2026-02-09T13:38:43,150 Created temporary directory: /tmp/pip-ephem-wheel-cache-asu__8vj
2026-02-09T13:38:43,153 Created temporary directory: /tmp/pip-build-tracker-q7_bcr4h
2026-02-09T13:38:43,154 Initialized build tracking at /tmp/pip-build-tracker-q7_bcr4h
2026-02-09T13:38:43,155 Created build tracker: /tmp/pip-build-tracker-q7_bcr4h
2026-02-09T13:38:43,155 Entered build tracker: /tmp/pip-build-tracker-q7_bcr4h
2026-02-09T13:38:43,157 Created temporary directory: /tmp/pip-wheel-uvcaz9_8
2026-02-09T13:38:43,160 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-02-09T13:38:43,176 Created temporary directory: /tmp/pip-ephem-wheel-cache-n0e_q6p2
2026-02-09T13:38:43,237 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-02-09T13:38:43,242 2 location(s) to search for versions of ragbio:
2026-02-09T13:38:43,242 * https://pypi.org/simple/ragbio/
2026-02-09T13:38:43,242 * https://www.piwheels.org/simple/ragbio/
2026-02-09T13:38:43,243 Fetching project page and analyzing links: https://pypi.org/simple/ragbio/
2026-02-09T13:38:43,244 Getting page https://pypi.org/simple/ragbio/
2026-02-09T13:38:43,245 Found index url https://pypi.org/simple
2026-02-09T13:38:43,532 Fetched page https://pypi.org/simple/ragbio/ as application/vnd.pypi.simple.v1+json
2026-02-09T13:38:43,537   Skipping link: No binaries permitted for ragbio: https://files.pythonhosted.org/packages/49/ef/b76938c77f3c7b1ea66f2f25e49ae4b169e1f8050de61183a14e6ac4d4fe/ragbio-0.1.12-py3-none-any.whl (from https://pypi.org/simple/ragbio/) (requires-python:>=3.9)
2026-02-09T13:38:43,538   Found link https://files.pythonhosted.org/packages/34/53/62f7f4e6ea6e004f8ef0bcfe3006736331f55847fa6dea5ab395b84f1663/ragbio-0.1.12.tar.gz (from https://pypi.org/simple/ragbio/) (requires-python:>=3.9), version: 0.1.12
2026-02-09T13:38:43,539   Skipping link: No binaries permitted for ragbio: https://files.pythonhosted.org/packages/dc/24/2258809d9b74a8ca4f242fff2e0710b7bf4931298e52997448b7aa979848/ragbio-0.1.13-py3-none-any.whl (from https://pypi.org/simple/ragbio/) (requires-python:>=3.9)
2026-02-09T13:38:43,540   Found link https://files.pythonhosted.org/packages/88/6a/2ec5f1bd89c003be226c58beb02fac2d381fbf82e0431448569082feccf9/ragbio-0.1.13.tar.gz (from https://pypi.org/simple/ragbio/) (requires-python:>=3.9), version: 0.1.13
2026-02-09T13:38:43,542   Skipping link: No binaries permitted for ragbio: https://files.pythonhosted.org/packages/c7/a8/c7101107c29a737cc4ccca14f007fd24cb580c12efe4ab2cb20485ec68b5/ragbio-0.1.14-py3-none-any.whl (from https://pypi.org/simple/ragbio/) (requires-python:>=3.9)
2026-02-09T13:38:43,543   Found link https://files.pythonhosted.org/packages/65/46/d81d49123a6d72d33a8dc738cd291840dbb0364981934eed92b812593784/ragbio-0.1.14.tar.gz (from https://pypi.org/simple/ragbio/) (requires-python:>=3.9), version: 0.1.14
2026-02-09T13:38:43,546   Skipping link: No binaries permitted for ragbio: https://files.pythonhosted.org/packages/53/fc/e8d2981a19d57c4d3f6b02fb0d17894a566a27f823271a16f359590ca575/ragbio-0.1.15-py3-none-any.whl (from https://pypi.org/simple/ragbio/) (requires-python:>=3.9)
2026-02-09T13:38:43,547   Found link https://files.pythonhosted.org/packages/b2/6a/ce7400e812f3b729d6f96ee55e4be82e0dd7e94436eceb720202605d21c2/ragbio-0.1.15.tar.gz (from https://pypi.org/simple/ragbio/) (requires-python:>=3.9), version: 0.1.15
