2026-02-08T22:19:53,801 Created temporary directory: /tmp/pip-ephem-wheel-cache-ozcjgwab 2026-02-08T22:19:53,802 Created temporary directory: /tmp/pip-build-tracker-ob8ruqvf 2026-02-08T22:19:53,803 Initialized build tracking at /tmp/pip-build-tracker-ob8ruqvf 2026-02-08T22:19:53,803 Created build tracker: /tmp/pip-build-tracker-ob8ruqvf 2026-02-08T22:19:53,804 Entered build tracker: /tmp/pip-build-tracker-ob8ruqvf 2026-02-08T22:19:53,805 Created temporary directory: /tmp/pip-wheel-87pjnjtv 2026-02-08T22:19:53,808 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-02-08T22:19:53,810 Created temporary directory: /tmp/pip-ephem-wheel-cache-_ttofrqq 2026-02-08T22:19:53,832 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-02-08T22:19:53,835 2 location(s) to search for versions of biolink-helper-pkg: 2026-02-08T22:19:53,835 * https://pypi.org/simple/biolink-helper-pkg/ 2026-02-08T22:19:53,835 * https://www.piwheels.org/simple/biolink-helper-pkg/ 2026-02-08T22:19:53,836 Fetching project page and analyzing links: https://pypi.org/simple/biolink-helper-pkg/ 2026-02-08T22:19:53,837 Getting page https://pypi.org/simple/biolink-helper-pkg/ 2026-02-08T22:19:53,838 Found index url https://pypi.org/simple 2026-02-08T22:19:54,119 Fetched page https://pypi.org/simple/biolink-helper-pkg/ as application/vnd.pypi.simple.v1+json 2026-02-08T22:19:54,122 Skipping link: No binaries permitted for biolink-helper-pkg: https://files.pythonhosted.org/packages/ea/8c/51a354e983f7d0aa0815bbafcccc3d3832cfbcdc72164da7a0ae85102506/biolink_helper_pkg-0.1.0-py3-none-any.whl (from https://pypi.org/simple/biolink-helper-pkg/) (requires-python:>=3.8) 2026-02-08T22:19:54,123 Found link https://files.pythonhosted.org/packages/64/87/34a270e55c619e08260bad5660a25400cd301b837df797b823931690c414/biolink_helper_pkg-0.1.0.tar.gz (from https://pypi.org/simple/biolink-helper-pkg/) (requires-python:>=3.8), version: 0.1.0 2026-02-08T22:19:54,124 Skipping link: No binaries permitted for biolink-helper-pkg: https://files.pythonhosted.org/packages/5c/29/aac048720d938b16f00db0a90ece19f1593afe23eb02d7c027dcc73a3aa4/biolink_helper_pkg-0.2.0-py3-none-any.whl (from https://pypi.org/simple/biolink-helper-pkg/) (requires-python:>=3.8) 2026-02-08T22:19:54,125 Found link https://files.pythonhosted.org/packages/03/68/d33f85bc23a43618e6f16568d941287ccef08fcd4b368b45d77a3936208b/biolink_helper_pkg-0.2.0.tar.gz (from https://pypi.org/simple/biolink-helper-pkg/) (requires-python:>=3.8), version: 0.2.0 2026-02-08T22:19:54,126 Skipping link: No binaries permitted for biolink-helper-pkg: https://files.pythonhosted.org/packages/ac/a6/5f287607387ecb6eaf1381ff96743b8281c08031b84183f389aa784876c2/biolink_helper_pkg-0.3.0-py3-none-any.whl (from https://pypi.org/simple/biolink-helper-pkg/) (requires-python:>=3.8) 2026-02-08T22:19:54,127 Found link https://files.pythonhosted.org/packages/9a/32/dadadb298da43605d140782734ca73261a63852b8a76ac4b8ad3f08a019c/biolink_helper_pkg-0.3.0.tar.gz (from https://pypi.org/simple/biolink-helper-pkg/) (requires-python:>=3.8), version: 0.3.0 2026-02-08T22:19:54,127 Skipping link: No binaries permitted for biolink-helper-pkg: