2026-02-10T06:42:49,588 Created temporary directory: /tmp/pip-ephem-wheel-cache-nkwgzf5h 2026-02-10T06:42:49,590 Created temporary directory: /tmp/pip-build-tracker-hwkxpux4 2026-02-10T06:42:49,590 Initialized build tracking at /tmp/pip-build-tracker-hwkxpux4 2026-02-10T06:42:49,591 Created build tracker: /tmp/pip-build-tracker-hwkxpux4 2026-02-10T06:42:49,591 Entered build tracker: /tmp/pip-build-tracker-hwkxpux4 2026-02-10T06:42:49,592 Created temporary directory: /tmp/pip-wheel-sy_brx00 2026-02-10T06:42:49,595 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-02-10T06:42:49,597 Created temporary directory: /tmp/pip-ephem-wheel-cache-8h66xuiy 2026-02-10T06:42:49,619 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-02-10T06:42:49,622 2 location(s) to search for versions of pystack3d: 2026-02-10T06:42:49,622 * https://pypi.org/simple/pystack3d/ 2026-02-10T06:42:49,622 * https://www.piwheels.org/simple/pystack3d/ 2026-02-10T06:42:49,623 Fetching project page and analyzing links: https://pypi.org/simple/pystack3d/ 2026-02-10T06:42:49,623 Getting page https://pypi.org/simple/pystack3d/ 2026-02-10T06:42:49,625 Found index url https://pypi.org/simple 2026-02-10T06:42:49,840 Fetched page https://pypi.org/simple/pystack3d/ as application/vnd.pypi.simple.v1+json 2026-02-10T06:42:49,843 Skipping link: No binaries permitted for pystack3d: https://files.pythonhosted.org/packages/27/7b/8105fa7b97a69cf82e7edd4f017040ab8c42c1503989cc6a5a8b222860fd/pystack3d-2024.1-py3-none-any.whl (from https://pypi.org/simple/pystack3d/) (requires-python:>=3.10) 2026-02-10T06:42:49,844 Found link https://files.pythonhosted.org/packages/0b/1a/924b00fcb539dc2440cfd24558392f2b6752a112bf911cdde9c5e99fb333/pystack3d-2024.1.tar.gz (from https://pypi.org/simple/pystack3d/) (requires-python:>=3.10), version: 2024.1 2026-02-10T06:42:49,845 Skipping link: No binaries permitted for pystack3d: https://files.pythonhosted.org/packages/05/b9/80be3ab696ccff2533913ff68951d68d7590800e7ea57b1b6bfb175500a7/pystack3d-2024.2-py3-none-any.whl (from https://pypi.org/simple/pystack3d/) (requires-python:<3.12,>=3.8) 2026-02-10T06:42:49,846 Found link https://files.pythonhosted.org/packages/0e/e7/5129cee9828426a2032c8382261ca3be34af7b753142865a9fc4d4a27ac1/pystack3d-2024.2.tar.gz (from https://pypi.org/simple/pystack3d/) (requires-python:<3.12,>=3.8), version: 2024.2 2026-02-10T06:42:49,847 Skipping link: No binaries permitted for pystack3d: https://files.pythonhosted.org/packages/c1/b2/7fad01565c47dc2602523b9d7809701d8246bb6aa462be7a6d27485530e1/pystack3d-2025.1-py3-none-any.whl (from https://pypi.org/simple/pystack3d/) (requires-python:<3.12,>=3.8) 2026-02-10T06:42:49,848 Found link https://files.pythonhosted.org/packages/bf/d1/2fadf1b3ce4240fa8666de967d06a938575c82cdde5dedb435855ea50ae6/pystack3d-2025.1.tar.gz (from https://pypi.org/simple/pystack3d/) (requires-python:<3.12,>=3.8), version: 2025.1 2026-02-10T06:42:49,849 Skipping link: No binaries permitted for pystack3d: https://files.pythonhosted.org/packages/01/4b/86263628fc48ad633d9be9e0c6edf35c81141c1fc6e274566ec83d6fa6cd/pystack3d-2025.2-py3-none-any.whl (from https://pypi.org/simple/pystack3d/) (requires-python:>=3.8) 2026-02-10T06:42:49,850 Found link https://files.pythonhosted.org/packages/91/55/f5d64b185a2275973e4facfb421881081d78a9d62cdb3c1299b45b0b3aa2/pystack3d-2025.2.tar.gz (from https://pypi.org/simple/pystack3d/) (requires-python:>=3.8), version: 2025.2 2026-02-10T06:42:49,851 Skipping link: No binaries permitted for pystack3d: https://files.pythonhosted.org/packages/b5/c9/dd3774d86b62904ada460e7bc7502a7937a8c717ed8478fb80b1153bdafe/pystack3d-2025.3-py3-none-any.whl (from https://pypi.org/simple/pystack3d/) (requires-python:>=3.8) 