2026-02-10T22:08:52,432 Created temporary directory: /tmp/pip-ephem-wheel-cache-q8grrvh5 2026-02-10T22:08:52,435 Created temporary directory: /tmp/pip-build-tracker-hmxw28wb 2026-02-10T22:08:52,436 Initialized build tracking at /tmp/pip-build-tracker-hmxw28wb 2026-02-10T22:08:52,437 Created build tracker: /tmp/pip-build-tracker-hmxw28wb 2026-02-10T22:08:52,437 Entered build tracker: /tmp/pip-build-tracker-hmxw28wb 2026-02-10T22:08:52,439 Created temporary directory: /tmp/pip-wheel-1sueagoh 2026-02-10T22:08:52,441 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-02-10T22:08:52,444 Created temporary directory: /tmp/pip-ephem-wheel-cache-o1_riwc2 2026-02-10T22:08:52,467 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-02-10T22:08:52,470 2 location(s) to search for versions of pyxmipp3: 2026-02-10T22:08:52,470 * https://pypi.org/simple/pyxmipp3/ 2026-02-10T22:08:52,470 * https://www.piwheels.org/simple/pyxmipp3/ 2026-02-10T22:08:52,471 Fetching project page and analyzing links: https://pypi.org/simple/pyxmipp3/ 2026-02-10T22:08:52,472 Getting page https://pypi.org/simple/pyxmipp3/ 2026-02-10T22:08:52,473 Found index url https://pypi.org/simple 2026-02-10T22:08:52,775 Fetched page https://pypi.org/simple/pyxmipp3/ as application/vnd.pypi.simple.v1+json 2026-02-10T22:08:52,782 Skipping link: No binaries permitted for pyxmipp3: https://files.pythonhosted.org/packages/e4/22/c0ebd69a72039b4aa92400f7ba58ce93e92efee91bf70757f946184837ac/pyxmipp3-0.1.0-cp310-cp310-manylinux_2_28_aarch64.whl (from https://pypi.org/simple/pyxmipp3/) (requires-python:>=3.7) 2026-02-10T22:08:52,783 Skipping link: No binaries permitted for pyxmipp3: https://files.pythonhosted.org/packages/ea/17/ffa8ff895af6a07db20595dd7308f2d10083e714f304c076a47dcc9e65bf/pyxmipp3-0.1.0-cp310-cp310-manylinux_2_28_x86_64.whl (from https://pypi.org/simple/pyxmipp3/) (requires-python:>=3.7) 2026-02-10T22:08:52,783 Skipping link: No binaries permitted for pyxmipp3: https://files.pythonhosted.org/packages/33/b4/40509b80c37200fd7e689c9784b0dacbdc9372af31d7ff9894a598f26de8/pyxmipp3-0.1.0-cp311-cp311-manylinux_2_28_aarch64.whl (from https://pypi.org/simple/pyxmipp3/) (requires-python:>=3.7) 2026-02-10T22:08:52,784 Skipping link: No binaries permitted for pyxmipp3: 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https://files.pythonhosted.org/packages/8b/a8/0d2d5a55e5fb07e5e62e940f10c8c07dc22d4726268d9edc488a02a66d44/pyxmipp3-0.1.0-cp39-cp39-manylinux_2_28_aarch64.whl (from https://pypi.org/simple/pyxmipp3/) (requires-python:>=3.7) 2026-02-10T22:08:52,789 Skipping link: No binaries permitted for pyxmipp3: https://files.pythonhosted.org/packages/54/1a/6eed46233fd1fa8d72edfd465fd1bfb3a3cf24de34df04aa5132ae871921/pyxmipp3-0.1.0-cp39-cp39-manylinux_2_28_x86_64.whl (from https://pypi.org/simple/pyxmipp3/) (requires-python:>=3.7) 2026-02-10T22:08:52,790 Found link https://files.pythonhosted.org/packages/58/ed/ec787a7121ed8e4d6be0a5abda6a0f54866ad25589b73c1e8380d77023c0/pyxmipp3-0.1.0.tar.gz (from https://pypi.org/simple/pyxmipp3/) (requires-python:>=3.7), version: 0.1.0 2026-02-10T22:08:52,791 Skipping link: No binaries permitted for pyxmipp3: https://files.pythonhosted.org/packages/7e/54/dd334439310a01b9efa64d08e7a4f2c2c423960a600b603dbd63b0c7ff83/pyxmipp3-0.1.1-cp310-cp310-manylinux_2_28_aarch64.whl (from https://pypi.org/simple/pyxmipp3/) (requires-python:>=3.7) 2026-02-10T22:08:52,791 Skipping link: No binaries permitted for pyxmipp3: https://files.pythonhosted.org/packages/59/47/5d698de8367b3692fb68be1859b678ea38a49ce737d64694e9a8f343883e/pyxmipp3-0.1.1-cp310-cp310-manylinux_2_28_x86_64.whl (from https://pypi.org/simple/pyxmipp3/) (requires-python:>=3.7) 2026-02-10T22:08:52,792 Skipping link: No binaries permitted for pyxmipp3: https://files.pythonhosted.org/packages/4a/b8/a81b1286e0bddb43a3a071582e7585595a82f3c84621523257f3344b532d/pyxmipp3-0.1.1-cp311-cp311-manylinux_2_28_aarch64.whl (from https://pypi.org/simple/pyxmipp3/) (requires-python:>=3.7) 2026-02-10T22:08:52,792 Skipping link: No binaries permitted for pyxmipp3: 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https://files.pythonhosted.org/packages/08/6f/d0e0c9e65b85a7e0664f6690db06aea1301dd300804d047d6e5f882ce0cf/pyxmipp3-0.1.1-cp314-cp314-manylinux_2_28_x86_64.whl (from https://pypi.org/simple/pyxmipp3/) (requires-python:>=3.7) 2026-02-10T22:08:52,797 Skipping link: No binaries permitted for pyxmipp3: https://files.pythonhosted.org/packages/ef/14/59ac2820a02d20701814d1427ba54387d87214af04634f06c8a617561d96/pyxmipp3-0.1.1-cp38-cp38-manylinux_2_28_aarch64.whl (from https://pypi.org/simple/pyxmipp3/) (requires-python:>=3.7) 2026-02-10T22:08:52,797 Skipping link: No binaries permitted for pyxmipp3: https://files.pythonhosted.org/packages/96/09/2c532df1f3928f353c652d8c31ed66080e14a869d78cfaffbb496bfb7fb5/pyxmipp3-0.1.1-cp38-cp38-manylinux_2_28_x86_64.whl (from https://pypi.org/simple/pyxmipp3/) (requires-python:>=3.7) 2026-02-10T22:08:52,798 Skipping link: No binaries permitted for pyxmipp3: https://files.pythonhosted.org/packages/df/c4/66ca8a5a197fca4b55e7377290e76166f8b0a624f8808c613c3e24ab48a9/pyxmipp3-0.1.1-cp39-cp39-manylinux_2_28_aarch64.whl (from https://pypi.org/simple/pyxmipp3/) (requires-python:>=3.7) 2026-02-10T22:08:52,798 Skipping link: No binaries permitted for pyxmipp3: https://files.pythonhosted.org/packages/eb/a3/1aa2be1dd5b3900fc15f736f8449895ea9bd01edad21d2779c26f556ae17/pyxmipp3-0.1.1-cp39-cp39-manylinux_2_28_x86_64.whl (from https://pypi.org/simple/pyxmipp3/) (requires-python:>=3.7) 2026-02-10T22:08:52,799 Found link https://files.pythonhosted.org/packages/b7/ea/ad6c54170be27a8af09e89484b307c79c4b6102503ca7998ed07ca4d8cc0/pyxmipp3-0.1.1.tar.gz (from https://pypi.org/simple/pyxmipp3/) (requires-python:>=3.7), version: 0.1.1 2026-02-10T22:08:52,800 Fetching project page and analyzing links: https://www.piwheels.org/simple/pyxmipp3/ 2026-02-10T22:08:52,801 Getting page https://www.piwheels.org/simple/pyxmipp3/ 2026-02-10T22:08:52,802 Found index url https://www.piwheels.org/simple 2026-02-10T22:08:52,953 Fetched page https://www.piwheels.org/simple/pyxmipp3/ as text/html 2026-02-10T22:08:52,954 Skipping link: not a file: https://www.piwheels.org/simple/pyxmipp3/ 2026-02-10T22:08:52,955 Skipping link: not a file: https://pypi.org/simple/pyxmipp3/ 2026-02-10T22:08:52,973 Given no hashes to check 1 links for project 'pyxmipp3': discarding no candidates 2026-02-10T22:08:52,992 Collecting pyxmipp3==0.1.0 2026-02-10T22:08:52,994 Created temporary directory: /tmp/pip-unpack-hcneuvgw 2026-02-10T22:08:53,211 Downloading pyxmipp3-0.1.0.tar.gz (2.1 MB) 2026-02-10T22:08:54,528 Added pyxmipp3==0.1.0 from https://files.pythonhosted.org/packages/58/ed/ec787a7121ed8e4d6be0a5abda6a0f54866ad25589b73c1e8380d77023c0/pyxmipp3-0.1.0.tar.gz to build tracker '/tmp/pip-build-tracker-hmxw28wb' 2026-02-10T22:08:54,533 Created temporary directory: /tmp/pip-build-env-sr7blpuh 2026-02-10T22:08:54,538 Installing build dependencies: started 2026-02-10T22:08:54,539 Running command pip subprocess to install build dependencies 2026-02-10T22:08:55,668 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-02-10T22:08:56,497 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-02-10T22:08:56,734 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-02-10T22:08:57,275 Collecting scikit-build-core==0.11.* 2026-02-10T22:08:57,302 Using cached https://www.piwheels.org/simple/scikit-build-core/scikit_build_core-0.11.6-py3-none-any.whl (185 kB) 2026-02-10T22:08:58,311 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/3a/be/650f9c091ef71cb01d735775d554e068752d3ff63d7943b26316dc401749/numpy-1.21.2.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2026-02-10T22:08:58,319 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/5f/d6/ad58ded26556eaeaa8c971e08b6466f17c4ac4d786cd3d800e26ce59cc01/numpy-1.21.3.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2026-02-10T22:08:58,326 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/fb/48/b0708ebd7718a8933f0d3937513ef8ef2f4f04529f1f66ca86d873043921/numpy-1.21.4.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2026-02-10T22:08:58,334 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/c2/a8/a924a09492bdfee8c2ec3094d0a13f2799800b4fdc9c890738aeeb12c72e/numpy-1.21.5.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2026-02-10T22:08:58,341 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/45/b7/de7b8e67f2232c26af57c205aaad29fe17754f793404f59c8a730c7a191a/numpy-1.21.6.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2026-02-10T22:08:59,037 Collecting numpy==1.* 2026-02-10T22:08:59,456 Using cached https://www.piwheels.org/simple/numpy/numpy-1.26.4-cp311-cp311-linux_armv7l.whl (5.6 MB) 2026-02-10T22:08:59,968 Collecting packaging>=23.2 2026-02-10T22:08:59,985 Using cached https://www.piwheels.org/simple/packaging/packaging-26.0-py3-none-any.whl (74 kB) 2026-02-10T22:09:00,103 Collecting pathspec>=0.10.1 2026-02-10T22:09:00,120 Using cached https://www.piwheels.org/simple/pathspec/pathspec-1.0.4-py3-none-any.whl (55 kB) 2026-02-10T22:09:03,013 Installing collected packages: pathspec, packaging, numpy, scikit-build-core 2026-02-10T22:09:12,512 Creating /tmp/pip-build-env-sr7blpuh/overlay/local/bin 2026-02-10T22:09:12,514 changing mode of /tmp/pip-build-env-sr7blpuh/overlay/local/bin/f2py to 755 2026-02-10T22:09:13,153 Successfully installed numpy-1.26.4 packaging-26.0 pathspec-1.0.4 scikit-build-core-0.11.6 2026-02-10T22:09:13,472 Installing build dependencies: finished with status 'done' 2026-02-10T22:09:13,478 Getting requirements to build wheel: started 2026-02-10T22:09:13,480 Running command Getting requirements to build wheel 2026-02-10T22:09:13,978 WARNING: Use build.verbose instead of cmake.verbose for scikit-build-core >= 0.10 2026-02-10T22:09:14,080 Getting requirements to build wheel: finished with status 'done' 2026-02-10T22:09:14,084 Created temporary directory: /tmp/pip-modern-metadata-zfvbrsr1 2026-02-10T22:09:14,086 Preparing metadata (pyproject.toml): started 2026-02-10T22:09:14,088 Running command Preparing metadata (pyproject.toml) 2026-02-10T22:09:14,730 WARNING: Use build.verbose instead of cmake.verbose for scikit-build-core >= 0.10 2026-02-10T22:09:14,781 *** scikit-build-core 0.11.6 using CMake 3.25.1 (metadata_wheel) 2026-02-10T22:09:14,890 Preparing metadata (pyproject.toml): finished with status 'done' 2026-02-10T22:09:14,894 Source in /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10 has version 0.1.0, which satisfies requirement pyxmipp3==0.1.0 from https://files.pythonhosted.org/packages/58/ed/ec787a7121ed8e4d6be0a5abda6a0f54866ad25589b73c1e8380d77023c0/pyxmipp3-0.1.0.tar.gz 2026-02-10T22:09:14,896 Removed pyxmipp3==0.1.0 from https://files.pythonhosted.org/packages/58/ed/ec787a7121ed8e4d6be0a5abda6a0f54866ad25589b73c1e8380d77023c0/pyxmipp3-0.1.0.tar.gz from build tracker '/tmp/pip-build-tracker-hmxw28wb' 2026-02-10T22:09:14,901 Created temporary directory: /tmp/pip-unpack-m7sxmptp 2026-02-10T22:09:14,901 Building wheels for collected packages: pyxmipp3 2026-02-10T22:09:14,906 Created temporary directory: /tmp/pip-wheel-58slbpcu 2026-02-10T22:09:14,906 Destination directory: /tmp/pip-wheel-58slbpcu 2026-02-10T22:09:14,908 Building wheel for pyxmipp3 (pyproject.toml): started 2026-02-10T22:09:14,909 Running command Building wheel for pyxmipp3 (pyproject.toml) 2026-02-10T22:09:15,537 WARNING: Use build.verbose instead of cmake.verbose for scikit-build-core >= 0.10 2026-02-10T22:09:15,586 *** scikit-build-core 0.11.6 using CMake 3.25.1 (wheel) 2026-02-10T22:09:15,612 *** Configuring CMake... 