nuxl_rescore/entrapment.py -> build/bdist.linux-armv7l/wheel/./nuxl_rescore 2025-12-30T00:35:26,713 copying build/lib/nuxl_rescore/run.py -> build/bdist.linux-armv7l/wheel/./nuxl_rescore 2025-12-30T00:35:26,716 copying build/lib/nuxl_rescore/cli.py -> build/bdist.linux-armv7l/wheel/./nuxl_rescore 2025-12-30T00:35:26,718 copying build/lib/nuxl_rescore/ms2pip_features.py -> build/bdist.linux-armv7l/wheel/./nuxl_rescore 2025-12-30T00:35:26,720 copying build/lib/nuxl_rescore/NA_Encoding.py -> build/bdist.linux-armv7l/wheel/./nuxl_rescore 2025-12-30T00:35:26,723 running install_egg_info 2025-12-30T00:35:26,729 Copying nuxl_rescore.egg-info to build/bdist.linux-armv7l/wheel/./nuxl_rescore-0.2.0-py3.11.egg-info 2025-12-30T00:35:26,742 running install_scripts 2025-12-30T00:35:26,755 creating build/bdist.linux-armv7l/wheel/nuxl_rescore-0.2.0.dist-info/WHEEL 2025-12-30T00:35:26,758 creating '/tmp/pip-wheel-qkgj0jnv/.tmp-2u09g5v1/nuxl_rescore-0.2.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-12-30T00:35:26,762 adding 'nuxl_rescore/Data_parser.py' 2025-12-30T00:35:26,764 adding 'nuxl_rescore/FDR_calculation.py' 2025-12-30T00:35:26,766 adding 'nuxl_rescore/NA_Encoding.py' 2025-12-30T00:35:26,767 adding 'nuxl_rescore/RT_features.py' 2025-12-30T00:35:26,768 adding 'nuxl_rescore/__init__.py' 2025-12-30T00:35:26,770 adding 'nuxl_rescore/cli.py' 2025-12-30T00:35:26,771 adding 'nuxl_rescore/entrapment.py' 2025-12-30T00:35:26,773 adding 'nuxl_rescore/idXML2df.py' 2025-12-30T00:35:26,774 adding 'nuxl_rescore/main.py' 2025-12-30T00:35:26,775 adding 'nuxl_rescore/ms2pip_features.py' 2025-12-30T00:35:26,778 adding 'nuxl_rescore/plotting.py' 2025-12-30T00:35:26,779 adding 'nuxl_rescore/run.py' 2025-12-30T00:35:26,783 adding 'nuxl_rescore-0.2.0.dist-info/licenses/LICENSE' 2025-12-30T00:35:26,786 adding 'nuxl_rescore-0.2.0.dist-info/METADATA' 2025-12-30T00:35:26,787 adding 'nuxl_rescore-0.2.0.dist-info/WHEEL' 2025-12-30T00:35:26,788 adding 'nuxl_rescore-0.2.0.dist-info/entry_points.txt' 2025-12-30T00:35:26,789 adding 'nuxl_rescore-0.2.0.dist-info/top_level.txt' 2025-12-30T00:35:26,790 adding 'nuxl_rescore-0.2.0.dist-info/RECORD' 2025-12-30T00:35:26,792 removing build/bdist.linux-armv7l/wheel 2025-12-30T00:35:26,896 Building wheel for nuxl-rescore (pyproject.toml): finished with status 'done' 2025-12-30T00:35:26,901 Created wheel for nuxl-rescore: filename=nuxl_rescore-0.2.0-py3-none-any.whl size=35737 sha256=403f30640dfe3ee0a31fa738230fd9a6765b14090674a7eea8a66064370c1d54 2025-12-30T00:35:26,902 Stored in directory: /tmp/pip-ephem-wheel-cache-dlhorccr/wheels/56/4c/1b/c159e24d2e137bcbd702ffb650e9a3dabb97be2af4c83309c1 2025-12-30T00:35:26,921 Successfully built nuxl-rescore 2025-12-30T00:35:26,925 Removed build tracker: '/tmp/pip-build-tracker-6jrcrc9_'