2026-02-10T06:42:49,852 Found link https://files.pythonhosted.org/packages/c2/0d/5947356ef03e384c91f8d92ffa17a8d9ebe28a184b3cb65a3ce09006aebc/pystack3d-2025.3.tar.gz (from https://pypi.org/simple/pystack3d/) (requires-python:>=3.8), version: 2025.3 2026-02-10T06:42:49,853 Skipping link: No binaries permitted for pystack3d: https://files.pythonhosted.org/packages/6a/42/776e41015a623843a59971d39109c7d07822ff38c344137f7b305437eb38/pystack3d-2026.1-py3-none-any.whl (from https://pypi.org/simple/pystack3d/) (requires-python:>=3.8) 2026-02-10T06:42:49,853 Found link https://files.pythonhosted.org/packages/5b/e8/aa65f080931b7c38f63429a2761c7fc429372e81892496170694111056c4/pystack3d-2026.1.tar.gz (from https://pypi.org/simple/pystack3d/) (requires-python:>=3.8), version: 2026.1 2026-02-10T06:42:49,854 Fetching project page and analyzing links: https://www.piwheels.org/simple/pystack3d/ 2026-02-10T06:42:49,855 Getting page https://www.piwheels.org/simple/pystack3d/ 2026-02-10T06:42:49,856 Found index url https://www.piwheels.org/simple 2026-02-10T06:42:50,015 Fetched page https://www.piwheels.org/simple/pystack3d/ as text/html 2026-02-10T06:42:50,018 Skipping link: No binaries permitted for pystack3d: https://archive1.piwheels.org/simple/pystack3d/pystack3d-2025.3-py3-none-any.whl#sha256=b2ad70b98fbfaecdebf6696a8e36497430a49083c5d4435c9592aef0dd353abb (from https://www.piwheels.org/simple/pystack3d/) (requires-python:>=3.8) 2026-02-10T06:42:50,018 Skipping link: No binaries permitted for pystack3d: https://archive1.piwheels.org/simple/pystack3d/pystack3d-2025.2-py3-none-any.whl#sha256=3094858591d09bfc4f5657f7b22597539bddc1935455433e697736f83b805405 (from https://www.piwheels.org/simple/pystack3d/) (requires-python:>=3.8) 2026-02-10T06:42:50,019 Skipping link: No binaries permitted for pystack3d: https://archive1.piwheels.org/simple/pystack3d/pystack3d-2025.1-py3-none-any.whl#sha256=5e7572f006a779870fb191ff5f3fa1d72d2e37bd1851ed38b2b52809b7f22333 (from https://www.piwheels.org/simple/pystack3d/) (requires-python:<3.12,>=3.8) 2026-02-10T06:42:50,019 Skipping link: No binaries permitted for pystack3d: https://archive1.piwheels.org/simple/pystack3d/pystack3d-2024.2-py3-none-any.whl#sha256=d2a7a626ae682c5786f1cb18cca7c14358353a95ebc10fae59952b8d27c697a5 (from https://www.piwheels.org/simple/pystack3d/) (requires-python:<3.12,>=3.8) 2026-02-10T06:42:50,020 Skipping link: No binaries permitted for pystack3d: https://archive1.piwheels.org/simple/pystack3d/pystack3d-2024.1-py3-none-any.whl#sha256=a9749bf7287d387173f74a5e4ecd5b7344412d9a06eabedd1ef263b36bda2c47 (from https://www.piwheels.org/simple/pystack3d/) (requires-python:>=3.10) 2026-02-10T06:42:50,021 Skipping link: not a file: https://www.piwheels.org/simple/pystack3d/ 2026-02-10T06:42:50,021 Skipping link: not a file: https://pypi.org/simple/pystack3d/ 2026-02-10T06:42:50,041 Given no hashes to check 1 links for project 'pystack3d': discarding no candidates 2026-02-10T06:42:50,059 Collecting pystack3d==2026.1 2026-02-10T06:42:50,061 Created temporary directory: /tmp/pip-unpack-j985kit2 2026-02-10T06:42:50,273 Downloading pystack3d-2026.1.tar.gz (47 kB) 2026-02-10T06:42:50,376 Added pystack3d==2026.1 from https://files.pythonhosted.org/packages/5b/e8/aa65f080931b7c38f63429a2761c7fc429372e81892496170694111056c4/pystack3d-2026.1.tar.gz to build tracker '/tmp/pip-build-tracker-hwkxpux4' 2026-02-10T06:42:50,381 Created temporary directory: /tmp/pip-build-env-8auyymea 2026-02-10T06:42:50,385 Installing build dependencies: started 2026-02-10T06:42:50,386 Running command pip subprocess to install build dependencies 2026-02-10T06:42:51,501 