2026-02-10T22:09:16,011 loading initial cache file /tmp/tmp_k58fmtb/build/CMakeInit.txt 2026-02-10T22:09:16,280 -- The C compiler identification is GNU 12.2.0 2026-02-10T22:09:16,582 -- The CXX compiler identification is GNU 12.2.0 2026-02-10T22:09:16,633 -- Detecting C compiler ABI info 2026-02-10T22:09:16,888 -- Detecting C compiler ABI info - done 2026-02-10T22:09:16,925 -- Check for working C compiler: /usr/bin/arm-linux-gnueabihf-gcc - skipped 2026-02-10T22:09:16,926 -- Detecting C compile features 2026-02-10T22:09:16,928 -- Detecting C compile features - done 2026-02-10T22:09:16,947 -- Detecting CXX compiler ABI info 2026-02-10T22:09:17,298 -- Detecting CXX compiler ABI info - done 2026-02-10T22:09:17,338 -- Check for working CXX compiler: /usr/bin/arm-linux-gnueabihf-g++ - skipped 2026-02-10T22:09:17,340 -- Detecting CXX compile features 2026-02-10T22:09:17,342 -- Detecting CXX compile features - done 2026-02-10T22:09:17,379 -- Performing Test CMAKE_HAVE_LIBC_PTHREAD 2026-02-10T22:09:17,666 -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success 2026-02-10T22:09:17,671 -- Found Threads: TRUE 2026-02-10T22:09:18,889 -- Found Python: /usr/bin/python3 (found version "3.11.2") found components: Interpreter Development.Module NumPy 2026-02-10T22:09:26,811 -- Building tiff version 4.7.1 2026-02-10T22:09:26,823 -- Performing Test C_FLAG_Wall 2026-02-10T22:09:27,292 -- Performing Test C_FLAG_Wall - Success 2026-02-10T22:09:27,297 -- Performing Test C_FLAG_Winline 2026-02-10T22:09:27,590 -- Performing Test C_FLAG_Winline - Success 2026-02-10T22:09:27,594 -- Performing Test C_FLAG_Wformat_security 2026-02-10T22:09:27,853 -- Performing Test C_FLAG_Wformat_security - Success 2026-02-10T22:09:27,858 -- Performing Test C_FLAG_Wpointer_arith 2026-02-10T22:09:28,138 -- Performing Test C_FLAG_Wpointer_arith - Success 2026-02-10T22:09:28,142 -- Performing Test C_FLAG_Wdisabled_optimization 2026-02-10T22:09:28,461 -- Performing Test C_FLAG_Wdisabled_optimization - Success 2026-02-10T22:09:28,466 -- Performing Test C_FLAG_Wno_unknown_pragmas 2026-02-10T22:09:28,750 -- Performing Test C_FLAG_Wno_unknown_pragmas - Success 2026-02-10T22:09:28,755 -- Performing Test C_FLAG_fstrict_aliasing 2026-02-10T22:09:29,009 -- Performing Test C_FLAG_fstrict_aliasing - Success 2026-02-10T22:09:29,014 -- Performing Test HAVE_LD_VERSION_SCRIPT 2026-02-10T22:09:29,822 -- Performing Test HAVE_LD_VERSION_SCRIPT - Success 2026-02-10T22:09:29,835 -- Looking for assert.h 2026-02-10T22:09:30,098 -- Looking for assert.h - found 2026-02-10T22:09:30,100 -- Looking for fcntl.h 2026-02-10T22:09:30,373 -- Looking for fcntl.h - found 2026-02-10T22:09:30,374 -- Looking for io.h 2026-02-10T22:09:30,572 -- Looking for io.h - not found 2026-02-10T22:09:30,574 -- Looking for strings.h 2026-02-10T22:09:30,854 -- Looking for strings.h - found 2026-02-10T22:09:30,856 -- Looking for sys/time.h 2026-02-10T22:09:31,138 -- Looking for sys/time.h - found 2026-02-10T22:09:31,139 -- Looking for sys/types.h 2026-02-10T22:09:31,445 -- Looking for sys/types.h - found 2026-02-10T22:09:31,447 -- Looking for unistd.h 2026-02-10T22:09:31,731 -- Looking for unistd.h - found 2026-02-10T22:09:31,737 -- Looking for getopt 2026-02-10T22:09:32,026 -- Looking for getopt - found 2026-02-10T22:09:32,027 -- Looking for optarg 2026-02-10T22:09:32,339 -- Looking for optarg - found 2026-02-10T22:09:32,340 -- Looking for mmap 2026-02-10T22:09:32,617 -- Looking for mmap - found 2026-02-10T22:09:32,618 -- Looking for setmode 2026-02-10T22:09:32,781 -- Looking for setmode - not found 2026-02-10T22:09:32,795 -- Looking for stdint.h 2026-02-10T22:09:33,128 -- Looking for stdint.h - found 2026-02-10T22:09:33,129 -- Looking for stddef.h 2026-02-10T22:09:33,393 -- Looking for stddef.h - found 2026-02-10T22:09:33,394 -- Check size of size_t 2026-02-10T22:09:33,687 -- Check size of size_t - done 2026-02-10T22:09:33,750 -- Found ZLIB: /usr/lib/arm-linux-gnueabihf/libz.so (found version "1.2.13") 2026-02-10T22:09:33,772 -- Found Deflate: /usr/lib/arm-linux-gnueabihf/libdeflate.so (found version "1.14") 2026-02-10T22:09:34,108 -- Found JPEG: /usr/lib/arm-linux-gnueabihf/libjpeg.so (found version "62") 2026-02-10T22:09:34,114 -- Performing Test HAVE_JPEGTURBO_DUAL_MODE_8_12 2026-02-10T22:09:34,416 -- Performing Test HAVE_JPEGTURBO_DUAL_MODE_8_12 - Failed 2026-02-10T22:09:34,435 -- Found JBIG: /usr/lib/arm-linux-gnueabihf/libjbig.so (found version "2.1") 2026-02-10T22:09:34,437 -- Looking for jbg_newlen 2026-02-10T22:09:34,709 -- Looking for jbg_newlen - found 2026-02-10T22:09:34,728 -- Found LERC: /usr/lib/arm-linux-gnueabihf/libLerc.so (found version "4.0.0") 2026-02-10T22:09:34,745 -- Looking for lzma_auto_decoder in /usr/lib/arm-linux-gnueabihf/liblzma.so 2026-02-10T22:09:35,057 -- Looking for lzma_auto_decoder in /usr/lib/arm-linux-gnueabihf/liblzma.so - found 2026-02-10T22:09:35,058 -- Looking for lzma_easy_encoder in /usr/lib/arm-linux-gnueabihf/liblzma.so 2026-02-10T22:09:35,331 -- Looking for lzma_easy_encoder in /usr/lib/arm-linux-gnueabihf/liblzma.so - found 2026-02-10T22:09:35,332 -- Looking for lzma_lzma_preset in /usr/lib/arm-linux-gnueabihf/liblzma.so 2026-02-10T22:09:35,603 -- Looking for lzma_lzma_preset in /usr/lib/arm-linux-gnueabihf/liblzma.so - found 2026-02-10T22:09:35,608 -- Found liblzma: /usr/lib/arm-linux-gnueabihf/liblzma.so (found version "5.4.1") 2026-02-10T22:09:35,641 -- Found ZSTD: /usr/lib/arm-linux-gnueabihf/libzstd.so (found version "1.5.4") 2026-02-10T22:09:35,643 -- Looking for ZSTD_decompressStream 2026-02-10T22:09:35,964 -- Looking for ZSTD_decompressStream - found 2026-02-10T22:09:35,981 -- Found WebP: /usr/lib/arm-linux-gnueabihf/libwebp.so 2026-02-10T22:09:36,016 -- Found OpenGL: /usr/lib/arm-linux-gnueabihf/libOpenGL.so found components: OpenGL 2026-02-10T22:09:36,339 -- Could NOT find GLUT (missing: GLUT_glut_LIBRARY GLUT_INCLUDE_DIR) 2026-02-10T22:09:36,340 -- Looking for GL/gl.h 2026-02-10T22:09:36,798 -- Looking for GL/gl.h - found 2026-02-10T22:09:36,799 -- Looking for GL/glu.h 2026-02-10T22:09:37,201 -- Looking for GL/glu.h - found 2026-02-10T22:09:37,202 -- Looking for GL/glut.h 2026-02-10T22:09:37,385 -- Looking for GL/glut.h - not found 2026-02-10T22:09:37,387 -- Looking for GLUT/glut.h 2026-02-10T22:09:37,551 -- Looking for GLUT/glut.h - not found 2026-02-10T22:09:37,552 -- Looking for OpenGL/gl.h 2026-02-10T22:09:37,697 -- Looking for OpenGL/gl.h - not found 2026-02-10T22:09:37,698 -- Looking for OpenGL/glu.h 2026-02-10T22:09:37,848 -- Looking for OpenGL/glu.h - not found 2026-02-10T22:09:37,856 -- Looking for pow 2026-02-10T22:09:38,183 -- Looking for pow - not found 2026-02-10T22:09:38,188 -- Looking for pow 2026-02-10T22:09:38,540 -- Looking for pow - found 2026-02-10T22:09:38,545 -- Found CMath: TRUE 2026-02-10T22:09:38,688 -- 2026-02-10T22:09:38,689 -- Libtiff is now configured for Linux-6.1.21-v7l+ 2026-02-10T22:09:38,689 -- 2026-02-10T22:09:38,690 -- Libtiff build version: 4.7.1 2026-02-10T22:09:38,691 -- Libtiff library version: 6.2.0 2026-02-10T22:09:38,691 -- Libtiff release date: 20250911 2026-02-10T22:09:38,692 -- 2026-02-10T22:09:38,692 -- Installation directory: /tmp/tmp_k58fmtb/wheel/platlib 2026-02-10T22:09:38,693 -- Documentation directory: share/doc/pyxmipp3 2026-02-10T22:09:38,693 -- C compiler: /usr/bin/arm-linux-gnueabihf-gcc 2026-02-10T22:09:38,694 -- C++ compiler: /usr/bin/arm-linux-gnueabihf-g++ 2026-02-10T22:09:38,694 -- Build shared libraries: OFF 2026-02-10T22:09:38,694 -- Build tools: OFF 2026-02-10T22:09:38,695 -- Build tests: ON 2026-02-10T22:09:38,695 -- Build contrib: ON 2026-02-10T22:09:38,696 -- Build docs: OFF 2026-02-10T22:09:38,696 -- Build deprecated features: OFF 2026-02-10T22:09:38,697 -- Enable linker symbol versioning: TRUE 2026-02-10T22:09:38,697 -- Support Microsoft Document Imaging: ON 2026-02-10T22:09:38,698 -- Use win32 IO: OFF 2026-02-10T22:09:38,698 -- 2026-02-10T22:09:38,698 -- Support for internal codecs: 2026-02-10T22:09:38,699 -- CCITT Group 3 & 4 algorithms: ON 2026-02-10T22:09:38,699 -- Macintosh PackBits algorithm: ON 2026-02-10T22:09:38,700 -- LZW algorithm: ON 2026-02-10T22:09:38,700 -- ThunderScan 4-bit RLE algorithm: ON 2026-02-10T22:09:38,701 -- NeXT 2-bit RLE algorithm: ON 2026-02-10T22:09:38,701 -- LogLuv high dynamic range encoding: ON 2026-02-10T22:09:38,701 -- 2026-02-10T22:09:38,702 -- Support for external codecs: 2026-02-10T22:09:38,702 -- ZLIB support: Requested:ON Availability:TRUE Support:TRUE 2026-02-10T22:09:38,703 -- libdeflate support: Requested:ON Availability:TRUE Support:TRUE 2026-02-10T22:09:38,703 -- Pixar log-format algorithm: Requested:ON Availability:TRUE Support:TRUE 2026-02-10T22:09:38,704 -- JPEG support: Requested:ON Availability:TRUE Support:TRUE 2026-02-10T22:09:38,704 -- Old JPEG support: Requested:ON Availability:TRUE Support:TRUE 2026-02-10T22:09:38,705 -- JPEG 8/12 bit dual mode: Requested:OFF Availability:FALSE Support:FALSE 2026-02-10T22:09:38,705 -- ISO JBIG support: Requested:ON Availability:TRUE Support:TRUE 2026-02-10T22:09:38,706 -- LERC support: Requested:ON Availability:TRUE Support:TRUE 2026-02-10T22:09:38,706 -- LZMA2 support: Requested:ON Availability:TRUE Support:TRUE 2026-02-10T22:09:38,707 -- ZSTD support: Requested:ON Availability:TRUE Support:TRUE 2026-02-10T22:09:38,707 -- WEBP support: Requested:ON Availability:TRUE Support:TRUE 2026-02-10T22:09:38,708 -- 2026-02-10T22:09:38,708 -- C++ support: ON (requested) TRUE (availability) 2026-02-10T22:09:38,709 -- 2026-02-10T22:09:38,709 -- OpenGL support: Requested:OFF Availability:FALSE Support:FALSE 2026-02-10T22:09:38,710 -- 2026-02-10T22:09:38,806 -- Configuring done 2026-02-10T22:09:39,399 -- Generating done 2026-02-10T22:09:39,591 -- Build files have been written to: /tmp/tmp_k58fmtb/build 2026-02-10T22:09:39,712 *** Building project with Ninja... 2026-02-10T22:09:39,972 [1/297] Creating directories for 'fftw3_float_external' 2026-02-10T22:09:39,982 [2/297] Creating directories for 'hdf5_external' 2026-02-10T22:09:39,989 [3/297] Creating directories for 'fftw3_double_external' 2026-02-10T22:09:40,020 [4/297] Creating directories for 'libjpeg_external' 2026-02-10T22:09:40,521 [5/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_aux.c.o 2026-02-10T22:09:40,777 [6/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_close.c.o 2026-02-10T22:09:41,003 [7/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_codec.c.o 2026-02-10T22:09:41,711 [8/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_color.c.o 2026-02-10T22:09:42,739 [9/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_compress.c.o 2026-02-10T22:09:42,875 [10/297] Performing download step (download, verify and extract) for 'libjpeg_external' 2026-02-10T22:09:43,081 [11/297] No update step for 'libjpeg_external' 2026-02-10T22:09:43,241 [12/297] No patch step for 'libjpeg_external' 2026-02-10T22:09:46,034 [13/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_dir.c.o 2026-02-10T22:09:47,266 [14/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_dirinfo.c.o 2026-02-10T22:09:47,623 [15/297] Performing download step (download, verify and extract) for 'fftw3_double_external' 2026-02-10T22:09:47,774 [16/297] Performing download step (download, verify and extract) for 'fftw3_float_external' 2026-02-10T22:09:47,816 [17/297] No update step for 'fftw3_double_external' 2026-02-10T22:09:48,036 [18/297] No update step for 'fftw3_float_external' 2026-02-10T22:09:48,093 [19/297] No patch step for 'fftw3_double_external' 2026-02-10T22:09:48,300 [20/297] No patch step for 'fftw3_float_external' 2026-02-10T22:09:55,123 [21/297] Performing download step (download, verify and extract) for 'hdf5_external' 2026-02-10T22:09:55,329 [22/297] No update step for 'hdf5_external' 2026-02-10T22:09:55,558 [23/297] No patch step for 'hdf5_external' 2026-02-10T22:09:56,797 [24/297] Performing configure step for 'libjpeg_external' 2026-02-10T22:10:01,920 [25/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_dirread.c.o 2026-02-10T22:10:17,912 [26/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_dirwrite.c.o 2026-02-10T22:10:18,589 [27/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_dumpmode.c.o 2026-02-10T22:10:19,401 [28/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_error.c.o 2026-02-10T22:10:20,181 [29/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_extension.c.o 2026-02-10T22:10:40,254 [30/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_fax3.c.o 2026-02-10T22:10:41,430 [31/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_fax3sm.c.o 2026-02-10T22:10:42,197 [32/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_flush.c.o 2026-02-10T22:10:52,150 [33/297] Performing configure step for 'fftw3_double_external' 2026-02-10T22:10:54,748 [34/297] Performing configure step for 'fftw3_float_external' 2026-02-10T22:10:59,918 [35/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_getimage.c.o 2026-02-10T22:11:01,589 [36/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_hash_set.c.o 2026-02-10T22:11:02,694 [37/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_jbig.c.o 2026-02-10T22:11:14,645 [38/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_jpeg.c.o 2026-02-10T22:11:15,371 [39/297] Performing build step for 'libjpeg_external' 2026-02-10T22:11:15,413 [40/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_jpeg_12.c.o 2026-02-10T22:11:16,060 [41/297] Performing install step for 'libjpeg_external' 2026-02-10T22:11:16,061 -- Install configuration: "Release" 2026-02-10T22:11:16,062 -- Installing: /tmp/tmp_k58fmtb/build/external/libjpeg-turbo/lib/libjpeg.a 2026-02-10T22:11:16,063 -- Installing: /tmp/tmp_k58fmtb/build/external/libjpeg-turbo/bin/cjpeg 