2026-02-10T22:23:49,593 Created temporary directory: /tmp/pip-ephem-wheel-cache-0kyixsnz
2026-02-10T22:23:49,595 Created temporary directory: /tmp/pip-build-tracker-ha13c2kp
2026-02-10T22:23:49,596 Initialized build tracking at /tmp/pip-build-tracker-ha13c2kp
2026-02-10T22:23:49,597 Created build tracker: /tmp/pip-build-tracker-ha13c2kp
2026-02-10T22:23:49,597 Entered build tracker: /tmp/pip-build-tracker-ha13c2kp
2026-02-10T22:23:49,598 Created temporary directory: /tmp/pip-wheel-0y_wa6d0
2026-02-10T22:23:49,601 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-02-10T22:23:49,603 Created temporary directory: /tmp/pip-ephem-wheel-cache-i9e91n5v
2026-02-10T22:23:49,625 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-02-10T22:23:49,629 2 location(s) to search for versions of scipion-em-tomo:
2026-02-10T22:23:49,629 * https://pypi.org/simple/scipion-em-tomo/
2026-02-10T22:23:49,629 * https://www.piwheels.org/simple/scipion-em-tomo/
2026-02-10T22:23:49,630 Fetching project page and analyzing links: https://pypi.org/simple/scipion-em-tomo/
2026-02-10T22:23:49,630 Getting page https://pypi.org/simple/scipion-em-tomo/
2026-02-10T22:23:49,632 Found index url https://pypi.org/simple
2026-02-10T22:23:49,849 Fetched page https://pypi.org/simple/scipion-em-tomo/ as application/vnd.pypi.simple.v1+json
2026-02-10T22:23:49,864   Found link https://files.pythonhosted.org/packages/4b/4c/5b70aecaa1ac9210c87ace96840ea974ccd610a88008cb14ad1274ccb307/scipion-em-tomo-0.0.1.tar.gz (from https://pypi.org/simple/scipion-em-tomo/), version: 0.0.1
2026-02-10T22:23:49,865   Found link https://files.pythonhosted.org/packages/64/5d/767f112679414c6fc0068867f3a600f2e1d2be0b39b70902d21ae0d8b6bb/scipion-em-tomo-3.0.0.tar.gz (from https://pypi.org/simple/scipion-em-tomo/), version: 3.0.0
2026-02-10T22:23:49,866   Found link https://files.pythonhosted.org/packages/89/b7/09e587c8eebf58e9d466cd4f03dc25961c43aec8cb28a16b905b9a184dbe/scipion-em-tomo-3.0.2.tar.gz (from https://pypi.org/simple/scipion-em-tomo/), version: 3.0.2
2026-02-10T22:23:49,867   Found link https://files.pythonhosted.org/packages/ee/b3/696e070fef608e88eac8cbfbb6751cc4a6ffb6b0da0f7ab95d5c8bac77eb/scipion-em-tomo-3.0.4.tar.gz (from https://pypi.org/simple/scipion-em-tomo/), version: 3.0.4
2026-02-10T22:23:49,867   Skipping link: No binaries permitted for scipion-em-tomo: https://files.pythonhosted.org/packages/c9/6a/d73fa696ec196b9920750e18e346f24f251d5563427b335dde8418050d60/scipion_em_tomo-3.0.4-py3-none-any.whl (from https://pypi.org/simple/scipion-em-tomo/)
2026-02-10T22:23:49,868   Found link https://files.pythonhosted.org/packages/1e/79/1fe5055e381bc7efc7a2326c4fb955d3bfad453b43f65a3e4c321aaacade/scipion-em-tomo-3.0.5.tar.gz (from https://pypi.org/simple/scipion-em-tomo/), version: 3.0.5
2026-02-10T22:23:49,869   Skipping link: No binaries permitted for scipion-em-tomo: https://files.pythonhosted.org/packages/f1/07/cd52d74299dbbc1f12a5c91a690482728f8df411325608f9d496ddaa2873/scipion_em_tomo-3.0.5-py3-none-any.whl (from https://pypi.org/simple/scipion-em-tomo/)
2026-02-10T22:23:49,869   Found link https://files.pythonhosted.org/packages/7d/7e/82239c4147b00b92b5d8569e693c1b65319faebe69724d9d42c3e2d1d02b/scipion-em-tomo-3.0.6.tar.gz (from https://pypi.org/simple/scipion-em-tomo/), version: 3.0.6
2026-02-10T22:23:49,870   Skipping link: No binaries permitted for scipion-em-tomo: https://files.pythonhosted.org/packages/c1/2c/2b352785ef9211e1666d3849e35b1705b4a7a3f0c22a7881b65c8bc8aef0/scipion_em_tomo-3.0.6-py3-none-any.whl (from https://pypi.org/simple/scipion-em-tomo/)
2026-02-10T22:23:49,871   Found link https://files.pythonhosted.org/packages/48/1b/218c21edfe5a3e136b5cb310cb2a79795c0d9e282cff00262057a7595d5a/scipion-em-tomo-3.0.7.tar.gz (from https://pypi.org/simple/scipion-em-tomo/), version: 3.0.7
2026-02-10T22:23:49,872   Skipping link: No binaries permitted for scipion-em-tomo: https://files.pythonhosted.org/packages/71/b0/fd5ce9ecbf5006136e2af54c1174acefe8496140a5665e270e8e68f34748/scipion_em_tomo-3.0.7-py3-none-any.whl (from https://pypi.org/simple/scipion-em-tomo/)
2026-02-10T22:23:49,872   Found link https://files.pythonhosted.org/packages/09/7f/12c990023ae8f1514968476800cf90017bb578f5747fd1d2a64e133b7e27/scipion-em-tomo-3.0.8.tar.gz (from https://pypi.org/simple/scipion-em-tomo/), version: 3.0.8
2026-02-10T22:23:49,873   Skipping link: No binaries permitted for scipion-em-tomo: https://files.pythonhosted.org/packages/d9/64/6b4b1293fe099422194d59ccf5a12375e481030341e8ddbdb198b8247d04/scipion_em_tomo-3.0.8-py3-none-any.whl (from https://pypi.org/simple/scipion-em-tomo/)
2026-02-10T22:23:49,874   Found link https://files.pythonhosted.org/packages/68/74/7bdf7f0557e323371550c0a64e241512ecc24784abcf9e75338e4fbf94a5/scipion-em-tomo-3.0.9.tar.gz (from https://pypi.org/simple/scipion-em-tomo/), version: 3.0.9
2026-02-10T22:23:49,874   Skipping link: No binaries permitted for scipion-em-tomo: https://files.pythonhosted.org/packages/05/92/cd9a65cca32fdaf357d074ce1d2f51858fe2378a6e8b72539d26561418e3/scipion_em_tomo-3.0.9-py3-none-any.whl (from https://pypi.org/simple/scipion-em-tomo/)
2026-02-10T22:23:49,875   Found link https://files.pythonhosted.org/packages/0b/fd/509e9148c9f6b8eb192a3aa201f4728b9233655b0f4a90183228b0037f77/scipion-em-tomo-3.0.10.tar.gz (from https://pypi.org/simple/scipion-em-tomo/), version: 3.0.10
2026-02-10T22:23:49,875   Skipping link: No binaries permitted for scipion-em-tomo: https://files.pythonhosted.org/packages/d6/c1/ddb298fc9b11aa8206e120231583efa6d9f2bfc02c925f9a316b093f49fa/scipion_em_tomo-3.0.10-py3-none-any.whl (from https://pypi.org/simple/scipion-em-tomo/)
2026-02-10T22:23:49,876   Found link https://files.pythonhosted.org/packages/dc/7f/834745f70596330af5c0af882ce5aea8074e288b96d0e5c12eb0bc4d0c1e/scipion-em-tomo-3.0.11.tar.gz (from https://pypi.org/simple/scipion-em-tomo/), version: 3.0.11
2026-02-10T22:23:49,877   Skipping link: No binaries permitted for scipion-em-tomo: https://files.pythonhosted.org/packages/a8/9d/95d4f3fc3c8e1d72ce99a4cc25646174a3751cae7c08cf7984ea1a111e79/scipion_em_tomo-3.0.11-py3-none-any.whl (from https://pypi.org/simple/scipion-em-tomo/)
2026-02-10T22:23:49,877   Found link https://files.pythonhosted.org/packages/a2/8c/13644e0a04b94ba99ffdf7d61687bf2b76b4424efd431f8105d9849f4fe1/scipion-em-tomo-3.0.12.tar.gz (from https://pypi.org/simple/scipion-em-tomo/), version: 3.0.12
2026-02-10T22:23:49,878   Skipping link: No binaries permitted for scipion-em-tomo: https://files.pythonhosted.org/packages/e1/07/de68c987adcde252d671bcb58462d31e0e070b46fa6d46f0246dcfe406ff/scipion_em_tomo-3.0.12-py3-none-any.whl (from https://pypi.org/simple/scipion-em-tomo/)
2026-02-10T22:23:49,878   Found link https://files.pythonhosted.org/packages/85/de/dbe234d7c7f4b000dc84755225b68c69d8860feab2d63be07716dfab290e/scipion-em-tomo-3.0.13.tar.gz (from https://pypi.org/simple/scipion-em-tomo/), version: 3.0.13
2026-02-10T22:23:49,879   Skipping link: No binaries permitted for scipion-em-tomo: https://files.pythonhosted.org/packages/6c/b6/00e9730d92c9ae305f7b94de91a2157f34fd2a1cf91b922277a4f56cf2ae/scipion_em_tomo-3.0.13-py3-none-any.whl (from https://pypi.org/simple/scipion-em-tomo/)
2026-02-10T22:23:49,880   Found link https://files.pythonhosted.org/packages/d3/82/9a509444c48d8f1696c0c8760e236d0a788ab8eff20af46bac3864724eef/scipion-em-tomo-3.0.14.tar.gz (from https://pypi.org/simple/scipion-em-tomo/), version: 3.0.14
2026-02-10T22:23:49,881   Skipping link: No binaries permitted for scipion-em-tomo: https://files.pythonhosted.org/packages/a4/ee/d9bd2c12c01b1b21dc05657d9c193e13a546048aab39056150a7132d5ec4/scipion_em_tomo-3.0.14-py3-none-any.whl (from https://pypi.org/simple/scipion-em-tomo/)
2026-02-10T22:23:49,881   Found link https://files.pythonhosted.org/packages/3b/2a/11bdfc8ac9198b2f13fae692999cef17a9d43ebafb628ed811e0ff6e61ae/scipion-em-tomo-3.0.15.tar.gz (from https://pypi.org/simple/scipion-em-tomo/), version: 3.0.15
2026-02-10T22:23:49,882   Skipping link: No binaries permitted for scipion-em-tomo: https://files.pythonhosted.org/packages/7d/84/b48cbf33ca559ec97210f164bedcb4e88fba1a6bed30049ff27f8dfb1c77/scipion_em_tomo-3.0.15-py3-none-any.whl (from https://pypi.org/simple/scipion-em-tomo/)
2026-02-10T22:23:49,883   Found link https://files.pythonhosted.org/packages/52/2d/402e7f7e52cb4fd2d104308ecc058d05c10c96e2115c5b2d84a9df5efb3f/scipion-em-tomo-3.1.0.tar.gz (from https://pypi.org/simple/scipion-em-tomo/), version: 3.1.0
2026-02-10T22:23:49,884   Skipping link: No binaries permitted for scipion-em-tomo: https://files.pythonhosted.org/packages/6e/0d/928f81e2a365e5a359c03eeed1c6fac1df920aa91de65f87b54d56301780/scipion_em_tomo-3.1.0-py3-none-any.whl (from https://pypi.org/simple/scipion-em-tomo/)
2026-02-10T22:23:49,884   Found link https://files.pythonhosted.org/packages/ed/62/12eeec013e35d9cb4b60162edafdbab91aab497aa1a99ed1d0dbb22c7d86/scipion-em-tomo-3.1.1.tar.gz (from https://pypi.org/simple/scipion-em-tomo/), version: 3.1.1
2026-02-10T22:23:49,885   Skipping link: No binaries permitted for scipion-em-tomo: https://files.pythonhosted.org/packages/c0/ec/7fe29c40cc3dba11359fff2b78d8608c88984da2364ce2e35831105023c9/scipion_em_tomo-3.1.1-py3-none-any.whl (from https://pypi.org/simple/scipion-em-tomo/)
2026-02-10T22:23:49,886   Found link https://files.pythonhosted.org/packages/b8/d2/40f08695253523e3c5bdba6696f5d624b9bcc7f4ad634564c8981dd66fd4/scipion-em-tomo-3.1.2.tar.gz (from https://pypi.org/simple/scipion-em-tomo/), version: 3.1.2
2026-02-10T22:23:49,886   Skipping link: No binaries permitted for scipion-em-tomo: https://files.pythonhosted.org/packages/0e/7d/2bbc9681e4e8a611697b4ebcca09c252d5271de849b36929199f428690ef/scipion_em_tomo-3.1.2-py3-none-any.whl (from https://pypi.org/simple/scipion-em-tomo/)