2026-02-09T13:38:43,549   Skipping link: No binaries permitted for ragbio: https://files.pythonhosted.org/packages/a7/3b/51d94164ad35f46f891a280570a132a1b2ce41b92213a3379b69491f2f88/ragbio-0.1.16-py3-none-any.whl (from https://pypi.org/simple/ragbio/) (requires-python:>=3.9)
2026-02-09T13:38:43,550   Found link https://files.pythonhosted.org/packages/26/55/7d03382697209683443eb141bf3c21588ebe369c159e06905f55542f2760/ragbio-0.1.16.tar.gz (from https://pypi.org/simple/ragbio/) (requires-python:>=3.9), version: 0.1.16
2026-02-09T13:38:43,553   Skipping link: No binaries permitted for ragbio: https://files.pythonhosted.org/packages/74/03/69e8d6eff4b946927ac368525c9e582f292b280caf1fb96e049c9c782eb0/ragbio-0.1.18-py3-none-any.whl (from https://pypi.org/simple/ragbio/) (requires-python:>=3.11)
2026-02-09T13:38:43,557   Found link https://files.pythonhosted.org/packages/04/1b/9277623cfdbcf56500c5eb16bd106aac8166b3cfdbafc603c4e43fe9037b/ragbio-0.1.18.tar.gz (from https://pypi.org/simple/ragbio/) (requires-python:>=3.11), version: 0.1.18
2026-02-09T13:38:43,559   Skipping link: No binaries permitted for ragbio: https://files.pythonhosted.org/packages/49/dd/c6f5be435b421e56629a776c577c254e7df3ad6611834a79c6316fcee623/ragbio-0.2.0-py3-none-any.whl (from https://pypi.org/simple/ragbio/) (requires-python:>=3.9)
2026-02-09T13:38:43,560   Found link https://files.pythonhosted.org/packages/fe/46/ff2fc5045df43573db716965a6da68f2b57ac8580a48fb653be837f562e6/ragbio-0.2.0.tar.gz (from https://pypi.org/simple/ragbio/) (requires-python:>=3.9), version: 0.2.0
2026-02-09T13:38:43,564   Skipping link: No binaries permitted for ragbio: https://files.pythonhosted.org/packages/28/c2/59f3446423af971cdf980f107bcb2cd6e78e1fe81d9a6079cf819ee20ffa/ragbio-2.0.1-py3-none-any.whl (from https://pypi.org/simple/ragbio/) (requires-python:>=3.11)
2026-02-09T13:38:43,566   Found link https://files.pythonhosted.org/packages/b4/a7/26c71fc43bf98b004b453f5c5cda94a91ab2363212e8b152b583579b1d17/ragbio-2.0.1.tar.gz (from https://pypi.org/simple/ragbio/) (requires-python:>=3.11), version: 2.0.1
2026-02-09T13:38:43,567 Fetching project page and analyzing links: https://www.piwheels.org/simple/ragbio/
2026-02-09T13:38:43,568 Getting page https://www.piwheels.org/simple/ragbio/
2026-02-09T13:38:43,569 Found index url https://www.piwheels.org/simple
2026-02-09T13:38:43,782 Fetched page https://www.piwheels.org/simple/ragbio/ as text/html
2026-02-09T13:38:43,785   Skipping link: No binaries permitted for ragbio: https://www.piwheels.org/simple/ragbio/ragbio-0.2.0-py3-none-any.whl#sha256=e28b71bf95506762d0bf01cb5d29e25e0cf70da81a2021dfc23c5b4ac4bcca14 (from https://www.piwheels.org/simple/ragbio/) (requires-python:>=3.9)
2026-02-09T13:38:43,786   Skipping link: No binaries permitted for ragbio: https://www.piwheels.org/simple/ragbio/ragbio-0.1.16-py3-none-any.whl#sha256=d781caa34817f9d0f8a47fec3f0f2b5015b0586fe74e3d8f45e9d0b76636f8b7 (from https://www.piwheels.org/simple/ragbio/) (requires-python:>=3.9)
2026-02-09T13:38:43,787   Skipping link: No binaries permitted for ragbio: https://www.piwheels.org/simple/ragbio/ragbio-0.1.15-py3-none-any.whl#sha256=3ae98be8655aa5cd890af15b5bf3901b7ccc736fa1b76f4a4ff348439916e636 (from https://www.piwheels.org/simple/ragbio/) (requires-python:>=3.9)