2026-02-10T22:11:16,077 -- Installing: /tmp/tmp_k58fmtb/build/external/libjpeg-turbo/bin/djpeg 2026-02-10T22:11:16,078 -- Installing: /tmp/tmp_k58fmtb/build/external/libjpeg-turbo/bin/jpegtran 2026-02-10T22:11:16,080 -- Installing: /tmp/tmp_k58fmtb/build/external/libjpeg-turbo/bin/rdjpgcom 2026-02-10T22:11:16,083 -- Installing: /tmp/tmp_k58fmtb/build/external/libjpeg-turbo/bin/wrjpgcom 2026-02-10T22:11:16,088 -- Installing: /tmp/tmp_k58fmtb/build/external/libjpeg-turbo/share/doc/libjpeg-turbo/README.ijg 2026-02-10T22:11:16,092 -- Installing: /tmp/tmp_k58fmtb/build/external/libjpeg-turbo/share/doc/libjpeg-turbo/README.md 2026-02-10T22:11:16,093 -- Installing: /tmp/tmp_k58fmtb/build/external/libjpeg-turbo/share/doc/libjpeg-turbo/example.c 2026-02-10T22:11:16,094 -- Installing: /tmp/tmp_k58fmtb/build/external/libjpeg-turbo/share/doc/libjpeg-turbo/tjcomp.c 2026-02-10T22:11:16,095 -- Installing: /tmp/tmp_k58fmtb/build/external/libjpeg-turbo/share/doc/libjpeg-turbo/tjdecomp.c 2026-02-10T22:11:16,095 -- Installing: /tmp/tmp_k58fmtb/build/external/libjpeg-turbo/share/doc/libjpeg-turbo/tjtran.c 2026-02-10T22:11:16,098 -- Installing: /tmp/tmp_k58fmtb/build/external/libjpeg-turbo/share/doc/libjpeg-turbo/libjpeg.txt 2026-02-10T22:11:16,098 -- Installing: /tmp/tmp_k58fmtb/build/external/libjpeg-turbo/share/doc/libjpeg-turbo/structure.txt 2026-02-10T22:11:16,099 -- Installing: /tmp/tmp_k58fmtb/build/external/libjpeg-turbo/share/doc/libjpeg-turbo/usage.txt 2026-02-10T22:11:16,100 -- Installing: /tmp/tmp_k58fmtb/build/external/libjpeg-turbo/share/doc/libjpeg-turbo/wizard.txt 2026-02-10T22:11:16,100 -- Installing: /tmp/tmp_k58fmtb/build/external/libjpeg-turbo/share/doc/libjpeg-turbo/LICENSE.md 2026-02-10T22:11:16,101 -- Installing: /tmp/tmp_k58fmtb/build/external/libjpeg-turbo/share/man/man1/cjpeg.1 2026-02-10T22:11:16,105 -- Installing: /tmp/tmp_k58fmtb/build/external/libjpeg-turbo/share/man/man1/djpeg.1 2026-02-10T22:11:16,115 -- Installing: /tmp/tmp_k58fmtb/build/external/libjpeg-turbo/share/man/man1/jpegtran.1 2026-02-10T22:11:16,118 -- Installing: /tmp/tmp_k58fmtb/build/external/libjpeg-turbo/share/man/man1/rdjpgcom.1 2026-02-10T22:11:16,119 -- Installing: /tmp/tmp_k58fmtb/build/external/libjpeg-turbo/share/man/man1/wrjpgcom.1 2026-02-10T22:11:16,126 -- Installing: /tmp/tmp_k58fmtb/build/external/libjpeg-turbo/lib/pkgconfig/libjpeg.pc 2026-02-10T22:11:16,127 -- Installing: /tmp/tmp_k58fmtb/build/external/libjpeg-turbo/lib/cmake/libjpeg-turbo/libjpeg-turboConfig.cmake 2026-02-10T22:11:16,128 -- Installing: /tmp/tmp_k58fmtb/build/external/libjpeg-turbo/lib/cmake/libjpeg-turbo/libjpeg-turboConfigVersion.cmake 2026-02-10T22:11:16,130 -- Installing: /tmp/tmp_k58fmtb/build/external/libjpeg-turbo/lib/cmake/libjpeg-turbo/libjpeg-turboTargets.cmake 2026-02-10T22:11:16,131 -- Installing: /tmp/tmp_k58fmtb/build/external/libjpeg-turbo/lib/cmake/libjpeg-turbo/libjpeg-turboTargets-release.cmake 2026-02-10T22:11:16,132 -- Installing: /tmp/tmp_k58fmtb/build/external/libjpeg-turbo/include/jconfig.h 2026-02-10T22:11:16,133 -- Installing: /tmp/tmp_k58fmtb/build/external/libjpeg-turbo/include/jerror.h 2026-02-10T22:11:16,134 -- Installing: /tmp/tmp_k58fmtb/build/external/libjpeg-turbo/include/jmorecfg.h 2026-02-10T22:11:16,137 -- Installing: /tmp/tmp_k58fmtb/build/external/libjpeg-turbo/include/jpeglib.h 2026-02-10T22:11:16,789 [42/297] Completed 'libjpeg_external' 2026-02-10T22:11:23,219 [43/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_lerc.c.o 2026-02-10T22:11:25,501 [44/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_lzma.c.o 2026-02-10T22:11:26,399 [45/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_luv.c.o 2026-02-10T22:11:28,070 [46/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_next.c.o 2026-02-10T22:11:31,019 [47/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_lzw.c.o 2026-02-10T22:11:34,590 [48/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_open.c.o 2026-02-10T22:11:36,702 [49/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_packbits.c.o 2026-02-10T22:11:41,822 [50/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_ojpeg.c.o 2026-02-10T22:11:49,292 [51/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_pixarlog.c.o 2026-02-10T22:11:49,758 [52/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_predict.c.o 2026-02-10T22:11:54,360 [53/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_print.c.o 2026-02-10T22:11:55,764 [54/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_read.c.o 2026-02-10T22:11:56,040 [55/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_strip.c.o 2026-02-10T22:11:57,561 [56/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_thunder.c.o 2026-02-10T22:11:57,679 [57/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_swab.c.o 2026-02-10T22:11:58,491 [58/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_version.c.o 2026-02-10T22:11:59,634 [59/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_warning.c.o 2026-02-10T22:11:59,664 [60/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_tile.c.o 2026-02-10T22:12:02,680 [61/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_webp.c.o 2026-02-10T22:12:03,969 [62/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_write.c.o 2026-02-10T22:12:05,597 [63/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_zip.c.o 2026-02-10T22:12:05,909 [64/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_zstd.c.o 2026-02-10T22:12:07,599 [65/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_unix.c.o 2026-02-10T22:12:09,395 [66/297] Linking C static library _deps/libtiff-build/libtiff/libtiff.a 2026-02-10T22:12:12,297 [67/297] Building C object _deps/libtiff-build/test/CMakeFiles/test_signed_tags.dir/test_signed_tags.c.o 2026-02-10T22:12:14,114 [68/297] Linking CXX executable _deps/libtiff-build/test/test_signed_tags 2026-02-10T22:12:15,249 [69/297] Building C object _deps/libtiff-build/test/CMakeFiles/ascii_tag.dir/ascii_tag.c.o 2026-02-10T22:12:15,595 [70/297] Building CXX object _deps/libtiff-build/libtiff/CMakeFiles/tiffxx.dir/tif_stream.cxx.o 2026-02-10T22:12:16,713 [71/297] Linking CXX static library _deps/libtiff-build/libtiff/libtiffxx.a 2026-02-10T22:12:16,955 [72/297] Linking CXX executable _deps/libtiff-build/test/ascii_tag 2026-02-10T22:12:17,642 [73/297] Building C object _deps/libtiff-build/test/CMakeFiles/long_tag.dir/long_tag.c.o 2026-02-10T22:12:17,800 [74/297] Building C object _deps/libtiff-build/test/CMakeFiles/long_tag.dir/check_tag.c.o 2026-02-10T22:12:19,076 [75/297] Building C object _deps/libtiff-build/test/CMakeFiles/short_tag.dir/short_tag.c.o 2026-02-10T22:12:19,487 [76/297] Linking CXX executable _deps/libtiff-build/test/long_tag 2026-02-10T22:12:19,881 [77/297] Building C object _deps/libtiff-build/test/CMakeFiles/short_tag.dir/check_tag.c.o 2026-02-10T22:12:20,458 [78/297] Building C object _deps/libtiff-build/test/CMakeFiles/strip_rw.dir/strip_rw.c.o 2026-02-10T22:12:21,407 [79/297] Linking CXX executable _deps/libtiff-build/test/short_tag 2026-02-10T22:12:22,002 [80/297] Building C object _deps/libtiff-build/test/CMakeFiles/strip_rw.dir/strip.c.o 2026-02-10T22:12:22,124 [81/297] Building C object _deps/libtiff-build/test/CMakeFiles/strip_rw.dir/test_arrays.c.o 2026-02-10T22:12:23,942 [82/297] Linking CXX executable _deps/libtiff-build/test/strip_rw 2026-02-10T22:12:24,408 [83/297] Building C object _deps/libtiff-build/test/CMakeFiles/rewrite.dir/rewrite_tag.c.o 2026-02-10T22:12:25,548 [84/297] Building C object _deps/libtiff-build/test/CMakeFiles/raw_decode.dir/raw_decode.c.o 2026-02-10T22:12:26,131 [85/297] Linking CXX executable _deps/libtiff-build/test/rewrite 2026-02-10T22:12:27,374 [86/297] Linking CXX executable _deps/libtiff-build/test/raw_decode 2026-02-10T22:12:27,730 [87/297] Building C object _deps/libtiff-build/test/CMakeFiles/custom_dir.dir/custom_dir.c.o 2026-02-10T22:12:29,194 [88/297] Linking CXX executable _deps/libtiff-build/test/custom_dir 2026-02-10T22:12:31,939 [89/297] Building C object _deps/libtiff-build/test/CMakeFiles/rational_precision2double.dir/rational_precision2double.c.o 2026-02-10T22:12:33,651 [90/297] Linking CXX executable _deps/libtiff-build/test/rational_precision2double 2026-02-10T22:12:35,728 [91/297] Building C object _deps/libtiff-build/test/CMakeFiles/test_transferfunction_write_read.dir/test_transferfunction_write_read.c.o 2026-02-10T22:12:37,190 [92/297] Linking CXX executable _deps/libtiff-build/test/test_transferfunction_write_read 2026-02-10T22:12:38,807 [93/297] Building C object _deps/libtiff-build/test/CMakeFiles/test_write_read_tags.dir/test_write_read_tags.c.o 2026-02-10T22:12:40,541 [94/297] Linking CXX executable _deps/libtiff-build/test/test_write_read_tags 2026-02-10T22:12:42,223 [95/297] Building C object _deps/libtiff-build/test/CMakeFiles/defer_strile_loading.dir/defer_strile_loading.c.o 2026-02-10T22:12:43,911 [96/297] Linking CXX executable _deps/libtiff-build/test/defer_strile_loading 2026-02-10T22:12:45,258 [97/297] Building C object _deps/libtiff-build/test/CMakeFiles/custom_dir_EXIF_231.dir/custom_dir_EXIF_231.c.o 2026-02-10T22:12:46,068 [98/297] Building C object _deps/libtiff-build/test/CMakeFiles/defer_strile_writing.dir/defer_strile_writing.c.o 2026-02-10T22:12:46,721 [99/297] Linking CXX executable _deps/libtiff-build/test/custom_dir_EXIF_231 2026-02-10T22:12:47,628 [100/297] Linking CXX executable _deps/libtiff-build/test/defer_strile_writing 2026-02-10T22:12:56,553 [101/297] Building C object _deps/libtiff-build/test/CMakeFiles/test_directory.dir/test_directory.c.o 2026-02-10T22:12:58,141 [102/297] Linking CXX executable _deps/libtiff-build/test/test_directory 2026-02-10T22:12:58,800 [103/297] Building C object _deps/libtiff-build/test/CMakeFiles/testtypes.dir/testtypes.c.o 2026-02-10T22:12:59,643 [104/297] Linking CXX executable _deps/libtiff-build/test/testtypes 2026-02-10T22:13:00,233 [105/297] Building C object _deps/libtiff-build/test/CMakeFiles/test_IFD_enlargement.dir/test_IFD_enlargement.c.o 2026-02-10T22:13:01,812 [106/297] Linking CXX executable _deps/libtiff-build/test/test_IFD_enlargement 2026-02-10T22:13:02,066 [107/297] Performing configure step for 'hdf5_external' 2026-02-10T22:13:02,336 [108/297] Building C object _deps/libtiff-build/test/CMakeFiles/test_open_options.dir/test_open_options.c.o 2026-02-10T22:13:02,779 [109/297] Building C object _deps/libtiff-build/test/CMakeFiles/test_append_to_strip.dir/test_append_to_strip.c.o 2026-02-10T22:13:04,131 [110/297] Linking CXX executable _deps/libtiff-build/test/test_open_options 2026-02-10T22:13:04,711 [111/297] Linking CXX executable _deps/libtiff-build/test/test_append_to_strip 2026-02-10T22:13:05,911 [112/297] Building C object _deps/libtiff-build/test/CMakeFiles/test_ifd_loop_detection.dir/test_ifd_loop_detection.c.o 2026-02-10T22:13:08,152 [113/297] Linking CXX executable _deps/libtiff-build/test/test_ifd_loop_detection 2026-02-10T22:13:09,217 [114/297] Building C object _deps/libtiff-build/contrib/addtiffo/CMakeFiles/addtiffo.dir/addtiffo.c.o 2026-02-10T22:13:12,388 [115/297] Building C object _deps/libtiff-build/test/CMakeFiles/test_RGBAImage.dir/test_RGBAImage.c.o 2026-02-10T22:13:14,644 [116/297] Linking CXX executable _deps/libtiff-build/test/test_RGBAImage 2026-02-10T22:13:16,790 [117/297] Building C object _deps/libtiff-build/contrib/addtiffo/CMakeFiles/addtiffo.dir/tif_overview.c.o 2026-02-10T22:13:17,042 [118/297] Building C object _deps/libtiff-build/contrib/addtiffo/CMakeFiles/addtiffo.dir/tif_ovrcache.c.o 2026-02-10T22:13:17,693 [119/297] Building C object _deps/libtiff-build/contrib/dbs/CMakeFiles/tiff-bi.dir/tiff-bi.c.o 2026-02-10T22:13:19,221 [120/297] Linking CXX executable _deps/libtiff-build/contrib/addtiffo/addtiffo 2026-02-10T22:13:19,872 [121/297] Linking CXX executable _deps/libtiff-build/contrib/dbs/tiff-bi 2026-02-10T22:13:21,198 [122/297] Building C object _deps/libtiff-build/contrib/dbs/CMakeFiles/tiff-grayscale.dir/tiff-grayscale.c.o 2026-02-10T22:13:22,049 [123/297] Building C object _deps/libtiff-build/contrib/dbs/CMakeFiles/tiff-palette.dir/tiff-palette.c.o 2026-02-10T22:13:23,482 [124/297] Linking CXX executable _deps/libtiff-build/contrib/dbs/tiff-grayscale 2026-02-10T22:13:24,299 [125/297] Linking CXX executable _deps/libtiff-build/contrib/dbs/tiff-palette 2026-02-10T22:13:26,170 [126/297] Building C object _deps/libtiff-build/contrib/dbs/CMakeFiles/tiff-rgb.dir/tiff-rgb.c.o 2026-02-10T22:13:28,502 [127/297] Linking CXX executable _deps/libtiff-build/contrib/dbs/tiff-rgb 2026-02-10T22:13:28,859 [128/297] Building C object _deps/libtiff-build/contrib/iptcutil/CMakeFiles/iptcutil.dir/iptcutil.c.o 