2026-02-10T22:23:49,887   Found link https://files.pythonhosted.org/packages/89/c9/41a4d33c66adfd6a4a977542f149d2709f8b52656fd59478bd5c408ff8cd/scipion-em-tomo-3.1.3.tar.gz (from https://pypi.org/simple/scipion-em-tomo/), version: 3.1.3
2026-02-10T22:23:49,887   Skipping link: No binaries permitted for scipion-em-tomo: https://files.pythonhosted.org/packages/b7/a5/053968418f445baf5ba5e9154bb46a995acc919238bf44d1143f421020ee/scipion_em_tomo-3.1.3-py3-none-any.whl (from https://pypi.org/simple/scipion-em-tomo/)
2026-02-10T22:23:49,888   Found link https://files.pythonhosted.org/packages/22/d6/aa06a0d73aa4688cb4530fb3b78473d16af8e86d57c9b2fc731f192bdded/scipion-em-tomo-3.1.4.tar.gz (from https://pypi.org/simple/scipion-em-tomo/), version: 3.1.4
2026-02-10T22:23:49,889   Skipping link: No binaries permitted for scipion-em-tomo: https://files.pythonhosted.org/packages/67/12/385eb1c78f220e90d6bbab27d262283cb8face0e865c212291003662e2da/scipion_em_tomo-3.1.4-py3-none-any.whl (from https://pypi.org/simple/scipion-em-tomo/)
2026-02-10T22:23:49,890   Found link https://files.pythonhosted.org/packages/2b/d0/ff2c8658221f1f87df302baa72d614194552e6dc59e17c688de1185c6a34/scipion-em-tomo-3.1.5.tar.gz (from https://pypi.org/simple/scipion-em-tomo/), version: 3.1.5
2026-02-10T22:23:49,890   Skipping link: No binaries permitted for scipion-em-tomo: https://files.pythonhosted.org/packages/d6/20/49484a7eec2b228822e29a65e6625bd70471b506a8e9ad6c053b01ab0327/scipion_em_tomo-3.1.5-py3-none-any.whl (from https://pypi.org/simple/scipion-em-tomo/)
2026-02-10T22:23:49,891   Found link https://files.pythonhosted.org/packages/80/8f/8bfa3300950a13f7fffa00515f2d83d164cee07eef31e10b4e849388a2f1/scipion-em-tomo-3.1.6.tar.gz (from https://pypi.org/simple/scipion-em-tomo/), version: 3.1.6
2026-02-10T22:23:49,892   Skipping link: No binaries permitted for scipion-em-tomo: https://files.pythonhosted.org/packages/f3/e9/ffce27d9103b12544997e3c307018f040747368497043825f8f2f0f07421/scipion_em_tomo-3.1.6-py3-none-any.whl (from https://pypi.org/simple/scipion-em-tomo/)
2026-02-10T22:23:49,892   Found link https://files.pythonhosted.org/packages/e0/14/edac03039b27c59dbf29b6a7953cd2ec29f4e3ffa358f332f5d661340021/scipion-em-tomo-3.1.7.tar.gz (from https://pypi.org/simple/scipion-em-tomo/), version: 3.1.7
2026-02-10T22:23:49,893   Skipping link: No binaries permitted for scipion-em-tomo: https://files.pythonhosted.org/packages/4f/64/6da2171d34cccd06f45bb32c434fa0c8fb715c778049cda3ff4aa7b77955/scipion_em_tomo-3.1.7-py3-none-any.whl (from https://pypi.org/simple/scipion-em-tomo/)
2026-02-10T22:23:49,894   Found link https://files.pythonhosted.org/packages/8e/54/f7c0776e9516ae2c43bba075f25b62f44cd972286af90e15008778d5d07d/scipion-em-tomo-3.1.8.tar.gz (from https://pypi.org/simple/scipion-em-tomo/), version: 3.1.8
2026-02-10T22:23:49,895   Skipping link: No binaries permitted for scipion-em-tomo: https://files.pythonhosted.org/packages/cd/c3/1329006d7166c9f1d77e42336c867de3eabcf5b1482ca7049a7312925c18/scipion_em_tomo-3.1.8-py3-none-any.whl (from https://pypi.org/simple/scipion-em-tomo/)
2026-02-10T22:23:49,896   Found link https://files.pythonhosted.org/packages/49/e8/860425d7e3f49a135d088eef9fb53406cd6c6fed051c232b09de1b80fa66/scipion-em-tomo-3.1.9.tar.gz (from https://pypi.org/simple/scipion-em-tomo/), version: 3.1.9
2026-02-10T22:23:49,896   Skipping link: No binaries permitted for scipion-em-tomo: https://files.pythonhosted.org/packages/e0/8e/6510653355e001efa66380410c6a3557d65969f86dc084f275b92c0dbf24/scipion_em_tomo-3.1.9-py3-none-any.whl (from https://pypi.org/simple/scipion-em-tomo/)
2026-02-10T22:23:49,897   Found link https://files.pythonhosted.org/packages/41/da/dfdec0d60d53c086b01bb6c891fe5da550f1a11f63d9e2a9905f9ae6fba2/scipion-em-tomo-3.2.0.tar.gz (from https://pypi.org/simple/scipion-em-tomo/), version: 3.2.0
2026-02-10T22:23:49,897   Skipping link: No binaries permitted for scipion-em-tomo: https://files.pythonhosted.org/packages/c7/3a/e3cd1ce4d1b1077626fb6a05940160d9a1dd5482d90b95f9e1f1e803c926/scipion_em_tomo-3.2.0-py3-none-any.whl (from https://pypi.org/simple/scipion-em-tomo/)
2026-02-10T22:23:49,898   Found link https://files.pythonhosted.org/packages/88/ed/22560e0b3b77369c37d26db0efdeb61797421fe403459c5f8e1612a24113/scipion-em-tomo-3.3.0.tar.gz (from https://pypi.org/simple/scipion-em-tomo/), version: 3.3.0
2026-02-10T22:23:49,899   Skipping link: No binaries permitted for scipion-em-tomo: https://files.pythonhosted.org/packages/2b/27/d0b7770bc3717af55b5553072b556586257d8a8b2e03099ed87e4ca03e06/scipion_em_tomo-3.3.0-py3-none-any.whl (from https://pypi.org/simple/scipion-em-tomo/)
2026-02-10T22:23:49,899   Found link https://files.pythonhosted.org/packages/c5/31/5ab268c56fcfbf735dc7ac69aef960487609195939e4f1338c07f490041f/scipion-em-tomo-3.4.0.tar.gz (from https://pypi.org/simple/scipion-em-tomo/), version: 3.4.0
2026-02-10T22:23:49,900   Skipping link: No binaries permitted for scipion-em-tomo: https://files.pythonhosted.org/packages/35/9e/f0fb3cbf6bee02520c8da704fe01cf88e6c7cee2baf71a8604712836ced1/scipion_em_tomo-3.4.0-py3-none-any.whl (from https://pypi.org/simple/scipion-em-tomo/)
2026-02-10T22:23:49,901   Found link https://files.pythonhosted.org/packages/f4/64/1237aed2180c90ebde019c82517330131858da6af2210c5658d79f890f48/scipion-em-tomo-3.4.1.tar.gz (from https://pypi.org/simple/scipion-em-tomo/), version: 3.4.1
2026-02-10T22:23:49,902   Skipping link: No binaries permitted for scipion-em-tomo: https://files.pythonhosted.org/packages/cc/33/5fe83f86542f53108078d770956e8bda4608b5fd1a83c06707d46d19bdb8/scipion_em_tomo-3.4.1-py3-none-any.whl (from https://pypi.org/simple/scipion-em-tomo/)
2026-02-10T22:23:49,902   Found link https://files.pythonhosted.org/packages/51/99/5f5707ff74b0212081dac4438946d7df7d0244c49fc4e9ea52ffc1e0e11b/scipion-em-tomo-3.5.1.tar.gz (from https://pypi.org/simple/scipion-em-tomo/), version: 3.5.1
2026-02-10T22:23:49,903   Skipping link: No binaries permitted for scipion-em-tomo: https://files.pythonhosted.org/packages/13/7c/c45713ff8c39e0d4fa7fde9099d1410f2a3d61f55f1454f21df573159073/scipion_em_tomo-3.5.1-py3-none-any.whl (from https://pypi.org/simple/scipion-em-tomo/)
2026-02-10T22:23:49,904   Found link https://files.pythonhosted.org/packages/f2/58/26759f7b22a3c34a70b9a8c426f887793cf6f183d754a35e14d5dd8e9787/scipion-em-tomo-3.6.0.tar.gz (from https://pypi.org/simple/scipion-em-tomo/), version: 3.6.0
2026-02-10T22:23:49,904   Skipping link: No binaries permitted for scipion-em-tomo: https://files.pythonhosted.org/packages/cd/37/bf31b29151100ca6932509d51046481333b56fbf66a9fb6018f098076afd/scipion_em_tomo-3.6.0-py3-none-any.whl (from https://pypi.org/simple/scipion-em-tomo/)
2026-02-10T22:23:49,905   Found link https://files.pythonhosted.org/packages/11/39/e8be6a170fa04431a23d6b84a0b037240ec168925411e4e9cd1e6de35ea7/scipion-em-tomo-3.6.1.tar.gz (from https://pypi.org/simple/scipion-em-tomo/), version: 3.6.1
2026-02-10T22:23:49,906   Skipping link: No binaries permitted for scipion-em-tomo: https://files.pythonhosted.org/packages/ec/f7/fcc782cfa2b18512865b0fff79dfe869c01c7cf6510df0d507211460124e/scipion_em_tomo-3.6.1-py3-none-any.whl (from https://pypi.org/simple/scipion-em-tomo/)
2026-02-10T22:23:49,906   Found link https://files.pythonhosted.org/packages/aa/0c/b53570117a260035827387eab332e4d7aae0d781e4ff210baca3e21d3bd6/scipion-em-tomo-3.7.0.tar.gz (from https://pypi.org/simple/scipion-em-tomo/), version: 3.7.0
2026-02-10T22:23:49,907   Skipping link: No binaries permitted for scipion-em-tomo: https://files.pythonhosted.org/packages/5c/02/8ba7933cac14333d9df1cf13885f8893270644cd5bb35cb540f81cfe9a4b/scipion_em_tomo-3.7.0-py3-none-any.whl (from https://pypi.org/simple/scipion-em-tomo/)
2026-02-10T22:23:49,907   Found link https://files.pythonhosted.org/packages/04/da/f1e2b8393e8491ab100476dc15a0ab149dcadbc2809cc2b5b438bba26ba3/scipion-em-tomo-3.7.1.tar.gz (from https://pypi.org/simple/scipion-em-tomo/), version: 3.7.1
2026-02-10T22:23:49,908   Skipping link: No binaries permitted for scipion-em-tomo: https://files.pythonhosted.org/packages/30/6f/2e09235406700c76c732a554fea5a6f445f0762cdb9f331d8d3c67b021da/scipion_em_tomo-3.7.1-py3-none-any.whl (from https://pypi.org/simple/scipion-em-tomo/)
2026-02-10T22:23:49,908   Found link https://files.pythonhosted.org/packages/f2/27/a17a83a4c1f8b7cbe03e848bca784ef1baef29156774b85adb3318a6bc44/scipion-em-tomo-3.7.2.tar.gz (from https://pypi.org/simple/scipion-em-tomo/), version: 3.7.2
2026-02-10T22:23:49,909   Skipping link: No binaries permitted for scipion-em-tomo: https://files.pythonhosted.org/packages/58/13/443ef4613f73c64c381c9a08ff6a46d18b8c6bbe8a05c496256ba6f0d87d/scipion_em_tomo-3.7.2-py3-none-any.whl (from https://pypi.org/simple/scipion-em-tomo/)
2026-02-10T22:23:49,910   Found link https://files.pythonhosted.org/packages/29/6b/d47a5ab218722cde4dddc85a86ff78a335b17a38c1c8d668165d1d671e76/scipion-em-tomo-3.8.0.tar.gz (from https://pypi.org/simple/scipion-em-tomo/), version: 3.8.0
2026-02-10T22:23:49,910   Skipping link: No binaries permitted for scipion-em-tomo: https://files.pythonhosted.org/packages/c0/c1/d9af4a08dcbabd048927b989f54b8b0514b976982c67851a5edc3c4a6be0/scipion_em_tomo-3.8.0-py3-none-any.whl (from https://pypi.org/simple/scipion-em-tomo/)
2026-02-10T22:23:49,911   Found link https://files.pythonhosted.org/packages/5a/04/f2a09d3c4fb896ace07efc8cb1c8241de65a7c185b7aef37d9cdfe16c4a7/scipion-em-tomo-3.9.0.tar.gz (from https://pypi.org/simple/scipion-em-tomo/), version: 3.9.0
2026-02-10T22:23:49,912   Skipping link: No binaries permitted for scipion-em-tomo: https://files.pythonhosted.org/packages/95/84/288b3afdb371bfe4c3174a39b58c93afe0d45332659fc777496fddfd6741/scipion_em_tomo-3.9.0-py3-none-any.whl (from https://pypi.org/simple/scipion-em-tomo/)
