2026-02-08T20:21:16,247 Created temporary directory: /tmp/pip-ephem-wheel-cache-xcqkdkdx 2026-02-08T20:21:16,249 Created temporary directory: /tmp/pip-build-tracker-k116r3ar 2026-02-08T20:21:16,249 Initialized build tracking at /tmp/pip-build-tracker-k116r3ar 2026-02-08T20:21:16,250 Created build tracker: /tmp/pip-build-tracker-k116r3ar 2026-02-08T20:21:16,250 Entered build tracker: /tmp/pip-build-tracker-k116r3ar 2026-02-08T20:21:16,251 Created temporary directory: /tmp/pip-wheel-trez6lz9 2026-02-08T20:21:16,254 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-02-08T20:21:16,257 Created temporary directory: /tmp/pip-ephem-wheel-cache-n6dt5j43 2026-02-08T20:21:16,278 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-02-08T20:21:16,282 2 location(s) to search for versions of biolink-helper-pkg: 2026-02-08T20:21:16,282 * https://pypi.org/simple/biolink-helper-pkg/ 2026-02-08T20:21:16,282 * https://www.piwheels.org/simple/biolink-helper-pkg/ 2026-02-08T20:21:16,283 Fetching project page and analyzing links: https://pypi.org/simple/biolink-helper-pkg/ 2026-02-08T20:21:16,283 Getting page https://pypi.org/simple/biolink-helper-pkg/ 2026-02-08T20:21:16,285 Found index url https://pypi.org/simple 2026-02-08T20:21:16,501 Fetched page https://pypi.org/simple/biolink-helper-pkg/ as application/vnd.pypi.simple.v1+json 2026-02-08T20:21:16,504 Skipping link: No binaries permitted for biolink-helper-pkg: https://files.pythonhosted.org/packages/ea/8c/51a354e983f7d0aa0815bbafcccc3d3832cfbcdc72164da7a0ae85102506/biolink_helper_pkg-0.1.0-py3-none-any.whl (from https://pypi.org/simple/biolink-helper-pkg/) (requires-python:>=3.8) 2026-02-08T20:21:16,505 Found link https://files.pythonhosted.org/packages/64/87/34a270e55c619e08260bad5660a25400cd301b837df797b823931690c414/biolink_helper_pkg-0.1.0.tar.gz (from https://pypi.org/simple/biolink-helper-pkg/) (requires-python:>=3.8), version: 0.1.0 2026-02-08T20:21:16,506 Skipping link: No binaries permitted for biolink-helper-pkg: https://files.pythonhosted.org/packages/5c/29/aac048720d938b16f00db0a90ece19f1593afe23eb02d7c027dcc73a3aa4/biolink_helper_pkg-0.2.0-py3-none-any.whl (from https://pypi.org/simple/biolink-helper-pkg/) (requires-python:>=3.8) 2026-02-08T20:21:16,507 Found link https://files.pythonhosted.org/packages/03/68/d33f85bc23a43618e6f16568d941287ccef08fcd4b368b45d77a3936208b/biolink_helper_pkg-0.2.0.tar.gz (from https://pypi.org/simple/biolink-helper-pkg/) (requires-python:>=3.8), version: 0.2.0 2026-02-08T20:21:16,508 Skipping link: No binaries permitted for biolink-helper-pkg: https://files.pythonhosted.org/packages/ac/a6/5f287607387ecb6eaf1381ff96743b8281c08031b84183f389aa784876c2/biolink_helper_pkg-0.3.0-py3-none-any.whl (from https://pypi.org/simple/biolink-helper-pkg/) (requires-python:>=3.8) 2026-02-08T20:21:16,509 Found link https://files.pythonhosted.org/packages/9a/32/dadadb298da43605d140782734ca73261a63852b8a76ac4b8ad3f08a019c/biolink_helper_pkg-0.3.0.tar.gz (from https://pypi.org/simple/biolink-helper-pkg/) (requires-python:>=3.8), version: 0.3.0 2026-02-08T20:21:16,509 Skipping link: No binaries permitted for biolink-helper-pkg: https://files.pythonhosted.org/packages/79/58/e4596cd38345efa70e0486356a08b5c227edd99664033a284285919674cc/biolink_helper_pkg-1.0.0-py3-none-any.whl (from https://pypi.org/simple/biolink-helper-pkg/) (requires-python:>=3.8) 2026-02-08T20:21:16,510 Found link https://files.pythonhosted.org/packages/bd/f3/961c952f48589c72e2aea0794eb8b2f4bbe32426100127d87c69da75802d/biolink_helper_pkg-1.0.0.tar.gz (from https://pypi.org/simple/biolink-helper-pkg/) (requires-python:>=3.8), version: 1.0.0 2026-02-08T20:21:16,511 Fetching project page and analyzing links: https://www.piwheels.org/simple/biolink-helper-pkg/ 2026-02-08T20:21:16,512 Getting page https://www.piwheels.org/simple/biolink-helper-pkg/ 2026-02-08T20:21:16,514 