https://files.pythonhosted.org/packages/79/58/e4596cd38345efa70e0486356a08b5c227edd99664033a284285919674cc/biolink_helper_pkg-1.0.0-py3-none-any.whl (from https://pypi.org/simple/biolink-helper-pkg/) (requires-python:>=3.8) 2026-02-08T22:19:54,128 Found link https://files.pythonhosted.org/packages/bd/f3/961c952f48589c72e2aea0794eb8b2f4bbe32426100127d87c69da75802d/biolink_helper_pkg-1.0.0.tar.gz (from https://pypi.org/simple/biolink-helper-pkg/) (requires-python:>=3.8), version: 1.0.0 2026-02-08T22:19:54,129 Fetching project page and analyzing links: https://www.piwheels.org/simple/biolink-helper-pkg/ 2026-02-08T22:19:54,130 Getting page https://www.piwheels.org/simple/biolink-helper-pkg/ 2026-02-08T22:19:54,132 Found index url https://www.piwheels.org/simple 2026-02-08T22:19:54,290 Fetched page https://www.piwheels.org/simple/biolink-helper-pkg/ as text/html 2026-02-08T22:19:54,292 Skipping link: No binaries permitted for biolink-helper-pkg: https://www.piwheels.org/simple/biolink-helper-pkg/biolink_helper_pkg-0.1.0-py3-none-any.whl#sha256=2f94451dd415a5f129dc0854994f3d082d67be7a81ced3d8d81057612d1d97ae (from https://www.piwheels.org/simple/biolink-helper-pkg/) (requires-python:>=3.8) 2026-02-08T22:19:54,292 Skipping link: not a file: https://www.piwheels.org/simple/biolink-helper-pkg/ 2026-02-08T22:19:54,293 Skipping link: not a file: https://pypi.org/simple/biolink-helper-pkg/ 2026-02-08T22:19:54,312 Given no hashes to check 1 links for project 'biolink-helper-pkg': discarding no candidates 2026-02-08T22:19:54,330 Collecting biolink-helper-pkg==0.2.0 2026-02-08T22:19:54,332 Created temporary directory: /tmp/pip-unpack-jb9efb7r 2026-02-08T22:19:54,540 Downloading biolink_helper_pkg-0.2.0.tar.gz (8.9 kB) 2026-02-08T22:19:54,572 Added biolink-helper-pkg==0.2.0 from https://files.pythonhosted.org/packages/03/68/d33f85bc23a43618e6f16568d941287ccef08fcd4b368b45d77a3936208b/biolink_helper_pkg-0.2.0.tar.gz to build tracker '/tmp/pip-build-tracker-ob8ruqvf' 2026-02-08T22:19:54,577 Created temporary directory: /tmp/pip-build-env-zsw77t9j 2026-02-08T22:19:54,581 Installing build dependencies: started 2026-02-08T22:19:54,582 Running command pip subprocess to install build dependencies 2026-02-08T22:19:55,711 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-02-08T22:19:56,330 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-02-08T22:19:56,353 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-02-08T22:19:58,115 Collecting setuptools>=61.0 2026-02-08T22:19:58,135 Using cached setuptools-82.0.0-py3-none-any.whl (1.0 MB) 2026-02-08T22:19:58,399 Collecting wheel 2026-02-08T22:19:58,404 Using cached wheel-0.46.3-py3-none-any.whl (30 kB) 2026-02-08T22:19:58,591 Collecting packaging>=24.0 2026-02-08T22:19:58,597 Using cached packaging-26.0-py3-none-any.whl (74 kB) 2026-02-08T22:20:01,817 Installing collected packages: setuptools, packaging, wheel 2026-02-08T22:20:05,794 Creating /tmp/pip-build-env-zsw77t9j/overlay/local/bin 2026-02-08T22:20:05,796 changing mode of /tmp/pip-build-env-zsw77t9j/overlay/local/bin/wheel to 755 2026-02-08T22:20:05,816 Successfully installed packaging-26.0 setuptools-82.0.0 wheel-0.46.3 2026-02-08T22:20:06,121 Installing build dependencies: finished with status 'done' 2026-02-08T22:20:06,128 Getting requirements to build wheel: started 2026-02-08T22:20:06,129 Running command Getting requirements to build wheel 2026-02-08T22:20:06,722 /tmp/pip-build-env-zsw77t9j/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-02-08T22:20:06,723 !! 