2026-02-10T22:23:49,912   Found link https://files.pythonhosted.org/packages/0f/ec/266ed7a46bda0c7108aba5c2ad96c2e93d47e4ca4cdd4f51f0e926811136/scipion-em-tomo-3.9.1.tar.gz (from https://pypi.org/simple/scipion-em-tomo/), version: 3.9.1
2026-02-10T22:23:49,913   Skipping link: No binaries permitted for scipion-em-tomo: https://files.pythonhosted.org/packages/7a/c2/31d44262fb95ea9594fa85c91fa942ad8d338d61f127b648f7871b64cf23/scipion_em_tomo-3.9.1-py3-none-any.whl (from https://pypi.org/simple/scipion-em-tomo/)
2026-02-10T22:23:49,913   Found link https://files.pythonhosted.org/packages/60/8b/c21a18e69d44b6d787516fdc21df98fb5689e009c02c311e5afebafd7908/scipion-em-tomo-3.9.2.tar.gz (from https://pypi.org/simple/scipion-em-tomo/), version: 3.9.2
2026-02-10T22:23:49,914   Skipping link: No binaries permitted for scipion-em-tomo: https://files.pythonhosted.org/packages/50/92/59978fd6aba3ef7870ce4b2375edd55d23a659e763ed1029c3aa79c891b6/scipion_em_tomo-3.9.2-py3-none-any.whl (from https://pypi.org/simple/scipion-em-tomo/)
2026-02-10T22:23:49,915   Skipping link: No binaries permitted for scipion-em-tomo: https://files.pythonhosted.org/packages/cb/4f/a2de4aaa136fe23ab354cb48bcb737e2a7524fe01802fe65750ae1111c3a/scipion_em_tomo-3.10.0-py3-none-any.whl (from https://pypi.org/simple/scipion-em-tomo/) (requires-python:>=3.8)
2026-02-10T22:23:49,916   Found link https://files.pythonhosted.org/packages/49/54/22228b763352d92de03bc5b6bc138e5322ff781328aee51b04266c127eff/scipion_em_tomo-3.10.0.tar.gz (from https://pypi.org/simple/scipion-em-tomo/) (requires-python:>=3.8), version: 3.10.0
2026-02-10T22:23:49,916   Skipping link: No binaries permitted for scipion-em-tomo: https://files.pythonhosted.org/packages/0e/32/615a433f3e22df1e6e1f9d83f73e693957a7f962ef7663eb25d563a6f798/scipion_em_tomo-3.11.3-py3-none-any.whl (from https://pypi.org/simple/scipion-em-tomo/) (requires-python:>=3.8)
2026-02-10T22:23:49,917   Found link https://files.pythonhosted.org/packages/c2/25/445eaf87d65ca0ac47358a9252ccf324aa1458b28cc4b771e7888c5af2e3/scipion_em_tomo-3.11.3.tar.gz (from https://pypi.org/simple/scipion-em-tomo/) (requires-python:>=3.8), version: 3.11.3
2026-02-10T22:23:49,918   Skipping link: No binaries permitted for scipion-em-tomo: https://files.pythonhosted.org/packages/5c/63/0543444ee4f3692f8c5f0741134565be82dc5a33bdc7d01c15b750430332/scipion_em_tomo-3.11.4-py3-none-any.whl (from https://pypi.org/simple/scipion-em-tomo/) (requires-python:>=3.8)
2026-02-10T22:23:49,919   Found link https://files.pythonhosted.org/packages/42/01/a403683bcf21535facb41ea57a05ed467510edca4107faf97894a432eea5/scipion_em_tomo-3.11.4.tar.gz (from https://pypi.org/simple/scipion-em-tomo/) (requires-python:>=3.8), version: 3.11.4
2026-02-10T22:23:49,919 Fetching project page and analyzing links: https://www.piwheels.org/simple/scipion-em-tomo/
2026-02-10T22:23:49,920 Getting page https://www.piwheels.org/simple/scipion-em-tomo/
2026-02-10T22:23:49,921 Found index url https://www.piwheels.org/simple
2026-02-10T22:23:50,079 Fetched page https://www.piwheels.org/simple/scipion-em-tomo/ as text/html
2026-02-10T22:23:50,084   Skipping link: No binaries permitted for scipion-em-tomo: https://www.piwheels.org/simple/scipion-em-tomo/scipion_em_tomo-3.11.3-py3-none-any.whl#sha256=32aa2d896ab04309432bdfd4a5131ea537c5fc4e7ed801aba9a5d66c3b54a700 (from https://www.piwheels.org/simple/scipion-em-tomo/) (requires-python:>=3.8)
2026-02-10T22:23:50,084   Skipping link: No binaries permitted for scipion-em-tomo: https://archive1.piwheels.org/simple/scipion-em-tomo/scipion_em_tomo-3.10.0-py3-none-any.whl#sha256=d7426bea38a94f109569c29238c3c16a8df365ca04099b510f1e699c95a7b403 (from https://www.piwheels.org/simple/scipion-em-tomo/) (requires-python:>=3.8)
2026-02-10T22:23:50,085   Skipping link: No binaries permitted for scipion-em-tomo: https://archive1.piwheels.org/simple/scipion-em-tomo/scipion_em_tomo-3.0.10-py3-none-any.whl#sha256=ff7c8a2634853720654c729d8868be0ee38e6a06400157ea95521bb4bce439f2 (from https://www.piwheels.org/simple/scipion-em-tomo/)
2026-02-10T22:23:50,086   Skipping link: No binaries permitted for scipion-em-tomo: https://archive1.piwheels.org/simple/scipion-em-tomo/scipion_em_tomo-3.0.9-py3-none-any.whl#sha256=0e3d4d4680d976ec72c3bd289d10d07b8dd7673d9a5465dfa9a4a418b87fc963 (from https://www.piwheels.org/simple/scipion-em-tomo/)
2026-02-10T22:23:50,086   Skipping link: No binaries permitted for scipion-em-tomo: https://archive1.piwheels.org/simple/scipion-em-tomo/scipion_em_tomo-3.0.8-py3-none-any.whl#sha256=d692dd0a5b52a2ce3fcff9dd4c1709e41ab5d5bf30aaf7668ee5660e8170205c (from https://www.piwheels.org/simple/scipion-em-tomo/)
2026-02-10T22:23:50,087   Skipping link: No binaries permitted for scipion-em-tomo: https://archive1.piwheels.org/simple/scipion-em-tomo/scipion_em_tomo-3.0.7-py3-none-any.whl#sha256=fea40e7f7927c46468d6be4159fda7ddaf7ee32fc06d9cd350283bc411d82c35 (from https://www.piwheels.org/simple/scipion-em-tomo/)
2026-02-10T22:23:50,088   Skipping link: No binaries permitted for scipion-em-tomo: https://archive1.piwheels.org/simple/scipion-em-tomo/scipion_em_tomo-3.0.6-py3-none-any.whl#sha256=8c575df02024489797dfb206c8f3ab8a443df79c36f23e6e4255c65ad80505dd (from https://www.piwheels.org/simple/scipion-em-tomo/)
2026-02-10T22:23:50,088   Skipping link: No binaries permitted for scipion-em-tomo: https://archive1.piwheels.org/simple/scipion-em-tomo/scipion_em_tomo-3.0.5-py3-none-any.whl#sha256=1d0acf0b97a40541a691c021428641453291095b6c74469987d786cc1b25eb84 (from https://www.piwheels.org/simple/scipion-em-tomo/)
2026-02-10T22:23:50,089   Skipping link: No binaries permitted for scipion-em-tomo: https://archive1.piwheels.org/simple/scipion-em-tomo/scipion_em_tomo-3.0.4-py3-none-any.whl#sha256=9f0c7111043ce030d7e1d75bacdc774b1e4ef59837aa7f681e824cfdb483d6ff (from https://www.piwheels.org/simple/scipion-em-tomo/)
2026-02-10T22:23:50,089   Skipping link: No binaries permitted for scipion-em-tomo: https://archive1.piwheels.org/simple/scipion-em-tomo/scipion_em_tomo-3.0.2-py3-none-any.whl#sha256=ab66f4be38893d6016420d476acda5c18d85f739383935906efdb66b2e0bdfab (from https://www.piwheels.org/simple/scipion-em-tomo/)
2026-02-10T22:23:50,090   Skipping link: No binaries permitted for scipion-em-tomo: https://archive1.piwheels.org/simple/scipion-em-tomo/scipion_em_tomo-3.0.0-py3-none-any.whl#sha256=3eae830f3329dbe994cc8155a307396f86e4643ad956f61010a1fe281a0d3556 (from https://www.piwheels.org/simple/scipion-em-tomo/)
2026-02-10T22:23:50,090   Skipping link: No binaries permitted for scipion-em-tomo: https://archive1.piwheels.org/simple/scipion-em-tomo/scipion_em_tomo-0.0.1-py3-none-any.whl#sha256=ad9ff32c3d6574e3915e471c471427e4e732a3cf21f3a5cb675edb0d2c083607 (from https://www.piwheels.org/simple/scipion-em-tomo/)
2026-02-10T22:23:50,091 Skipping link: not a file: https://www.piwheels.org/simple/scipion-em-tomo/
2026-02-10T22:23:50,091 Skipping link: not a file: https://pypi.org/simple/scipion-em-tomo/
2026-02-10T22:23:50,115 Given no hashes to check 1 links for project 'scipion-em-tomo': discarding no candidates
2026-02-10T22:23:50,133 Collecting scipion-em-tomo==3.11.4
2026-02-10T22:23:50,136   Created temporary directory: /tmp/pip-unpack-mi0x16xs
2026-02-10T22:23:50,347   Downloading scipion_em_tomo-3.11.4.tar.gz (244 kB)
2026-02-10T22:23:50,658   Added scipion-em-tomo==3.11.4 from https://files.pythonhosted.org/packages/42/01/a403683bcf21535facb41ea57a05ed467510edca4107faf97894a432eea5/scipion_em_tomo-3.11.4.tar.gz to build tracker '/tmp/pip-build-tracker-ha13c2kp'
2026-02-10T22:23:50,663   Created temporary directory: /tmp/pip-build-env-9i2gliq6
2026-02-10T22:23:50,668   Installing build dependencies: started
2026-02-10T22:23:50,669   Running command pip subprocess to install build dependencies
2026-02-10T22:23:51,802   Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11)
2026-02-10T22:23:52,421   DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-02-10T22:23:52,444   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-02-10T22:23:54,160   Collecting setuptools
2026-02-10T22:23:54,179     Using cached setuptools-82.0.0-py3-none-any.whl (1.0 MB)
2026-02-10T22:23:54,448   Collecting wheel
2026-02-10T22:23:54,462     Using cached https://www.piwheels.org/simple/wheel/wheel-0.46.3-py3-none-any.whl (30 kB)
2026-02-10T22:23:54,644   Collecting packaging>=24.0
2026-02-10T22:23:54,660     Using cached https://www.piwheels.org/simple/packaging/packaging-26.0-py3-none-any.whl (74 kB)
2026-02-10T22:23:57,649   Installing collected packages: setuptools, packaging, wheel
2026-02-10T22:24:01,095     Creating /tmp/pip-build-env-9i2gliq6/overlay/local/bin
2026-02-10T22:24:01,097     changing mode of /tmp/pip-build-env-9i2gliq6/overlay/local/bin/wheel to 755
2026-02-10T22:24:01,118   Successfully installed packaging-26.0 setuptools-82.0.0 wheel-0.46.3
2026-02-10T22:24:01,398   Installing build dependencies: finished with status 'done'
2026-02-10T22:24:01,404   Getting requirements to build wheel: started
2026-02-10T22:24:01,405   Running command Getting requirements to build wheel
2026-02-10T22:24:01,996   No `packages` or `py_modules` configuration, performing automatic discovery.
2026-02-10T22:24:01,996   `flat-layout` detected -- analysing .
2026-02-10T22:24:02,015   discovered packages -- ['tomo', 'tomo.convert', 'tomo.protocols', 'tomo.viewers', 'tomo.tests', 'tomo.templates', 'tomo.protocols.deprecated', 'tomo.viewers.deprecated']
2026-02-10T22:24:02,021   /tmp/pip-build-env-9i2gliq6/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated
2026-02-10T22:24:02,021   !!