2026-02-09T13:38:43,788   Skipping link: No binaries permitted for ragbio: https://www.piwheels.org/simple/ragbio/ragbio-0.1.14-py3-none-any.whl#sha256=d47c12cf3a49dcfab39564a7c345d8236e15c6aab1877957c897d7483cbf47f9 (from https://www.piwheels.org/simple/ragbio/) (requires-python:>=3.9)
2026-02-09T13:38:43,789   Skipping link: No binaries permitted for ragbio: https://www.piwheels.org/simple/ragbio/ragbio-0.1.13-py3-none-any.whl#sha256=912866e12d366e61f3649d8b9072c4b60371a424bb5c6890f10ca07a27263b17 (from https://www.piwheels.org/simple/ragbio/) (requires-python:>=3.9)
2026-02-09T13:38:43,789   Skipping link: No binaries permitted for ragbio: https://www.piwheels.org/simple/ragbio/ragbio-0.1.12-py3-none-any.whl#sha256=1342160fe2f337fa22045a27acec4b081fa922939b65d47324ece873fd3618be (from https://www.piwheels.org/simple/ragbio/) (requires-python:>=3.9)
2026-02-09T13:38:43,790 Skipping link: not a file: https://www.piwheels.org/simple/ragbio/
2026-02-09T13:38:43,791 Skipping link: not a file: https://pypi.org/simple/ragbio/
2026-02-09T13:38:43,817 Given no hashes to check 1 links for project 'ragbio': discarding no candidates
2026-02-09T13:38:43,840 Collecting ragbio==2.0.1
2026-02-09T13:38:43,843   Created temporary directory: /tmp/pip-unpack-phb0p_qv
2026-02-09T13:38:44,045   Downloading ragbio-2.0.1.tar.gz (171 kB)
2026-02-09T13:38:44,288   Added ragbio==2.0.1 from https://files.pythonhosted.org/packages/b4/a7/26c71fc43bf98b004b453f5c5cda94a91ab2363212e8b152b583579b1d17/ragbio-2.0.1.tar.gz to build tracker '/tmp/pip-build-tracker-q7_bcr4h'
2026-02-09T13:38:44,294   Created temporary directory: /tmp/pip-build-env-e5e8h061
2026-02-09T13:38:44,309   Installing build dependencies: started
2026-02-09T13:38:44,310   Running command pip subprocess to install build dependencies
2026-02-09T13:38:46,184   Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11)
2026-02-09T13:38:47,261   DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-02-09T13:38:47,318   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-02-09T13:38:49,980   Collecting setuptools>=61.0
2026-02-09T13:38:50,004     Using cached setuptools-82.0.0-py3-none-any.whl (1.0 MB)
2026-02-09T13:38:50,437   Collecting wheel
2026-02-09T13:38:50,487     Using cached https://www.piwheels.org/simple/wheel/wheel-0.46.3-py3-none-any.whl (30 kB)
2026-02-09T13:38:50,842   Collecting packaging>=24.0
2026-02-09T13:38:50,873     Using cached https://www.piwheels.org/simple/packaging/packaging-26.0-py3-none-any.whl (74 kB)
2026-02-09T13:38:55,440   Installing collected packages: setuptools, packaging, wheel
2026-02-09T13:39:00,094     Creating /tmp/pip-build-env-e5e8h061/overlay/local/bin
2026-02-09T13:39:00,097     changing mode of /tmp/pip-build-env-e5e8h061/overlay/local/bin/wheel to 755
2026-02-09T13:39:00,123   Successfully installed packaging-26.0 setuptools-82.0.0 wheel-0.46.3
2026-02-09T13:39:00,533   Installing build dependencies: finished with status 'done'
2026-02-09T13:39:00,541   Getting requirements to build wheel: started
2026-02-09T13:39:00,543   Running command Getting requirements to build wheel
2026-02-09T13:39:01,462   /tmp/pip-build-env-e5e8h061/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated
2026-02-09T13:39:01,462   !!