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-02-10T06:42:52,103 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-02-10T06:42:52,125 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-02-10T06:42:53,908 Collecting setuptools>=42 2026-02-10T06:42:53,928 Using cached setuptools-82.0.0-py3-none-any.whl (1.0 MB) 2026-02-10T06:42:57,129 Installing collected packages: setuptools 2026-02-10T06:43:00,119 Successfully installed setuptools-82.0.0 2026-02-10T06:43:00,384 Installing build dependencies: finished with status 'done' 2026-02-10T06:43:00,390 Getting requirements to build wheel: started 2026-02-10T06:43:00,391 Running command Getting requirements to build wheel 2026-02-10T06:43:00,982 /tmp/pip-build-env-8auyymea/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-02-10T06:43:00,982 !! 2026-02-10T06:43:00,983 ******************************************************************************** 2026-02-10T06:43:00,983 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-02-10T06:43:00,984 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-02-10T06:43:00,985 or your builds will no longer be supported. 2026-02-10T06:43:00,986 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-02-10T06:43:00,986 ******************************************************************************** 2026-02-10T06:43:00,987 !! 2026-02-10T06:43:00,988 corresp(dist, value, root_dir) 2026-02-10T06:43:01,059 /tmp/pip-build-env-8auyymea/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-02-10T06:43:01,059 !! 2026-02-10T06:43:01,060 ******************************************************************************** 2026-02-10T06:43:01,061 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-02-10T06:43:01,062 License :: OSI Approved :: GNU General Public License v3 (GPLv3) 2026-02-10T06:43:01,064 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-02-10T06:43:01,064 ******************************************************************************** 2026-02-10T06:43:01,066 !! 2026-02-10T06:43:01,066 dist._finalize_license_expression() 2026-02-10T06:43:01,067 /tmp/pip-build-env-8auyymea/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-02-10T06:43:01,067 !! 2026-02-10T06:43:01,069 ******************************************************************************** 2026-02-10T06:43:01,069 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-02-10T06:43:01,070 License :: OSI Approved :: GNU General Public License v3 (GPLv3) 2026-02-10T06:43:01,071 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-02-10T06:43:01,072 ******************************************************************************** 2026-02-10T06:43:01,073 !! 2026-02-10T06:43:01,074 self._finalize_license_expression() 2026-02-10T06:43:01,074 running egg_info 2026-02-10T06:43:01,075 writing pystack3d.egg-info/PKG-INFO 2026-02-10T06:43:01,079 writing dependency_links to pystack3d.egg-info/dependency_links.txt 2026-02-10T06:43:01,082 writing requirements to pystack3d.egg-info/requires.txt 2026-02-10T06:43:01,083 writing top-level names to pystack3d.egg-info/top_level.txt 2026-02-10T06:43:01,103 reading manifest file 'pystack3d.egg-info/SOURCES.txt' 2026-02-10T06:43:01,106 adding license file 'LICENSE' 2026-02-10T06:43:01,109 writing manifest file 'pystack3d.egg-info/SOURCES.txt' 2026-02-10T06:43:01,206 Getting requirements to build wheel: finished with status 'done' 2026-02-10T06:43:01,209 Created temporary directory: /tmp/pip-modern-metadata-pgj2ndei 2026-02-10T06:43:01,211 Preparing metadata (pyproject.toml): started 2026-02-10T06:43:01,212 Running command Preparing metadata (pyproject.toml) 2026-02-10T06:43:01,771 /tmp/pip-build-env-8auyymea/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-02-10T06:43:01,771 !! 