2026-02-09T00:53:18,902 Created temporary directory: /tmp/pip-ephem-wheel-cache-nefg72uv 2026-02-09T00:53:18,905 Created temporary directory: /tmp/pip-build-tracker-ljtvo9rz 2026-02-09T00:53:18,906 Initialized build tracking at /tmp/pip-build-tracker-ljtvo9rz 2026-02-09T00:53:18,907 Created build tracker: /tmp/pip-build-tracker-ljtvo9rz 2026-02-09T00:53:18,907 Entered build tracker: /tmp/pip-build-tracker-ljtvo9rz 2026-02-09T00:53:18,909 Created temporary directory: /tmp/pip-wheel-l5sm9x9c 2026-02-09T00:53:18,913 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. 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(from https://www.piwheels.org/simple/causal-testing-framework/) (requires-python:>=3.9) 2026-02-09T00:53:19,686 Skipping link: No binaries permitted for causal-testing-framework: https://archive1.piwheels.org/simple/causal-testing-framework/causal_testing_framework-4.0.0-py3-none-any.whl#sha256=bfd385f545761e43d6ff2d66ee400ae6964c86d31bf1230af02bf83339e67ff8 (from https://www.piwheels.org/simple/causal-testing-framework/) (requires-python:>=3.9) 2026-02-09T00:53:19,687 Skipping link: No binaries permitted for causal-testing-framework: https://archive1.piwheels.org/simple/causal-testing-framework/causal_testing_framework-3.2.0-py3-none-any.whl#sha256=deb3961cfc138927b02a65fca00d40852dc5514928845cbd071b35f9fc9308cc (from https://www.piwheels.org/simple/causal-testing-framework/) (requires-python:>=3.9) 2026-02-09T00:53:19,687 Skipping link: No binaries permitted for causal-testing-framework: 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2026-02-09T00:53:19,689 Skipping link: No binaries permitted for causal-testing-framework: https://archive1.piwheels.org/simple/causal-testing-framework/causal_testing_framework-2.0.7-py3-none-any.whl#sha256=8cd3ce0fd4621926ea10866b4b0b8b7e9bb6bb22f9e1b8fbc58da1841b693841 (from https://www.piwheels.org/simple/causal-testing-framework/) (requires-python:>=3.9) 2026-02-09T00:53:19,690 Skipping link: not a file: https://www.piwheels.org/simple/causal-testing-framework/ 2026-02-09T00:53:19,691 Skipping link: not a file: https://pypi.org/simple/causal-testing-framework/ 2026-02-09T00:53:19,721 Given no hashes to check 1 links for project 'causal-testing-framework': discarding no candidates 2026-02-09T00:53:19,744 Collecting causal-testing-framework==14.0.0 2026-02-09T00:53:19,747 Created temporary directory: /tmp/pip-unpack-jxb0wcbp 2026-02-09T00:53:20,109 Downloading causal_testing_framework-14.0.0.tar.gz (2.5 MB) 2026-02-09T00:53:21,508 Added causal-testing-framework==14.0.0 from https://files.pythonhosted.org/packages/a0/a9/495ec9248128c3b29cb4633bc86042c6cbf419cad9a846f1eb39806e8667/causal_testing_framework-14.0.0.tar.gz to build tracker '/tmp/pip-build-tracker-ljtvo9rz' 2026-02-09T00:53:21,517 Created temporary directory: /tmp/pip-build-env-4n_8hyma 2026-02-09T00:53:21,522 Installing build dependencies: started 2026-02-09T00:53:21,524 Running command pip subprocess to install build dependencies 2026-02-09T00:53:23,268 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-02-09T00:53:24,383 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-02-09T00:53:24,445 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-02-09T00:53:27,058 Collecting setuptools>=64 2026-02-09T00:53:27,081 Using cached setuptools-82.0.0-py3-none-any.whl (1.0 MB) 2026-02-09T00:53:27,677 Collecting setuptools_scm[toml]>=6.2 2026-02-09T00:53:27,698 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-9.2.2-py3-none-any.whl (62 kB) 2026-02-09T00:53:27,972 Collecting wheel 2026-02-09T00:53:27,979 Using cached wheel-0.46.3-py3-none-any.whl (30 kB) 2026-02-09T00:53:28,267 Collecting packaging>=20 2026-02-09T00:53:28,275 Using cached packaging-26.0-py3-none-any.whl (74 kB) 2026-02-09T00:53:32,925 Installing collected packages: setuptools, packaging, wheel, setuptools_scm 2026-02-09T00:53:37,379 Creating /tmp/pip-build-env-4n_8hyma/overlay/local/bin 2026-02-09T00:53:37,381 changing mode of /tmp/pip-build-env-4n_8hyma/overlay/local/bin/wheel to 755 2026-02-09T00:53:37,702 changing mode of /tmp/pip-build-env-4n_8hyma/overlay/local/bin/setuptools-scm to 755 2026-02-09T00:53:37,740 Successfully installed packaging-26.0 setuptools-82.0.0 setuptools_scm-9.2.2 wheel-0.46.3 2026-02-09T00:53:38,208 Installing build dependencies: finished with status 'done' 2026-02-09T00:53:38,217 Getting requirements to build wheel: started 2026-02-09T00:53:38,218 Running command Getting requirements to build wheel 2026-02-09T00:53:39,268 /tmp/pip-build-env-4n_8hyma/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-02-09T00:53:39,269 !! 2026-02-09T00:53:39,270 ******************************************************************************** 2026-02-09T00:53:39,271 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-02-09T00:53:39,272 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-02-09T00:53:39,273 or your builds will no longer be supported. 2026-02-09T00:53:39,275 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-02-09T00:53:39,275 ******************************************************************************** 2026-02-09T00:53:39,277 !! 2026-02-09T00:53:39,278 corresp(dist, value, root_dir) 2026-02-09T00:53:39,378 running egg_info 2026-02-09T00:53:39,386 writing causal_testing_framework.egg-info/PKG-INFO 2026-02-09T00:53:39,395 writing dependency_links to causal_testing_framework.egg-info/dependency_links.txt 2026-02-09T00:53:39,400 writing requirements to causal_testing_framework.egg-info/requires.txt 2026-02-09T00:53:39,402 writing top-level names to causal_testing_framework.egg-info/top_level.txt 2026-02-09T00:53:39,528 listing git files failed - pretending there aren't any 2026-02-09T00:53:39,534 reading manifest file 'causal_testing_framework.egg-info/SOURCES.txt' 2026-02-09T00:53:39,640 adding license file 'LICENSE' 2026-02-09T00:53:39,719 writing manifest file 'causal_testing_framework.egg-info/SOURCES.txt' 2026-02-09T00:53:39,852 Getting requirements to build wheel: finished with status 'done' 2026-02-09T00:53:39,856 Created temporary directory: /tmp/pip-modern-metadata-50j_n_ac 2026-02-09T00:53:39,859 Preparing metadata (pyproject.toml): started 2026-02-09T00:53:39,860 Running command Preparing metadata (pyproject.toml) 2026-02-09T00:53:41,054 /tmp/pip-build-env-4n_8hyma/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-02-09T00:53:41,054 !! 2026-02-09T00:53:41,055 ******************************************************************************** 2026-02-09T00:53:41,056 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-02-09T00:53:41,058 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-02-09T00:53:41,058 or your builds will no longer be supported. 2026-02-09T00:53:41,060 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-02-09T00:53:41,061 ******************************************************************************** 2026-02-09T00:53:41,062 !! 2026-02-09T00:53:41,063 corresp(dist, value, root_dir) 2026-02-09T00:53:41,174 running dist_info 2026-02-09T00:53:41,197 creating /tmp/pip-modern-metadata-50j_n_ac/causal_testing_framework.egg-info 2026-02-09T00:53:41,200 writing /tmp/pip-modern-metadata-50j_n_ac/causal_testing_framework.egg-info/PKG-INFO 2026-02-09T00:53:41,212 writing dependency_links to /tmp/pip-modern-metadata-50j_n_ac/causal_testing_framework.egg-info/dependency_links.txt 2026-02-09T00:53:41,216 writing requirements to /tmp/pip-modern-metadata-50j_n_ac/causal_testing_framework.egg-info/requires.txt 2026-02-09T00:53:41,218 writing top-level names to /tmp/pip-modern-metadata-50j_n_ac/causal_testing_framework.egg-info/top_level.txt 2026-02-09T00:53:41,220 writing manifest file '/tmp/pip-modern-metadata-50j_n_ac/causal_testing_framework.egg-info/SOURCES.txt' 2026-02-09T00:53:41,343 listing git files failed - pretending there aren't any 2026-02-09T00:53:41,349 reading manifest file '/tmp/pip-modern-metadata-50j_n_ac/causal_testing_framework.egg-info/SOURCES.txt' 2026-02-09T00:53:41,351 adding license file 'LICENSE' 2026-02-09T00:53:41,357 writing manifest file '/tmp/pip-modern-metadata-50j_n_ac/causal_testing_framework.egg-info/SOURCES.txt' 2026-02-09T00:53:41,358 creating '/tmp/pip-modern-metadata-50j_n_ac/causal_testing_framework-14.0.0.dist-info' 2026-02-09T00:53:41,560 Preparing metadata (pyproject.toml): finished with status 'done' 2026-02-09T00:53:41,566 Source in /tmp/pip-wheel-l5sm9x9c/causal-testing-framework_103822a259fc40c2967e594ae00c3bcd has version 14.0.0, which satisfies requirement causal-testing-framework==14.0.0 from https://files.pythonhosted.org/packages/a0/a9/495ec9248128c3b29cb4633bc86042c6cbf419cad9a846f1eb39806e8667/causal_testing_framework-14.0.0.tar.gz 2026-02-09T00:53:41,567 Removed causal-testing-framework==14.0.0 from https://files.pythonhosted.org/packages/a0/a9/495ec9248128c3b29cb4633bc86042c6cbf419cad9a846f1eb39806e8667/causal_testing_framework-14.0.0.tar.gz from build tracker '/tmp/pip-build-tracker-ljtvo9rz' 2026-02-09T00:53:41,586 Created temporary directory: /tmp/pip-unpack-atvigitd 2026-02-09T00:53:41,586 Building wheels for collected packages: causal-testing-framework 2026-02-09T00:53:41,592 Created temporary directory: /tmp/pip-wheel-oeiwc3mk 2026-02-09T00:53:41,593 Destination directory: /tmp/pip-wheel-oeiwc3mk 2026-02-09T00:53:41,596 Building wheel for causal-testing-framework (pyproject.toml): started 2026-02-09T00:53:41,598 Running command Building wheel for causal-testing-framework (pyproject.toml) 2026-02-09T00:53:42,547 /tmp/pip-build-env-4n_8hyma/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-02-09T00:53:42,547 !! 