2026-02-08T22:20:06,724 ******************************************************************************** 2026-02-08T22:20:06,724 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-02-08T22:20:06,726 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-02-08T22:20:06,726 or your builds will no longer be supported. 2026-02-08T22:20:06,728 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-02-08T22:20:06,728 ******************************************************************************** 2026-02-08T22:20:06,729 !! 2026-02-08T22:20:06,729 corresp(dist, value, root_dir) 2026-02-08T22:20:06,730 /tmp/pip-build-env-zsw77t9j/overlay/local/lib/python3.11/dist-packages/setuptools/config/expand.py:126: SetuptoolsWarning: File '/tmp/pip-wheel-87pjnjtv/biolink-helper-pkg_f0be34d3f16f42bca0af52e57dc39bf8/LICENSE' cannot be found 2026-02-08T22:20:06,730 return '\n'.join( 2026-02-08T22:20:06,825 running egg_info 2026-02-08T22:20:06,831 writing biolink_helper_pkg.egg-info/PKG-INFO 2026-02-08T22:20:06,834 writing dependency_links to biolink_helper_pkg.egg-info/dependency_links.txt 2026-02-08T22:20:06,836 writing requirements to biolink_helper_pkg.egg-info/requires.txt 2026-02-08T22:20:06,838 writing top-level names to biolink_helper_pkg.egg-info/top_level.txt 2026-02-08T22:20:06,856 reading manifest file 'biolink_helper_pkg.egg-info/SOURCES.txt' 2026-02-08T22:20:06,861 writing manifest file 'biolink_helper_pkg.egg-info/SOURCES.txt' 2026-02-08T22:20:06,960 Getting requirements to build wheel: finished with status 'done' 2026-02-08T22:20:06,963 Created temporary directory: /tmp/pip-modern-metadata-bthejjbl 2026-02-08T22:20:06,966 Preparing metadata (pyproject.toml): started 2026-02-08T22:20:06,967 Running command Preparing metadata (pyproject.toml) 2026-02-08T22:20:07,525 /tmp/pip-build-env-zsw77t9j/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-02-08T22:20:07,525 !! 2026-02-08T22:20:07,527 ******************************************************************************** 2026-02-08T22:20:07,527 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-02-08T22:20:07,528 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-02-08T22:20:07,529 or your builds will no longer be supported. 2026-02-08T22:20:07,530 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-02-08T22:20:07,531 ******************************************************************************** 2026-02-08T22:20:07,532 !! 