2026-02-10T06:43:01,772 ******************************************************************************** 2026-02-10T06:43:01,773 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-02-10T06:43:01,773 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-02-10T06:43:01,774 or your builds will no longer be supported. 2026-02-10T06:43:01,775 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-02-10T06:43:01,775 ******************************************************************************** 2026-02-10T06:43:01,776 !! 2026-02-10T06:43:01,777 corresp(dist, value, root_dir) 2026-02-10T06:43:01,846 /tmp/pip-build-env-8auyymea/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-02-10T06:43:01,846 !! 2026-02-10T06:43:01,847 ******************************************************************************** 2026-02-10T06:43:01,848 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-02-10T06:43:01,849 License :: OSI Approved :: GNU General Public License v3 (GPLv3) 2026-02-10T06:43:01,850 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-02-10T06:43:01,851 ******************************************************************************** 2026-02-10T06:43:01,852 !! 2026-02-10T06:43:01,852 dist._finalize_license_expression() 2026-02-10T06:43:01,853 /tmp/pip-build-env-8auyymea/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-02-10T06:43:01,853 !! 2026-02-10T06:43:01,855 ******************************************************************************** 2026-02-10T06:43:01,855 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-02-10T06:43:01,856 License :: OSI Approved :: GNU General Public License v3 (GPLv3) 2026-02-10T06:43:01,857 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-02-10T06:43:01,858 ******************************************************************************** 2026-02-10T06:43:01,859 !! 2026-02-10T06:43:01,860 self._finalize_license_expression() 2026-02-10T06:43:01,860 running dist_info 2026-02-10T06:43:01,868 creating /tmp/pip-modern-metadata-pgj2ndei/pystack3d.egg-info 2026-02-10T06:43:01,869 writing /tmp/pip-modern-metadata-pgj2ndei/pystack3d.egg-info/PKG-INFO 2026-02-10T06:43:01,873 writing dependency_links to /tmp/pip-modern-metadata-pgj2ndei/pystack3d.egg-info/dependency_links.txt 2026-02-10T06:43:01,875 writing requirements to /tmp/pip-modern-metadata-pgj2ndei/pystack3d.egg-info/requires.txt 2026-02-10T06:43:01,877 writing top-level names to /tmp/pip-modern-metadata-pgj2ndei/pystack3d.egg-info/top_level.txt 2026-02-10T06:43:01,878 writing manifest file '/tmp/pip-modern-metadata-pgj2ndei/pystack3d.egg-info/SOURCES.txt' 2026-02-10T06:43:01,896 reading manifest file '/tmp/pip-modern-metadata-pgj2ndei/pystack3d.egg-info/SOURCES.txt' 2026-02-10T06:43:01,898 adding license file 'LICENSE' 2026-02-10T06:43:01,901 writing manifest file '/tmp/pip-modern-metadata-pgj2ndei/pystack3d.egg-info/SOURCES.txt' 2026-02-10T06:43:01,902 creating '/tmp/pip-modern-metadata-pgj2ndei/pystack3d-2026.1.dist-info' 2026-02-10T06:43:02,022 Preparing metadata (pyproject.toml): finished with status 'done' 2026-02-10T06:43:02,027 Source in /tmp/pip-wheel-sy_brx00/pystack3d_ca1750fc41724f0da6e1732dca00f9e6 has version 2026.1, which satisfies requirement pystack3d==2026.1 from https://files.pythonhosted.org/packages/5b/e8/aa65f080931b7c38f63429a2761c7fc429372e81892496170694111056c4/pystack3d-2026.1.tar.gz 2026-02-10T06:43:02,028 Removed pystack3d==2026.1 from https://files.pythonhosted.org/packages/5b/e8/aa65f080931b7c38f63429a2761c7fc429372e81892496170694111056c4/pystack3d-2026.1.tar.gz from build tracker '/tmp/pip-build-tracker-hwkxpux4' 2026-02-10T06:43:02,034 Created temporary directory: /tmp/pip-unpack-40czbolt 2026-02-10T06:43:02,034 Building wheels for collected packages: pystack3d 2026-02-10T06:43:02,038 Created temporary directory: /tmp/pip-wheel-m2lxbkpt 2026-02-10T06:43:02,039 Destination directory: /tmp/pip-wheel-m2lxbkpt 2026-02-10T06:43:02,041 Building wheel for pystack3d (pyproject.toml): started 2026-02-10T06:43:02,042 Running command Building wheel for pystack3d (pyproject.toml) 2026-02-10T06:43:02,589 /tmp/pip-build-env-8auyymea/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-02-10T06:43:02,589 !! 