2026-02-10T22:24:02,022           ********************************************************************************
2026-02-10T22:24:02,023           Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0).

2026-02-10T22:24:02,024           By 2027-Feb-18, you need to update your project and remove deprecated calls
2026-02-10T22:24:02,024           or your builds will no longer be supported.

2026-02-10T22:24:02,025           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-02-10T22:24:02,026           ********************************************************************************

2026-02-10T22:24:02,027   !!
2026-02-10T22:24:02,028     corresp(dist, value, root_dir)
2026-02-10T22:24:02,099   /tmp/pip-build-env-9i2gliq6/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-02-10T22:24:02,100   !!

2026-02-10T22:24:02,100           ********************************************************************************
2026-02-10T22:24:02,101           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-02-10T22:24:02,102           License :: OSI Approved :: GNU General Public License v3 (GPLv3)

2026-02-10T22:24:02,103           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-02-10T22:24:02,104           ********************************************************************************

2026-02-10T22:24:02,105   !!
2026-02-10T22:24:02,106     dist._finalize_license_expression()
2026-02-10T22:24:02,106   /tmp/pip-build-env-9i2gliq6/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-02-10T22:24:02,107   !!

2026-02-10T22:24:02,108           ********************************************************************************
2026-02-10T22:24:02,108           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-02-10T22:24:02,109           License :: OSI Approved :: GNU General Public License v3 (GPLv3)

2026-02-10T22:24:02,111           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-02-10T22:24:02,111           ********************************************************************************

2026-02-10T22:24:02,113   !!
2026-02-10T22:24:02,113     self._finalize_license_expression()
2026-02-10T22:24:02,114   running egg_info
2026-02-10T22:24:02,119   writing scipion_em_tomo.egg-info/PKG-INFO
2026-02-10T22:24:02,122   writing dependency_links to scipion_em_tomo.egg-info/dependency_links.txt
2026-02-10T22:24:02,124   writing entry points to scipion_em_tomo.egg-info/entry_points.txt
2026-02-10T22:24:02,125   writing requirements to scipion_em_tomo.egg-info/requires.txt
2026-02-10T22:24:02,126   writing top-level names to scipion_em_tomo.egg-info/top_level.txt
2026-02-10T22:24:02,156   reading manifest file 'scipion_em_tomo.egg-info/SOURCES.txt'
2026-02-10T22:24:02,163   reading manifest template 'MANIFEST.in'
2026-02-10T22:24:02,166   adding license file 'LICENSE'
2026-02-10T22:24:02,172   writing manifest file 'scipion_em_tomo.egg-info/SOURCES.txt'
2026-02-10T22:24:02,269   Getting requirements to build wheel: finished with status 'done'
2026-02-10T22:24:02,272   Created temporary directory: /tmp/pip-modern-metadata-l9vbc42d
2026-02-10T22:24:02,275   Preparing metadata (pyproject.toml): started
2026-02-10T22:24:02,276   Running command Preparing metadata (pyproject.toml)
2026-02-10T22:24:02,838   No `packages` or `py_modules` configuration, performing automatic discovery.
2026-02-10T22:24:02,838   `flat-layout` detected -- analysing .
2026-02-10T22:24:02,855   discovered packages -- ['tomo', 'tomo.convert', 'tomo.protocols', 'tomo.viewers', 'tomo.tests', 'tomo.templates', 'tomo.protocols.deprecated', 'tomo.viewers.deprecated']
2026-02-10T22:24:02,860   /tmp/pip-build-env-9i2gliq6/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated
2026-02-10T22:24:02,861   !!

2026-02-10T22:24:02,862           ********************************************************************************
2026-02-10T22:24:02,862           Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0).

2026-02-10T22:24:02,864           By 2027-Feb-18, you need to update your project and remove deprecated calls
2026-02-10T22:24:02,864           or your builds will no longer be supported.

2026-02-10T22:24:02,865           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-02-10T22:24:02,866           ********************************************************************************

2026-02-10T22:24:02,867   !!
2026-02-10T22:24:02,867     corresp(dist, value, root_dir)
2026-02-10T22:24:02,936   /tmp/pip-build-env-9i2gliq6/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-02-10T22:24:02,936   !!

2026-02-10T22:24:02,937           ********************************************************************************
2026-02-10T22:24:02,938           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-02-10T22:24:02,939           License :: OSI Approved :: GNU General Public License v3 (GPLv3)

2026-02-10T22:24:02,940           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-02-10T22:24:02,941           ********************************************************************************

2026-02-10T22:24:02,942   !!
2026-02-10T22:24:02,942     dist._finalize_license_expression()
2026-02-10T22:24:02,943   /tmp/pip-build-env-9i2gliq6/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-02-10T22:24:02,944   !!