2026-02-09T13:39:01,464           ********************************************************************************
2026-02-09T13:39:01,465           Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0).

2026-02-09T13:39:01,466           By 2027-Feb-18, you need to update your project and remove deprecated calls
2026-02-09T13:39:01,467           or your builds will no longer be supported.

2026-02-09T13:39:01,468           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-02-09T13:39:01,469           ********************************************************************************

2026-02-09T13:39:01,471   !!
2026-02-09T13:39:01,471     corresp(dist, value, root_dir)
2026-02-09T13:39:01,601   running egg_info
2026-02-09T13:39:01,609   writing ragbio.egg-info/PKG-INFO
2026-02-09T13:39:01,614   writing dependency_links to ragbio.egg-info/dependency_links.txt
2026-02-09T13:39:01,617   writing requirements to ragbio.egg-info/requires.txt
2026-02-09T13:39:01,619   writing top-level names to ragbio.egg-info/top_level.txt
2026-02-09T13:39:01,652   reading manifest file 'ragbio.egg-info/SOURCES.txt'
2026-02-09T13:39:01,656   reading manifest template 'MANIFEST.in'
2026-02-09T13:39:01,658   adding license file 'LICENSE'
2026-02-09T13:39:01,662   writing manifest file 'ragbio.egg-info/SOURCES.txt'
2026-02-09T13:39:01,790   Getting requirements to build wheel: finished with status 'done'
2026-02-09T13:39:01,794   Created temporary directory: /tmp/pip-modern-metadata-37n8qc12
2026-02-09T13:39:01,797   Preparing metadata (pyproject.toml): started
2026-02-09T13:39:01,799   Running command Preparing metadata (pyproject.toml)
2026-02-09T13:39:02,685   /tmp/pip-build-env-e5e8h061/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated
2026-02-09T13:39:02,686   !!

2026-02-09T13:39:02,687           ********************************************************************************
2026-02-09T13:39:02,688           Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0).

2026-02-09T13:39:02,689           By 2027-Feb-18, you need to update your project and remove deprecated calls
2026-02-09T13:39:02,689           or your builds will no longer be supported.

2026-02-09T13:39:02,691           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-02-09T13:39:02,691           ********************************************************************************

2026-02-09T13:39:02,693   !!