2026-02-10T06:43:02,590 ******************************************************************************** 2026-02-10T06:43:02,591 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-02-10T06:43:02,592 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-02-10T06:43:02,592 or your builds will no longer be supported. 2026-02-10T06:43:02,593 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-02-10T06:43:02,594 ******************************************************************************** 2026-02-10T06:43:02,595 !! 2026-02-10T06:43:02,596 corresp(dist, value, root_dir) 2026-02-10T06:43:02,656 /tmp/pip-build-env-8auyymea/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-02-10T06:43:02,657 !! 2026-02-10T06:43:02,658 ******************************************************************************** 2026-02-10T06:43:02,659 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-02-10T06:43:02,660 License :: OSI Approved :: GNU General Public License v3 (GPLv3) 2026-02-10T06:43:02,661 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-02-10T06:43:02,661 ******************************************************************************** 2026-02-10T06:43:02,662 !! 2026-02-10T06:43:02,663 dist._finalize_license_expression() 2026-02-10T06:43:02,664 /tmp/pip-build-env-8auyymea/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-02-10T06:43:02,664 !! 2026-02-10T06:43:02,665 ******************************************************************************** 2026-02-10T06:43:02,666 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-02-10T06:43:02,667 License :: OSI Approved :: GNU General Public License v3 (GPLv3) 2026-02-10T06:43:02,668 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-02-10T06:43:02,669 ******************************************************************************** 2026-02-10T06:43:02,670 !! 2026-02-10T06:43:02,671 self._finalize_license_expression() 2026-02-10T06:43:02,671 running bdist_wheel 2026-02-10T06:43:02,681 running build 2026-02-10T06:43:02,682 running build_py 2026-02-10T06:43:02,688 creating build/lib/pystack3d 2026-02-10T06:43:02,690 copying pystack3d/resampling.py -> build/lib/pystack3d 2026-02-10T06:43:02,692 copying pystack3d/intensity_rescaling.py -> build/lib/pystack3d 2026-02-10T06:43:02,694 copying pystack3d/destriping.py -> build/lib/pystack3d 2026-02-10T06:43:02,696 copying pystack3d/bkg_removal.py -> build/lib/pystack3d 2026-02-10T06:43:02,699 copying pystack3d/stack3d.py -> build/lib/pystack3d 2026-02-10T06:43:02,702 copying pystack3d/registration_transformation.py -> build/lib/pystack3d 2026-02-10T06:43:02,704 copying pystack3d/utils.py -> build/lib/pystack3d 2026-02-10T06:43:02,707 copying pystack3d/__init__.py -> build/lib/pystack3d 2026-02-10T06:43:02,708 copying pystack3d/intensity_rescaling_area.py -> build/lib/pystack3d 2026-02-10T06:43:02,710 copying pystack3d/cropping.py -> build/lib/pystack3d 2026-02-10T06:43:02,712 copying pystack3d/utils_multiprocessing.py -> build/lib/pystack3d 2026-02-10T06:43:02,714 copying pystack3d/utils_metadata_fibics.py -> build/lib/pystack3d 2026-02-10T06:43:02,716 copying pystack3d/registration_calculation.py -> build/lib/pystack3d 