2026-02-10T22:13:30,180 [129/297] Linking CXX executable _deps/libtiff-build/contrib/iptcutil/iptcutil 2026-02-10T22:14:20,067 [130/297] Performing build step for 'fftw3_float_external' 2026-02-10T22:14:20,610 [131/297] Performing install step for 'fftw3_float_external' 2026-02-10T22:14:20,611 -- Install configuration: "Release" 2026-02-10T22:14:20,612 -- Installing: /tmp/tmp_k58fmtb/build/external/fftw3/lib/libfftw3f.a 2026-02-10T22:14:20,613 -- Installing: /tmp/tmp_k58fmtb/build/external/fftw3/lib/libfftw3f_threads.a 2026-02-10T22:14:20,613 -- Up-to-date: /tmp/tmp_k58fmtb/build/external/fftw3/lib/libfftw3f.a 2026-02-10T22:14:20,614 -- Installing: /tmp/tmp_k58fmtb/build/external/fftw3/include/fftw3.h 2026-02-10T22:14:20,616 -- Installing: /tmp/tmp_k58fmtb/build/external/fftw3/include/fftw3.f 2026-02-10T22:14:20,617 -- Installing: /tmp/tmp_k58fmtb/build/external/fftw3/include/fftw3l.f03 2026-02-10T22:14:20,617 -- Installing: /tmp/tmp_k58fmtb/build/external/fftw3/include/fftw3q.f03 2026-02-10T22:14:20,618 -- Installing: /tmp/tmp_k58fmtb/build/external/fftw3/include/fftw3.f03 2026-02-10T22:14:20,619 -- Installing: /tmp/tmp_k58fmtb/build/external/fftw3/lib/pkgconfig/fftw3f.pc 2026-02-10T22:14:20,620 -- Installing: /tmp/tmp_k58fmtb/build/external/fftw3/lib/cmake/fftw3f/FFTW3fConfig.cmake 2026-02-10T22:14:20,621 -- Installing: /tmp/tmp_k58fmtb/build/external/fftw3/lib/cmake/fftw3f/FFTW3fConfigVersion.cmake 2026-02-10T22:14:20,622 -- Installing: /tmp/tmp_k58fmtb/build/external/fftw3/lib/cmake/fftw3f/FFTW3LibraryDepends.cmake 2026-02-10T22:14:20,623 -- Installing: /tmp/tmp_k58fmtb/build/external/fftw3/lib/cmake/fftw3f/FFTW3LibraryDepends-release.cmake 2026-02-10T22:14:21,027 [132/297] Completed 'fftw3_float_external' 2026-02-10T22:14:32,837 [133/297] Performing build step for 'fftw3_double_external' 2026-02-10T22:14:33,194 [134/297] Performing install step for 'fftw3_double_external' 2026-02-10T22:14:33,195 -- Install configuration: "Release" 2026-02-10T22:14:33,195 -- Installing: /tmp/tmp_k58fmtb/build/external/fftw3/lib/libfftw3.a 2026-02-10T22:14:33,196 -- Installing: /tmp/tmp_k58fmtb/build/external/fftw3/lib/libfftw3_threads.a 2026-02-10T22:14:33,197 -- Up-to-date: /tmp/tmp_k58fmtb/build/external/fftw3/lib/libfftw3.a 2026-02-10T22:14:33,198 -- Up-to-date: /tmp/tmp_k58fmtb/build/external/fftw3/include/fftw3.h 2026-02-10T22:14:33,199 -- Up-to-date: /tmp/tmp_k58fmtb/build/external/fftw3/include/fftw3.f 2026-02-10T22:14:33,200 -- Up-to-date: /tmp/tmp_k58fmtb/build/external/fftw3/include/fftw3l.f03 2026-02-10T22:14:33,201 -- Up-to-date: /tmp/tmp_k58fmtb/build/external/fftw3/include/fftw3q.f03 2026-02-10T22:14:33,201 -- Installing: /tmp/tmp_k58fmtb/build/external/fftw3/include/fftw3.f03 2026-02-10T22:14:33,202 -- Installing: /tmp/tmp_k58fmtb/build/external/fftw3/lib/pkgconfig/fftw3.pc 2026-02-10T22:14:33,203 -- Installing: /tmp/tmp_k58fmtb/build/external/fftw3/lib/cmake/fftw3/FFTW3Config.cmake 2026-02-10T22:14:33,204 -- Installing: /tmp/tmp_k58fmtb/build/external/fftw3/lib/cmake/fftw3/FFTW3ConfigVersion.cmake 2026-02-10T22:14:33,205 -- Installing: /tmp/tmp_k58fmtb/build/external/fftw3/lib/cmake/fftw3/FFTW3LibraryDepends.cmake 2026-02-10T22:14:33,206 -- Installing: /tmp/tmp_k58fmtb/build/external/fftw3/lib/cmake/fftw3/FFTW3LibraryDepends-release.cmake 2026-02-10T22:14:33,583 [135/297] Completed 'fftw3_double_external' 2026-02-10T22:17:05,595 [136/297] Performing build step for 'hdf5_external' 2026-02-10T22:17:13,776 [137/297] Performing install step for 'hdf5_external' 2026-02-10T22:17:13,777 -- Install configuration: "" 2026-02-10T22:17:13,778 -- Installing: /tmp/tmp_k58fmtb/build/external/hdf5/include/hdf5.h 2026-02-10T22:17:13,779 -- Installing: /tmp/tmp_k58fmtb/build/external/hdf5/include/H5api_adpt.h 2026-02-10T22:17:13,779 -- Installing: /tmp/tmp_k58fmtb/build/external/hdf5/include/H5encode.h 2026-02-10T22:17:13,780 -- Installing: /tmp/tmp_k58fmtb/build/external/hdf5/include/H5public.h 2026-02-10T22:17:13,780 -- Installing: /tmp/tmp_k58fmtb/build/external/hdf5/include/H5Apublic.h 2026-02-10T22:17:13,781 -- Installing: /tmp/tmp_k58fmtb/build/external/hdf5/include/H5ACpublic.h 2026-02-10T22:17:13,781 -- Installing: 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src/CMakeFiles/xmippLib.dir/core/bilib/dht.cc.o 2026-02-10T22:18:31,192 [168/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/gradient.cc.o 2026-02-10T22:18:32,941 [169/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/alglib/linalg.cpp.o 2026-02-10T22:18:33,002 [170/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/histogram.cc.o 2026-02-10T22:18:33,831 [171/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/firconvolve.cc.o 2026-02-10T22:18:34,274 [172/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/iirconvolve.cc.o 2026-02-10T22:18:35,092 [173/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/kernel.cc.o 2026-02-10T22:18:35,222 [174/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/kerneldiff1.cc.o 2026-02-10T22:18:35,559 [175/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/kerneldiff.cc.o 2026-02-10T22:18:35,569 [176/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/messagedisplay.cc.o 2026-02-10T22:18:35,825 [177/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/minmax.cc.o 2026-02-10T22:18:36,231 [178/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/interpolate.cc.o 2026-02-10T22:18:36,568 [179/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/kerneldiff2.cc.o 2026-02-10T22:18:37,411 [180/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/movingaverage.cc.o 2026-02-10T22:18:37,471 [181/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/kernelintegrate.cc.o 2026-02-10T22:18:38,182 [182/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/positivepower.cc.o 2026-02-10T22:18:38,366 [183/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/pyramidfilters.cc.o 2026-02-10T22:18:39,060 [184/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/swap.cc.o 2026-02-10T22:18:39,125 [185/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/polynomial.cc.o 2026-02-10T22:18:39,505 [186/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/timestamp.cc.o 2026-02-10T22:18:39,823 [187/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/round.cc.o 2026-02-10T22:18:40,401 [188/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/wavelet.cc.o 2026-02-10T22:18:40,436 [189/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/morphology.cc.o 2026-02-10T22:18:40,604 [190/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/traceline.cc.o 2026-02-10T22:18:42,080 [191/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/waveletfilters.cc.o 2026-02-10T22:18:42,165 [192/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/window.cc.o 2026-02-10T22:18:42,629 [193/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/waveletfiltersfract.cc.o 2026-02-10T22:18:42,753 [194/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/pyramidtools.cc.o 2026-02-10T22:18:43,801 [195/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/wavelettools.cc.o 2026-02-10T22:18:44,773 [196/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/linearalgebra.cc.o 2026-02-10T22:18:46,011 [197/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/comment_list.cpp.o 2026-02-10T22:18:53,459 [198/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/linear_system_helper.cpp.o 2026-02-10T22:19:07,165 [199/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/histogram.cpp.o 2026-02-10T22:19:14,535 [200/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/metadata_base.cpp.o 2026-02-10T22:19:22,964 [201/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/geometry.cpp.o 2026-02-10T22:19:22,965 In file included from /usr/include/c++/12/vector:70, 2026-02-10T22:19:22,966 from /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/matrix1d.h:31, 2026-02-10T22:19:22,967 from /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.h:34, 2026-02-10T22:19:22,968 from /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/geometry.h:29, 2026-02-10T22:19:22,969 from /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/geometry.cpp:29: 2026-02-10T22:19:22,970 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: 2026-02-10T22:19:22,971 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 2026-02-10T22:19:22,972 439 | vector<_Tp, _Alloc>:: 2026-02-10T22:19:22,972 | ^~~~~~~~~~~~~~~~~~~ 2026-02-10T22:19:22,973 In file included from /usr/include/c++/12/vector:64: 2026-02-10T22:19:22,975 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, 2026-02-10T22:19:22,976 inlined from ‘void computeCircleAroundE(const Matrix2D&, double, double, std::vector >&)’ at /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/geometry.cpp:1111:36: 2026-02-10T22:19:22,977 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2026-02-10T22:19:22,978 1287 | _M_realloc_insert(end(), __x); 2026-02-10T22:19:22,979 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2026-02-10T22:19:22,980 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, 2026-02-10T22:19:22,981 inlined from ‘void computeCircleAroundE(const Matrix2D&, double, double, std::vector >&)’ at /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/geometry.cpp:1112:36: 2026-02-10T22:19:22,982 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2026-02-10T22:19:22,983 1287 | _M_realloc_insert(end(), __x); 2026-02-10T22:19:22,984 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2026-02-10T22:19:22,984 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, 2026-02-10T22:19:22,986 inlined from ‘void computeCircleAroundE(const Matrix2D&, double, double, std::vector >&)’ at /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/geometry.cpp:1113:36: 2026-02-10T22:19:22,987 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2026-02-10T22:19:22,988 1287 | _M_realloc_insert(end(), __x); 2026-02-10T22:19:22,989 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2026-02-10T22:19:26,248 [202/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/metadata_generator.cpp.o 2026-02-10T22:19:28,760 [203/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/matrix1d.cpp.o 2026-02-10T22:19:35,027 [204/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/matrix2d.cpp.o 2026-02-10T22:19:35,027 In file included from /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/numerical_recipes.h:32, 2026-02-10T22:19:35,029 from /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/matrix2d.cpp:29: 2026-02-10T22:19:35,029 In function ‘void free_Tmatrix(T**&, int, int, int, int) [with T = double]’, 2026-02-10T22:19:35,031 inlined from ‘void free_Tmatrix(T**&, int, int, int, int) [with T = double]’ at /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/xmipp_memory.h:61:25, 2026-02-10T22:19:35,032 inlined from ‘void Matrix2D::killAdaptationForNumericalRecipes(T**) const [with T = double]’ at /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/matrix2d.h:890:21: 2026-02-10T22:19:35,033 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/xmipp_memory.h:67:17: warning: ‘void free(void*)’ called on pointer ‘*(double**)((char*))’ with nonzero offset 8 [-Wfree-nonheap-object] 2026-02-10T22:19:35,034 67 | free((char*)(m[i] + nrl)); 2026-02-10T22:19:35,035 | ~~~~^~~~~~~~~~~~~~~~~~~~~ 2026-02-10T22:19:35,036 In function ‘void free_Tmatrix(T**&, int, int, int, int) [with T = int]’, 2026-02-10T22:19:35,037 inlined from ‘void free_Tmatrix(T**&, int, int, int, int) [with T = int]’ at /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/xmipp_memory.h:61:25, 2026-02-10T22:19:35,038 inlined from ‘void Matrix2D::killAdaptationForNumericalRecipes(T**) const [with T = int]’ at /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/matrix2d.h:890:21: 2026-02-10T22:19:35,039 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/xmipp_memory.h:67:17: warning: ‘void free(void*)’ called on pointer ‘*(int**)((char*))’ with nonzero offset 4 [-Wfree-nonheap-object] 2026-02-10T22:19:35,040 67 | free((char*)(m[i] + nrl)); 2026-02-10T22:19:35,041 | ~~~~^~~~~~~~~~~~~~~~~~~~~ 2026-02-10T22:19:35,042 In function ‘void free_Tmatrix(T**&, int, int, int, int) [with T = float]’, 2026-02-10T22:19:35,043 inlined from ‘void free_Tmatrix(T**&, int, int, int, int) [with T = float]’ at /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/xmipp_memory.h:61:25, 2026-02-10T22:19:35,044 inlined from ‘void Matrix2D::killAdaptationForNumericalRecipes(T**) const [with T = float]’ at /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/matrix2d.h:890:21: 2026-02-10T22:19:35,045 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/xmipp_memory.h:67:17: warning: ‘void free(void*)’ called on pointer ‘*(float**)((char*))’ with nonzero offset 4 [-Wfree-nonheap-object] 2026-02-10T22:19:35,046 67 | free((char*)(m[i] + nrl)); 2026-02-10T22:19:35,047 | ~~~~^~~~~~~~~~~~~~~~~~~~~ 2026-02-10T22:19:35,048 In function ‘void free_Tmatrix(T**&, int, int, int, int) [with T = unsigned char]’, 2026-02-10T22:19:35,049 inlined from ‘void free_Tmatrix(T**&, int, int, int, int) [with T = unsigned char]’ at /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/xmipp_memory.h:61:25, 2026-02-10T22:19:35,050 inlined from ‘void Matrix2D::killAdaptationForNumericalRecipes(T**) const [with T = unsigned char]’ at /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/matrix2d.h:890:21: 2026-02-10T22:19:35,051 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/xmipp_memory.h:67:17: warning: ‘void free(void*)’ called on pointer ‘*(unsigned char**)((char*))’ with nonzero offset 1 [-Wfree-nonheap-object] 2026-02-10T22:19:35,052 67 | free((char*)(m[i] + nrl)); 2026-02-10T22:19:35,053 | ~~~~^~~~~~~~~~~~~~~~~~~~~ 2026-02-10T22:19:35,054 In file included from /usr/include/c++/12/vector:70, 2026-02-10T22:19:35,055 from /usr/include/c++/12/queue:61, 2026-02-10T22:19:35,056 from /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/matrix2d.cpp:26: 2026-02-10T22:19:35,057 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {std::complex}; _Tp = std::complex; _Alloc = std::allocator >]’: 2026-02-10T22:19:35,058 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 2026-02-10T22:19:35,065 439 | vector<_Tp, _Alloc>:: 2026-02-10T22:19:35,066 | ^~~~~~~~~~~~~~~~~~~ 2026-02-10T22:19:35,067 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::complex}; _Tp = std::complex; _Alloc = std::allocator >]’, 2026-02-10T22:19:35,068 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = std::complex; _Alloc = std::allocator >]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2026-02-10T22:19:35,069 inlined from ‘void allEigs(const Matrix2D&, std::vector >&)’ at /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/matrix2d.cpp:357:17: 2026-02-10T22:19:35,070 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-02-10T22:19:35,071 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-02-10T22:19:35,072 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-10T22:19:36,255 [205/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/metadata_query.cpp.o 2026-02-10T22:19:36,377 [206/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/metadata_db.cpp.o 2026-02-10T22:19:36,379 In file included from /usr/include/c++/12/vector:70, 2026-02-10T22:19:36,381 from /usr/include/c++/12/bits/random.h:34, 2026-02-10T22:19:36,382 from /usr/include/c++/12/random:49, 2026-02-10T22:19:36,383 from /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/metadata_db.cpp:28: 2026-02-10T22:19:36,384 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = MDObject; _Alloc = std::allocator]’: 2026-02-10T22:19:36,385 /usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2026-02-10T22:19:36,386 523 | vector<_Tp, _Alloc>:: 2026-02-10T22:19:36,388 | ^~~~~~~~~~~~~~~~~~~ 2026-02-10T22:19:36,389 In file included from /usr/include/c++/12/vector:64: 2026-02-10T22:19:36,390 In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = MDObject; _Alloc = std::allocator]’, 2026-02-10T22:19:36,391 inlined from ‘virtual void MetaDataDb::getColumnValues(MDLabel, std::vector&) const’ at /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/metadata_db.cpp:126:21: 2026-02-10T22:19:36,392 /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-02-10T22:19:36,393 1032 | _M_fill_insert(end(), __new_size - size(), __x); 2026-02-10T22:19:36,393 | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-10T22:19:36,394 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const MDLabel&}; _Tp = MDObject; _Alloc = std::allocator]’: 2026-02-10T22:19:36,395 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2026-02-10T22:19:36,396 439 | vector<_Tp, _Alloc>:: 2026-02-10T22:19:36,397 | ^~~~~~~~~~~~~~~~~~~ 2026-02-10T22:19:36,405 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {const MDLabel&}; _Tp = MDObject; _Alloc = std::allocator]’, 2026-02-10T22:19:36,414 inlined from ‘std::vector MetaDataDb::getObjectsForActiveLabels() const’ at /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/metadata_db.cpp:207:28: 2026-02-10T22:19:36,415 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-02-10T22:19:36,416 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-02-10T22:19:36,417 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-10T22:19:38,687 [207/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/metadata_object.cpp.o 2026-02-10T22:19:38,688 In file included from /usr/include/c++/12/vector:70, 2026-02-10T22:19:38,689 from /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/xmipp_strings.h:29, 2026-02-10T22:19:38,691 from /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/metadata_label.h:31, 2026-02-10T22:19:38,692 from /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/metadata_object.h:31, 2026-02-10T22:19:38,693 from /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/metadata_object.cpp:30: 2026-02-10T22:19:38,694 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double&}; _Tp = double; _Alloc = std::allocator]’: 2026-02-10T22:19:38,695 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2026-02-10T22:19:38,696 439 | vector<_Tp, _Alloc>:: 2026-02-10T22:19:38,697 | ^~~~~~~~~~~~~~~~~~~ 2026-02-10T22:19:38,698 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double&}; _Tp = double; _Alloc = std::allocator]’, 2026-02-10T22:19:38,699 inlined from ‘bool MDObject::fromStream(std::istream&, bool)’ at /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/metadata_object.cpp:505:47: 2026-02-10T22:19:38,700 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-02-10T22:19:38,701 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-02-10T22:19:38,702 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-10T22:19:38,725 [208/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/metadata_row_sql.cpp.o 2026-02-10T22:19:45,023 [209/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/metadata_extension.cpp.o 2026-02-10T22:19:45,414 [210/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/metadata_row_vec.cpp.o 2026-02-10T22:19:45,415 In file included from /usr/include/c++/12/vector:70, 2026-02-10T22:19:45,416 from /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/xmipp_strings.h:29, 2026-02-10T22:19:45,417 from /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/metadata_label.h:31, 2026-02-10T22:19:45,418 from /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/metadata_row_base.h:31, 2026-02-10T22:19:45,419 from /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/metadata_row_vec.h:30, 2026-02-10T22:19:45,420 from /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/metadata_row_vec.cpp:29: 2026-02-10T22:19:45,421 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {MDObject}; _Tp = MDObject; _Alloc = std::allocator]’: 2026-02-10T22:19:45,422 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2026-02-10T22:19:45,422 439 | vector<_Tp, _Alloc>:: 2026-02-10T22:19:45,423 | ^~~~~~~~~~~~~~~~~~~ 2026-02-10T22:19:45,424 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {MDObject}; _Tp = MDObject; _Alloc = std::allocator]’, 2026-02-10T22:19:45,426 inlined from ‘size_t MDRowVec::newCol(MDLabel)’ at /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/metadata_row_vec.cpp:167:31: 2026-02-10T22:19:45,427 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-02-10T22:19:45,428 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-02-10T22:19:45,429 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-10T22:19:45,429 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {MDObject}; _Tp = MDObject; _Alloc = std::allocator]’, 2026-02-10T22:19:45,431 inlined from ‘size_t MDRowVec::newCol(MDLabel)’ at /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/metadata_row_vec.cpp:179:23: 2026-02-10T22:19:45,432 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-02-10T22:19:45,432 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-02-10T22:19:45,433 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-10T22:19:45,434 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {MDObject}; _Tp = MDObject; _Alloc = std::allocator]’, 2026-02-10T22:19:45,435 inlined from ‘virtual void MDRowVec::setValue(const MDObject&)’ at /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/metadata_row_vec.cpp:208:31: 2026-02-10T22:19:45,436 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-02-10T22:19:45,437 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-02-10T22:19:45,439 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-10T22:19:47,038 [211/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/multidim_array.cpp.o 2026-02-10T22:19:47,039 FAILED: src/CMakeFiles/xmippLib.dir/core/multidim_array.cpp.o 2026-02-10T22:19:47,040 /usr/bin/arm-linux-gnueabihf-g++ -DxmippLib_EXPORTS -I/tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src -I/api -I/tmp/tmp_k58fmtb/build/_deps/sqlite3-src -I/tmp/tmp_k58fmtb/build/_deps/libtiff-src/libtiff -I/tmp/tmp_k58fmtb/build/_deps/libtiff-build/libtiff -isystem /usr/include/python3.11 -isystem /tmp/pip-build-env-sr7blpuh/overlay/local/lib/python3.11/dist-packages/numpy/core/include -isystem /tmp/tmp_k58fmtb/build/external/hdf5/include -isystem /tmp/tmp_k58fmtb/build/external/fftw3/include -isystem /tmp/tmp_k58fmtb/build/external/libjpeg-turbo/include -O3 -DNDEBUG -fPIC -std=gnu++17 -MD -MT src/CMakeFiles/xmippLib.dir/core/multidim_array.cpp.o -MF src/CMakeFiles/xmippLib.dir/core/multidim_array.cpp.o.d -o src/CMakeFiles/xmippLib.dir/core/multidim_array.cpp.o -c /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.cpp 2026-02-10T22:19:47,041 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.cpp:1138:16: error: template-id ‘mmapFile<>’ for ‘FILE* MultidimArray::mmapFile(bool*&, long unsigned int) const’ does not match any template declaration 2026-02-10T22:19:47,042 1138 | template FILE* MultidimArray::mmapFile(bool*&, unsigned long) const; 2026-02-10T22:19:47,043 | ^~~~~~~~~~~~~~~~~~~ 2026-02-10T22:19:47,044 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.cpp:859:7: note: candidate is: ‘FILE* MultidimArray::mmapFile(T*&, size_t) const [with T = bool; FILE = FILE; size_t = unsigned int]’ 2026-02-10T22:19:47,045 859 | FILE* MultidimArray::mmapFile(T* &_data, size_t nzyxDim) const 2026-02-10T22:19:47,047 | ^~~~~~~~~~~~~~~~ 2026-02-10T22:19:47,048 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.cpp:1139:16: error: template-id ‘mmapFile<>’ for ‘FILE* MultidimArray::mmapFile(float*&, long unsigned int) const’ does not match any template declaration 2026-02-10T22:19:47,049 1139 | template FILE* MultidimArray::mmapFile(float*&, unsigned long) const; 2026-02-10T22:19:47,050 | ^~~~~~~~~~~~~~~~~~~~ 2026-02-10T22:19:47,051 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.cpp:859:7: note: candidate is: ‘FILE* MultidimArray::mmapFile(T*&, size_t) const [with T = float; FILE = FILE; size_t = unsigned int]’ 2026-02-10T22:19:47,052 859 | FILE* MultidimArray::mmapFile(T* &_data, size_t nzyxDim) const 2026-02-10T22:19:47,053 | ^~~~~~~~~~~~~~~~ 2026-02-10T22:19:47,054 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.cpp:1140:16: error: template-id ‘mmapFile<>’ for ‘FILE* MultidimArray::mmapFile(char*&, long unsigned int) const’ does not match any template declaration 2026-02-10T22:19:47,055 1140 | template FILE* MultidimArray::mmapFile(char*&, unsigned long) const; 2026-02-10T22:19:47,056 | ^~~~~~~~~~~~~~~~~~~ 2026-02-10T22:19:47,057 In file included from /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.cpp:30: 2026-02-10T22:19:47,058 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.h:344:11: note: candidate is: ‘FILE* MultidimArray::mmapFile(T*&, size_t) const [with T = char; FILE = FILE; size_t = unsigned int]’ 2026-02-10T22:19:47,059 344 | FILE* mmapFile(T* &_data, size_t nzyxDim) const; 2026-02-10T22:19:47,061 | ^~~~~~~~ 2026-02-10T22:19:47,061 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.cpp:1141:16: error: template-id ‘mmapFile<>’ for ‘FILE* MultidimArray::mmapFile(int*&, long unsigned int) const’ does not match any template declaration 2026-02-10T22:19:47,062 1141 | template FILE* MultidimArray::mmapFile(int*&, unsigned long) const; 2026-02-10T22:19:47,063 | ^~~~~~~~~~~~~~~~~~ 2026-02-10T22:19:47,064 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.h:344:11: note: candidate is: ‘FILE* MultidimArray::mmapFile(T*&, size_t) const [with T = int; FILE = FILE; size_t = unsigned int]’ 2026-02-10T22:19:47,065 