2026-02-09T13:39:02,694     corresp(dist, value, root_dir)
2026-02-09T13:39:02,886   running dist_info
2026-02-09T13:39:02,927   creating /tmp/pip-modern-metadata-37n8qc12/ragbio.egg-info
2026-02-09T13:39:02,928   writing /tmp/pip-modern-metadata-37n8qc12/ragbio.egg-info/PKG-INFO
2026-02-09T13:39:02,933   writing dependency_links to /tmp/pip-modern-metadata-37n8qc12/ragbio.egg-info/dependency_links.txt
2026-02-09T13:39:02,935   writing requirements to /tmp/pip-modern-metadata-37n8qc12/ragbio.egg-info/requires.txt
2026-02-09T13:39:02,937   writing top-level names to /tmp/pip-modern-metadata-37n8qc12/ragbio.egg-info/top_level.txt
2026-02-09T13:39:02,939   writing manifest file '/tmp/pip-modern-metadata-37n8qc12/ragbio.egg-info/SOURCES.txt'
2026-02-09T13:39:02,967   reading manifest file '/tmp/pip-modern-metadata-37n8qc12/ragbio.egg-info/SOURCES.txt'
2026-02-09T13:39:02,969   reading manifest template 'MANIFEST.in'
2026-02-09T13:39:02,971   adding license file 'LICENSE'
2026-02-09T13:39:02,974   writing manifest file '/tmp/pip-modern-metadata-37n8qc12/ragbio.egg-info/SOURCES.txt'
2026-02-09T13:39:02,976   creating '/tmp/pip-modern-metadata-37n8qc12/ragbio-2.0.1.dist-info'
2026-02-09T13:39:03,175   Preparing metadata (pyproject.toml): finished with status 'done'
2026-02-09T13:39:03,182   Source in /tmp/pip-wheel-uvcaz9_8/ragbio_fcec2d2284154768bd17399518e2d22c has version 2.0.1, which satisfies requirement ragbio==2.0.1 from https://files.pythonhosted.org/packages/b4/a7/26c71fc43bf98b004b453f5c5cda94a91ab2363212e8b152b583579b1d17/ragbio-2.0.1.tar.gz
2026-02-09T13:39:03,183   Removed ragbio==2.0.1 from https://files.pythonhosted.org/packages/b4/a7/26c71fc43bf98b004b453f5c5cda94a91ab2363212e8b152b583579b1d17/ragbio-2.0.1.tar.gz from build tracker '/tmp/pip-build-tracker-q7_bcr4h'
2026-02-09T13:39:03,206 Created temporary directory: /tmp/pip-unpack-buvwxq96
2026-02-09T13:39:03,206 Building wheels for collected packages: ragbio
2026-02-09T13:39:03,212   Created temporary directory: /tmp/pip-wheel-unw7qpxo
2026-02-09T13:39:03,212   Destination directory: /tmp/pip-wheel-unw7qpxo
2026-02-09T13:39:03,215   Building wheel for ragbio (pyproject.toml): started
2026-02-09T13:39:03,217   Running command Building wheel for ragbio (pyproject.toml)
2026-02-09T13:39:04,162   /tmp/pip-build-env-e5e8h061/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated
2026-02-09T13:39:04,162   !!

2026-02-09T13:39:04,164           ********************************************************************************
2026-02-09T13:39:04,165           Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0).

2026-02-09T13:39:04,167           By 2027-Feb-18, you need to update your project and remove deprecated calls
2026-02-09T13:39:04,167           or your builds will no longer be supported.

2026-02-09T13:39:04,169           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-02-09T13:39:04,169           ********************************************************************************

2026-02-09T13:39:04,171   !!