2026-02-09T00:53:42,549 ******************************************************************************** 2026-02-09T00:53:42,549 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-02-09T00:53:42,551 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-02-09T00:53:42,552 or your builds will no longer be supported. 2026-02-09T00:53:42,554 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-02-09T00:53:42,555 ******************************************************************************** 2026-02-09T00:53:42,557 !! 2026-02-09T00:53:42,558 corresp(dist, value, root_dir) 2026-02-09T00:53:42,644 running bdist_wheel 2026-02-09T00:53:42,672 running build 2026-02-09T00:53:42,672 running build_py 2026-02-09T00:53:42,683 creating build/lib/causal_testing 2026-02-09T00:53:42,685 copying causal_testing/__init__.py -> build/lib/causal_testing 2026-02-09T00:53:42,688 copying causal_testing/__main__.py -> build/lib/causal_testing 2026-02-09T00:53:42,691 copying causal_testing/main.py -> build/lib/causal_testing 2026-02-09T00:53:42,694 copying causal_testing/_version.py -> build/lib/causal_testing 2026-02-09T00:53:42,698 creating build/lib/tests 2026-02-09T00:53:42,699 copying tests/__init__.py -> build/lib/tests 2026-02-09T00:53:42,702 creating build/lib/docs/source 2026-02-09T00:53:42,705 copying docs/source/conf.py -> build/lib/docs/source 2026-02-09T00:53:42,717 creating build/lib/causal_testing/estimation 2026-02-09T00:53:42,718 copying causal_testing/estimation/__init__.py -> build/lib/causal_testing/estimation 2026-02-09T00:53:42,720 copying causal_testing/estimation/cubic_spline_estimator.py -> build/lib/causal_testing/estimation 2026-02-09T00:53:42,723 copying causal_testing/estimation/effect_estimate.py -> build/lib/causal_testing/estimation 2026-02-09T00:53:42,725 copying causal_testing/estimation/abstract_estimator.py -> build/lib/causal_testing/estimation 2026-02-09T00:53:42,727 copying causal_testing/estimation/abstract_regression_estimator.py -> build/lib/causal_testing/estimation 2026-02-09T00:53:42,730 copying causal_testing/estimation/logistic_regression_estimator.py -> build/lib/causal_testing/estimation 2026-02-09T00:53:42,733 copying causal_testing/estimation/linear_regression_estimator.py -> build/lib/causal_testing/estimation 2026-02-09T00:53:42,736 copying causal_testing/estimation/instrumental_variable_estimator.py -> build/lib/causal_testing/estimation 2026-02-09T00:53:42,738 copying causal_testing/estimation/genetic_programming_regression_fitter.py -> build/lib/causal_testing/estimation 2026-02-09T00:53:42,741 copying causal_testing/estimation/experimental_estimator.py -> build/lib/causal_testing/estimation 2026-02-09T00:53:42,744 copying causal_testing/estimation/ipcw_estimator.py -> build/lib/causal_testing/estimation 2026-02-09T00:53:42,748 creating build/lib/causal_testing/testing 2026-02-09T00:53:42,749 copying causal_testing/testing/causal_test_result.py -> build/lib/causal_testing/testing 2026-02-09T00:53:42,752 copying causal_testing/testing/metamorphic_relation.py -> build/lib/causal_testing/testing 2026-02-09T00:53:42,756 copying causal_testing/testing/causal_test_case.py -> build/lib/causal_testing/testing 2026-02-09T00:53:42,758 copying causal_testing/testing/causal_test_adequacy.py -> build/lib/causal_testing/testing 2026-02-09T00:53:42,761 copying causal_testing/testing/base_test_case.py -> build/lib/causal_testing/testing 2026-02-09T00:53:42,764 copying causal_testing/testing/effect.py -> build/lib/causal_testing/testing 2026-02-09T00:53:42,766 copying causal_testing/testing/__init__.py -> build/lib/causal_testing/testing 2026-02-09T00:53:42,768 copying causal_testing/testing/intervention.py -> build/lib/causal_testing/testing 2026-02-09T00:53:42,771 copying causal_testing/testing/causal_effect.py -> build/lib/causal_testing/testing 2026-02-09T00:53:42,774 creating build/lib/causal_testing/surrogate 2026-02-09T00:53:42,776 copying causal_testing/surrogate/__init__.py -> build/lib/causal_testing/surrogate 2026-02-09T00:53:42,778 copying causal_testing/surrogate/causal_surrogate_assisted.py -> build/lib/causal_testing/surrogate 2026-02-09T00:53:42,781 copying causal_testing/surrogate/surrogate_search_algorithms.py -> build/lib/causal_testing/surrogate 2026-02-09T00:53:42,784 creating build/lib/causal_testing/utils 2026-02-09T00:53:42,786 copying causal_testing/utils/validation.py -> build/lib/causal_testing/utils 2026-02-09T00:53:42,788 copying causal_testing/utils/__init__.py -> build/lib/causal_testing/utils 2026-02-09T00:53:42,791 creating build/lib/causal_testing/specification 2026-02-09T00:53:42,792 copying causal_testing/specification/scenario.py -> build/lib/causal_testing/specification 2026-02-09T00:53:42,795 copying causal_testing/specification/__init__.py -> build/lib/causal_testing/specification 2026-02-09T00:53:42,797 copying causal_testing/specification/causal_dag.py -> build/lib/causal_testing/specification 2026-02-09T00:53:42,800 copying causal_testing/specification/variable.py -> build/lib/causal_testing/specification 2026-02-09T00:53:42,803 creating build/lib/examples/poisson-line-process 2026-02-09T00:53:42,805 copying examples/poisson-line-process/example_pure_python.py -> build/lib/examples/poisson-line-process 2026-02-09T00:53:42,808 creating build/lib/examples/lr91 2026-02-09T00:53:42,810 copying examples/lr91/example_max_conductances.py -> build/lib/examples/lr91 2026-02-09T00:53:42,815 creating build/lib/examples/covasim_/vaccinating_elderly 2026-02-09T00:53:42,817 copying examples/covasim_/vaccinating_elderly/example_vaccine.py -> build/lib/examples/covasim_/vaccinating_elderly 2026-02-09T00:53:42,820 creating build/lib/examples/covasim_/doubling_beta 2026-02-09T00:53:42,822 copying examples/covasim_/doubling_beta/example_beta.py -> build/lib/examples/covasim_/doubling_beta 2026-02-09T00:53:42,826 creating build/lib/tests/estimation_tests 2026-02-09T00:53:42,827 copying tests/estimation_tests/test_cubic_spline_estimator.py -> build/lib/tests/estimation_tests 2026-02-09T00:53:42,829 copying tests/estimation_tests/test_ipcw_estimator.py -> build/lib/tests/estimation_tests 2026-02-09T00:53:42,832 copying tests/estimation_tests/test_instrumental_variable_estimator.py -> build/lib/tests/estimation_tests 2026-02-09T00:53:42,834 copying tests/estimation_tests/test_linear_regression_estimator.py -> build/lib/tests/estimation_tests 2026-02-09T00:53:42,837 copying tests/estimation_tests/test_logistic_regression_estimator.py -> build/lib/tests/estimation_tests 2026-02-09T00:53:42,839 copying tests/estimation_tests/test_experimental_estimator.py -> build/lib/tests/estimation_tests 2026-02-09T00:53:42,842 copying tests/estimation_tests/test_genetic_programming_regression_fitter.py -> build/lib/tests/estimation_tests 2026-02-09T00:53:42,844 creating build/lib/tests/testing_tests 2026-02-09T00:53:42,846 copying tests/testing_tests/test_causal_test_adequacy.py -> build/lib/tests/testing_tests 2026-02-09T00:53:42,849 copying tests/testing_tests/test_causal_effect.py -> build/lib/tests/testing_tests 2026-02-09T00:53:42,851 copying tests/testing_tests/test_causal_test_case.py -> build/lib/tests/testing_tests 2026-02-09T00:53:42,854 copying tests/testing_tests/test_metamorphic_relations.py -> build/lib/tests/testing_tests 2026-02-09T00:53:42,858 creating