2026-02-10T22:24:02,945           ********************************************************************************
2026-02-10T22:24:02,945           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-02-10T22:24:02,947           License :: OSI Approved :: GNU General Public License v3 (GPLv3)

2026-02-10T22:24:02,948           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-02-10T22:24:02,949           ********************************************************************************

2026-02-10T22:24:02,950   !!
2026-02-10T22:24:02,950     self._finalize_license_expression()
2026-02-10T22:24:02,951   running dist_info
2026-02-10T22:24:02,959   creating /tmp/pip-modern-metadata-l9vbc42d/scipion_em_tomo.egg-info
2026-02-10T22:24:02,959   writing /tmp/pip-modern-metadata-l9vbc42d/scipion_em_tomo.egg-info/PKG-INFO
2026-02-10T22:24:02,963   writing dependency_links to /tmp/pip-modern-metadata-l9vbc42d/scipion_em_tomo.egg-info/dependency_links.txt
2026-02-10T22:24:02,965   writing entry points to /tmp/pip-modern-metadata-l9vbc42d/scipion_em_tomo.egg-info/entry_points.txt
2026-02-10T22:24:02,966   writing requirements to /tmp/pip-modern-metadata-l9vbc42d/scipion_em_tomo.egg-info/requires.txt
2026-02-10T22:24:02,967   writing top-level names to /tmp/pip-modern-metadata-l9vbc42d/scipion_em_tomo.egg-info/top_level.txt
2026-02-10T22:24:02,968   writing manifest file '/tmp/pip-modern-metadata-l9vbc42d/scipion_em_tomo.egg-info/SOURCES.txt'
2026-02-10T22:24:02,995   reading manifest file '/tmp/pip-modern-metadata-l9vbc42d/scipion_em_tomo.egg-info/SOURCES.txt'
2026-02-10T22:24:02,997   reading manifest template 'MANIFEST.in'
2026-02-10T22:24:03,000   adding license file 'LICENSE'
2026-02-10T22:24:03,005   writing manifest file '/tmp/pip-modern-metadata-l9vbc42d/scipion_em_tomo.egg-info/SOURCES.txt'
2026-02-10T22:24:03,006   creating '/tmp/pip-modern-metadata-l9vbc42d/scipion_em_tomo-3.11.4.dist-info'
2026-02-10T22:24:03,132   Preparing metadata (pyproject.toml): finished with status 'done'
2026-02-10T22:24:03,136   Source in /tmp/pip-wheel-0y_wa6d0/scipion-em-tomo_2bd7d53e359545b39a7b240c44c9c78f has version 3.11.4, which satisfies requirement scipion-em-tomo==3.11.4 from https://files.pythonhosted.org/packages/42/01/a403683bcf21535facb41ea57a05ed467510edca4107faf97894a432eea5/scipion_em_tomo-3.11.4.tar.gz
2026-02-10T22:24:03,137   Removed scipion-em-tomo==3.11.4 from https://files.pythonhosted.org/packages/42/01/a403683bcf21535facb41ea57a05ed467510edca4107faf97894a432eea5/scipion_em_tomo-3.11.4.tar.gz from build tracker '/tmp/pip-build-tracker-ha13c2kp'
2026-02-10T22:24:03,143 Created temporary directory: /tmp/pip-unpack-k4waljms
2026-02-10T22:24:03,143 Building wheels for collected packages: scipion-em-tomo
2026-02-10T22:24:03,148   Created temporary directory: /tmp/pip-wheel-koae4wsq
2026-02-10T22:24:03,148   Destination directory: /tmp/pip-wheel-koae4wsq
2026-02-10T22:24:03,151   Building wheel for scipion-em-tomo (pyproject.toml): started
2026-02-10T22:24:03,152   Running command Building wheel for scipion-em-tomo (pyproject.toml)
2026-02-10T22:24:03,704   No `packages` or `py_modules` configuration, performing automatic discovery.
2026-02-10T22:24:03,705   `flat-layout` detected -- analysing .
2026-02-10T22:24:03,722   discovered packages -- ['tomo', 'tomo.convert', 'tomo.protocols', 'tomo.viewers', 'tomo.tests', 'tomo.templates', 'tomo.protocols.deprecated', 'tomo.viewers.deprecated']
2026-02-10T22:24:03,728   /tmp/pip-build-env-9i2gliq6/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated
2026-02-10T22:24:03,728   !!

2026-02-10T22:24:03,729           ********************************************************************************
2026-02-10T22:24:03,730           Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0).

2026-02-10T22:24:03,731           By 2027-Feb-18, you need to update your project and remove deprecated calls
2026-02-10T22:24:03,732           or your builds will no longer be supported.

2026-02-10T22:24:03,733           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-02-10T22:24:03,734           ********************************************************************************

2026-02-10T22:24:03,735   !!
2026-02-10T22:24:03,736     corresp(dist, value, root_dir)
2026-02-10T22:24:03,796   /tmp/pip-build-env-9i2gliq6/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-02-10T22:24:03,797   !!

2026-02-10T22:24:03,798           ********************************************************************************
2026-02-10T22:24:03,798           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-02-10T22:24:03,799           License :: OSI Approved :: GNU General Public License v3 (GPLv3)

2026-02-10T22:24:03,800           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-02-10T22:24:03,801           ********************************************************************************

2026-02-10T22:24:03,802   !!
2026-02-10T22:24:03,802     dist._finalize_license_expression()
2026-02-10T22:24:03,803   /tmp/pip-build-env-9i2gliq6/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-02-10T22:24:03,803   !!

2026-02-10T22:24:03,804           ********************************************************************************
2026-02-10T22:24:03,805           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-02-10T22:24:03,806           License :: OSI Approved :: GNU General Public License v3 (GPLv3)

2026-02-10T22:24:03,807           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-02-10T22:24:03,807           ********************************************************************************