2026-02-10T06:43:02,718 running egg_info 2026-02-10T06:43:02,728 writing pystack3d.egg-info/PKG-INFO 2026-02-10T06:43:02,731 writing dependency_links to pystack3d.egg-info/dependency_links.txt 2026-02-10T06:43:02,733 writing requirements to pystack3d.egg-info/requires.txt 2026-02-10T06:43:02,734 writing top-level names to pystack3d.egg-info/top_level.txt 2026-02-10T06:43:02,743 reading manifest file 'pystack3d.egg-info/SOURCES.txt' 2026-02-10T06:43:02,746 adding license file 'LICENSE' 2026-02-10T06:43:02,749 writing manifest file 'pystack3d.egg-info/SOURCES.txt' 2026-02-10T06:43:02,751 /tmp/pip-build-env-8auyymea/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'pystack3d.assets' is absent from the `packages` configuration. 2026-02-10T06:43:02,752 !! 2026-02-10T06:43:02,753 ******************************************************************************** 2026-02-10T06:43:02,753 ############################ 2026-02-10T06:43:02,754 # Package would be ignored # 2026-02-10T06:43:02,754 ############################ 2026-02-10T06:43:02,755 Python recognizes 'pystack3d.assets' as an importable package[^1], 2026-02-10T06:43:02,755 but it is absent from setuptools' `packages` configuration. 2026-02-10T06:43:02,756 This leads to an ambiguous overall configuration. If you want to distribute this 2026-02-10T06:43:02,757 package, please make sure that 'pystack3d.assets' is explicitly added 2026-02-10T06:43:02,757 to the `packages` configuration field. 2026-02-10T06:43:02,758 Alternatively, you can also rely on setuptools' discovery methods 2026-02-10T06:43:02,759 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-02-10T06:43:02,759 instead of `find_packages(...)`/`find:`). 2026-02-10T06:43:02,760 You can read more about "package discovery" on setuptools documentation page: 2026-02-10T06:43:02,762 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-02-10T06:43:02,763 If you don't want 'pystack3d.assets' to be distributed and are 2026-02-10T06:43:02,763 already explicitly excluding 'pystack3d.assets' via 2026-02-10T06:43:02,764 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-02-10T06:43:02,764 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-02-10T06:43:02,765 combination with a more fine grained `package-data` configuration. 2026-02-10T06:43:02,766 You can read more about "package data files" on setuptools documentation page: 2026-02-10T06:43:02,767 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-02-10T06:43:02,768 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-02-10T06:43:02,769 even if it does not contain any `.py` files. 2026-02-10T06:43:02,769 On the other hand, currently there is no concept of package data 2026-02-10T06:43:02,770 directory, all directories are treated like packages. 2026-02-10T06:43:02,770 ******************************************************************************** 2026-02-10T06:43:02,771 !! 2026-02-10T06:43:02,771 check.warn(importable) 2026-02-10T06:43:02,772 creating build/lib/pystack3d/assets 2026-02-10T06:43:02,772 copying pystack3d/assets/params.toml -> build/lib/pystack3d/assets 2026-02-10T06:43:02,773 installing to build/bdist.linux-armv7l/wheel 2026-02-10T06:43:02,773 running install 2026-02-10T06:43:02,791 running install_lib 2026-02-10T06:43:02,797 creating build/bdist.linux-armv7l/wheel 2026-02-10T06:43:02,799 creating build/bdist.linux-armv7l/wheel/pystack3d 2026-02-10T06:43:02,800 copying build/lib/pystack3d/resampling.py -> build/bdist.linux-armv7l/wheel/./pystack3d 2026-02-10T06:43:02,802 copying build/lib/pystack3d/intensity_rescaling.py -> build/bdist.linux-armv7l/wheel/./pystack3d 2026-02-10T06:43:02,804 copying build/lib/pystack3d/destriping.py -> build/bdist.linux-armv7l/wheel/./pystack3d 