build/lib/tests/main_tests 2026-02-09T00:53:42,859 copying tests/main_tests/test_main.py -> build/lib/tests/main_tests 2026-02-09T00:53:42,862 creating build/lib/tests/surrogate_tests 2026-02-09T00:53:42,864 copying tests/surrogate_tests/test_causal_surrogate_assisted.py -> build/lib/tests/surrogate_tests 2026-02-09T00:53:42,867 creating build/lib/tests/tutorial_tests 2026-02-09T00:53:42,868 copying tests/tutorial_tests/test_tutorials.py -> build/lib/tests/tutorial_tests 2026-02-09T00:53:42,872 creating build/lib/tests/specification_tests 2026-02-09T00:53:42,873 copying tests/specification_tests/test_causal_dag.py -> build/lib/tests/specification_tests 2026-02-09T00:53:42,876 copying tests/specification_tests/test_variable.py -> build/lib/tests/specification_tests 2026-02-09T00:53:42,879 running egg_info 2026-02-09T00:53:42,894 writing causal_testing_framework.egg-info/PKG-INFO 2026-02-09T00:53:42,902 writing dependency_links to causal_testing_framework.egg-info/dependency_links.txt 2026-02-09T00:53:42,906 writing requirements to causal_testing_framework.egg-info/requires.txt 2026-02-09T00:53:42,907 writing top-level names to causal_testing_framework.egg-info/top_level.txt 2026-02-09T00:53:42,996 listing git files failed - pretending there aren't any 2026-02-09T00:53:43,001 reading manifest file 'causal_testing_framework.egg-info/SOURCES.txt' 2026-02-09T00:53:43,069 adding license file 'LICENSE' 2026-02-09T00:53:43,078 writing manifest file 'causal_testing_framework.egg-info/SOURCES.txt' 2026-02-09T00:53:43,115 copying docs/Makefile -> build/lib/docs 2026-02-09T00:53:43,118 copying docs/README.md -> build/lib/docs 2026-02-09T00:53:43,120 copying docs/make.bat -> build/lib/docs 2026-02-09T00:53:43,123 creating build/lib/dafni 2026-02-09T00:53:43,124 copying dafni/.dockerignore -> build/lib/dafni 2026-02-09T00:53:43,126 copying dafni/.env -> build/lib/dafni 2026-02-09T00:53:43,129 copying dafni/Dockerfile -> build/lib/dafni 2026-02-09T00:53:43,131 copying dafni/README.md -> build/lib/dafni 2026-02-09T00:53:43,134 copying dafni/docker-compose.yaml -> build/lib/dafni 2026-02-09T00:53:43,136 copying dafni/entrypoint.sh -> build/lib/dafni 2026-02-09T00:53:43,139 copying dafni/model_definition.yaml -> build/lib/dafni 2026-02-09T00:53:43,143 creating build/lib/images 2026-02-09T00:53:43,144 copying images/.gitignore -> build/lib/images 2026-02-09T00:53:43,147 copying images/schematic-dark.png -> build/lib/images 2026-02-09T00:53:43,150 copying images/schematic.png -> build/lib/images 2026-02-09T00:53:43,153 copying images/schematic.tex -> build/lib/images 2026-02-09T00:53:43,157 copying examples/.gitignore -> build/lib/examples 2026-02-09T00:53:43,160 creating build/lib/paper 2026-02-09T00:53:43,161 copying paper/paper.bib -> build/lib/paper 2026-02-09T00:53:43,164 copying paper/paper.md -> build/lib/paper 2026-02-09T00:53:43,168 copying docs/source/background.rst -> build/lib/docs/source 2026-02-09T00:53:43,170 copying docs/source/credits.rst -> build/lib/docs/source 2026-02-09T00:53:43,173 copying docs/source/glossary.rst -> build/lib/docs/source 2026-02-09T00:53:43,176 copying docs/source/index.rst -> build/lib/docs/source 2026-02-09T00:53:43,179 copying docs/source/installation.rst -> build/lib/docs/source 2026-02-09T00:53:43,182 copying docs/source/requirements.txt -> build/lib/docs/source 2026-02-09T00:53:43,185 copying docs/source/tutorials.rst -> build/lib/docs/source 2026-02-09T00:53:43,187 creating build/lib/docs/source/modules 2026-02-09T00:53:43,189 copying docs/source/modules/causal_specification.rst -> build/lib/docs/source/modules 2026-02-09T00:53:43,192 copying docs/source/modules/causal_testing.rst -> build/lib/docs/source/modules 2026-02-09T00:53:43,196 copying docs/source/modules/estimators.rst -> build/lib/docs/source/modules 2026-02-09T00:53:43,199 creating build/lib/docs/source/dev 2026-02-09T00:53:43,200 copying docs/source/dev/actions_and_webhooks.rst -> build/lib/docs/source/dev 2026-02-09T00:53:43,203 copying docs/source/dev/documentation.rst -> build/lib/docs/source/dev 2026-02-09T00:53:43,206 copying docs/source/dev/version_release.rst -> build/lib/docs/source/dev 2026-02-09T00:53:43,208 creating build/lib/docs/source/_static/images 2026-02-09T00:53:43,210 copying docs/source/_static/images/CITCOM-logo-white.png -> build/lib/docs/source/_static/images 2026-02-09T00:53:43,214 copying docs/source/_static/images/CITCOM-logo.png -> build/lib/docs/source/_static/images 2026-02-09T00:53:43,218 copying docs/source/_static/images/Sheffield-logo.png -> build/lib/docs/source/_static/images 2026-02-09T00:53:43,224 copying docs/source/_static/images/example_dag.png -> build/lib/docs/source/_static/images 2026-02-09T00:53:43,228 creating build/lib/docs/source/_static/css 2026-02-09T00:53:43,229 copying docs/source/_static/css/custom.css -> build/lib/docs/source/_static/css 2026-02-09T00:53:43,232 creating build/lib/docs/source/tutorials/visualising_causal_test_results 2026-02-09T00:53:43,234 copying docs/source/tutorials/visualising_causal_test_results/visualise_causal_test_results.ipynb -> build/lib/docs/source/tutorials/visualising_causal_test_results 2026-02-09T00:53:43,267 creating build/lib/docs/source/tutorials/poisson_line_process 2026-02-09T00:53:43,269 copying docs/source/tutorials/poisson_line_process/causal_tests.json -> build/lib/docs/source/tutorials/poisson_line_process 2026-02-09T00:53:43,272 copying docs/source/tutorials/poisson_line_process/dag.dot -> build/lib/docs/source/tutorials/poisson_line_process 2026-02-09T00:53:43,274 copying docs/source/tutorials/poisson_line_process/dag.png -> build/lib/docs/source/tutorials/poisson_line_process 2026-02-09T00:53:43,279 copying docs/source/tutorials/poisson_line_process/poisson_line_process_tutorial.ipynb -> build/lib/docs/source/tutorials/poisson_line_process 2026-02-09T00:53:43,283 creating build/lib/docs/source/tutorials/vaccinating_elderly 2026-02-09T00:53:43,284 copying docs/source/tutorials/vaccinating_elderly/causal_test_results.json -> build/lib/docs/source/tutorials/vaccinating_elderly 2026-02-09T00:53:43,288 copying docs/source/tutorials/vaccinating_elderly/causal_tests.json -> build/lib/docs/source/tutorials/vaccinating_elderly 2026-02-09T00:53:43,290 copying docs/source/tutorials/vaccinating_elderly/dag.dot -> build/lib/docs/source/tutorials/vaccinating_elderly 2026-02-09T00:53:43,293 copying docs/source/tutorials/vaccinating_elderly/dag_image.png -> build/lib/docs/source/tutorials/vaccinating_elderly 2026-02-09T00:53:43,297 copying docs/source/tutorials/vaccinating_elderly/simulated_data.csv -> build/lib/docs/source/tutorials/vaccinating_elderly 2026-02-09T00:53:43,300 copying docs/source/tutorials/vaccinating_elderly/vaccinating_elderly_tutorial.ipynb -> build/lib/docs/source/tutorials/vaccinating_elderly 2026-02-09T00:53:43,304 creating build/lib/docs/source/tutorials/poisson_line_process/data/random 2026-02-09T00:53:43,306 copying docs/source/tutorials/poisson_line_process/data/random/data_random_1000.csv -> build/lib/docs/source/tutorials/poisson_line_process/data/random 2026-02-09T00:53:43,312 creating build/lib/dafni/data/outputs 2026-02-09T00:53:43,314 copying dafni/data/outputs/causal_test_results.json -> build/lib/dafni/data/outputs 2026-02-09T00:53:43,317 creating build/lib/dafni/data/inputs/causal-tests 2026-02-09T00:53:43,319 copying dafni/data/inputs/causal-tests/causal_tests.json -> build/lib/dafni/data/inputs/causal-tests 2026-02-09T00:53:43,322 creating build/lib/dafni/data/inputs/dag-data 2026-02-09T00:53:43,323 copying dafni/data/inputs/dag-data/dag.dot -> build/lib/dafni/data/inputs/dag-data 2026-02-09T00:53:43,326 creating build/lib/dafni/data/inputs/runtime-data 2026-02-09T00:53:43,328 copying dafni/data/inputs/runtime-data/runtime_data.csv -> build/lib/dafni/data/inputs/runtime-data 2026-02-09T00:53:43,331 copying examples/poisson-line-process/.gitignore -> build/lib/examples/poisson-line-process 2026-02-09T00:53:43,334 copying examples/poisson-line-process/README.md -> build/lib/examples/poisson-line-process 2026-02-09T00:53:43,337 copying examples/poisson-line-process/causal_tests.json -> build/lib/examples/poisson-line-process 2026-02-09T00:53:43,340 copying examples/poisson-line-process/dag.dot -> build/lib/examples/poisson-line-process 2026-02-09T00:53:43,343 copying examples/poisson-line-process/dag.png -> build/lib/examples/poisson-line-process 2026-02-09T00:53:43,348 copying examples/poisson-line-process/poisson_line_process.ipynb -> build/lib/examples/poisson-line-process 2026-02-09T00:53:43,352 copying examples/lr91/README.md -> build/lib/examples/lr91 2026-02-09T00:53:43,355 copying examples/lr91/dag.dot -> build/lib/examples/lr91 2026-02-09T00:53:43,357 copying examples/lr91/dag.png -> build/lib/examples/lr91 2026-02-09T00:53:43,362 creating build/lib/examples/poisson-line-process/data/random 2026-02-09T00:53:43,364 copying examples/poisson-line-process/data/random/data_random_1000.csv -> build/lib/examples/poisson-line-process/data/random 2026-02-09T00:53:43,370 creating build/lib/examples/poisson-line-process/data/smt_100 2026-02-09T00:53:43,372 copying examples/poisson-line-process/data/smt_100/data_smt_wh10_100.csv -> build/lib/examples/poisson-line-process/data/smt_100 2026-02-09T00:53:43,376 copying examples/poisson-line-process/data/smt_100/data_smt_wh1_100.csv -> build/lib/examples/poisson-line-process/data/smt_100 2026-02-09T00:53:43,379 copying examples/poisson-line-process/data/smt_100/data_smt_wh2_100.csv -> build/lib/examples/poisson-line-process/data/smt_100 2026-02-09T00:53:43,383 copying examples/poisson-line-process/data/smt_100/data_smt_wh3_100.csv -> build/lib/examples/poisson-line-process/data/smt_100 2026-02-09T00:53:43,387 copying examples/poisson-line-process/data/smt_100/data_smt_wh4_100.csv -> build/lib/examples/poisson-line-process/data/smt_100 2026-02-09T00:53:43,391 copying examples/poisson-line-process/data/smt_100/data_smt_wh5_100.csv -> build/lib/examples/poisson-line-process/data/smt_100 2026-02-09T00:53:43,394 copying examples/poisson-line-process/data/smt_100/data_smt_wh6_100.csv -> build/lib/examples/poisson-line-process/data/smt_100 2026-02-09T00:53:43,398 copying examples/poisson-line-process/data/smt_100/data_smt_wh7_100.csv -> build/lib/examples/poisson-line-process/data/smt_100 2026-02-09T00:53:43,401 copying examples/poisson-line-process/data/smt_100/data_smt_wh8_100.csv -> build/lib/examples/poisson-line-process/data/smt_100 2026-02-09T00:53:43,405 copying examples/poisson-line-process/data/smt_100/data_smt_wh9_100.csv -> build/lib/examples/poisson-line-process/data/smt_100 2026-02-09T00:53:43,409 creating build/lib/examples/lr91/data 2026-02-09T00:53:43,410 copying examples/lr91/data/normalised_results.csv -> build/lib/examples/lr91/data 2026-02-09T00:53:43,414 copying examples/lr91/data/results.csv -> build/lib/examples/lr91/data 2026-02-09T00:53:43,418 copying examples/covasim_/vaccinating_elderly/README.md -> build/lib/examples/covasim_/vaccinating_elderly 2026-02-09T00:53:43,421 copying examples/covasim_/vaccinating_elderly/dag.dot -> build/lib/examples/covasim_/vaccinating_elderly 2026-02-09T00:53:43,424 copying examples/covasim_/vaccinating_elderly/dag.png -> build/lib/examples/covasim_/vaccinating_elderly 2026-02-09T00:53:43,428 copying examples/covasim_/vaccinating_elderly/simulated_data.csv -> build/lib/examples/covasim_/vaccinating_elderly 2026-02-09T00:53:43,431 copying examples/covasim_/doubling_beta/README.md -> build/lib/examples/covasim_/doubling_beta 2026-02-09T00:53:43,434 copying examples/covasim_/doubling_beta/dag.dot -> build/lib/examples/covasim_/doubling_beta 2026-02-09T00:53:43,436 copying examples/covasim_/doubling_beta/dag.png -> build/lib/examples/covasim_/doubling_beta 2026-02-09T00:53:43,440 creating build/lib/examples/covasim_/doubling_beta/data 2026-02-09T00:53:43,441 copying examples/covasim_/doubling_beta/data/10k_observational_data.csv -> build/lib/examples/covasim_/doubling_beta/data 2026-02-09T00:53:43,481 copying examples/covasim_/doubling_beta/data/high_contacts_avg_age_22.2.csv -> build/lib/examples/covasim_/doubling_beta/data 2026-02-09T00:53:43,495 copying examples/covasim_/doubling_beta/data/high_contacts_avg_age_30.1.csv -> build/lib/examples/covasim_/doubling_beta/data 2026-02-09T00:53:43,507 copying examples/covasim_/doubling_beta/data/low_contacts_avg_age_22.2.csv -> build/lib/examples/covasim_/doubling_beta/data 2026-02-09T00:53:43,520 copying examples/covasim_/doubling_beta/data/low_contacts_avg_age_30.1.csv -> build/lib/examples/covasim_/doubling_beta/data 2026-02-09T00:53:43,535 copying examples/covasim_/doubling_beta/data/older_population.csv -> build/lib/examples/covasim_/doubling_beta/data 2026-02-09T00:53:43,557 copying examples/covasim_/doubling_beta/data/younger_population.csv -> build/lib/examples/covasim_/doubling_beta/data 2026-02-09T00:53:43,579 creating build/lib/tests/resources/data 2026-02-09T00:53:43,582 copying tests/resources/data/dag.dot -> build/lib/tests/resources/data 2026-02-09T00:53:43,585 copying tests/resources/data/dag.xml -> build/lib/tests/resources/data 2026-02-09T00:53:43,588 copying tests/resources/data/data.csv -> build/lib/tests/resources/data 2026-02-09T00:53:43,590 copying tests/resources/data/data.pqt -> build/lib/tests/resources/data 2026-02-09T00:53:43,593 copying tests/resources/data/data_with_categorical.csv -> build/lib/tests/resources/data 2026-02-09T00:53:43,597 copying tests/resources/data/data_with_meta.csv -> build/lib/tests/resources/data 2026-02-09T00:53:43,600 copying tests/resources/data/nhefs.csv -> build/lib/tests/resources/data 2026-02-09T00:53:43,613 copying tests/resources/data/scarf_data.csv -> build/lib/tests/resources/data 2026-02-09T00:53:43,615 copying tests/resources/data/temporal_data.csv -> build/lib/tests/resources/data 2026-02-09T00:53:43,618 copying tests/resources/data/tests.json -> build/lib/tests/resources/data 2026-02-09T00:53:43,657 installing to build/bdist.linux-armv7l/wheel 2026-02-09T00:53:43,657 running install 2026-02-09T00:53:43,683 running install_lib 2026-02-09T00:53:43,692 creating build/bdist.linux-armv7l/wheel 2026-02-09T00:53:43,694 creating build/bdist.linux-armv7l/wheel/docs 2026-02-09T00:53:43,696 copying build/lib/docs/README.md -> build/bdist.linux-armv7l/wheel/./docs 2026-02-09T00:53:43,699 creating build/bdist.linux-armv7l/wheel/docs/source 2026-02-09T00:53:43,700 copying build/lib/docs/source/installation.rst -> build/bdist.linux-armv7l/wheel/./docs/source 2026-02-09T00:53:43,704 creating build/bdist.linux-armv7l/wheel/docs/source/modules 2026-02-09T00:53:43,706 copying build/lib/docs/source/modules/causal_specification.rst -> build/bdist.linux-armv7l/wheel/./docs/source/modules 2026-02-09T00:53:43,709 copying build/lib/docs/source/modules/estimators.rst -> build/bdist.linux-armv7l/wheel/./docs/source/modules 2026-02-09T00:53:43,711 copying build/lib/docs/source/modules/causal_testing.rst -> build/bdist.linux-armv7l/wheel/./docs/source/modules 2026-02-09T00:53:43,715 creating build/bdist.linux-armv7l/wheel/docs/source/_static 2026-02-09T00:53:43,717 creating build/bdist.linux-armv7l/wheel/docs/source/_static/images 2026-02-09T00:53:43,719 copying build/lib/docs/source/_static/images/example_dag.png -> build/bdist.linux-armv7l/wheel/./docs/source/_static/images 2026-02-09T00:53:43,722 copying build/lib/docs/source/_static/images/CITCOM-logo.png -> build/bdist.linux-armv7l/wheel/./docs/source/_static/images 2026-02-09T00:53:43,725 copying build/lib/docs/source/_static/images/Sheffield-logo.png -> build/bdist.linux-armv7l/wheel/./docs/source/_static/images 2026-02-09T00:53:43,731 copying build/lib/docs/source/_static/images/CITCOM-logo-white.png -> build/bdist.linux-armv7l/wheel/./docs/source/_static/images 2026-02-09T00:53:43,735 creating build/bdist.linux-armv7l/wheel/docs/source/_static/css 2026-02-09T00:53:43,737 copying build/lib/docs/source/_static/css/custom.css -> build/bdist.linux-armv7l/wheel/./docs/source/_static/css 2026-02-09T00:53:43,739 copying build/lib/docs/source/glossary.rst -> build/bdist.linux-armv7l/wheel/./docs/source 2026-02-09T00:53:43,741 copying build/lib/docs/source/tutorials.rst -> build/bdist.linux-armv7l/wheel/./docs/source 2026-02-09T00:53:43,744 copying build/lib/docs/source/credits.rst -> build/bdist.linux-armv7l/wheel/./docs/source 2026-02-09T00:53:43,747 copying build/lib/docs/source/conf.py -> build/bdist.linux-armv7l/wheel/./docs/source 2026-02-09T00:53:43,749 copying build/lib/docs/source/background.rst -> build/bdist.linux-armv7l/wheel/./docs/source 2026-02-09T00:53:43,752 copying build/lib/docs/source/index.rst -> build/bdist.linux-armv7l/wheel/./docs/source 2026-02-09T00:53:43,756 creating build/bdist.linux-armv7l/wheel/docs/source/tutorials 2026-02-09T00:53:43,758 creating build/bdist.linux-armv7l/wheel/docs/source/tutorials/visualising_causal_test_results 2026-02-09T00:53:43,760 copying