2026-02-10T22:24:03,809   !!
2026-02-10T22:24:03,809     self._finalize_license_expression()
2026-02-10T22:24:03,810   running bdist_wheel
2026-02-10T22:24:03,821   running build
2026-02-10T22:24:03,821   running build_py
2026-02-10T22:24:03,827   creating build/lib/tomo
2026-02-10T22:24:03,829   copying tomo/__init__.py -> build/lib/tomo
2026-02-10T22:24:03,831   copying tomo/wizards.py -> build/lib/tomo
2026-02-10T22:24:03,833   copying tomo/objects.py -> build/lib/tomo
2026-02-10T22:24:03,837   copying tomo/constants.py -> build/lib/tomo
2026-02-10T22:24:03,839   copying tomo/utils.py -> build/lib/tomo
2026-02-10T22:24:03,842   creating build/lib/tomo/convert
2026-02-10T22:24:03,843   copying tomo/convert/__init__.py -> build/lib/tomo/convert
2026-02-10T22:24:03,846   copying tomo/convert/mdoc.py -> build/lib/tomo/convert
2026-02-10T22:24:03,848   copying tomo/convert/convert.py -> build/lib/tomo/convert
2026-02-10T22:24:03,851   creating build/lib/tomo/protocols
2026-02-10T22:24:03,852   copying tomo/protocols/protocol_ts_convert_coords3d.py -> build/lib/tomo/protocols
2026-02-10T22:24:03,855   copying tomo/protocols/protocol_import_tomomasks.py -> build/lib/tomo/protocols
2026-02-10T22:24:03,857   copying tomo/protocols/protocol_ts_base.py -> build/lib/tomo/protocols
2026-02-10T22:24:03,859   copying tomo/protocols/protocol_ts_consensus_alignment.py -> build/lib/tomo/protocols
2026-02-10T22:24:03,862   copying tomo/protocols/protocol_import_tomograms.py -> build/lib/tomo/protocols
2026-02-10T22:24:03,864   copying tomo/protocols/__init__.py -> build/lib/tomo/protocols
2026-02-10T22:24:03,866   copying tomo/protocols/protocol_assignTransformationTS.py -> build/lib/tomo/protocols
2026-02-10T22:24:03,869   copying tomo/protocols/protocol_ts_import.py -> build/lib/tomo/protocols
2026-02-10T22:24:03,872   copying tomo/protocols/protocol_base.py -> build/lib/tomo/protocols
2026-02-10T22:24:03,875   copying tomo/protocols/protocol_particles_to_subtomograms.py -> build/lib/tomo/protocols
2026-02-10T22:24:03,877   copying tomo/protocols/protocol_import_subtomograms.py -> build/lib/tomo/protocols
2026-02-10T22:24:03,879   copying tomo/protocols/protocol_import_coordinates.py -> build/lib/tomo/protocols
2026-02-10T22:24:03,882   copying tomo/protocols/protocol_mask_coordinates.py -> build/lib/tomo/protocols
2026-02-10T22:24:03,884   copying tomo/protocols/protocol_mesh_from_segmentation.py -> build/lib/tomo/protocols
2026-02-10T22:24:03,887   copying tomo/protocols/protocol_misalignTS.py -> build/lib/tomo/protocols
2026-02-10T22:24:03,890   copying tomo/protocols/protocol_compose_TS.py -> build/lib/tomo/protocols
2026-02-10T22:24:03,893   copying tomo/protocols/protocol_ts_import_coordinates.py -> build/lib/tomo/protocols
2026-02-10T22:24:03,896   copying tomo/protocols/protocol_ts_estimate_ctf.py -> build/lib/tomo/protocols
2026-02-10T22:24:03,898   copying tomo/protocols/protocol_ts_from_tomograms.py -> build/lib/tomo/protocols
2026-02-10T22:24:03,900   copying tomo/protocols/protocol_tomo_apply_tomomask.py -> build/lib/tomo/protocols
2026-02-10T22:24:03,903   copying tomo/protocols/protocol_split_evenodd_subtomos.py -> build/lib/tomo/protocols
2026-02-10T22:24:03,905   copying tomo/protocols/protocol_tomo_to_mics.py -> build/lib/tomo/protocols
2026-02-10T22:24:03,907   copying tomo/protocols/protocol_correct_tilt_offset.py -> build/lib/tomo/protocols
2026-02-10T22:24:03,909   copying tomo/protocols/protocol_import_ctf.py -> build/lib/tomo/protocols
2026-02-10T22:24:03,911   copying tomo/protocols/protocol_export_coords.py -> build/lib/tomo/protocols
2026-02-10T22:24:03,914   copying tomo/protocols/protocol_invert_tilt_angles.py -> build/lib/tomo/protocols
2026-02-10T22:24:03,916   copying tomo/protocols/protocol_ts_correct_motion.py -> build/lib/tomo/protocols
2026-02-10T22:24:03,919   copying tomo/protocols/protocol_project_coordinates.py -> build/lib/tomo/protocols
2026-02-10T22:24:03,921   copying tomo/protocols/protocol_import_coordinates_from_scipion.py -> build/lib/tomo/protocols
2026-02-10T22:24:03,924   copying tomo/protocols/protocol_extract_coordinates.py -> build/lib/tomo/protocols
2026-02-10T22:24:03,927   creating build/lib/tomo/viewers
2026-02-10T22:24:03,929   copying tomo/viewers/viewers_data.py -> build/lib/tomo/viewers
2026-02-10T22:24:03,931   copying tomo/viewers/__init__.py -> build/lib/tomo/viewers
2026-02-10T22:24:03,933   copying tomo/viewers/viewer_split_evenodd.py -> build/lib/tomo/viewers
2026-02-10T22:24:03,935   copying tomo/viewers/views_tkinter_tree.py -> build/lib/tomo/viewers
2026-02-10T22:24:03,942   copying tomo/viewers/views.py -> build/lib/tomo/viewers
2026-02-10T22:24:03,945   creating build/lib/tomo/tests
2026-02-10T22:24:03,946   copying tomo/tests/__init__.py -> build/lib/tomo/tests
2026-02-10T22:24:03,949   copying tomo/tests/test_join_sets.py -> build/lib/tomo/tests
2026-02-10T22:24:03,952   copying tomo/tests/test_import.py -> build/lib/tomo/tests
2026-02-10T22:24:03,955   copying tomo/tests/test_tomo_base.py -> build/lib/tomo/tests
2026-02-10T22:24:03,959   copying tomo/tests/tests_tomo_apply_tomomask.py -> build/lib/tomo/tests
2026-02-10T22:24:03,961   copying tomo/tests/test_correct_tilt_offset.py -> build/lib/tomo/tests
2026-02-10T22:24:03,963   copying tomo/tests/test_compose_TS.py -> build/lib/tomo/tests
2026-02-10T22:24:03,965   copying tomo/tests/test_export.py -> build/lib/tomo/tests
2026-02-10T22:24:03,968   copying tomo/tests/test_transformations.py -> build/lib/tomo/tests
2026-02-10T22:24:03,970   copying tomo/tests/test_import_with_pattern.py -> build/lib/tomo/tests
2026-02-10T22:24:03,973   copying tomo/tests/test_mesh_from_segmentation.py -> build/lib/tomo/tests
2026-02-10T22:24:03,976   copying tomo/tests/test_ts_from_tomos.py -> build/lib/tomo/tests
2026-02-10T22:24:03,978   copying tomo/tests/tests_ts_invert_tilt_angles.py -> build/lib/tomo/tests
2026-02-10T22:24:03,980   copying tomo/tests/test_objects.py -> build/lib/tomo/tests
2026-02-10T22:24:03,983   copying tomo/tests/test_base_centralized_layer.py -> build/lib/tomo/tests
2026-02-10T22:24:03,988   creating build/lib/tomo/protocols/deprecated
2026-02-10T22:24:03,990   copying tomo/protocols/deprecated/protocol_alignment_assign.py -> build/lib/tomo/protocols/deprecated
2026-02-10T22:24:03,992   copying tomo/protocols/deprecated/__init__.py -> build/lib/tomo/protocols/deprecated
2026-02-10T22:24:03,994   copying tomo/protocols/deprecated/protocol_assign_tomo2tomoMask.py -> build/lib/tomo/protocols/deprecated
2026-02-10T22:24:03,996   copying tomo/protocols/deprecated/protocol_fit_ellipsoid.py -> build/lib/tomo/protocols/deprecated
2026-02-10T22:24:03,999   copying tomo/protocols/deprecated/protocol_consensus_classes_subtomo.py -> build/lib/tomo/protocols/deprecated
2026-02-10T22:24:04,001   copying tomo/protocols/deprecated/protocol_assign_tomo2subtomo.py -> build/lib/tomo/protocols/deprecated
2026-02-10T22:24:04,003   copying tomo/protocols/deprecated/protocol_landmark_to_2d.py -> build/lib/tomo/protocols/deprecated
2026-02-10T22:24:04,006   copying tomo/protocols/deprecated/protocol_rotate_astigmatism.py -> build/lib/tomo/protocols/deprecated
2026-02-10T22:24:04,008   copying tomo/protocols/deprecated/protocol_ctf_validate.py -> build/lib/tomo/protocols/deprecated
2026-02-10T22:24:04,010   copying tomo/protocols/deprecated/protocol_ctf_consensus.py -> build/lib/tomo/protocols/deprecated
2026-02-10T22:24:04,013   creating build/lib/tomo/viewers/deprecated
2026-02-10T22:24:04,015   copying tomo/viewers/deprecated/__init__.py -> build/lib/tomo/viewers/deprecated
2026-02-10T22:24:04,017   copying tomo/viewers/deprecated/viewer_ctf_tomo_consensus.py -> build/lib/tomo/viewers/deprecated
2026-02-10T22:24:04,018   running egg_info
2026-02-10T22:24:04,028   writing scipion_em_tomo.egg-info/PKG-INFO
2026-02-10T22:24:04,031   writing dependency_links to scipion_em_tomo.egg-info/dependency_links.txt
2026-02-10T22:24:04,033   writing entry points to scipion_em_tomo.egg-info/entry_points.txt
2026-02-10T22:24:04,034   writing requirements to scipion_em_tomo.egg-info/requires.txt
2026-02-10T22:24:04,035   writing top-level names to scipion_em_tomo.egg-info/top_level.txt
2026-02-10T22:24:04,052   reading manifest file 'scipion_em_tomo.egg-info/SOURCES.txt'
2026-02-10T22:24:04,058   reading manifest template 'MANIFEST.in'
2026-02-10T22:24:04,062   adding license file 'LICENSE'
2026-02-10T22:24:04,068   writing manifest file 'scipion_em_tomo.egg-info/SOURCES.txt'
2026-02-10T22:24:04,075   copying tomo/icon.png -> build/lib/tomo
2026-02-10T22:24:04,078   copying tomo/protocols.conf -> build/lib/tomo
2026-02-10T22:24:04,080   creating build/lib/tomo/templates
2026-02-10T22:24:04,081   copying tomo/templates/202601_Streaming_HIV.json.template -> build/lib/tomo/templates
2026-02-10T22:24:04,084   copying tomo/templates/tutorial_nonOrientedPicking_ribosome.json.template -> build/lib/tomo/templates
2026-02-10T22:24:04,087   copying tomo/templates/tutorial_STA_HIV.json.template -> build/lib/tomo/templates
2026-02-10T22:24:04,090   copying tomo/templates/202601_F_Streaming_HIV.json.template -> build/lib/tomo/templates
2026-02-10T22:24:04,093   copying tomo/templates/tutorial_STA_CellEnv_Chlamy.json.template -> build/lib/tomo/templates
2026-02-10T22:24:04,096   copying tomo/templates/202601_Streaming_Chlamy.json.template -> build/lib/tomo/templates
2026-02-10T22:24:04,098   copying tomo/templates/202601_F_Streaming_Chlamy.json.template -> build/lib/tomo/templates
2026-02-10T22:24:04,101   copying tomo/templates/tutorial_STA_apoferritin.json.template -> build/lib/tomo/templates