2026-02-08T22:20:07,533 corresp(dist, value, root_dir) 2026-02-08T22:20:07,533 /tmp/pip-build-env-zsw77t9j/overlay/local/lib/python3.11/dist-packages/setuptools/config/expand.py:126: SetuptoolsWarning: File '/tmp/pip-wheel-87pjnjtv/biolink-helper-pkg_f0be34d3f16f42bca0af52e57dc39bf8/LICENSE' cannot be found 2026-02-08T22:20:07,534 return '\n'.join( 2026-02-08T22:20:07,625 running dist_info 2026-02-08T22:20:07,636 creating /tmp/pip-modern-metadata-bthejjbl/biolink_helper_pkg.egg-info 2026-02-08T22:20:07,637 writing /tmp/pip-modern-metadata-bthejjbl/biolink_helper_pkg.egg-info/PKG-INFO 2026-02-08T22:20:07,857 writing dependency_links to /tmp/pip-modern-metadata-bthejjbl/biolink_helper_pkg.egg-info/dependency_links.txt 2026-02-08T22:20:07,859 writing requirements to /tmp/pip-modern-metadata-bthejjbl/biolink_helper_pkg.egg-info/requires.txt 2026-02-08T22:20:07,860 writing top-level names to /tmp/pip-modern-metadata-bthejjbl/biolink_helper_pkg.egg-info/top_level.txt 2026-02-08T22:20:07,861 writing manifest file '/tmp/pip-modern-metadata-bthejjbl/biolink_helper_pkg.egg-info/SOURCES.txt' 2026-02-08T22:20:07,878 reading manifest file '/tmp/pip-modern-metadata-bthejjbl/biolink_helper_pkg.egg-info/SOURCES.txt' 2026-02-08T22:20:07,882 writing manifest file '/tmp/pip-modern-metadata-bthejjbl/biolink_helper_pkg.egg-info/SOURCES.txt' 2026-02-08T22:20:07,883 creating '/tmp/pip-modern-metadata-bthejjbl/biolink_helper_pkg-0.2.0.dist-info' 2026-02-08T22:20:08,003 Preparing metadata (pyproject.toml): finished with status 'done' 2026-02-08T22:20:08,008 Source in /tmp/pip-wheel-87pjnjtv/biolink-helper-pkg_f0be34d3f16f42bca0af52e57dc39bf8 has version 0.2.0, which satisfies requirement biolink-helper-pkg==0.2.0 from https://files.pythonhosted.org/packages/03/68/d33f85bc23a43618e6f16568d941287ccef08fcd4b368b45d77a3936208b/biolink_helper_pkg-0.2.0.tar.gz 2026-02-08T22:20:08,009 Removed biolink-helper-pkg==0.2.0 from https://files.pythonhosted.org/packages/03/68/d33f85bc23a43618e6f16568d941287ccef08fcd4b368b45d77a3936208b/biolink_helper_pkg-0.2.0.tar.gz from build tracker '/tmp/pip-build-tracker-ob8ruqvf' 2026-02-08T22:20:08,014 Created temporary directory: /tmp/pip-unpack-tpxkmet9 2026-02-08T22:20:08,015 Building wheels for collected packages: biolink-helper-pkg 2026-02-08T22:20:08,019 Created temporary directory: /tmp/pip-wheel-l59l927z 2026-02-08T22:20:08,019 Destination directory: /tmp/pip-wheel-l59l927z 2026-02-08T22:20:08,021 Building wheel for biolink-helper-pkg (pyproject.toml): started 2026-02-08T22:20:08,022 Running command Building wheel for biolink-helper-pkg (pyproject.toml) 2026-02-08T22:20:08,563 /tmp/pip-build-env-zsw77t9j/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-02-08T22:20:08,563 !! 2026-02-08T22:20:08,564 ******************************************************************************** 2026-02-08T22:20:08,565 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-02-08T22:20:08,566 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-02-08T22:20:08,566 or your builds will no longer be supported. 2026-02-08T22:20:08,567 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-02-08T22:20:08,568 ******************************************************************************** 2026-02-08T22:20:08,569 !! 