build/lib/docs/source/tutorials/visualising_causal_test_results/visualise_causal_test_results.ipynb -> build/bdist.linux-armv7l/wheel/./docs/source/tutorials/visualising_causal_test_results 2026-02-09T00:53:43,785 creating build/bdist.linux-armv7l/wheel/docs/source/tutorials/poisson_line_process 2026-02-09T00:53:43,787 copying build/lib/docs/source/tutorials/poisson_line_process/causal_tests.json -> build/bdist.linux-armv7l/wheel/./docs/source/tutorials/poisson_line_process 2026-02-09T00:53:43,790 copying build/lib/docs/source/tutorials/poisson_line_process/dag.png -> build/bdist.linux-armv7l/wheel/./docs/source/tutorials/poisson_line_process 2026-02-09T00:53:43,795 creating build/bdist.linux-armv7l/wheel/docs/source/tutorials/poisson_line_process/data 2026-02-09T00:53:43,797 creating build/bdist.linux-armv7l/wheel/docs/source/tutorials/poisson_line_process/data/random 2026-02-09T00:53:43,798 copying build/lib/docs/source/tutorials/poisson_line_process/data/random/data_random_1000.csv -> build/bdist.linux-armv7l/wheel/./docs/source/tutorials/poisson_line_process/data/random 2026-02-09T00:53:43,805 copying build/lib/docs/source/tutorials/poisson_line_process/poisson_line_process_tutorial.ipynb -> build/bdist.linux-armv7l/wheel/./docs/source/tutorials/poisson_line_process 2026-02-09T00:53:43,808 copying build/lib/docs/source/tutorials/poisson_line_process/dag.dot -> build/bdist.linux-armv7l/wheel/./docs/source/tutorials/poisson_line_process 2026-02-09T00:53:43,812 creating build/bdist.linux-armv7l/wheel/docs/source/tutorials/vaccinating_elderly 2026-02-09T00:53:43,813 copying build/lib/docs/source/tutorials/vaccinating_elderly/causal_tests.json -> build/bdist.linux-armv7l/wheel/./docs/source/tutorials/vaccinating_elderly 2026-02-09T00:53:43,816 copying build/lib/docs/source/tutorials/vaccinating_elderly/simulated_data.csv -> build/bdist.linux-armv7l/wheel/./docs/source/tutorials/vaccinating_elderly 2026-02-09T00:53:43,819 copying build/lib/docs/source/tutorials/vaccinating_elderly/dag_image.png -> build/bdist.linux-armv7l/wheel/./docs/source/tutorials/vaccinating_elderly 2026-02-09T00:53:43,822 copying build/lib/docs/source/tutorials/vaccinating_elderly/causal_test_results.json -> build/bdist.linux-armv7l/wheel/./docs/source/tutorials/vaccinating_elderly 2026-02-09T00:53:43,824 copying build/lib/docs/source/tutorials/vaccinating_elderly/dag.dot -> build/bdist.linux-armv7l/wheel/./docs/source/tutorials/vaccinating_elderly 2026-02-09T00:53:43,827 copying build/lib/docs/source/tutorials/vaccinating_elderly/vaccinating_elderly_tutorial.ipynb -> build/bdist.linux-armv7l/wheel/./docs/source/tutorials/vaccinating_elderly 2026-02-09T00:53:43,831 creating build/bdist.linux-armv7l/wheel/docs/source/dev 2026-02-09T00:53:43,832 copying build/lib/docs/source/dev/documentation.rst -> build/bdist.linux-armv7l/wheel/./docs/source/dev 2026-02-09T00:53:43,835 copying build/lib/docs/source/dev/actions_and_webhooks.rst -> build/bdist.linux-armv7l/wheel/./docs/source/dev 2026-02-09T00:53:43,837 copying build/lib/docs/source/dev/version_release.rst -> build/bdist.linux-armv7l/wheel/./docs/source/dev 2026-02-09T00:53:43,840 copying build/lib/docs/source/requirements.txt -> build/bdist.linux-armv7l/wheel/./docs/source 2026-02-09T00:53:43,842 copying build/lib/docs/Makefile -> build/bdist.linux-armv7l/wheel/./docs 2026-02-09T00:53:43,844 copying build/lib/docs/make.bat -> build/bdist.linux-armv7l/wheel/./docs 2026-02-09T00:53:43,848 creating build/bdist.linux-armv7l/wheel/dafni 2026-02-09T00:53:43,849 copying build/lib/dafni/README.md -> build/bdist.linux-armv7l/wheel/./dafni 2026-02-09T00:53:43,852 copying build/lib/dafni/Dockerfile -> build/bdist.linux-armv7l/wheel/./dafni 2026-02-09T00:53:43,854 copying build/lib/dafni/docker-compose.yaml -> build/bdist.linux-armv7l/wheel/./dafni 2026-02-09T00:53:43,857 copying build/lib/dafni/entrypoint.sh -> build/bdist.linux-armv7l/wheel/./dafni 2026-02-09T00:53:43,860 creating build/bdist.linux-armv7l/wheel/dafni/data 2026-02-09T00:53:43,862 creating build/bdist.linux-armv7l/wheel/dafni/data/outputs 2026-02-09T00:53:43,864 copying build/lib/dafni/data/outputs/causal_test_results.json -> build/bdist.linux-armv7l/wheel/./dafni/data/outputs 2026-02-09T00:53:43,868 creating build/bdist.linux-armv7l/wheel/dafni/data/inputs 2026-02-09T00:53:43,869 creating build/bdist.linux-armv7l/wheel/dafni/data/inputs/causal-tests 2026-02-09T00:53:43,871 copying build/lib/dafni/data/inputs/causal-tests/causal_tests.json -> build/bdist.linux-armv7l/wheel/./dafni/data/inputs/causal-tests 2026-02-09T00:53:43,875 creating build/bdist.linux-armv7l/wheel/dafni/data/inputs/dag-data 2026-02-09T00:53:43,876 copying build/lib/dafni/data/inputs/dag-data/dag.dot -> build/bdist.linux-armv7l/wheel/./dafni/data/inputs/dag-data 2026-02-09T00:53:43,879 creating build/bdist.linux-armv7l/wheel/dafni/data/inputs/runtime-data 2026-02-09T00:53:43,881 copying build/lib/dafni/data/inputs/runtime-data/runtime_data.csv -> build/bdist.linux-armv7l/wheel/./dafni/data/inputs/runtime-data 2026-02-09T00:53:43,883 copying build/lib/dafni/model_definition.yaml -> build/bdist.linux-armv7l/wheel/./dafni 2026-02-09T00:53:43,886 copying build/lib/dafni/.env -> build/bdist.linux-armv7l/wheel/./dafni 2026-02-09T00:53:43,889 copying build/lib/dafni/.dockerignore -> build/bdist.linux-armv7l/wheel/./dafni 2026-02-09T00:53:43,891 creating build/bdist.linux-armv7l/wheel/images 2026-02-09T00:53:43,893 copying build/lib/images/schematic.tex -> build/bdist.linux-armv7l/wheel/./images 2026-02-09T00:53:43,896 copying build/lib/images/schematic-dark.png -> build/bdist.linux-armv7l/wheel/./images 2026-02-09T00:53:43,899 copying build/lib/images/.gitignore -> build/bdist.linux-armv7l/wheel/./images 2026-02-09T00:53:43,901 copying build/lib/images/schematic.png -> build/bdist.linux-armv7l/wheel/./images 2026-02-09T00:53:43,905 creating build/bdist.linux-armv7l/wheel/causal_testing 2026-02-09T00:53:43,907 copying build/lib/causal_testing/__init__.py -> build/bdist.linux-armv7l/wheel/./causal_testing 2026-02-09T00:53:43,910 creating build/bdist.linux-armv7l/wheel/causal_testing/estimation 2026-02-09T00:53:43,911 copying build/lib/causal_testing/estimation/__init__.py -> build/bdist.linux-armv7l/wheel/./causal_testing/estimation 2026-02-09T00:53:43,914 copying build/lib/causal_testing/estimation/cubic_spline_estimator.py -> build/bdist.linux-armv7l/wheel/./causal_testing/estimation 2026-02-09T00:53:43,917 copying build/lib/causal_testing/estimation/effect_estimate.py -> build/bdist.linux-armv7l/wheel/./causal_testing/estimation 2026-02-09T00:53:43,919 copying build/lib/causal_testing/estimation/abstract_estimator.py -> build/bdist.linux-armv7l/wheel/./causal_testing/estimation 2026-02-09T00:53:43,921 copying build/lib/causal_testing/estimation/abstract_regression_estimator.py -> build/bdist.linux-armv7l/wheel/./causal_testing/estimation 2026-02-09T00:53:43,924 copying build/lib/causal_testing/estimation/logistic_regression_estimator.py -> build/bdist.linux-armv7l/wheel/./causal_testing/estimation 2026-02-09T00:53:43,926 copying build/lib/causal_testing/estimation/linear_regression_estimator.py -> build/bdist.linux-armv7l/wheel/./causal_testing/estimation 2026-02-09T00:53:43,930 copying build/lib/causal_testing/estimation/instrumental_variable_estimator.py -> build/bdist.linux-armv7l/wheel/./causal_testing/estimation 2026-02-09T00:53:43,932 copying build/lib/causal_testing/estimation/genetic_programming_regression_fitter.py -> build/bdist.linux-armv7l/wheel/./causal_testing/estimation 2026-02-09T00:53:43,935 copying build/lib/causal_testing/estimation/experimental_estimator.py -> build/bdist.linux-armv7l/wheel/./causal_testing/estimation 2026-02-09T00:53:43,938 copying build/lib/causal_testing/estimation/ipcw_estimator.py -> build/bdist.linux-armv7l/wheel/./causal_testing/estimation 2026-02-09T00:53:43,943 creating build/bdist.linux-armv7l/wheel/causal_testing/testing 2026-02-09T00:53:43,944 copying build/lib/causal_testing/testing/causal_test_result.py -> build/bdist.linux-armv7l/wheel/./causal_testing/testing 2026-02-09T00:53:43,947 copying build/lib/causal_testing/testing/metamorphic_relation.py -> build/bdist.linux-armv7l/wheel/./causal_testing/testing 2026-02-09T00:53:43,950 copying build/lib/causal_testing/testing/causal_test_case.py -> build/bdist.linux-armv7l/wheel/./causal_testing/testing 2026-02-09T00:53:43,952 copying build/lib/causal_testing/testing/causal_test_adequacy.py -> build/bdist.linux-armv7l/wheel/./causal_testing/testing 2026-02-09T00:53:43,955 copying build/lib/causal_testing/testing/base_test_case.py -> build/bdist.linux-armv7l/wheel/./causal_testing/testing 2026-02-09T00:53:43,958 copying build/lib/causal_testing/testing/effect.py -> build/bdist.linux-armv7l/wheel/./causal_testing/testing 2026-02-09T00:53:43,960 copying build/lib/causal_testing/testing/__init__.py -> build/bdist.linux-armv7l/wheel/./causal_testing/testing 2026-02-09T00:53:43,962 copying build/lib/causal_testing/testing/intervention.py -> build/bdist.linux-armv7l/wheel/./causal_testing/testing 2026-02-09T00:53:43,965 copying build/lib/causal_testing/testing/causal_effect.py -> build/bdist.linux-armv7l/wheel/./causal_testing/testing 2026-02-09T00:53:43,968 creating build/bdist.linux-armv7l/wheel/causal_testing/surrogate 2026-02-09T00:53:43,970 copying build/lib/causal_testing/surrogate/__init__.py -> build/bdist.linux-armv7l/wheel/./causal_testing/surrogate 2026-02-09T00:53:43,972 copying build/lib/causal_testing/surrogate/causal_surrogate_assisted.py -> build/bdist.linux-armv7l/wheel/./causal_testing/surrogate 2026-02-09T00:53:43,975 copying build/lib/causal_testing/surrogate/surrogate_search_algorithms.py -> build/bdist.linux-armv7l/wheel/./causal_testing/surrogate 2026-02-09T00:53:43,977 copying build/lib/causal_testing/__main__.py -> build/bdist.linux-armv7l/wheel/./causal_testing 2026-02-09T00:53:43,980 copying build/lib/causal_testing/main.py -> build/bdist.linux-armv7l/wheel/./causal_testing 2026-02-09T00:53:43,984 creating build/bdist.linux-armv7l/wheel/causal_testing/utils 2026-02-09T00:53:43,985 copying build/lib/causal_testing/utils/validation.py -> build/bdist.linux-armv7l/wheel/./causal_testing/utils 2026-02-09T00:53:43,988 copying build/lib/causal_testing/utils/__init__.py -> build/bdist.linux-armv7l/wheel/./causal_testing/utils 2026-02-09T00:53:43,991 creating build/bdist.linux-armv7l/wheel/causal_testing/specification 2026-02-09T00:53:43,992 copying build/lib/causal_testing/specification/scenario.py -> build/bdist.linux-armv7l/wheel/./causal_testing/specification 2026-02-09T00:53:43,995 copying build/lib/causal_testing/specification/__init__.py -> build/bdist.linux-armv7l/wheel/./causal_testing/specification 2026-02-09T00:53:43,997 copying build/lib/causal_testing/specification/causal_dag.py -> build/bdist.linux-armv7l/wheel/./causal_testing/specification 2026-02-09T00:53:44,000 copying build/lib/causal_testing/specification/variable.py -> build/bdist.linux-armv7l/wheel/./causal_testing/specification 2026-02-09T00:53:44,003 copying build/lib/causal_testing/_version.py -> build/bdist.linux-armv7l/wheel/./causal_testing 2026-02-09T00:53:44,006 creating build/bdist.linux-armv7l/wheel/examples 2026-02-09T00:53:44,009 creating build/bdist.linux-armv7l/wheel/examples/poisson-line-process 2026-02-09T00:53:44,010 copying build/lib/examples/poisson-line-process/causal_tests.json -> build/bdist.linux-armv7l/wheel/./examples/poisson-line-process 2026-02-09T00:53:44,013 copying build/lib/examples/poisson-line-process/README.md -> build/bdist.linux-armv7l/wheel/./examples/poisson-line-process 2026-02-09T00:53:44,016 copying build/lib/examples/poisson-line-process/poisson_line_process.ipynb -> build/bdist.linux-armv7l/wheel/./examples/poisson-line-process 2026-02-09T00:53:44,019 copying build/lib/examples/poisson-line-process/dag.png -> build/bdist.linux-armv7l/wheel/./examples/poisson-line-process 2026-02-09T00:53:44,024 creating build/bdist.linux-armv7l/wheel/examples/poisson-line-process/data 2026-02-09T00:53:44,026 creating build/bdist.linux-armv7l/wheel/examples/poisson-line-process/data/random 2026-02-09T00:53:44,028 copying build/lib/examples/poisson-line-process/data/random/data_random_1000.csv -> build/bdist.linux-armv7l/wheel/./examples/poisson-line-process/data/random 2026-02-09T00:53:44,034 creating build/bdist.linux-armv7l/wheel/examples/poisson-line-process/data/smt_100 2026-02-09T00:53:44,035 copying build/lib/examples/poisson-line-process/data/smt_100/data_smt_wh8_100.csv -> build/bdist.linux-armv7l/wheel/./examples/poisson-line-process/data/smt_100 2026-02-09T00:53:44,039 copying build/lib/examples/poisson-line-process/data/smt_100/data_smt_wh6_100.csv -> build/bdist.linux-armv7l/wheel/./examples/poisson-line-process/data/smt_100 2026-02-09T00:53:44,042 copying build/lib/examples/poisson-line-process/data/smt_100/data_smt_wh2_100.csv -> build/bdist.linux-armv7l/wheel/./examples/poisson-line-process/data/smt_100 2026-02-09T00:53:44,045 copying build/lib/examples/poisson-line-process/data/smt_100/data_smt_wh3_100.csv -> build/bdist.linux-armv7l/wheel/./examples/poisson-line-process/data/smt_100 2026-02-09T00:53:44,049 copying build/lib/examples/poisson-line-process/data/smt_100/data_smt_wh7_100.csv -> build/bdist.linux-armv7l/wheel/./examples/poisson-line-process/data/smt_100 2026-02-09T00:53:44,052 copying build/lib/examples/poisson-line-process/data/smt_100/data_smt_wh1_100.csv -> build/bdist.linux-armv7l/wheel/./examples/poisson-line-process/data/smt_100 2026-02-09T00:53:44,055 copying build/lib/examples/poisson-line-process/data/smt_100/data_smt_wh5_100.csv -> build/bdist.linux-armv7l/wheel/./examples/poisson-line-process/data/smt_100 2026-02-09T00:53:44,058 copying build/lib/examples/poisson-line-process/data/smt_100/data_smt_wh9_100.csv -> build/bdist.linux-armv7l/wheel/./examples/poisson-line-process/data/smt_100 2026-02-09T00:53:44,061 copying build/lib/examples/poisson-line-process/data/smt_100/data_smt_wh10_100.csv -> build/bdist.linux-armv7l/wheel/./examples/poisson-line-process/data/smt_100 2026-02-09T00:53:44,064 copying build/lib/examples/poisson-line-process/data/smt_100/data_smt_wh4_100.csv -> build/bdist.linux-armv7l/wheel/./examples/poisson-line-process/data/smt_100 2026-02-09T00:53:44,067 copying build/lib/examples/poisson-line-process/.gitignore -> build/bdist.linux-armv7l/wheel/./examples/poisson-line-process 2026-02-09T00:53:44,070 copying build/lib/examples/poisson-line-process/dag.dot -> build/bdist.linux-armv7l/wheel/./examples/poisson-line-process 2026-02-09T00:53:44,072 copying build/lib/examples/poisson-line-process/example_pure_python.py -> build/bdist.linux-armv7l/wheel/./examples/poisson-line-process 2026-02-09T00:53:44,075 copying build/lib/examples/.gitignore -> build/bdist.linux-armv7l/wheel/./examples 2026-02-09T00:53:44,078 creating build/bdist.linux-armv7l/wheel/examples/lr91 2026-02-09T00:53:44,080 copying build/lib/examples/lr91/README.md -> build/bdist.linux-armv7l/wheel/./examples/lr91 2026-02-09T00:53:44,082 copying build/lib/examples/lr91/dag.png -> build/bdist.linux-armv7l/wheel/./examples/lr91 2026-02-09T00:53:44,087 creating build/bdist.linux-armv7l/wheel/examples/lr91/data 2026-02-09T00:53:44,088 copying build/lib/examples/lr91/data/results.csv -> build/bdist.linux-armv7l/wheel/./examples/lr91/data 2026-02-09T00:53:44,092 copying build/lib/examples/lr91/data/normalised_results.csv -> build/bdist.linux-armv7l/wheel/./examples/lr91/data 2026-02-09T00:53:44,096 copying build/lib/examples/lr91/example_max_conductances.py -> build/bdist.linux-armv7l/wheel/./examples/lr91 2026-02-09T00:53:44,099 copying build/lib/examples/lr91/dag.dot -> build/bdist.linux-armv7l/wheel/./examples/lr91 2026-02-09T00:53:44,102 creating build/bdist.linux-armv7l/wheel/examples/covasim_ 2026-02-09T00:53:44,104 creating build/bdist.linux-armv7l/wheel/examples/covasim_/vaccinating_elderly 2026-02-09T00:53:44,106 copying build/lib/examples/covasim_/vaccinating_elderly/README.md -> build/bdist.linux-armv7l/wheel/./examples/covasim_/vaccinating_elderly 2026-02-09T00:53:44,109 copying build/lib/examples/covasim_/vaccinating_elderly/simulated_data.csv -> build/bdist.linux-armv7l/wheel/./examples/covasim_/vaccinating_elderly 2026-02-09T00:53:44,112 copying build/lib/examples/covasim_/vaccinating_elderly/dag.png -> build/bdist.linux-armv7l/wheel/./examples/covasim_/vaccinating_elderly 2026-02-09T00:53:44,115 copying build/lib/examples/covasim_/vaccinating_elderly/example_vaccine.py -> build/bdist.linux-armv7l/wheel/./examples/covasim_/vaccinating_elderly 2026-02-09T00:53:44,117 copying build/lib/examples/covasim_/vaccinating_elderly/dag.dot -> build/bdist.linux-armv7l/wheel/./examples/covasim_/vaccinating_elderly 2026-02-09T00:53:44,121 creating build/bdist.linux-armv7l/wheel/examples/covasim_/doubling_beta 2026-02-09T00:53:44,122 copying