344 | FILE* mmapFile(T* &_data, size_t nzyxDim) const; 2026-02-10T22:19:47,075 | ^~~~~~~~ 2026-02-10T22:19:47,076 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.cpp:1142:16: error: template-id ‘mmapFile<>’ for ‘FILE* MultidimArray::mmapFile(long int*&, long unsigned int) const’ does not match any template declaration 2026-02-10T22:19:47,077 1142 | template FILE* MultidimArray::mmapFile(long*&, unsigned long) const; 2026-02-10T22:19:47,078 | ^~~~~~~~~~~~~~~~~~~ 2026-02-10T22:19:47,079 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.cpp:859:7: note: candidate is: ‘FILE* MultidimArray::mmapFile(T*&, size_t) const [with T = long int; FILE = FILE; size_t = unsigned int]’ 2026-02-10T22:19:47,080 859 | FILE* MultidimArray::mmapFile(T* &_data, size_t nzyxDim) const 2026-02-10T22:19:47,081 | ^~~~~~~~~~~~~~~~ 2026-02-10T22:19:47,082 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.cpp:1143:16: error: template-id ‘mmapFile<>’ for ‘FILE* MultidimArray::mmapFile(short int*&, long unsigned int) const’ does not match any template declaration 2026-02-10T22:19:47,082 1143 | template FILE* MultidimArray::mmapFile(short*&, unsigned long) const; 2026-02-10T22:19:47,083 | ^~~~~~~~~~~~~~~~~~~~ 2026-02-10T22:19:47,084 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.cpp:859:7: note: candidate is: ‘FILE* MultidimArray::mmapFile(T*&, size_t) const [with T = short int; FILE = FILE; size_t = unsigned int]’ 2026-02-10T22:19:47,085 859 | FILE* MultidimArray::mmapFile(T* &_data, size_t nzyxDim) const 2026-02-10T22:19:47,087 | ^~~~~~~~~~~~~~~~ 2026-02-10T22:19:47,088 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.cpp:1144:16: error: template-id ‘mmapFile<>’ for ‘FILE* MultidimArray::mmapFile(unsigned char*&, long unsigned int) const’ does not match any template declaration 2026-02-10T22:19:47,090 1144 | template FILE* MultidimArray::mmapFile(unsigned char*&, unsigned long) const; 2026-02-10T22:19:47,092 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-10T22:19:47,093 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.cpp:859:7: note: candidate is: ‘FILE* MultidimArray::mmapFile(T*&, size_t) const [with T = unsigned char; FILE = FILE; size_t = unsigned int]’ 2026-02-10T22:19:47,095 859 | FILE* MultidimArray::mmapFile(T* &_data, size_t nzyxDim) const 2026-02-10T22:19:47,097 | ^~~~~~~~~~~~~~~~ 2026-02-10T22:19:47,099 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.cpp:1145:16: error: template-id ‘mmapFile<>’ for ‘FILE* MultidimArray::mmapFile(unsigned int*&, long unsigned int) const’ does not match any template declaration 2026-02-10T22:19:47,100 1145 | template FILE* MultidimArray::mmapFile(unsigned int*&, unsigned long) const; 2026-02-10T22:19:47,101 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-10T22:19:47,102 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.cpp:859:7: note: candidate is: ‘FILE* MultidimArray::mmapFile(T*&, size_t) const [with T = unsigned int; FILE = FILE; size_t = unsigned int]’ 2026-02-10T22:19:47,103 859 | FILE* MultidimArray::mmapFile(T* &_data, size_t nzyxDim) const 2026-02-10T22:19:47,104 | ^~~~~~~~~~~~~~~~ 2026-02-10T22:19:47,115 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.cpp:1146:16: error: template-id ‘mmapFile<>’ for ‘FILE* MultidimArray::mmapFile(long unsigned int*&, long unsigned int) const’ does not match any template declaration 2026-02-10T22:19:47,125 1146 | template FILE* MultidimArray::mmapFile(unsigned long*&, unsigned long) const; 2026-02-10T22:19:47,126 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-10T22:19:47,127 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.cpp:859:7: note: candidate is: ‘FILE* MultidimArray::mmapFile(T*&, size_t) const [with T = long unsigned int; FILE = FILE; size_t = unsigned int]’ 2026-02-10T22:19:47,128 859 | FILE* MultidimArray::mmapFile(T* &_data, size_t nzyxDim) const 2026-02-10T22:19:47,129 | ^~~~~~~~~~~~~~~~ 2026-02-10T22:19:47,130 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.cpp:1147:16: error: template-id ‘mmapFile<>’ for ‘FILE* MultidimArray::mmapFile(short unsigned int*&, long unsigned int) const’ does not match any template declaration 2026-02-10T22:19:47,131 1147 | template FILE* MultidimArray::mmapFile(unsigned short*&, unsigned long) const; 2026-02-10T22:19:47,133 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-10T22:19:47,134 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.cpp:859:7: note: candidate is: ‘FILE* MultidimArray::mmapFile(T*&, size_t) const [with T = short unsigned int; FILE = FILE; size_t = unsigned int]’ 2026-02-10T22:19:47,135 859 | FILE* MultidimArray::mmapFile(T* &_data, size_t nzyxDim) const 2026-02-10T22:19:47,136 | ^~~~~~~~~~~~~~~~ 2026-02-10T22:19:47,137 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.cpp:1148:16: error: template-id ‘mmapFile<>’ for ‘FILE* MultidimArray >::mmapFile(std::complex*&, long unsigned int) const’ does not match any template declaration 2026-02-10T22:19:47,138 1148 | template FILE* MultidimArray>::mmapFile(std::complex*&, unsigned long) const; 2026-02-10T22:19:47,139 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-10T22:19:47,140 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.h:344:11: note: candidate is: ‘FILE* MultidimArray::mmapFile(T*&, size_t) const [with T = std::complex; FILE = FILE; size_t = unsigned int]’ 2026-02-10T22:19:47,141 344 | FILE* mmapFile(T* &_data, size_t nzyxDim) const; 2026-02-10T22:19:47,142 | ^~~~~~~~ 2026-02-10T22:19:47,143 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.cpp:1149:16: error: template-id ‘mmapFile<>’ for ‘FILE* MultidimArray::mmapFile(half_float::half*&, long unsigned int) const’ does not match any template declaration 2026-02-10T22:19:47,144 1149 | template FILE* MultidimArray::mmapFile(half_float::half*&, unsigned long) const; 2026-02-10T22:19:47,145 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-10T22:19:47,146 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.cpp:859:7: note: candidate is: ‘FILE* MultidimArray::mmapFile(T*&, size_t) const [with T = half_float::half; FILE = FILE; size_t = unsigned int]’ 2026-02-10T22:19:47,147 859 | FILE* MultidimArray::mmapFile(T* &_data, size_t nzyxDim) const 2026-02-10T22:19:47,149 | ^~~~~~~~~~~~~~~~ 2026-02-10T22:19:47,226 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.cpp:1152:15: error: template-id ‘resize<>’ for ‘void MultidimArray::resize(long unsigned int, long unsigned int, long unsigned int, long unsigned int, bool)’ does not match any template declaration 2026-02-10T22:19:47,227 1152 | template void MultidimArray::resize(unsigned long, unsigned long, unsigned long, unsigned long, bool); 2026-02-10T22:19:47,227 | ^~~~~~~~~~~~~~~~~~~ 2026-02-10T22:19:47,228 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.h:490:10: note: candidates are: ‘template void MultidimArray::resize(const MultidimArray&, bool) [with T = bool]’ 2026-02-10T22:19:47,229 490 | void resize(const MultidimArray &v, bool copy = true) 2026-02-10T22:19:47,230 | ^~~~~~ 2026-02-10T22:19:47,231 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.cpp:983:6: note: ‘void MultidimArray::resize(size_t, size_t, size_t, size_t, bool) [with T = bool; size_t = unsigned int]’ 2026-02-10T22:19:47,233 983 | void MultidimArray::resize(size_t Ndim, size_t Zdim, size_t Ydim, size_t Xdim, bool copy) 2026-02-10T22:19:47,234 | ^~~~~~~~~~~~~~~~ 2026-02-10T22:19:47,235 In file included from /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.h:36: 2026-02-10T22:19:47,236 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:761:10: note: ‘void MultidimArrayBase::resize(size_t, size_t, size_t)’ 2026-02-10T22:19:47,237 761 | void resize(size_t Zdim, size_t Ydim, size_t Xdim) 2026-02-10T22:19:47,238 | ^~~~~~ 2026-02-10T22:19:47,239 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:773:10: note: ‘void MultidimArrayBase::resize(size_t, size_t)’ 2026-02-10T22:19:47,240 773 | void resize(size_t Ydim, size_t Xdim) 2026-02-10T22:19:47,241 | ^~~~~~ 2026-02-10T22:19:47,242 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:785:10: note: ‘void MultidimArrayBase::resize(size_t)’ 2026-02-10T22:19:47,243 785 | void resize(size_t Xdim) 2026-02-10T22:19:47,244 | ^~~~~~ 2026-02-10T22:19:47,246 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:793:10: note: ‘void MultidimArrayBase::resize(ArrayDim&, bool)’ 2026-02-10T22:19:47,247 793 | void resize(ArrayDim &adim, bool copy=true); 2026-02-10T22:19:47,248 | ^~~~~~ 2026-02-10T22:19:47,249 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.cpp:1153:15: error: template-id ‘resize<>’ for ‘void MultidimArray::resize(long unsigned int, long unsigned int, long unsigned int, long unsigned int, bool)’ does not match any template declaration 2026-02-10T22:19:47,250 1153 | template void MultidimArray::resize(unsigned long, unsigned long, unsigned long, unsigned long, bool); 2026-02-10T22:19:47,251 | ^~~~~~~~~~~~~~~~~~~~ 2026-02-10T22:19:47,252 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.h:490:10: note: candidates are: ‘template void MultidimArray::resize(const MultidimArray&, bool) [with T = float]’ 2026-02-10T22:19:47,253 490 | void resize(const MultidimArray &v, bool copy = true) 2026-02-10T22:19:47,254 | ^~~~~~ 2026-02-10T22:19:47,255 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.cpp:983:6: note: ‘void MultidimArray::resize(size_t, size_t, size_t, size_t, bool) [with T = float; size_t = unsigned int]’ 2026-02-10T22:19:47,256 983 | void MultidimArray::resize(size_t Ndim, size_t Zdim, size_t Ydim, size_t Xdim, bool copy) 2026-02-10T22:19:47,258 | ^~~~~~~~~~~~~~~~ 2026-02-10T22:19:47,259 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:761:10: note: ‘void MultidimArrayBase::resize(size_t, size_t, size_t)’ 2026-02-10T22:19:47,260 761 | void resize(size_t Zdim, size_t Ydim, size_t Xdim) 2026-02-10T22:19:47,261 | ^~~~~~ 2026-02-10T22:19:47,262 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:773:10: note: ‘void MultidimArrayBase::resize(size_t, size_t)’ 2026-02-10T22:19:47,263 773 | void resize(size_t Ydim, size_t Xdim) 2026-02-10T22:19:47,264 | ^~~~~~ 2026-02-10T22:19:47,265 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:785:10: note: ‘void MultidimArrayBase::resize(size_t)’ 2026-02-10T22:19:47,266 785 | void resize(size_t Xdim) 2026-02-10T22:19:47,266 | ^~~~~~ 2026-02-10T22:19:47,267 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:793:10: note: ‘void MultidimArrayBase::resize(ArrayDim&, bool)’ 2026-02-10T22:19:47,268 793 | void resize(ArrayDim &adim, bool copy=true); 2026-02-10T22:19:47,269 | ^~~~~~ 2026-02-10T22:19:47,270 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.cpp:1154:15: error: template-id ‘resize<>’ for ‘void MultidimArray::resize(long unsigned int, long unsigned int, long unsigned int, long unsigned int, bool)’ does not match any template declaration 2026-02-10T22:19:47,271 1154 | template void MultidimArray::resize(unsigned long, unsigned long, unsigned long, unsigned long, bool); 2026-02-10T22:19:47,272 | ^~~~~~~~~~~~~~~~~~~ 2026-02-10T22:19:47,273 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.h:490:10: note: candidates are: ‘template void MultidimArray::resize(const MultidimArray&, bool) [with T = char]’ 2026-02-10T22:19:47,274 490 | void resize(const MultidimArray &v, bool copy = true) 2026-02-10T22:19:47,275 | ^~~~~~ 2026-02-10T22:19:47,276 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.h:475:10: note: ‘void MultidimArray::resize(size_t, size_t, size_t, size_t, bool) [with T = char; size_t = unsigned int]’ 2026-02-10T22:19:47,277 475 | void resize(size_t Ndim, size_t Zdim, size_t Ydim, size_t Xdim, bool copy=true); 2026-02-10T22:19:47,278 | ^~~~~~ 2026-02-10T22:19:47,279 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:761:10: note: ‘void MultidimArrayBase::resize(size_t, size_t, size_t)’ 2026-02-10T22:19:47,280 761 | void resize(size_t Zdim, size_t Ydim, size_t Xdim) 2026-02-10T22:19:47,281 | ^~~~~~ 2026-02-10T22:19:47,282 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:773:10: note: ‘void MultidimArrayBase::resize(size_t, size_t)’ 2026-02-10T22:19:47,283 773 | void resize(size_t Ydim, size_t Xdim) 2026-02-10T22:19:47,284 | ^~~~~~ 2026-02-10T22:19:47,286 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:785:10: note: ‘void MultidimArrayBase::resize(size_t)’ 2026-02-10T22:19:47,287 785 | void resize(size_t Xdim) 2026-02-10T22:19:47,288 | ^~~~~~ 2026-02-10T22:19:47,289 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:793:10: note: ‘void MultidimArrayBase::resize(ArrayDim&, bool)’ 2026-02-10T22:19:47,290 793 | void resize(ArrayDim &adim, bool copy=true); 2026-02-10T22:19:47,291 | ^~~~~~ 2026-02-10T22:19:47,292 