2026-02-10T22:24:04,120   installing to build/bdist.linux-armv7l/wheel
2026-02-10T22:24:04,120   running install
2026-02-10T22:24:04,144   running install_lib
2026-02-10T22:24:04,150   creating build/bdist.linux-armv7l/wheel
2026-02-10T22:24:04,152   creating build/bdist.linux-armv7l/wheel/tomo
2026-02-10T22:24:04,153   copying build/lib/tomo/__init__.py -> build/bdist.linux-armv7l/wheel/./tomo
2026-02-10T22:24:04,156   creating build/bdist.linux-armv7l/wheel/tomo/convert
2026-02-10T22:24:04,157   copying build/lib/tomo/convert/__init__.py -> build/bdist.linux-armv7l/wheel/./tomo/convert
2026-02-10T22:24:04,160   copying build/lib/tomo/convert/mdoc.py -> build/bdist.linux-armv7l/wheel/./tomo/convert
2026-02-10T22:24:04,162   copying build/lib/tomo/convert/convert.py -> build/bdist.linux-armv7l/wheel/./tomo/convert
2026-02-10T22:24:04,166   creating build/bdist.linux-armv7l/wheel/tomo/protocols
2026-02-10T22:24:04,167   copying build/lib/tomo/protocols/protocol_ts_convert_coords3d.py -> build/bdist.linux-armv7l/wheel/./tomo/protocols
2026-02-10T22:24:04,169   copying build/lib/tomo/protocols/protocol_import_tomomasks.py -> build/bdist.linux-armv7l/wheel/./tomo/protocols
2026-02-10T22:24:04,171   copying build/lib/tomo/protocols/protocol_ts_base.py -> build/bdist.linux-armv7l/wheel/./tomo/protocols
2026-02-10T22:24:04,173   copying build/lib/tomo/protocols/protocol_ts_consensus_alignment.py -> build/bdist.linux-armv7l/wheel/./tomo/protocols
2026-02-10T22:24:04,176   copying build/lib/tomo/protocols/protocol_import_tomograms.py -> build/bdist.linux-armv7l/wheel/./tomo/protocols
2026-02-10T22:24:04,178   copying build/lib/tomo/protocols/__init__.py -> build/bdist.linux-armv7l/wheel/./tomo/protocols
2026-02-10T22:24:04,180   copying build/lib/tomo/protocols/protocol_assignTransformationTS.py -> build/bdist.linux-armv7l/wheel/./tomo/protocols
2026-02-10T22:24:04,182   copying build/lib/tomo/protocols/protocol_ts_import.py -> build/bdist.linux-armv7l/wheel/./tomo/protocols
2026-02-10T22:24:04,185   copying build/lib/tomo/protocols/protocol_base.py -> build/bdist.linux-armv7l/wheel/./tomo/protocols
2026-02-10T22:24:04,187   copying build/lib/tomo/protocols/protocol_particles_to_subtomograms.py -> build/bdist.linux-armv7l/wheel/./tomo/protocols
2026-02-10T22:24:04,189   copying build/lib/tomo/protocols/protocol_import_subtomograms.py -> build/bdist.linux-armv7l/wheel/./tomo/protocols
2026-02-10T22:24:04,191   copying build/lib/tomo/protocols/protocol_import_coordinates.py -> build/bdist.linux-armv7l/wheel/./tomo/protocols
2026-02-10T22:24:04,194   creating build/bdist.linux-armv7l/wheel/tomo/protocols/deprecated
2026-02-10T22:24:04,196   copying build/lib/tomo/protocols/deprecated/protocol_alignment_assign.py -> build/bdist.linux-armv7l/wheel/./tomo/protocols/deprecated
2026-02-10T22:24:04,198   copying build/lib/tomo/protocols/deprecated/__init__.py -> build/bdist.linux-armv7l/wheel/./tomo/protocols/deprecated
2026-02-10T22:24:04,199   copying build/lib/tomo/protocols/deprecated/protocol_assign_tomo2tomoMask.py -> build/bdist.linux-armv7l/wheel/./tomo/protocols/deprecated
2026-02-10T22:24:04,202   copying build/lib/tomo/protocols/deprecated/protocol_fit_ellipsoid.py -> build/bdist.linux-armv7l/wheel/./tomo/protocols/deprecated
2026-02-10T22:24:04,204   copying build/lib/tomo/protocols/deprecated/protocol_consensus_classes_subtomo.py -> build/bdist.linux-armv7l/wheel/./tomo/protocols/deprecated
2026-02-10T22:24:04,206   copying build/lib/tomo/protocols/deprecated/protocol_assign_tomo2subtomo.py -> build/bdist.linux-armv7l/wheel/./tomo/protocols/deprecated
2026-02-10T22:24:04,208   copying build/lib/tomo/protocols/deprecated/protocol_landmark_to_2d.py -> build/bdist.linux-armv7l/wheel/./tomo/protocols/deprecated
2026-02-10T22:24:04,210   copying build/lib/tomo/protocols/deprecated/protocol_rotate_astigmatism.py -> build/bdist.linux-armv7l/wheel/./tomo/protocols/deprecated
2026-02-10T22:24:04,213   copying build/lib/tomo/protocols/deprecated/protocol_ctf_validate.py -> build/bdist.linux-armv7l/wheel/./tomo/protocols/deprecated
2026-02-10T22:24:04,215   copying build/lib/tomo/protocols/deprecated/protocol_ctf_consensus.py -> build/bdist.linux-armv7l/wheel/./tomo/protocols/deprecated
2026-02-10T22:24:04,218   copying build/lib/tomo/protocols/protocol_mask_coordinates.py -> build/bdist.linux-armv7l/wheel/./tomo/protocols
2026-02-10T22:24:04,220   copying build/lib/tomo/protocols/protocol_mesh_from_segmentation.py -> build/bdist.linux-armv7l/wheel/./tomo/protocols
2026-02-10T22:24:04,222   copying build/lib/tomo/protocols/protocol_misalignTS.py -> build/bdist.linux-armv7l/wheel/./tomo/protocols
2026-02-10T22:24:04,225   copying build/lib/tomo/protocols/protocol_compose_TS.py -> build/bdist.linux-armv7l/wheel/./tomo/protocols
2026-02-10T22:24:04,228   copying build/lib/tomo/protocols/protocol_ts_import_coordinates.py -> build/bdist.linux-armv7l/wheel/./tomo/protocols
2026-02-10T22:24:04,230   copying build/lib/tomo/protocols/protocol_ts_estimate_ctf.py -> build/bdist.linux-armv7l/wheel/./tomo/protocols
2026-02-10T22:24:04,233   copying build/lib/tomo/protocols/protocol_ts_from_tomograms.py -> build/bdist.linux-armv7l/wheel/./tomo/protocols
2026-02-10T22:24:04,235   copying build/lib/tomo/protocols/protocol_tomo_apply_tomomask.py -> build/bdist.linux-armv7l/wheel/./tomo/protocols
2026-02-10T22:24:04,238   copying build/lib/tomo/protocols/protocol_split_evenodd_subtomos.py -> build/bdist.linux-armv7l/wheel/./tomo/protocols
2026-02-10T22:24:04,240   copying build/lib/tomo/protocols/protocol_tomo_to_mics.py -> build/bdist.linux-armv7l/wheel/./tomo/protocols
2026-02-10T22:24:04,242   copying build/lib/tomo/protocols/protocol_correct_tilt_offset.py -> build/bdist.linux-armv7l/wheel/./tomo/protocols
2026-02-10T22:24:04,245   copying build/lib/tomo/protocols/protocol_import_ctf.py -> build/bdist.linux-armv7l/wheel/./tomo/protocols
2026-02-10T22:24:04,247   copying build/lib/tomo/protocols/protocol_export_coords.py -> build/bdist.linux-armv7l/wheel/./tomo/protocols
2026-02-10T22:24:04,249   copying build/lib/tomo/protocols/protocol_invert_tilt_angles.py -> build/bdist.linux-armv7l/wheel/./tomo/protocols
2026-02-10T22:24:04,251   copying build/lib/tomo/protocols/protocol_ts_correct_motion.py -> build/bdist.linux-armv7l/wheel/./tomo/protocols
2026-02-10T22:24:04,254   copying build/lib/tomo/protocols/protocol_project_coordinates.py -> build/bdist.linux-armv7l/wheel/./tomo/protocols
2026-02-10T22:24:04,256   copying build/lib/tomo/protocols/protocol_import_coordinates_from_scipion.py -> build/bdist.linux-armv7l/wheel/./tomo/protocols
2026-02-10T22:24:04,258   copying build/lib/tomo/protocols/protocol_extract_coordinates.py -> build/bdist.linux-armv7l/wheel/./tomo/protocols
2026-02-10T22:24:04,261   copying build/lib/tomo/wizards.py -> build/bdist.linux-armv7l/wheel/./tomo
2026-02-10T22:24:04,263   copying build/lib/tomo/protocols.conf -> build/bdist.linux-armv7l/wheel/./tomo
2026-02-10T22:24:04,265   copying build/lib/tomo/icon.png -> build/bdist.linux-armv7l/wheel/./tomo
2026-02-10T22:24:04,268   creating build/bdist.linux-armv7l/wheel/tomo/viewers
2026-02-10T22:24:04,269   copying build/lib/tomo/viewers/viewers_data.py -> build/bdist.linux-armv7l/wheel/./tomo/viewers
2026-02-10T22:24:04,271   copying build/lib/tomo/viewers/__init__.py -> build/bdist.linux-armv7l/wheel/./tomo/viewers
2026-02-10T22:24:04,273   copying build/lib/tomo/viewers/viewer_split_evenodd.py -> build/bdist.linux-armv7l/wheel/./tomo/viewers
2026-02-10T22:24:04,275   creating build/bdist.linux-armv7l/wheel/tomo/viewers/deprecated
2026-02-10T22:24:04,276   copying build/lib/tomo/viewers/deprecated/__init__.py -> build/bdist.linux-armv7l/wheel/./tomo/viewers/deprecated
2026-02-10T22:24:04,278   copying build/lib/tomo/viewers/deprecated/viewer_ctf_tomo_consensus.py -> build/bdist.linux-armv7l/wheel/./tomo/viewers/deprecated
2026-02-10T22:24:04,280   copying build/lib/tomo/viewers/views_tkinter_tree.py -> build/bdist.linux-armv7l/wheel/./tomo/viewers
2026-02-10T22:24:04,284   copying build/lib/tomo/viewers/views.py -> build/bdist.linux-armv7l/wheel/./tomo/viewers
2026-02-10T22:24:04,286   copying build/lib/tomo/objects.py -> build/bdist.linux-armv7l/wheel/./tomo
2026-02-10T22:24:04,290   creating build/bdist.linux-armv7l/wheel/tomo/tests
2026-02-10T22:24:04,291   copying build/lib/tomo/tests/__init__.py -> build/bdist.linux-armv7l/wheel/./tomo/tests
2026-02-10T22:24:04,294   copying build/lib/tomo/tests/test_join_sets.py -> build/bdist.linux-armv7l/wheel/./tomo/tests
2026-02-10T22:24:04,297   copying build/lib/tomo/tests/test_import.py -> build/bdist.linux-armv7l/wheel/./tomo/tests
2026-02-10T22:24:04,300   copying build/lib/tomo/tests/test_tomo_base.py -> build/bdist.linux-armv7l/wheel/./tomo/tests
2026-02-10T22:24:04,303   copying build/lib/tomo/tests/tests_tomo_apply_tomomask.py -> build/bdist.linux-armv7l/wheel/./tomo/tests
2026-02-10T22:24:04,305   copying build/lib/tomo/tests/test_correct_tilt_offset.py -> build/bdist.linux-armv7l/wheel/./tomo/tests
2026-02-10T22:24:04,307   copying build/lib/tomo/tests/test_compose_TS.py -> build/bdist.linux-armv7l/wheel/./tomo/tests
2026-02-10T22:24:04,309   copying build/lib/tomo/tests/test_export.py -> build/bdist.linux-armv7l/wheel/./tomo/tests
2026-02-10T22:24:04,311   copying build/lib/tomo/tests/test_transformations.py -> build/bdist.linux-armv7l/wheel/./tomo/tests
2026-02-10T22:24:04,313   copying build/lib/tomo/tests/test_import_with_pattern.py -> build/bdist.linux-armv7l/wheel/./tomo/tests
2026-02-10T22:24:04,316   copying build/lib/tomo/tests/test_mesh_from_segmentation.py -> build/bdist.linux-armv7l/wheel/./tomo/tests