build/lib/examples/covasim_/doubling_beta/README.md -> build/bdist.linux-armv7l/wheel/./examples/covasim_/doubling_beta 2026-02-09T00:53:44,125 copying build/lib/examples/covasim_/doubling_beta/dag.png -> build/bdist.linux-armv7l/wheel/./examples/covasim_/doubling_beta 2026-02-09T00:53:44,128 creating build/bdist.linux-armv7l/wheel/examples/covasim_/doubling_beta/data 2026-02-09T00:53:44,130 copying build/lib/examples/covasim_/doubling_beta/data/low_contacts_avg_age_30.1.csv -> build/bdist.linux-armv7l/wheel/./examples/covasim_/doubling_beta/data 2026-02-09T00:53:44,143 copying build/lib/examples/covasim_/doubling_beta/data/10k_observational_data.csv -> build/bdist.linux-armv7l/wheel/./examples/covasim_/doubling_beta/data 2026-02-09T00:53:44,181 copying build/lib/examples/covasim_/doubling_beta/data/older_population.csv -> build/bdist.linux-armv7l/wheel/./examples/covasim_/doubling_beta/data 2026-02-09T00:53:44,203 copying build/lib/examples/covasim_/doubling_beta/data/high_contacts_avg_age_22.2.csv -> build/bdist.linux-armv7l/wheel/./examples/covasim_/doubling_beta/data 2026-02-09T00:53:44,215 copying build/lib/examples/covasim_/doubling_beta/data/low_contacts_avg_age_22.2.csv -> build/bdist.linux-armv7l/wheel/./examples/covasim_/doubling_beta/data 2026-02-09T00:53:44,228 copying build/lib/examples/covasim_/doubling_beta/data/younger_population.csv -> build/bdist.linux-armv7l/wheel/./examples/covasim_/doubling_beta/data 2026-02-09T00:53:44,249 copying build/lib/examples/covasim_/doubling_beta/data/high_contacts_avg_age_30.1.csv -> build/bdist.linux-armv7l/wheel/./examples/covasim_/doubling_beta/data 2026-02-09T00:53:44,261 copying build/lib/examples/covasim_/doubling_beta/example_beta.py -> build/bdist.linux-armv7l/wheel/./examples/covasim_/doubling_beta 2026-02-09T00:53:44,264 copying build/lib/examples/covasim_/doubling_beta/dag.dot -> build/bdist.linux-armv7l/wheel/./examples/covasim_/doubling_beta 2026-02-09T00:53:44,267 creating build/bdist.linux-armv7l/wheel/tests 2026-02-09T00:53:44,269 creating build/bdist.linux-armv7l/wheel/tests/estimation_tests 2026-02-09T00:53:44,270 copying build/lib/tests/estimation_tests/test_cubic_spline_estimator.py -> build/bdist.linux-armv7l/wheel/./tests/estimation_tests 2026-02-09T00:53:44,273 copying build/lib/tests/estimation_tests/test_ipcw_estimator.py -> build/bdist.linux-armv7l/wheel/./tests/estimation_tests 2026-02-09T00:53:44,275 copying build/lib/tests/estimation_tests/test_instrumental_variable_estimator.py -> build/bdist.linux-armv7l/wheel/./tests/estimation_tests 2026-02-09T00:53:44,278 copying build/lib/tests/estimation_tests/test_linear_regression_estimator.py -> build/bdist.linux-armv7l/wheel/./tests/estimation_tests 2026-02-09T00:53:44,281 copying build/lib/tests/estimation_tests/test_logistic_regression_estimator.py -> build/bdist.linux-armv7l/wheel/./tests/estimation_tests 2026-02-09T00:53:44,283 copying build/lib/tests/estimation_tests/test_experimental_estimator.py -> build/bdist.linux-armv7l/wheel/./tests/estimation_tests 2026-02-09T00:53:44,285 copying build/lib/tests/estimation_tests/test_genetic_programming_regression_fitter.py -> build/bdist.linux-armv7l/wheel/./tests/estimation_tests 2026-02-09T00:53:44,288 copying build/lib/tests/__init__.py -> build/bdist.linux-armv7l/wheel/./tests 2026-02-09T00:53:44,291 creating build/bdist.linux-armv7l/wheel/tests/testing_tests 2026-02-09T00:53:44,292 copying build/lib/tests/testing_tests/test_causal_test_adequacy.py -> build/bdist.linux-armv7l/wheel/./tests/testing_tests 2026-02-09T00:53:44,295 copying build/lib/tests/testing_tests/test_causal_effect.py -> build/bdist.linux-armv7l/wheel/./tests/testing_tests 2026-02-09T00:53:44,299 copying build/lib/tests/testing_tests/test_causal_test_case.py -> build/bdist.linux-armv7l/wheel/./tests/testing_tests 2026-02-09T00:53:44,302 copying build/lib/tests/testing_tests/test_metamorphic_relations.py -> build/bdist.linux-armv7l/wheel/./tests/testing_tests 2026-02-09T00:53:44,306 creating build/bdist.linux-armv7l/wheel/tests/main_tests 2026-02-09T00:53:44,308 copying build/lib/tests/main_tests/test_main.py -> build/bdist.linux-armv7l/wheel/./tests/main_tests 2026-02-09T00:53:44,312 creating build/bdist.linux-armv7l/wheel/tests/surrogate_tests 2026-02-09T00:53:44,313 copying build/lib/tests/surrogate_tests/test_causal_surrogate_assisted.py -> build/bdist.linux-armv7l/wheel/./tests/surrogate_tests 2026-02-09T00:53:44,317 creating build/bdist.linux-armv7l/wheel/tests/tutorial_tests 2026-02-09T00:53:44,318 copying build/lib/tests/tutorial_tests/test_tutorials.py -> build/bdist.linux-armv7l/wheel/./tests/tutorial_tests 2026-02-09T00:53:44,321 creating build/bdist.linux-armv7l/wheel/tests/resources 2026-02-09T00:53:44,324 creating build/bdist.linux-armv7l/wheel/tests/resources/data 2026-02-09T00:53:44,325 copying build/lib/tests/resources/data/data_with_categorical.csv -> build/bdist.linux-armv7l/wheel/./tests/resources/data 2026-02-09T00:53:44,328 copying build/lib/tests/resources/data/data.pqt -> build/bdist.linux-armv7l/wheel/./tests/resources/data 2026-02-09T00:53:44,330 copying build/lib/tests/resources/data/data.csv -> build/bdist.linux-armv7l/wheel/./tests/resources/data 2026-02-09T00:53:44,333 copying build/lib/tests/resources/data/dag.xml -> build/bdist.linux-armv7l/wheel/./tests/resources/data 2026-02-09T00:53:44,335 copying build/lib/tests/resources/data/temporal_data.csv -> build/bdist.linux-armv7l/wheel/./tests/resources/data 2026-02-09T00:53:44,337 copying build/lib/tests/resources/data/tests.json -> build/bdist.linux-armv7l/wheel/./tests/resources/data 2026-02-09T00:53:44,340 copying build/lib/tests/resources/data/nhefs.csv -> build/bdist.linux-armv7l/wheel/./tests/resources/data 2026-02-09T00:53:44,352 copying build/lib/tests/resources/data/scarf_data.csv -> build/bdist.linux-armv7l/wheel/./tests/resources/data 2026-02-09T00:53:44,355 copying build/lib/tests/resources/data/dag.dot -> build/bdist.linux-armv7l/wheel/./tests/resources/data 2026-02-09T00:53:44,358 copying build/lib/tests/resources/data/data_with_meta.csv -> build/bdist.linux-armv7l/wheel/./tests/resources/data 2026-02-09T00:53:44,361 creating build/bdist.linux-armv7l/wheel/tests/specification_tests 2026-02-09T00:53:44,362 copying build/lib/tests/specification_tests/test_causal_dag.py -> build/bdist.linux-armv7l/wheel/./tests/specification_tests 2026-02-09T00:53:44,366 copying build/lib/tests/specification_tests/test_variable.py -> build/bdist.linux-armv7l/wheel/./tests/specification_tests 2026-02-09T00:53:44,369 creating build/bdist.linux-armv7l/wheel/paper 2026-02-09T00:53:44,371 copying build/lib/paper/paper.md -> build/bdist.linux-armv7l/wheel/./paper 2026-02-09T00:53:44,374 copying build/lib/paper/paper.bib -> build/bdist.linux-armv7l/wheel/./paper 2026-02-09T00:53:44,376 running install_egg_info 2026-02-09T00:53:44,384 Copying causal_testing_framework.egg-info to build/bdist.linux-armv7l/wheel/./causal_testing_framework-14.0.0-py3.11.egg-info 2026-02-09T00:53:44,399 running install_scripts 2026-02-09T00:53:44,412 creating build/bdist.linux-armv7l/wheel/causal_testing_framework-14.0.0.dist-info/WHEEL 2026-02-09T00:53:44,415 creating '/tmp/pip-wheel-oeiwc3mk/.tmp-qd3z1lz9/causal_testing_framework-14.0.