Found index url https://www.piwheels.org/simple 2026-02-08T20:21:16,670 Fetched page https://www.piwheels.org/simple/biolink-helper-pkg/ as text/html 2026-02-08T20:21:16,672 Skipping link: not a file: https://www.piwheels.org/simple/biolink-helper-pkg/ 2026-02-08T20:21:16,672 Skipping link: not a file: https://pypi.org/simple/biolink-helper-pkg/ 2026-02-08T20:21:16,691 Given no hashes to check 1 links for project 'biolink-helper-pkg': discarding no candidates 2026-02-08T20:21:16,709 Collecting biolink-helper-pkg==0.1.0 2026-02-08T20:21:16,711 Created temporary directory: /tmp/pip-unpack-cksbrdnn 2026-02-08T20:21:16,921 Downloading biolink_helper_pkg-0.1.0.tar.gz (9.7 kB) 2026-02-08T20:21:16,949 Added biolink-helper-pkg==0.1.0 from https://files.pythonhosted.org/packages/64/87/34a270e55c619e08260bad5660a25400cd301b837df797b823931690c414/biolink_helper_pkg-0.1.0.tar.gz to build tracker '/tmp/pip-build-tracker-k116r3ar' 2026-02-08T20:21:16,954 Created temporary directory: /tmp/pip-build-env-e_2gtjax 2026-02-08T20:21:16,958 Installing build dependencies: started 2026-02-08T20:21:16,959 Running command pip subprocess to install build dependencies 2026-02-08T20:21:18,113 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-02-08T20:21:18,724 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-02-08T20:21:18,747 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-02-08T20:21:20,511 Collecting setuptools>=61.0 2026-02-08T20:21:20,530 Using cached setuptools-82.0.0-py3-none-any.whl (1.0 MB) 2026-02-08T20:21:20,791 Collecting wheel 2026-02-08T20:21:20,796 Using cached wheel-0.46.3-py3-none-any.whl (30 kB) 2026-02-08T20:21:20,978 Collecting packaging>=24.0 2026-02-08T20:21:20,983 Using cached packaging-26.0-py3-none-any.whl (74 kB) 2026-02-08T20:21:23,992 Installing collected packages: setuptools, packaging, wheel 2026-02-08T20:21:27,472 Creating /tmp/pip-build-env-e_2gtjax/overlay/local/bin 2026-02-08T20:21:27,474 changing mode of /tmp/pip-build-env-e_2gtjax/overlay/local/bin/wheel to 755 2026-02-08T20:21:27,496 Successfully installed packaging-26.0 setuptools-82.0.0 wheel-0.46.3 2026-02-08T20:21:27,804 Installing build dependencies: finished with status 'done' 2026-02-08T20:21:27,810 Getting requirements to build wheel: started 2026-02-08T20:21:27,811 Running command Getting requirements to build wheel 2026-02-08T20:21:28,409 /tmp/pip-build-env-e_2gtjax/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-02-08T20:21:28,409 !! 2026-02-08T20:21:28,411 ******************************************************************************** 2026-02-08T20:21:28,411 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-02-08T20:21:28,413 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-02-08T20:21:28,413 or your builds will no longer be supported. 2026-02-08T20:21:28,414 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-02-08T20:21:28,415 ******************************************************************************** 2026-02-08T20:21:28,416 !! 2026-02-08T20:21:28,417 corresp(dist, value, root_dir) 2026-02-08T20:21:28,418 /tmp/pip-build-env-e_2gtjax/overlay/local/lib/python3.11/dist-packages/setuptools/config/expand.py:126: SetuptoolsWarning: File '/tmp/pip-wheel-trez6lz9/biolink-helper-pkg_96cc1c7edd9e4a4a80d4e33bc4f9ea5e/LICENSE' cannot be found 2026-02-08T20:21:28,419 return '\n'.join( 2026-02-08T20:21:28,513 running egg_info 2026-02-08T20:21:28,519 writing biolink_helper_pkg.egg-info/PKG-INFO 2026-02-08T20:21:28,523 writing dependency_links to biolink_helper_pkg.egg-info/dependency_links.txt 2026-02-08T20:21:28,525 writing requirements to biolink_helper_pkg.egg-info/requires.txt 2026-02-08T20:21:28,526 writing top-level names to biolink_helper_pkg.egg-info/top_level.txt 2026-02-08T20:21:28,545 reading manifest file 'biolink_helper_pkg.egg-info/SOURCES.txt' 2026-02-08T20:21:28,550 writing manifest file 'biolink_helper_pkg.egg-info/SOURCES.txt' 2026-02-08T20:21:28,651 Getting requirements to build wheel: finished with status 'done' 2026-02-08T20:21:28,654 Created temporary directory: /tmp/pip-modern-metadata-i8la9l_z 2026-02-08T20:21:28,657 Preparing metadata (pyproject.toml): started 2026-02-08T20:21:28,658 Running command Preparing metadata (pyproject.toml) 2026-02-08T20:21:29,225 /tmp/pip-build-env-e_2gtjax/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-02-08T20:21:29,225 !! 