2026-02-10T06:43:02,806 copying build/lib/pystack3d/bkg_removal.py -> build/bdist.linux-armv7l/wheel/./pystack3d 2026-02-10T06:43:02,809 copying build/lib/pystack3d/stack3d.py -> build/bdist.linux-armv7l/wheel/./pystack3d 2026-02-10T06:43:02,811 copying build/lib/pystack3d/registration_transformation.py -> build/bdist.linux-armv7l/wheel/./pystack3d 2026-02-10T06:43:02,813 copying build/lib/pystack3d/utils.py -> build/bdist.linux-armv7l/wheel/./pystack3d 2026-02-10T06:43:02,815 copying build/lib/pystack3d/__init__.py -> build/bdist.linux-armv7l/wheel/./pystack3d 2026-02-10T06:43:02,817 copying build/lib/pystack3d/intensity_rescaling_area.py -> build/bdist.linux-armv7l/wheel/./pystack3d 2026-02-10T06:43:02,819 copying build/lib/pystack3d/cropping.py -> build/bdist.linux-armv7l/wheel/./pystack3d 2026-02-10T06:43:02,821 copying build/lib/pystack3d/utils_multiprocessing.py -> build/bdist.linux-armv7l/wheel/./pystack3d 2026-02-10T06:43:02,823 copying build/lib/pystack3d/utils_metadata_fibics.py -> build/bdist.linux-armv7l/wheel/./pystack3d 2026-02-10T06:43:02,826 copying build/lib/pystack3d/registration_calculation.py -> build/bdist.linux-armv7l/wheel/./pystack3d 2026-02-10T06:43:02,828 creating build/bdist.linux-armv7l/wheel/pystack3d/assets 2026-02-10T06:43:02,829 copying build/lib/pystack3d/assets/params.toml -> build/bdist.linux-armv7l/wheel/./pystack3d/assets 2026-02-10T06:43:02,831 running install_egg_info 2026-02-10T06:43:02,835 Copying pystack3d.egg-info to build/bdist.linux-armv7l/wheel/./pystack3d-2026.1-py3.11.egg-info 2026-02-10T06:43:02,845 running install_scripts 2026-02-10T06:43:02,855 creating build/bdist.linux-armv7l/wheel/pystack3d-2026.1.dist-info/WHEEL 2026-02-10T06:43:02,858 creating '/tmp/pip-wheel-m2lxbkpt/.tmp-977f8p95/pystack3d-2026.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-02-10T06:43:02,860 adding 'pystack3d/__init__.py' 2026-02-10T06:43:02,863 adding 'pystack3d/bkg_removal.py' 2026-02-10T06:43:02,865 adding 'pystack3d/cropping.py' 2026-02-10T06:43:02,867 adding 'pystack3d/destriping.py' 2026-02-10T06:43:02,869 adding 'pystack3d/intensity_rescaling.py' 2026-02-10T06:43:02,871 adding 'pystack3d/intensity_rescaling_area.py' 2026-02-10T06:43:02,873 adding 'pystack3d/registration_calculation.py' 2026-02-10T06:43:02,875 adding 'pystack3d/registration_transformation.py' 2026-02-10T06:43:02,877 adding 'pystack3d/resampling.py' 2026-02-10T06:43:02,880 adding 'pystack3d/stack3d.py' 2026-02-10T06:43:02,882 adding 'pystack3d/utils.py' 2026-02-10T06:43:02,883 adding 'pystack3d/utils_metadata_fibics.py' 2026-02-10T06:43:02,885 adding 'pystack3d/utils_multiprocessing.py' 2026-02-10T06:43:02,887 adding 'pystack3d/assets/params.toml' 2026-02-10T06:43:02,894 adding 'pystack3d-2026.1.dist-info/licenses/LICENSE' 2026-02-10T06:43:02,895 adding 'pystack3d-2026.1.dist-info/METADATA' 2026-02-10T06:43:02,896 adding 'pystack3d-2026.1.dist-info/WHEEL' 2026-02-10T06:43:02,897 adding 'pystack3d-2026.1.dist-info/top_level.txt' 2026-02-10T06:43:02,898 adding 'pystack3d-2026.1.dist-info/RECORD' 2026-02-10T06:43:02,900 removing build/bdist.linux-armv7l/wheel 2026-02-10T06:43:03,004 Building wheel for pystack3d (pyproject.toml): finished with status 'done' 2026-02-10T06:43:03,009 Created wheel for pystack3d: filename=pystack3d-2026.1-py3-none-any.whl size=53727 sha256=960df4538cfa5128340de73ad614b2a9bd33b516dafa322ff5715159c81fea0f 2026-02-10T06:43:03,010 Stored in directory: /tmp/pip-ephem-wheel-cache-8h66xuiy/wheels/ca/de/df/7ce9f67b553c6ca4158174631eefee38587131e5aa0f888ec6 2026-02-10T06:43:03,022 Successfully built pystack3d 2026-02-10T06:43:03,026 Removed build tracker: '/tmp/pip-build-tracker-hwkxpux4'