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-02-09T00:53:44,418 adding 'causal_testing/__init__.py' 2026-02-09T00:53:44,421 adding 'causal_testing/__main__.py' 2026-02-09T00:53:44,422 adding 'causal_testing/_version.py' 2026-02-09T00:53:44,427 adding 'causal_testing/main.py' 2026-02-09T00:53:44,429 adding 'causal_testing/estimation/__init__.py' 2026-02-09T00:53:44,431 adding 'causal_testing/estimation/abstract_estimator.py' 2026-02-09T00:53:44,433 adding 'causal_testing/estimation/abstract_regression_estimator.py' 2026-02-09T00:53:44,435 adding 'causal_testing/estimation/cubic_spline_estimator.py' 2026-02-09T00:53:44,436 adding 'causal_testing/estimation/effect_estimate.py' 2026-02-09T00:53:44,438 adding 'causal_testing/estimation/experimental_estimator.py' 2026-02-09T00:53:44,441 adding 'causal_testing/estimation/genetic_programming_regression_fitter.py' 2026-02-09T00:53:44,443 adding 'causal_testing/estimation/instrumental_variable_estimator.py' 2026-02-09T00:53:44,445 adding 'causal_testing/estimation/ipcw_estimator.py' 2026-02-09T00:53:44,448 adding 'causal_testing/estimation/linear_regression_estimator.py' 2026-02-09T00:53:44,449 adding 'causal_testing/estimation/logistic_regression_estimator.py' 2026-02-09T00:53:44,451 adding 'causal_testing/specification/__init__.py' 2026-02-09T00:53:44,455 adding 'causal_testing/specification/causal_dag.py' 2026-02-09T00:53:44,457 adding 'causal_testing/specification/scenario.py' 2026-02-09T00:53:44,459 adding 'causal_testing/specification/variable.py' 2026-02-09T00:53:44,461 adding 'causal_testing/surrogate/__init__.py' 2026-02-09T00:53:44,463 adding 'causal_testing/surrogate/causal_surrogate_assisted.py' 2026-02-09T00:53:44,464 adding 'causal_testing/surrogate/surrogate_search_algorithms.py' 2026-02-09T00:53:44,467 adding 'causal_testing/testing/__init__.py' 2026-02-09T00:53:44,468 adding 'causal_testing/testing/base_test_case.py' 2026-02-09T00:53:44,470 adding 'causal_testing/testing/causal_effect.py' 2026-02-09T00:53:44,472 adding 'causal_testing/testing/causal_test_adequacy.py' 2026-02-09T00:53:44,474 adding 'causal_testing/testing/causal_test_case.py' 2026-02-09T00:53:44,475 adding 'causal_testing/testing/causal_test_result.py' 2026-02-09T00:53:44,477 adding 'causal_testing/testing/effect.py' 2026-02-09T00:53:44,478 adding 'causal_testing/testing/intervention.py' 2026-02-09T00:53:44,481 adding 'causal_testing/testing/metamorphic_relation.py' 2026-02-09T00:53:44,483 adding 'causal_testing/utils/__init__.py' 2026-02-09T00:53:44,484 adding 'causal_testing/utils/validation.py' 2026-02-09T00:53:44,487 adding 'causal_testing_framework-14.0.0.dist-info/licenses/LICENSE' 2026-02-09T00:53:44,489 adding 'dafni/.dockerignore' 2026-02-09T00:53:44,491 adding 'dafni/.env' 2026-02-09T00:53:44,492 adding 'dafni/Dockerfile' 2026-02-09T00:53:44,494 adding 'dafni/README.md' 2026-02-09T00:53:44,495 adding 'dafni/docker-compose.yaml' 2026-02-09T00:53:44,497 adding 'dafni/entrypoint.sh' 2026-02-09T00:53:44,499 adding 'dafni/model_definition.yaml' 2026-02-09T00:53:44,502 adding 'dafni/data/inputs/causal-tests/causal_tests.json' 2026-02-09T00:53:44,504 adding 'dafni/data/inputs/dag-data/dag.dot' 2026-02-09T00:53:44,506 adding 'dafni/data/inputs/runtime-data/runtime_data.csv' 2026-02-09T00:53:44,509 adding 'dafni/data/outputs/causal_test_results.json' 2026-02-09T00:53:44,511 adding 'docs/Makefile' 2026-02-09T00:53:44,513 adding 'docs/README.md' 2026-02-09T00:53:44,514 adding 'docs/make.bat' 2026-02-09T00:53:44,517 adding 'docs/source/background.rst' 2026-02-09T00:53:44,519 adding 'docs/source/conf.py' 2026-02-09T00:53:44,520 adding 'docs/source/credits.rst' 2026-02-09T00:53:44,522 adding 'docs/source/glossary.rst' 2026-02-09T00:53:44,524 adding 'docs/source/index.rst' 2026-02-09T00:53:44,526 adding 'docs/source/installation.rst' 2026-02-09T00:53:44,528 adding 'docs/source/requirements.txt' 2026-02-09T00:53:44,529 adding 'docs/source/tutorials.rst' 2026-02-09T00:53:44,532 adding 'docs/source/_static/css/custom.css' 2026-02-09T00:53:44,537 adding 'docs/source/_static/images/CITCOM-logo-white.png' 2026-02-09T00:53:44,540 adding 'docs/source/_static/images/CITCOM-logo.png' 2026-02-09T00:53:44,556 adding 'docs/source/_static/images/Sheffield-logo.png' 2026-02-09T00:53:44,564 adding 'docs/source/_static/images/example_dag.png' 2026-02-09T00:53:44,567 adding 'docs/source/dev/actions_and_webhooks.rst' 2026-02-09T00:53:44,587 adding 'docs/source/dev/documentation.rst' 2026-02-09T00:53:44,588 adding 'docs/source/dev/version_release.rst' 2026-02-09T00:53:44,591 adding 'docs/source/modules/causal_specification.rst' 2026-02-09T00:53:44,593 adding 'docs/source/modules/causal_testing.rst' 2026-02-09T00:53:44,595 adding 'docs/source/modules/estimators.rst' 2026-02-09T00:53:44,608 adding 'docs/source/tutorials/poisson_line_process/causal_tests.json' 2026-02-09T00:53:44,609 adding 'docs/source/tutorials/poisson_line_process/dag.dot' 2026-02-09T00:53:44,617 adding 'docs/source/tutorials/poisson_line_process/dag.png' 2026-02-09T00:53:44,639 adding 'docs/source/tutorials/poisson_line_process/poisson_line_process_tutorial.ipynb' 2026-02-09T00:53:44,689 adding 'docs/source/tutorials/poisson_line_process/data/random/data_random_1000.csv' 2026-02-09T00:53:44,692 adding 'docs/source/tutorials/vaccinating_elderly/causal_test_results.json' 2026-02-09T00:53:44,694 adding 'docs/source/tutorials/vaccinating_elderly/causal_tests.json' 2026-02-09T00:53:44,695 adding 'docs/source/tutorials/vaccinating_elderly/dag.dot' 2026-02-09T00:53:44,699 adding 'docs/source/tutorials/vaccinating_elderly/dag_image.png' 2026-02-09T00:53:44,701 adding 'docs/source/tutorials/vaccinating_elderly/simulated_data.csv' 2026-02-09T00:53:44,703 adding 'docs/source/tutorials/vaccinating_elderly/vaccinating_elderly_tutorial.ipynb' 2026-02-09T00:53:44,858 adding 'docs/source/tutorials/visualising_causal_test_results/visualise_causal_test_results.ipynb' 2026-02-09T00:53:44,882 adding 'examples/.gitignore' 2026-02-09T00:53:44,885 adding 'examples/covasim_/doubling_beta/README.md' 2026-02-09T00:53:44,887 adding 'examples/covasim_/doubling_beta/dag.dot' 2026-02-09T00:53:44,891 adding 'examples/covasim_/doubling_beta/dag.png' 2026-02-09T00:53:44,907 adding 'examples/covasim_/doubling_beta/example_beta.py' 2026-02-09T00:53:45,241 adding 'examples/covasim_/doubling_beta/data/10k_observational_data.csv' 2026-02-09T00:53:45,301 adding 'examples/covasim_/doubling_beta/data/high_contacts_avg_age_22.2.csv' 2026-02-09T00:53:45,352 adding 'examples/covasim_/doubling_beta/data/high_contacts_avg_age_30.1.csv' 2026-02-09T00:53:45,405 adding 'examples/covasim_/doubling_beta/data/low_contacts_avg_age_22.2.csv' 2026-02-09T00:53:45,459 adding 'examples/covasim_/doubling_beta/data/low_contacts_avg_age_30.1.csv' 2026-02-09T00:53:45,562 adding 'examples/covasim_/doubling_beta/data/older_population.csv' 2026-02-09T00:53:45,669 adding 'examples/covasim_/doubling_beta/data/younger_population.csv' 2026-02-09T00:53:45,675 adding 'examples/covasim_/vaccinating_elderly/README.md' 2026-02-09T00:53:45,677 adding 'examples/covasim_/vaccinating_elderly/dag.dot' 2026-02-09T00:53:45,681 adding 'examples/covasim_/vaccinating_elderly/dag.png' 2026-02-09T00:53:45,683 adding 'examples/covasim_/vaccinating_elderly/example_vaccine.py' 2026-02-09T00:53:45,685 adding 'examples/covasim_/vaccinating_elderly/simulated_data.csv' 2026-02-09T00:53:45,687 adding 'examples/lr91/README.md' 2026-02-09T00:53:45,689 adding 'examples/lr91/dag.dot' 2026-02-09T00:53:45,701 adding 'examples/lr91/dag.png' 2026-02-09T00:53:45,703 adding 'examples/lr91/example_max_conductances.py' 2026-02-09T00:53:45,714 adding 'examples/lr91/data/normalised_results.csv' 2026-02-09T00:53:45,725 adding 'examples/lr91/data/results.csv' 2026-02-09T00:53:45,727 adding 'examples/poisson-line-process/.gitignore' 2026-02-09T00:53:45,729 adding 'examples/poisson-line-process/README.md' 2026-02-09T00:53:45,731 adding 'examples/poisson-line-process/causal_tests.json' 2026-02-09T00:53:45,732 adding 'examples/poisson-line-process/dag.dot' 2026-02-09T00:53:45,740 adding 'examples/poisson-line-process/dag.png' 2026-02-09T00:53:45,742 adding 'examples/poisson-line-process/example_pure_python.py' 2026-02-09T00:53:45,746 adding 'examples/poisson-line-process/poisson_line_process.ipynb' 2026-02-09T00:53:45,776 adding 'examples/poisson-line-process/data/random/data_random_1000.csv' 2026-02-09T00:53:45,780 adding 'examples/poisson-line-process/data/smt_100/data_smt_wh10_100.csv' 2026-02-09T00:53:45,784 adding 'examples/poisson-line-process/data/smt_100/data_smt_wh1_100.csv' 2026-02-09T00:53:45,787 adding 'examples/poisson-line-process/data/smt_100/data_smt_wh2_100.csv' 2026-02-09T00:53:45,790 adding 'examples/poisson-line-process/data/smt_100/data_smt_wh3_100.csv' 2026-02-09T00:53:45,794 adding 'examples/poisson-line-process/data/smt_100/data_smt_wh4_100.csv' 2026-02-09T00:53:45,797 adding 'examples/poisson-line-process/data/smt_100/data_smt_wh5_100.csv' 2026-02-09T00:53:45,801 adding 'examples/poisson-line-process/data/smt_100/data_smt_wh6_100.csv' 2026-02-09T00:53:45,805 adding 'examples/poisson-line-process/data/smt_100/data_smt_wh7_100.csv' 2026-02-09T00:53:45,809 adding 'examples/poisson-line-process/data/smt_100/data_smt_wh8_100.csv' 2026-02-09T00:53:45,813 adding 'examples/poisson-line-process/data/smt_100/data_smt_wh9_100.csv' 2026-02-09T00:53:45,815 adding 'images/.gitignore' 2026-02-09T00:53:45,819 adding 'images/schematic-dark.png' 2026-02-09T00:53:45,823 adding 'images/schematic.png' 2026-02-09T00:53:45,825 adding 'images/schematic.tex' 2026-02-09T00:53:45,827 adding 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