2026-02-08T20:21:29,226 ******************************************************************************** 2026-02-08T20:21:29,227 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-02-08T20:21:29,228 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-02-08T20:21:29,228 or your builds will no longer be supported. 2026-02-08T20:21:29,230 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-02-08T20:21:29,230 ******************************************************************************** 2026-02-08T20:21:29,232 !! 2026-02-08T20:21:29,232 corresp(dist, value, root_dir) 2026-02-08T20:21:29,233 /tmp/pip-build-env-e_2gtjax/overlay/local/lib/python3.11/dist-packages/setuptools/config/expand.py:126: SetuptoolsWarning: File '/tmp/pip-wheel-trez6lz9/biolink-helper-pkg_96cc1c7edd9e4a4a80d4e33bc4f9ea5e/LICENSE' cannot be found 2026-02-08T20:21:29,234 return '\n'.join( 2026-02-08T20:21:29,328 running dist_info 2026-02-08T20:21:29,338 creating /tmp/pip-modern-metadata-i8la9l_z/biolink_helper_pkg.egg-info 2026-02-08T20:21:29,339 writing /tmp/pip-modern-metadata-i8la9l_z/biolink_helper_pkg.egg-info/PKG-INFO 2026-02-08T20:21:29,343 writing dependency_links to /tmp/pip-modern-metadata-i8la9l_z/biolink_helper_pkg.egg-info/dependency_links.txt 2026-02-08T20:21:29,345 writing requirements to /tmp/pip-modern-metadata-i8la9l_z/biolink_helper_pkg.egg-info/requires.txt 2026-02-08T20:21:29,346 writing top-level names to /tmp/pip-modern-metadata-i8la9l_z/biolink_helper_pkg.egg-info/top_level.txt 2026-02-08T20:21:29,347 writing manifest file '/tmp/pip-modern-metadata-i8la9l_z/biolink_helper_pkg.egg-info/SOURCES.txt' 2026-02-08T20:21:29,364 reading manifest file '/tmp/pip-modern-metadata-i8la9l_z/biolink_helper_pkg.egg-info/SOURCES.txt' 2026-02-08T20:21:29,369 writing manifest file '/tmp/pip-modern-metadata-i8la9l_z/biolink_helper_pkg.egg-info/SOURCES.txt' 2026-02-08T20:21:29,370 creating '/tmp/pip-modern-metadata-i8la9l_z/biolink_helper_pkg-0.1.0.dist-info' 2026-02-08T20:21:29,494 Preparing metadata (pyproject.toml): finished with status 'done' 2026-02-08T20:21:29,499 Source in /tmp/pip-wheel-trez6lz9/biolink-helper-pkg_96cc1c7edd9e4a4a80d4e33bc4f9ea5e has version 0.1.0, which satisfies requirement biolink-helper-pkg==0.1.0 from https://files.pythonhosted.org/packages/64/87/34a270e55c619e08260bad5660a25400cd301b837df797b823931690c414/biolink_helper_pkg-0.1.0.tar.gz 2026-02-08T20:21:29,500 Removed biolink-helper-pkg==0.1.0 from https://files.pythonhosted.org/packages/64/87/34a270e55c619e08260bad5660a25400cd301b837df797b823931690c414/biolink_helper_pkg-0.1.0.tar.gz from build tracker '/tmp/pip-build-tracker-k116r3ar' 2026-02-08T20:21:29,505 Created temporary directory: /tmp/pip-unpack-o_rrolla 2026-02-08T20:21:29,506 Building wheels for collected packages: biolink-helper-pkg 2026-02-08T20:21:29,510 Created temporary directory: /tmp/pip-wheel-aj1ktckj 2026-02-08T20:21:29,510 Destination directory: /tmp/pip-wheel-aj1ktckj 2026-02-08T20:21:29,512 Building wheel for biolink-helper-pkg (pyproject.toml): started 2026-02-08T20:21:29,513 Running command Building wheel for biolink-helper-pkg (pyproject.toml) 2026-02-08T20:21:30,063 /tmp/pip-build-env-e_2gtjax/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-02-08T20:21:30,064 !! 