2026-02-10T22:24:04,318   copying build/lib/tomo/tests/test_ts_from_tomos.py -> build/bdist.linux-armv7l/wheel/./tomo/tests
2026-02-10T22:24:04,320   copying build/lib/tomo/tests/tests_ts_invert_tilt_angles.py -> build/bdist.linux-armv7l/wheel/./tomo/tests
2026-02-10T22:24:04,322   copying build/lib/tomo/tests/test_objects.py -> build/bdist.linux-armv7l/wheel/./tomo/tests
2026-02-10T22:24:04,324   copying build/lib/tomo/tests/test_base_centralized_layer.py -> build/bdist.linux-armv7l/wheel/./tomo/tests
2026-02-10T22:24:04,328   creating build/bdist.linux-armv7l/wheel/tomo/templates
2026-02-10T22:24:04,329   copying build/lib/tomo/templates/202601_Streaming_HIV.json.template -> build/bdist.linux-armv7l/wheel/./tomo/templates
2026-02-10T22:24:04,332   copying build/lib/tomo/templates/tutorial_nonOrientedPicking_ribosome.json.template -> build/bdist.linux-armv7l/wheel/./tomo/templates
2026-02-10T22:24:04,334   copying build/lib/tomo/templates/tutorial_STA_HIV.json.template -> build/bdist.linux-armv7l/wheel/./tomo/templates
2026-02-10T22:24:04,336   copying build/lib/tomo/templates/202601_F_Streaming_HIV.json.template -> build/bdist.linux-armv7l/wheel/./tomo/templates
2026-02-10T22:24:04,339   copying build/lib/tomo/templates/tutorial_STA_CellEnv_Chlamy.json.template -> build/bdist.linux-armv7l/wheel/./tomo/templates
2026-02-10T22:24:04,341   copying build/lib/tomo/templates/202601_Streaming_Chlamy.json.template -> build/bdist.linux-armv7l/wheel/./tomo/templates
2026-02-10T22:24:04,344   copying build/lib/tomo/templates/202601_F_Streaming_Chlamy.json.template -> build/bdist.linux-armv7l/wheel/./tomo/templates
2026-02-10T22:24:04,346   copying build/lib/tomo/templates/tutorial_STA_apoferritin.json.template -> build/bdist.linux-armv7l/wheel/./tomo/templates
2026-02-10T22:24:04,348   copying build/lib/tomo/constants.py -> build/bdist.linux-armv7l/wheel/./tomo
2026-02-10T22:24:04,350   copying build/lib/tomo/utils.py -> build/bdist.linux-armv7l/wheel/./tomo
2026-02-10T22:24:04,353   running install_egg_info
2026-02-10T22:24:04,358   Copying scipion_em_tomo.egg-info to build/bdist.linux-armv7l/wheel/./scipion_em_tomo-3.11.4-py3.11.egg-info
2026-02-10T22:24:04,369   running install_scripts
2026-02-10T22:24:04,381   creating build/bdist.linux-armv7l/wheel/scipion_em_tomo-3.11.4.dist-info/WHEEL
2026-02-10T22:24:04,384   creating '/tmp/pip-wheel-koae4wsq/.tmp-mv_wnw26/scipion_em_tomo-3.11.4-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2026-02-10T22:24:04,393   adding 'scipion_em_tomo-3.11.4.dist-info/licenses/LICENSE'
2026-02-10T22:24:04,395   adding 'tomo/__init__.py'
2026-02-10T22:24:04,397   adding 'tomo/constants.py'
2026-02-10T22:24:04,399   adding 'tomo/icon.png'
2026-02-10T22:24:04,414   adding 'tomo/objects.py'
2026-02-10T22:24:04,417   adding 'tomo/protocols.conf'
2026-02-10T22:24:04,419   adding 'tomo/utils.py'
2026-02-10T22:24:04,421   adding 'tomo/wizards.py'
2026-02-10T22:24:04,423   adding 'tomo/convert/__init__.py'
2026-02-10T22:24:04,425   adding 'tomo/convert/convert.py'
2026-02-10T22:24:04,428   adding 'tomo/convert/mdoc.py'
2026-02-10T22:24:04,431   adding 'tomo/protocols/__init__.py'
2026-02-10T22:24:04,433   adding 'tomo/protocols/protocol_assignTransformationTS.py'
2026-02-10T22:24:04,436   adding 'tomo/protocols/protocol_base.py'
2026-02-10T22:24:04,439   adding 'tomo/protocols/protocol_compose_TS.py'
2026-02-10T22:24:04,441   adding 'tomo/protocols/protocol_correct_tilt_offset.py'
2026-02-10T22:24:04,443   adding 'tomo/protocols/protocol_export_coords.py'
2026-02-10T22:24:04,445   adding 'tomo/protocols/protocol_extract_coordinates.py'
2026-02-10T22:24:04,447   adding 'tomo/protocols/protocol_import_coordinates.py'
2026-02-10T22:24:04,449   adding 'tomo/protocols/protocol_import_coordinates_from_scipion.py'
2026-02-10T22:24:04,451   adding 'tomo/protocols/protocol_import_ctf.py'
2026-02-10T22:24:04,452   adding 'tomo/protocols/protocol_import_subtomograms.py'
2026-02-10T22:24:04,454   adding 'tomo/protocols/protocol_import_tomograms.py'
2026-02-10T22:24:04,456   adding 'tomo/protocols/protocol_import_tomomasks.py'
2026-02-10T22:24:04,458   adding 'tomo/protocols/protocol_invert_tilt_angles.py'
2026-02-10T22:24:04,459   adding 'tomo/protocols/protocol_mask_coordinates.py'
2026-02-10T22:24:04,461   adding 'tomo/protocols/protocol_mesh_from_segmentation.py'
2026-02-10T22:24:04,463   adding 'tomo/protocols/protocol_misalignTS.py'
2026-02-10T22:24:04,465   adding 'tomo/protocols/protocol_particles_to_subtomograms.py'
2026-02-10T22:24:04,467   adding 'tomo/protocols/protocol_project_coordinates.py'
2026-02-10T22:24:04,468   adding 'tomo/protocols/protocol_split_evenodd_subtomos.py'
2026-02-10T22:24:04,470   adding 'tomo/protocols/protocol_tomo_apply_tomomask.py'
2026-02-10T22:24:04,472   adding 'tomo/protocols/protocol_tomo_to_mics.py'
2026-02-10T22:24:04,474   adding 'tomo/protocols/protocol_ts_base.py'
2026-02-10T22:24:04,477   adding 'tomo/protocols/protocol_ts_consensus_alignment.py'
2026-02-10T22:24:04,478   adding 'tomo/protocols/protocol_ts_convert_coords3d.py'
2026-02-10T22:24:04,481   adding 'tomo/protocols/protocol_ts_correct_motion.py'
2026-02-10T22:24:04,483   adding 'tomo/protocols/protocol_ts_estimate_ctf.py'
2026-02-10T22:24:04,485   adding 'tomo/protocols/protocol_ts_from_tomograms.py'
2026-02-10T22:24:04,490   adding 'tomo/protocols/protocol_ts_import.py'
2026-02-10T22:24:04,492   adding 'tomo/protocols/protocol_ts_import_coordinates.py'
2026-02-10T22:24:04,494   adding 'tomo/protocols/deprecated/__init__.py'
2026-02-10T22:24:04,496   adding 'tomo/protocols/deprecated/protocol_alignment_assign.py'
2026-02-10T22:24:04,497   adding 'tomo/protocols/deprecated/protocol_assign_tomo2subtomo.py'
2026-02-10T22:24:04,499   adding 'tomo/protocols/deprecated/protocol_assign_tomo2tomoMask.py'
2026-02-10T22:24:04,501   adding 'tomo/protocols/deprecated/protocol_consensus_classes_subtomo.py'
2026-02-10T22:24:04,503   adding 'tomo/protocols/deprecated/protocol_ctf_consensus.py'
2026-02-10T22:24:04,506   adding 'tomo/protocols/deprecated/protocol_ctf_validate.py'
2026-02-10T22:24:04,507   adding 'tomo/protocols/deprecated/protocol_fit_ellipsoid.py'
2026-02-10T22:24:04,509   adding 'tomo/protocols/deprecated/protocol_landmark_to_2d.py'
2026-02-10T22:24:04,511   adding 'tomo/protocols/deprecated/protocol_rotate_astigmatism.py'
2026-02-10T22:24:04,513   adding 'tomo/templates/202601_F_Streaming_Chlamy.json.template'
2026-02-10T22:24:04,515   adding 'tomo/templates/202601_F_Streaming_HIV.json.template'
2026-02-10T22:24:04,517   adding 'tomo/templates/202601_Streaming_Chlamy.json.template'
2026-02-10T22:24:04,518   adding 'tomo/templates/202601_Streaming_HIV.json.template'
2026-02-10T22:24:04,521   adding 'tomo/templates/tutorial_STA_CellEnv_Chlamy.json.template'
2026-02-10T22:24:04,523   adding 'tomo/templates/tutorial_STA_HIV.json.template'
2026-02-10T22:24:04,525   adding 'tomo/templates/tutorial_STA_apoferritin.json.template'
2026-02-10T22:24:04,527   adding 'tomo/templates/tutorial_nonOrientedPicking_ribosome.json.template'
2026-02-10T22:24:04,530   adding 'tomo/tests/__init__.py'
2026-02-10T22:24:04,538   adding 'tomo/tests/test_base_centralized_layer.py'
2026-02-10T22:24:04,540   adding 'tomo/tests/test_compose_TS.py'
2026-02-10T22:24:04,541   adding 'tomo/tests/test_correct_tilt_offset.py'
2026-02-10T22:24:04,543   adding 'tomo/tests/test_export.py'
2026-02-10T22:24:04,546   adding 'tomo/tests/test_import.py'
2026-02-10T22:24:04,550   adding 'tomo/tests/test_import_with_pattern.py'
2026-02-10T22:24:04,552   adding 'tomo/tests/test_join_sets.py'
2026-02-10T22:24:04,554   adding 'tomo/tests/test_mesh_from_segmentation.py'
2026-02-10T22:24:04,555   adding 'tomo/tests/test_objects.py'
2026-02-10T22:24:04,559   adding 'tomo/tests/test_tomo_base.py'
2026-02-10T22:24:04,561   adding 'tomo/tests/test_transformations.py'
2026-02-10T22:24:04,563   adding 'tomo/tests/test_ts_from_tomos.py'
2026-02-10T22:24:04,564   adding 'tomo/tests/tests_tomo_apply_tomomask.py'
2026-02-10T22:24:04,566   adding 'tomo/tests/tests_ts_invert_tilt_angles.py'
2026-02-10T22:24:04,567   adding 'tomo/viewers/__init__.py'
2026-02-10T22:24:04,569   adding 'tomo/viewers/viewer_split_evenodd.py'
2026-02-10T22:24:04,570   adding 'tomo/viewers/viewers_data.py'
2026-02-10T22:24:04,572   adding 'tomo/viewers/views.py'
2026-02-10T22:24:04,581   adding 'tomo/viewers/views_tkinter_tree.py'
2026-02-10T22:24:04,583   adding 'tomo/viewers/deprecated/__init__.py'
2026-02-10T22:24:04,585   adding 'tomo/viewers/deprecated/viewer_ctf_tomo_consensus.py'
2026-02-10T22:24:04,586   adding 'scipion_em_tomo-3.11.4.dist-info/METADATA'
2026-02-10T22:24:04,587   adding 'scipion_em_tomo-3.11.4.dist-info/WHEEL'
2026-02-10T22:24:04,588   adding 'scipion_em_tomo-3.11.4.dist-info/entry_points.txt'
2026-02-10T22:24:04,589   adding 'scipion_em_tomo-3.11.4.dist-info/top_level.txt'
2026-02-10T22:24:04,591   adding 'scipion_em_tomo-3.11.4.dist-info/RECORD'
2026-02-10T22:24:04,596   removing build/bdist.linux-armv7l/wheel
2026-02-10T22:24:04,717   Building wheel for scipion-em-tomo (pyproject.toml): finished with status 'done'
2026-02-10T22:24:04,727   Created wheel for scipion-em-tomo: filename=scipion_em_tomo-3.11.4-py3-none-any.whl size=318162 sha256=6294874759b9776f0946e0792373601a350c223393bfab0043e60954b50b307d
2026-02-10T22:24:04,728   Stored in directory: /tmp/pip-ephem-wheel-cache-i9e91n5v/wheels/27/a2/57/58a8368b309c46fccdb0c4eacab04d9a61a6181ac1daa51b3e
2026-02-10T22:24:04,741 Successfully built scipion-em-tomo
2026-02-10T22:24:04,753 Removed build tracker: '/tmp/pip-build-tracker-ha13c2kp'