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.cpp:1155:15: error: template-id ‘resize<>’ for ‘void MultidimArray::resize(long unsigned int, long unsigned int, long unsigned int, long unsigned int, bool)’ does not match any template declaration 2026-02-10T22:19:47,293 1155 | template void MultidimArray::resize(unsigned long, unsigned long, unsigned long, unsigned long, bool); 2026-02-10T22:19:47,295 | ^~~~~~~~~~~~~~~~~~~ 2026-02-10T22:19:47,296 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.h:490:10: note: candidates are: ‘template void MultidimArray::resize(const MultidimArray&, bool) [with T = long int]’ 2026-02-10T22:19:47,297 490 | void resize(const MultidimArray &v, bool copy = true) 2026-02-10T22:19:47,298 | ^~~~~~ 2026-02-10T22:19:47,299 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.cpp:983:6: note: ‘void MultidimArray::resize(size_t, size_t, size_t, size_t, bool) [with T = long int; size_t = unsigned int]’ 2026-02-10T22:19:47,300 983 | void MultidimArray::resize(size_t Ndim, size_t Zdim, size_t Ydim, size_t Xdim, bool copy) 2026-02-10T22:19:47,301 | ^~~~~~~~~~~~~~~~ 2026-02-10T22:19:47,302 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:761:10: note: ‘void MultidimArrayBase::resize(size_t, size_t, size_t)’ 2026-02-10T22:19:47,304 761 | void resize(size_t Zdim, size_t Ydim, size_t Xdim) 2026-02-10T22:19:47,305 | ^~~~~~ 2026-02-10T22:19:47,306 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:773:10: note: ‘void MultidimArrayBase::resize(size_t, size_t)’ 2026-02-10T22:19:47,307 773 | void resize(size_t Ydim, size_t Xdim) 2026-02-10T22:19:47,308 | ^~~~~~ 2026-02-10T22:19:47,310 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:785:10: note: ‘void MultidimArrayBase::resize(size_t)’ 2026-02-10T22:19:47,311 785 | void resize(size_t Xdim) 2026-02-10T22:19:47,312 | ^~~~~~ 2026-02-10T22:19:47,315 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:793:10: note: ‘void MultidimArrayBase::resize(ArrayDim&, bool)’ 2026-02-10T22:19:47,316 793 | void resize(ArrayDim &adim, bool copy=true); 2026-02-10T22:19:47,318 | ^~~~~~ 2026-02-10T22:19:47,318 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.cpp:1156:15: error: template-id ‘resize<>’ for ‘void MultidimArray::resize(long unsigned int, long unsigned int, long unsigned int, long unsigned int, bool)’ does not match any template declaration 2026-02-10T22:19:47,319 1156 | template void MultidimArray::resize(unsigned long, unsigned long, unsigned long, unsigned long, bool); 2026-02-10T22:19:47,320 | ^~~~~~~~~~~~~~~~~~ 2026-02-10T22:19:47,321 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.h:490:10: note: candidates are: ‘template void MultidimArray::resize(const MultidimArray&, bool) [with T = int]’ 2026-02-10T22:19:47,322 490 | void resize(const MultidimArray &v, bool copy = true) 2026-02-10T22:19:47,324 | ^~~~~~ 2026-02-10T22:19:47,325 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.h:475:10: note: ‘void MultidimArray::resize(size_t, size_t, size_t, size_t, bool) [with T = int; size_t = unsigned int]’ 2026-02-10T22:19:47,326 475 | void resize(size_t Ndim, size_t Zdim, size_t Ydim, size_t Xdim, bool copy=true); 2026-02-10T22:19:47,327 | ^~~~~~ 2026-02-10T22:19:47,328 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:761:10: note: ‘void MultidimArrayBase::resize(size_t, size_t, size_t)’ 2026-02-10T22:19:47,329 761 | void resize(size_t Zdim, size_t Ydim, size_t Xdim) 2026-02-10T22:19:47,330 | ^~~~~~ 2026-02-10T22:19:47,331 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:773:10: note: ‘void MultidimArrayBase::resize(size_t, size_t)’ 2026-02-10T22:19:47,331 773 | void resize(size_t Ydim, size_t Xdim) 2026-02-10T22:19:47,332 | ^~~~~~ 2026-02-10T22:19:47,333 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:785:10: note: ‘void MultidimArrayBase::resize(size_t)’ 2026-02-10T22:19:47,335 785 | void resize(size_t Xdim) 2026-02-10T22:19:47,342 | ^~~~~~ 2026-02-10T22:19:47,344 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:793:10: note: ‘void MultidimArrayBase::resize(ArrayDim&, bool)’ 2026-02-10T22:19:47,345 793 | void resize(ArrayDim &adim, bool copy=true); 2026-02-10T22:19:47,347 | ^~~~~~ 2026-02-10T22:19:47,348 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.cpp:1157:15: error: template-id ‘resize<>’ for ‘void MultidimArray::resize(long unsigned int, long unsigned int, long unsigned int, long unsigned int, bool)’ does not match any template declaration 2026-02-10T22:19:47,349 1157 | template void MultidimArray::resize(unsigned long, unsigned long, unsigned long, unsigned long, bool); 2026-02-10T22:19:47,350 | ^~~~~~~~~~~~~~~~~~~~ 2026-02-10T22:19:47,351 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.h:490:10: note: candidates are: ‘template void MultidimArray::resize(const MultidimArray&, bool) [with T = short int]’ 2026-02-10T22:19:47,352 490 | void resize(const MultidimArray &v, bool copy = true) 2026-02-10T22:19:47,354 | ^~~~~~ 2026-02-10T22:19:47,356 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.cpp:983:6: note: ‘void MultidimArray::resize(size_t, size_t, size_t, size_t, bool) [with T = short int; size_t = unsigned int]’ 2026-02-10T22:19:47,357 983 | void MultidimArray::resize(size_t Ndim, size_t Zdim, size_t Ydim, size_t Xdim, bool copy) 2026-02-10T22:19:47,359 | ^~~~~~~~~~~~~~~~ 2026-02-10T22:19:47,360 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:761:10: note: ‘void MultidimArrayBase::resize(size_t, size_t, size_t)’ 2026-02-10T22:19:47,362 761 | void resize(size_t Zdim, size_t Ydim, size_t Xdim) 2026-02-10T22:19:47,364 | ^~~~~~ 2026-02-10T22:19:47,365 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:773:10: note: ‘void MultidimArrayBase::resize(size_t, size_t)’ 2026-02-10T22:19:47,376 773 | void resize(size_t Ydim, size_t Xdim) 2026-02-10T22:19:47,377 | ^~~~~~ 2026-02-10T22:19:47,379 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:785:10: note: ‘void MultidimArrayBase::resize(size_t)’ 2026-02-10T22:19:47,380 785 | void resize(size_t Xdim) 2026-02-10T22:19:47,381 | ^~~~~~ 2026-02-10T22:19:47,383 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:793:10: note: ‘void MultidimArrayBase::resize(ArrayDim&, bool)’ 2026-02-10T22:19:47,384 793 | void resize(ArrayDim &adim, bool copy=true); 2026-02-10T22:19:47,386 | ^~~~~~ 2026-02-10T22:19:47,386 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.cpp:1158:15: error: template-id ‘resize<>’ for ‘void MultidimArray::resize(long unsigned int, long unsigned int, long unsigned int, long unsigned int, bool)’ does not match any template declaration 2026-02-10T22:19:47,388 1158 | template void MultidimArray::resize(unsigned long, unsigned long, unsigned long, unsigned long, bool); 2026-02-10T22:19:47,389 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-10T22:19:47,390 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.h:490:10: note: candidates are: ‘template void MultidimArray::resize(const MultidimArray&, bool) [with T = unsigned char]’ 2026-02-10T22:19:47,391 490 | void resize(const MultidimArray &v, bool copy = true) 2026-02-10T22:19:47,392 | ^~~~~~ 2026-02-10T22:19:47,393 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.cpp:983:6: note: ‘void MultidimArray::resize(size_t, size_t, size_t, size_t, bool) [with T = unsigned char; size_t = unsigned int]’ 2026-02-10T22:19:47,394 983 | void MultidimArray::resize(size_t Ndim, size_t Zdim, size_t Ydim, size_t Xdim, bool copy) 2026-02-10T22:19:47,395 | ^~~~~~~~~~~~~~~~ 2026-02-10T22:19:47,397 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:761:10: note: ‘void MultidimArrayBase::resize(size_t, size_t, size_t)’ 2026-02-10T22:19:47,398 761 | void resize(size_t Zdim, size_t Ydim, size_t Xdim) 2026-02-10T22:19:47,399 | ^~~~~~ 2026-02-10T22:19:47,400 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:773:10: note: ‘void MultidimArrayBase::resize(size_t, size_t)’ 2026-02-10T22:19:47,401 773 | void resize(size_t Ydim, size_t Xdim) 2026-02-10T22:19:47,402 | ^~~~~~ 2026-02-10T22:19:47,403 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:785:10: note: ‘void MultidimArrayBase::resize(size_t)’ 2026-02-10T22:19:47,404 785 | void resize(size_t Xdim) 2026-02-10T22:19:47,406 | ^~~~~~ 2026-02-10T22:19:47,407 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:793:10: note: ‘void MultidimArrayBase::resize(ArrayDim&, bool)’ 2026-02-10T22:19:47,408 793 | void resize(ArrayDim &adim, bool copy=true); 2026-02-10T22:19:47,410 | ^~~~~~ 2026-02-10T22:19:47,411 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.cpp:1159:15: error: template-id ‘resize<>’ for ‘void MultidimArray::resize(long unsigned int, long unsigned int, long unsigned int, long unsigned int, bool)’ does not match any template declaration 2026-02-10T22:19:47,413 1159 | template void MultidimArray::resize(unsigned long, unsigned long, unsigned long, unsigned long, bool); 2026-02-10T22:19:47,414 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-10T22:19:47,416 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.h:490:10: note: candidates are: ‘template void MultidimArray::resize(const MultidimArray&, bool) [with T = unsigned int]’ 2026-02-10T22:19:47,425 490 | void resize(const MultidimArray &v, bool copy = true) 2026-02-10T22:19:47,427 | ^~~~~~ 2026-02-10T22:19:47,428 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.cpp:983:6: note: ‘void MultidimArray::resize(size_t, size_t, size_t, size_t, bool) [with T = unsigned int; size_t = unsigned int]’ 2026-02-10T22:19:47,429 983 | void MultidimArray::resize(size_t Ndim, size_t Zdim, size_t Ydim, size_t Xdim, bool copy) 2026-02-10T22:19:47,431 | ^~~~~~~~~~~~~~~~ 2026-02-10T22:19:47,432 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:761:10: note: ‘void MultidimArrayBase::resize(size_t, size_t, size_t)’ 2026-02-10T22:19:47,433 761 | void resize(size_t Zdim, size_t Ydim, size_t Xdim) 2026-02-10T22:19:47,434 | ^~~~~~ 2026-02-10T22:19:47,435 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:773:10: note: ‘void MultidimArrayBase::resize(size_t, size_t)’ 2026-02-10T22:19:47,436 773 | void resize(size_t Ydim, size_t Xdim) 2026-02-10T22:19:47,437 | ^~~~~~ 2026-02-10T22:19:47,438 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:785:10: note: ‘void MultidimArrayBase::resize(size_t)’ 2026-02-10T22:19:47,439 785 | void resize(size_t Xdim) 2026-02-10T22:19:47,440 | ^~~~~~ 2026-02-10T22:19:47,441 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:793:10: note: ‘void MultidimArrayBase::resize(ArrayDim&, bool)’ 2026-02-10T22:19:47,442 793 | void resize(ArrayDim &adim, bool copy=true); 2026-02-10T22:19:47,443 | ^~~~~~ 2026-02-10T22:19:47,444 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.cpp:1160:15: error: template-id ‘resize<>’ for ‘void MultidimArray::resize(long unsigned int, long unsigned int, long unsigned int, long unsigned int, bool)’ does not match any template declaration 2026-02-10T22:19:47,445 1160 | template void MultidimArray::resize(unsigned long, unsigned long, unsigned long, unsigned long, bool); 2026-02-10T22:19:47,447 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-10T22:19:47,448 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.h:490:10: note: candidates are: ‘template void MultidimArray::resize(const MultidimArray&, bool) [with T = long unsigned int]’ 2026-02-10T22:19:47,449 490 | void resize(const MultidimArray &v, bool copy = true) 2026-02-10T22:19:47,450 | ^~~~~~ 2026-02-10T22:19:47,451 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.cpp:983:6: note: ‘void MultidimArray::resize(size_t, size_t, size_t, size_t, bool) [with T = long unsigned int; size_t = unsigned int]’ 2026-02-10T22:19:47,453 983 | void MultidimArray::resize(size_t Ndim, size_t Zdim, size_t Ydim, size_t Xdim, bool copy) 2026-02-10T22:19:47,454 | ^~~~~~~~~~~~~~~~ 2026-02-10T22:19:47,455 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:761:10: note: ‘void MultidimArrayBase::resize(size_t, size_t, size_t)’ 2026-02-10T22:19:47,457 761 | void resize(size_t Zdim, size_t Ydim, size_t Xdim) 2026-02-10T22:19:47,458 | ^~~~~~ 2026-02-10T22:19:47,460 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:773:10: note: ‘void MultidimArrayBase::resize(size_t, size_t)’ 2026-02-10T22:19:47,461 773 | void resize(size_t Ydim, size_t Xdim) 2026-02-10T22:19:47,462 | ^~~~~~ 2026-02-10T22:19:47,463 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:785:10: note: ‘void MultidimArrayBase::resize(size_t)’ 2026-02-10T22:19:47,465 785 | void resize(size_t Xdim) 2026-02-10T22:19:47,475 | ^~~~~~ 2026-02-10T22:19:47,477 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:793:10: note: ‘void MultidimArrayBase::resize(ArrayDim&, bool)’ 2026-02-10T22:19:47,478 793 | void resize(ArrayDim &adim, bool copy=true); 2026-02-10T22:19:47,478 | ^~~~~~ 2026-02-10T22:19:47,479 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.cpp:1161:15: error: template-id ‘resize<>’ for ‘void MultidimArray::resize(long unsigned int, long unsigned int, long unsigned int, long unsigned int, bool)’ does not match any template declaration 2026-02-10T22:19:47,480 1161 | template void MultidimArray::resize(unsigned long, unsigned long, unsigned long, unsigned long, bool); 2026-02-10T22:19:47,481 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-10T22:19:47,482 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.h:490:10: note: candidates are: ‘template void MultidimArray::resize(const MultidimArray&, bool) [with T = short unsigned int]’ 2026-02-10T22:19:47,483 490 | void resize(const MultidimArray &v, bool copy = true) 2026-02-10T22:19:47,484 | ^~~~~~ 2026-02-10T22:19:47,484 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.cpp:983:6: note: ‘void MultidimArray::resize(size_t, size_t, size_t, size_t, bool) [with T = short unsigned int; size_t = unsigned int]’ 2026-02-10T22:19:47,486 983 | void MultidimArray::resize(size_t Ndim, size_t Zdim, size_t Ydim, size_t Xdim, bool copy) 2026-02-10T22:19:47,487 | ^~~~~~~~~~~~~~~~ 2026-02-10T22:19:47,488 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:761:10: note: ‘void MultidimArrayBase::resize(size_t, size_t, size_t)’ 2026-02-10T22:19:47,489 761 | void resize(size_t Zdim, size_t Ydim, size_t Xdim) 2026-02-10T22:19:47,490 | ^~~~~~ 2026-02-10T22:19:47,491 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:773:10: note: ‘void MultidimArrayBase::resize(size_t, size_t)’ 2026-02-10T22:19:47,493 773 | void resize(size_t Ydim, size_t Xdim) 2026-02-10T22:19:47,494 | ^~~~~~ 2026-02-10T22:19:47,495 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:785:10: note: ‘void MultidimArrayBase::resize(size_t)’ 2026-02-10T22:19:47,497 785 | void resize(size_t Xdim) 2026-02-10T22:19:47,498 | ^~~~~~ 2026-02-10T22:19:47,499 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:793:10: note: ‘void MultidimArrayBase::resize(ArrayDim&, bool)’ 2026-02-10T22:19:47,500 793 | void resize(ArrayDim &adim, bool copy=true); 2026-02-10T22:19:47,501 | ^~~~~~ 2026-02-10T22:19:47,502 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.cpp:1162:15: error: template-id ‘resize<>’ for ‘void MultidimArray >::resize(long unsigned int, long unsigned int, long unsigned int, long unsigned int, bool)’ does not match any template declaration 2026-02-10T22:19:47,504 1162 | template void MultidimArray>::resize(unsigned long, unsigned long, unsigned long, unsigned long, bool); 2026-02-10T22:19:47,505 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-10T22:19:47,506 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.h:490:10: note: candidates are: ‘template void MultidimArray::resize(const MultidimArray&, bool) [with T = std::complex]’ 2026-02-10T22:19:47,507 490 | void resize(const MultidimArray &v, bool copy = true) 2026-02-10T22:19:47,508 | ^~~~~~ 2026-02-10T22:19:47,509 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.h:475:10: note: ‘void MultidimArray::resize(size_t, size_t, size_t, size_t, bool) [with T = std::complex; size_t = unsigned int]’ 2026-02-10T22:19:47,510 475 | void resize(size_t Ndim, size_t Zdim, size_t Ydim, size_t Xdim, bool copy=true); 2026-02-10T22:19:47,511 | ^~~~~~ 2026-02-10T22:19:47,512 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:761:10: note: ‘void MultidimArrayBase::resize(size_t, size_t, size_t)’ 2026-02-10T22:19:47,516 761 | void resize(size_t Zdim, size_t Ydim, size_t Xdim) 2026-02-10T22:19:47,517 | ^~~~~~ 2026-02-10T22:19:47,518 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:773:10: note: ‘void MultidimArrayBase::resize(size_t, size_t)’ 2026-02-10T22:19:47,519 773 | void resize(size_t Ydim, size_t Xdim) 2026-02-10T22:19:47,520 | ^~~~~~ 2026-02-10T22:19:47,521 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:785:10: note: ‘void MultidimArrayBase::resize(size_t)’ 2026-02-10T22:19:47,522 785 | void resize(size_t Xdim) 2026-02-10T22:19:47,523 | ^~~~~~ 2026-02-10T22:19:47,524 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:793:10: note: ‘void MultidimArrayBase::resize(ArrayDim&, bool)’ 2026-02-10T22:19:47,525 793 | void resize(ArrayDim &adim, bool copy=true); 2026-02-10T22:19:47,528 | ^~~~~~ 2026-02-10T22:19:47,529 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.cpp:1163:15: error: template-id ‘resize<>’ for ‘void MultidimArray::resize(long unsigned int, long unsigned int, long unsigned int, long unsigned int, bool)’ does not match any template declaration 2026-02-10T22:19:47,530 1163 | template void MultidimArray::resize(unsigned long, unsigned long, unsigned long, unsigned long, bool); 2026-02-10T22:19:47,531 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-10T22:19:47,532 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.h:490:10: note: candidates are: ‘template void MultidimArray::resize(const MultidimArray&, bool) [with T = half_float::half]’ 2026-02-10T22:19:47,534 490 | void resize(const MultidimArray &v, bool copy = true) 2026-02-10T22:19:47,535 | ^~~~~~ 2026-02-10T22:19:47,536 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array.cpp:983:6: note: ‘void MultidimArray::resize(size_t, size_t, size_t, size_t, bool) [with T = half_float::half; size_t = unsigned int]’ 2026-02-10T22:19:47,538 983 | void MultidimArray::resize(size_t Ndim, size_t Zdim, size_t Ydim, size_t Xdim, bool copy) 2026-02-10T22:19:47,546 | ^~~~~~~~~~~~~~~~ 2026-02-10T22:19:47,547 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:761:10: note: ‘void MultidimArrayBase::resize(size_t, size_t, size_t)’ 2026-02-10T22:19:47,548 761 | void resize(size_t Zdim, size_t Ydim, size_t Xdim) 2026-02-10T22:19:47,549 | ^~~~~~ 2026-02-10T22:19:47,551 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:773:10: note: ‘void MultidimArrayBase::resize(size_t, size_t)’ 2026-02-10T22:19:47,552 773 | void resize(size_t Ydim, size_t Xdim) 2026-02-10T22:19:47,553 | ^~~~~~ 2026-02-10T22:19:47,554 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:785:10: note: ‘void MultidimArrayBase::resize(size_t)’ 2026-02-10T22:19:47,555 785 | void resize(size_t Xdim) 2026-02-10T22:19:47,556 | ^~~~~~ 2026-02-10T22:19:47,557 /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/multidim_array_base.h:793:10: note: ‘void MultidimArrayBase::resize(ArrayDim&, bool)’ 2026-02-10T22:19:47,558 793 | void resize(ArrayDim &adim, bool copy=true); 2026-02-10T22:19:47,559 | ^~~~~~ 2026-02-10T22:19:50,071 [212/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/multidim_array_base.cpp.o 2026-02-10T22:20:01,138 [213/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/multidim_array_generic.cpp.o 2026-02-10T22:20:02,448 [214/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/metadata_sql.cpp.o 2026-02-10T22:20:02,449 In file included from /usr/include/c++/12/vector:70, 2026-02-10T22:20:02,449 from /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/xmipp_strings.h:29, 2026-02-10T22:20:02,450 from /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/metadata_sql.h:31, 2026-02-10T22:20:02,451 from /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/metadata_sql.cpp:29: 2026-02-10T22:20:02,451 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const MDLabel&}; _Tp = MDObject; _Alloc = std::allocator]’: 2026-02-10T22:20:02,452 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2026-02-10T22:20:02,453 439 | vector<_Tp, _Alloc>:: 2026-02-10T22:20:02,454 | ^~~~~~~~~~~~~~~~~~~ 2026-02-10T22:20:02,455 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {const MDLabel&}; _Tp = MDObject; _Alloc = std::allocator]’, 2026-02-10T22:20:02,456 inlined from ‘bool MDSql::getObjectsValues(const std::vector&, std::vector&)’ at /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/metadata_sql.cpp:524:36: 2026-02-10T22:20:02,457 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-02-10T22:20:02,458 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-02-10T22:20:02,459 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-10T22:20:05,777 [215/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/metadata_vec.cpp.o 2026-02-10T22:20:05,778 In file included from /usr/include/c++/12/vector:70, 2026-02-10T22:20:05,779 from /usr/include/c++/12/bits/random.h:34, 2026-02-10T22:20:05,780 from /usr/include/c++/12/random:49, 2026-02-10T22:20:05,781 from /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/metadata_vec.cpp:30: 2026-02-10T22:20:05,782 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const MDObject&}; _Tp = MDObject; _Alloc = std::allocator]’: 2026-02-10T22:20:05,783 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2026-02-10T22:20:05,784 439 | vector<_Tp, _Alloc>:: 2026-02-10T22:20:05,785 | ^~~~~~~~~~~~~~~~~~~ 2026-02-10T22:20:05,786 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {const MDObject&}; _Tp = MDObject; _Alloc = std::allocator]’, 2026-02-10T22:20:05,787 inlined from ‘virtual void MetaDataVec::getColumnValues(MDLabel, std::vector&) const’ at /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/metadata_vec.cpp:368:31: 2026-02-10T22:20:05,788 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-02-10T22:20:05,789 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-02-10T22:20:05,790 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-10T22:20:05,790 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {MDObject}; _Tp = MDObject; _Alloc = std::allocator]’: 2026-02-10T22:20:05,791 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2026-02-10T22:20:05,792 439 | vector<_Tp, _Alloc>:: 2026-02-10T22:20:05,793 | ^~~~~~~~~~~~~~~~~~~ 2026-02-10T22:20:05,793 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {MDObject}; _Tp = MDObject; _Alloc = std::allocator]’, 2026-02-10T22:20:05,794 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = MDObject; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2026-02-10T22:20:05,795 inlined from ‘void MetaDataVec::_setRow(const MDRow&, size_t)’ at /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/metadata_vec.cpp:214:26: 2026-02-10T22:20:05,795 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-02-10T22:20:05,796 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-02-10T22:20:05,797 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-10T22:20:05,798 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {MDObject}; _Tp = MDObject; _Alloc = std::allocator]’, 2026-02-10T22:20:05,799 inlined from ‘void MetaDataVec::_expand(MetaDataVecRow&, size_t)’ at /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10/src/core/metadata_vec.cpp:888:25: 2026-02-10T22:20:05,799 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-02-10T22:20:05,800 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-02-10T22:20:05,801 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-10T22:20:09,695 [216/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/metadata_static.cpp.o 2026-02-10T22:20:09,696 ninja: build stopped: subcommand failed. 2026-02-10T22:20:14,758 *** CMake build failed 2026-02-10T22:20:14,884 ERROR: [present-rich] Building wheel for pyxmipp3 (pyproject.toml) exited with 1 2026-02-10T22:20:14,898 [bold magenta]full command[/]: [blue]/usr/bin/python3 /usr/lib/python3/dist-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py build_wheel /tmp/tmpicosytts[/] 2026-02-10T22:20:14,899 [bold magenta]cwd[/]: /tmp/pip-wheel-1sueagoh/pyxmipp3_e193a09cba5445808a873b29607aea10 2026-02-10T22:20:14,900 Building wheel for pyxmipp3 (pyproject.toml): finished with status 'error' 2026-02-10T22:20:14,904 ERROR: Failed building wheel for pyxmipp3 2026-02-10T22:20:14,908 Failed to build pyxmipp3 2026-02-10T22:20:14,910 ERROR: Failed to build one or more wheels 2026-02-10T22:20:14,911 Exception information: 2026-02-10T22:20:14,911 Traceback (most recent call last): 2026-02-10T22:20:14,911 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 160, in exc_logging_wrapper 2026-02-10T22:20:14,911 status = run_func(*args) 2026-02-10T22:20:14,911 ^^^^^^^^^^^^^^^ 2026-02-10T22:20:14,911 File "/usr/lib/python3/dist-packages/pip/_internal/cli/req_command.py", line 247, in wrapper 2026-02-10T22:20:14,911 return func(self, options, args) 2026-02-10T22:20:14,911 ^^^^^^^^^^^^^^^^^^^^^^^^^ 2026-02-10T22:20:14,911 File "/usr/lib/python3/dist-packages/pip/_internal/commands/wheel.py", line 201, in run 2026-02-10T22:20:14,911 raise CommandError("Failed to build one or more wheels") 2026-02-10T22:20:14,911 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2026-02-10T22:20:14,920 Removed build tracker: '/tmp/pip-build-tracker-hmxw28wb'