2026-02-08T22:20:08,570 corresp(dist, value, root_dir) 2026-02-08T22:20:08,571 /tmp/pip-build-env-zsw77t9j/overlay/local/lib/python3.11/dist-packages/setuptools/config/expand.py:126: SetuptoolsWarning: File '/tmp/pip-wheel-87pjnjtv/biolink-helper-pkg_f0be34d3f16f42bca0af52e57dc39bf8/LICENSE' cannot be found 2026-02-08T22:20:08,571 return '\n'.join( 2026-02-08T22:20:08,651 running bdist_wheel 2026-02-08T22:20:08,668 running build 2026-02-08T22:20:08,668 running build_py 2026-02-08T22:20:08,674 creating build/lib/biolink_helper_pkg 2026-02-08T22:20:08,676 copying biolink_helper_pkg/__init__.py -> build/lib/biolink_helper_pkg 2026-02-08T22:20:08,678 copying biolink_helper_pkg/biolink_helper.py -> build/lib/biolink_helper_pkg 2026-02-08T22:20:08,681 running egg_info 2026-02-08T22:20:08,690 writing biolink_helper_pkg.egg-info/PKG-INFO 2026-02-08T22:20:08,692 writing dependency_links to biolink_helper_pkg.egg-info/dependency_links.txt 2026-02-08T22:20:08,694 writing requirements to biolink_helper_pkg.egg-info/requires.txt 2026-02-08T22:20:08,695 writing top-level names to biolink_helper_pkg.egg-info/top_level.txt 2026-02-08T22:20:08,703 reading manifest file 'biolink_helper_pkg.egg-info/SOURCES.txt' 2026-02-08T22:20:08,707 writing manifest file 'biolink_helper_pkg.egg-info/SOURCES.txt' 2026-02-08T22:20:08,718 installing to build/bdist.linux-armv7l/wheel 2026-02-08T22:20:08,719 running install 2026-02-08T22:20:08,742 running install_lib 2026-02-08T22:20:08,748 creating build/bdist.linux-armv7l/wheel 2026-02-08T22:20:08,750 creating build/bdist.linux-armv7l/wheel/biolink_helper_pkg 2026-02-08T22:20:08,751 copying build/lib/biolink_helper_pkg/__init__.py -> build/bdist.linux-armv7l/wheel/./biolink_helper_pkg 2026-02-08T22:20:08,753 copying build/lib/biolink_helper_pkg/biolink_helper.py -> build/bdist.linux-armv7l/wheel/./biolink_helper_pkg 2026-02-08T22:20:08,755 running install_egg_info 2026-02-08T22:20:08,760 Copying biolink_helper_pkg.egg-info to build/bdist.linux-armv7l/wheel/./biolink_helper_pkg-0.2.0-py3.11.egg-info 2026-02-08T22:20:08,770 running install_scripts 2026-02-08T22:20:08,777 creating build/bdist.linux-armv7l/wheel/biolink_helper_pkg-0.2.0.dist-info/WHEEL 2026-02-08T22:20:08,779 creating '/tmp/pip-wheel-l59l927z/.tmp-qf4f6apl/biolink_helper_pkg-0.2.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-02-08T22:20:08,781 adding 'biolink_helper_pkg/__init__.py' 2026-02-08T22:20:08,785 adding 'biolink_helper_pkg/biolink_helper.py' 2026-02-08T22:20:08,787 adding 'biolink_helper_pkg-0.2.0.dist-info/METADATA' 2026-02-08T22:20:08,788 adding 'biolink_helper_pkg-0.2.0.dist-info/WHEEL' 2026-02-08T22:20:08,789 adding 'biolink_helper_pkg-0.2.0.dist-info/top_level.txt' 2026-02-08T22:20:08,790 adding 'biolink_helper_pkg-0.2.0.dist-info/RECORD' 2026-02-08T22:20:08,791 removing build/bdist.linux-armv7l/wheel 2026-02-08T22:20:08,894 Building wheel for biolink-helper-pkg (pyproject.toml): finished with status 'done' 2026-02-08T22:20:08,898 Created wheel for biolink-helper-pkg: filename=biolink_helper_pkg-0.2.0-py3-none-any.whl size=8350 sha256=88230eaf59cf2bfb6d52e18161bf2f05be70d20c05570f47a12886ae64b93b98 2026-02-08T22:20:08,899 Stored in directory: /tmp/pip-ephem-wheel-cache-_ttofrqq/wheels/e0/2f/8b/358fbbf47b2b95d64b4ad40ca873f738a41c7bcbf9e9876f64 2026-02-08T22:20:08,908 Successfully built biolink-helper-pkg 2026-02-08T22:20:08,911 Removed build tracker: '/tmp/pip-build-tracker-ob8ruqvf'