2026-02-09T13:39:04,171     corresp(dist, value, root_dir)
2026-02-09T13:39:04,321   running bdist_wheel
2026-02-09T13:39:04,343   running build
2026-02-09T13:39:04,344   running build_py
2026-02-09T13:39:04,352   creating build/lib/ragbio
2026-02-09T13:39:04,355   copying ragbio/__init__.py -> build/lib/ragbio
2026-02-09T13:39:04,358   copying ragbio/config.py -> build/lib/ragbio
2026-02-09T13:39:04,362   creating build/lib/ragbio/pipeline
2026-02-09T13:39:04,364   copying ragbio/pipeline/rag_pipeline.py -> build/lib/ragbio/pipeline
2026-02-09T13:39:04,367   copying ragbio/pipeline/__init__.py -> build/lib/ragbio/pipeline
2026-02-09T13:39:04,371   creating build/lib/ragbio/knowledge_graph
2026-02-09T13:39:04,372   copying ragbio/knowledge_graph/__init__.py -> build/lib/ragbio/knowledge_graph
2026-02-09T13:39:04,375   copying ragbio/knowledge_graph/structured_drug_kg.py -> build/lib/ragbio/knowledge_graph
2026-02-09T13:39:04,378   creating build/lib/ragbio/utils
2026-02-09T13:39:04,380   copying ragbio/utils/__init__.py -> build/lib/ragbio/utils
2026-02-09T13:39:04,382   copying ragbio/utils/rag_data_loader.py -> build/lib/ragbio/utils
2026-02-09T13:39:04,386   copying ragbio/utils/update_config.py -> build/lib/ragbio/utils
2026-02-09T13:39:04,389   creating build/lib/ragbio/embeddings
2026-02-09T13:39:04,391   copying ragbio/embeddings/embedding_engine.py -> build/lib/ragbio/embeddings
2026-02-09T13:39:04,394   copying ragbio/embeddings/__init__.py -> build/lib/ragbio/embeddings
2026-02-09T13:39:04,396   running egg_info
2026-02-09T13:39:04,409   writing ragbio.egg-info/PKG-INFO
2026-02-09T13:39:04,413   writing dependency_links to ragbio.egg-info/dependency_links.txt
2026-02-09T13:39:04,415   writing requirements to ragbio.egg-info/requires.txt
2026-02-09T13:39:04,417   writing top-level names to ragbio.egg-info/top_level.txt
2026-02-09T13:39:04,435   reading manifest file 'ragbio.egg-info/SOURCES.txt'
2026-02-09T13:39:04,439   reading manifest template 'MANIFEST.in'
2026-02-09T13:39:04,441   adding license file 'LICENSE'
2026-02-09T13:39:04,445   writing manifest file 'ragbio.egg-info/SOURCES.txt'
2026-02-09T13:39:04,452   creating build/lib/ragbio/images
2026-02-09T13:39:04,454   copying ragbio/images/network_graph.png -> build/lib/ragbio/images
2026-02-09T13:39:04,475   installing to build/bdist.linux-armv7l/wheel
2026-02-09T13:39:04,476   running install
2026-02-09T13:39:04,502   running install_lib
2026-02-09T13:39:04,527   creating build/bdist.linux-armv7l/wheel
2026-02-09T13:39:04,530   creating build/bdist.linux-armv7l/wheel/ragbio
2026-02-09T13:39:04,532   creating build/bdist.linux-armv7l/wheel/ragbio/images
2026-02-09T13:39:04,534   copying build/lib/ragbio/images/network_graph.png -> build/bdist.linux-armv7l/wheel/./ragbio/images
2026-02-09T13:39:04,541   copying build/lib/ragbio/__init__.py -> build/bdist.linux-armv7l/wheel/./ragbio
2026-02-09T13:39:04,544   creating build/bdist.linux-armv7l/wheel/ragbio/pipeline
2026-02-09T13:39:04,546   copying build/lib/ragbio/pipeline/rag_pipeline.py -> build/bdist.linux-armv7l/wheel/./ragbio/pipeline
2026-02-09T13:39:04,549   copying build/lib/ragbio/pipeline/__init__.py -> build/bdist.linux-armv7l/wheel/./ragbio/pipeline
2026-02-09T13:39:04,552   copying build/lib/ragbio/config.py -> build/bdist.linux-armv7l/wheel/./ragbio