2026-02-08T20:21:30,065 ******************************************************************************** 2026-02-08T20:21:30,065 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-02-08T20:21:30,066 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-02-08T20:21:30,067 or your builds will no longer be supported. 2026-02-08T20:21:30,068 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-02-08T20:21:30,068 ******************************************************************************** 2026-02-08T20:21:30,069 !! 2026-02-08T20:21:30,070 corresp(dist, value, root_dir) 2026-02-08T20:21:30,070 /tmp/pip-build-env-e_2gtjax/overlay/local/lib/python3.11/dist-packages/setuptools/config/expand.py:126: SetuptoolsWarning: File '/tmp/pip-wheel-trez6lz9/biolink-helper-pkg_96cc1c7edd9e4a4a80d4e33bc4f9ea5e/LICENSE' cannot be found 2026-02-08T20:21:30,071 return '\n'.join( 2026-02-08T20:21:30,150 running bdist_wheel 2026-02-08T20:21:30,168 running build 2026-02-08T20:21:30,168 running build_py 2026-02-08T20:21:30,174 creating build/lib/biolink_helper_pkg 2026-02-08T20:21:30,176 copying biolink_helper_pkg/__init__.py -> build/lib/biolink_helper_pkg 2026-02-08T20:21:30,178 copying biolink_helper_pkg/biolink_helper.py -> build/lib/biolink_helper_pkg 2026-02-08T20:21:30,180 running egg_info 2026-02-08T20:21:30,190 writing biolink_helper_pkg.egg-info/PKG-INFO 2026-02-08T20:21:30,192 writing dependency_links to biolink_helper_pkg.egg-info/dependency_links.txt 2026-02-08T20:21:30,194 writing requirements to biolink_helper_pkg.egg-info/requires.txt 2026-02-08T20:21:30,195 writing top-level names to biolink_helper_pkg.egg-info/top_level.txt 2026-02-08T20:21:30,203 reading manifest file 'biolink_helper_pkg.egg-info/SOURCES.txt' 2026-02-08T20:21:30,207 writing manifest file 'biolink_helper_pkg.egg-info/SOURCES.txt' 2026-02-08T20:21:30,218 installing to build/bdist.linux-armv7l/wheel 2026-02-08T20:21:30,219 running install 2026-02-08T20:21:30,243 running install_lib 2026-02-08T20:21:30,248 creating build/bdist.linux-armv7l/wheel 2026-02-08T20:21:30,250 creating build/bdist.linux-armv7l/wheel/biolink_helper_pkg 2026-02-08T20:21:30,252 copying build/lib/biolink_helper_pkg/__init__.py -> build/bdist.linux-armv7l/wheel/./biolink_helper_pkg 2026-02-08T20:21:30,253 copying build/lib/biolink_helper_pkg/biolink_helper.py -> build/bdist.linux-armv7l/wheel/./biolink_helper_pkg 2026-02-08T20:21:30,256 running install_egg_info 2026-02-08T20:21:30,261 Copying biolink_helper_pkg.egg-info to build/bdist.linux-armv7l/wheel/./biolink_helper_pkg-0.1.0-py3.11.egg-info 2026-02-08T20:21:30,270 running install_scripts 2026-02-08T20:21:30,277 creating build/bdist.linux-armv7l/wheel/biolink_helper_pkg-0.1.0.dist-info/WHEEL 2026-02-08T20:21:30,280 creating '/tmp/pip-wheel-aj1ktckj/.tmp-3cc6b5mm/biolink_helper_pkg-0.1.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-02-08T20:21:30,282 adding 'biolink_helper_pkg/__init__.py' 2026-02-08T20:21:30,285 adding 'biolink_helper_pkg/biolink_helper.py' 2026-02-08T20:21:30,287 adding 'biolink_helper_pkg-0.1.0.dist-info/METADATA' 2026-02-08T20:21:30,288 adding 'biolink_helper_pkg-0.1.0.dist-info/WHEEL' 2026-02-08T20:21:30,289 adding 'biolink_helper_pkg-0.1.0.dist-info/top_level.txt' 2026-02-08T20:21:30,290 adding 'biolink_helper_pkg-0.1.0.dist-info/RECORD' 2026-02-08T20:21:30,291 removing build/bdist.linux-armv7l/wheel 2026-02-08T20:21:30,395 Building wheel for biolink-helper-pkg (pyproject.toml): finished with status 'done' 2026-02-08T20:21:30,399 Created wheel for biolink-helper-pkg: filename=biolink_helper_pkg-0.1.0-py3-none-any.whl size=9101 sha256=2f94451dd415a5f129dc0854994f3d082d67be7a81ced3d8d81057612d1d97ae 2026-02-08T20:21:30,400 Stored in directory: /tmp/pip-ephem-wheel-cache-n6dt5j43/wheels/4b/01/4d/34735452e3ace8885e43f535df2bb04406d1d03ef1d2a78336 2026-02-08T20:21:30,409 Successfully built biolink-helper-pkg 2026-02-08T20:21:30,413 Removed build tracker: '/tmp/pip-build-tracker-k116r3ar'