2026-02-09T13:39:04,555   creating build/bdist.linux-armv7l/wheel/ragbio/knowledge_graph
2026-02-09T13:39:04,556   copying build/lib/ragbio/knowledge_graph/__init__.py -> build/bdist.linux-armv7l/wheel/./ragbio/knowledge_graph
2026-02-09T13:39:04,559   copying build/lib/ragbio/knowledge_graph/structured_drug_kg.py -> build/bdist.linux-armv7l/wheel/./ragbio/knowledge_graph
2026-02-09T13:39:04,562   creating build/bdist.linux-armv7l/wheel/ragbio/utils
2026-02-09T13:39:04,564   copying build/lib/ragbio/utils/__init__.py -> build/bdist.linux-armv7l/wheel/./ragbio/utils
2026-02-09T13:39:04,566   copying build/lib/ragbio/utils/rag_data_loader.py -> build/bdist.linux-armv7l/wheel/./ragbio/utils
2026-02-09T13:39:04,570   copying build/lib/ragbio/utils/update_config.py -> build/bdist.linux-armv7l/wheel/./ragbio/utils
2026-02-09T13:39:04,574   creating build/bdist.linux-armv7l/wheel/ragbio/embeddings
2026-02-09T13:39:04,576   copying build/lib/ragbio/embeddings/embedding_engine.py -> build/bdist.linux-armv7l/wheel/./ragbio/embeddings
2026-02-09T13:39:04,580   copying build/lib/ragbio/embeddings/__init__.py -> build/bdist.linux-armv7l/wheel/./ragbio/embeddings
2026-02-09T13:39:04,582   running install_egg_info
2026-02-09T13:39:04,588   Copying ragbio.egg-info to build/bdist.linux-armv7l/wheel/./ragbio-2.0.1-py3.11.egg-info
2026-02-09T13:39:04,601   running install_scripts
2026-02-09T13:39:04,614   creating build/bdist.linux-armv7l/wheel/ragbio-2.0.1.dist-info/WHEEL
2026-02-09T13:39:04,618   creating '/tmp/pip-wheel-unw7qpxo/.tmp-35ykmop3/ragbio-2.0.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2026-02-09T13:39:04,621   adding 'ragbio/__init__.py'
2026-02-09T13:39:04,623   adding 'ragbio/config.py'
2026-02-09T13:39:04,626   adding 'ragbio/embeddings/__init__.py'
2026-02-09T13:39:04,628   adding 'ragbio/embeddings/embedding_engine.py'
2026-02-09T13:39:04,650   adding 'ragbio/images/network_graph.png'
2026-02-09T13:39:04,653   adding 'ragbio/knowledge_graph/__init__.py'
2026-02-09T13:39:04,655   adding 'ragbio/knowledge_graph/structured_drug_kg.py'
2026-02-09T13:39:04,657   adding 'ragbio/pipeline/__init__.py'
2026-02-09T13:39:04,660   adding 'ragbio/pipeline/rag_pipeline.py'
2026-02-09T13:39:04,663   adding 'ragbio/utils/__init__.py'
2026-02-09T13:39:04,666   adding 'ragbio/utils/rag_data_loader.py'
2026-02-09T13:39:04,668   adding 'ragbio/utils/update_config.py'
2026-02-09T13:39:04,671   adding 'ragbio-2.0.1.dist-info/licenses/LICENSE'
2026-02-09T13:39:04,674   adding 'ragbio-2.0.1.dist-info/METADATA'
2026-02-09T13:39:04,676   adding 'ragbio-2.0.1.dist-info/WHEEL'
2026-02-09T13:39:04,677   adding 'ragbio-2.0.1.dist-info/top_level.txt'
2026-02-09T13:39:04,679   adding 'ragbio-2.0.1.dist-info/RECORD'
2026-02-09T13:39:04,684   removing build/bdist.linux-armv7l/wheel
2026-02-09T13:39:04,823   Building wheel for ragbio (pyproject.toml): finished with status 'done'
2026-02-09T13:39:04,834   Created wheel for ragbio: filename=ragbio-2.0.1-py3-none-any.whl size=164154 sha256=ebc0571773bcf6e7fe57245944733d8f521c76b5d48d4f47d62a741f35d22b88
2026-02-09T13:39:04,835   Stored in directory: /tmp/pip-ephem-wheel-cache-n0e_q6p2/wheels/9e/a3/cb/5706614a1224998231f3980e4616741b586b9f71c442226e0f
2026-02-09T13:39:04,867 Successfully built ragbio
2026-02-09T13:39:04,878 Removed build tracker: '/tmp/pip-build-tracker-q7_bcr4h'