2026-02-11T02:35:24,816 Created temporary directory: /tmp/pip-ephem-wheel-cache-7fbk4cjb 2026-02-11T02:35:24,818 Created temporary directory: /tmp/pip-build-tracker-81veq7_c 2026-02-11T02:35:24,818 Initialized build tracking at /tmp/pip-build-tracker-81veq7_c 2026-02-11T02:35:24,819 Created build tracker: /tmp/pip-build-tracker-81veq7_c 2026-02-11T02:35:24,819 Entered build tracker: /tmp/pip-build-tracker-81veq7_c 2026-02-11T02:35:24,820 Created temporary directory: /tmp/pip-wheel-xat05yp7 2026-02-11T02:35:24,823 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-02-11T02:35:24,826 Created temporary directory: /tmp/pip-ephem-wheel-cache-ak4fsun5 2026-02-11T02:35:24,847 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-02-11T02:35:24,851 2 location(s) to search for versions of mmcif-utils: 2026-02-11T02:35:24,851 * https://pypi.org/simple/mmcif-utils/ 2026-02-11T02:35:24,851 * https://www.piwheels.org/simple/mmcif-utils/ 2026-02-11T02:35:24,851 Fetching project page and analyzing links: https://pypi.org/simple/mmcif-utils/ 2026-02-11T02:35:24,852 Getting page https://pypi.org/simple/mmcif-utils/ 2026-02-11T02:35:24,854 Found index url https://pypi.org/simple 2026-02-11T02:35:25,064 Fetched page https://pypi.org/simple/mmcif-utils/ as application/vnd.pypi.simple.v1+json 2026-02-11T02:35:25,070 Found link https://files.pythonhosted.org/packages/f3/80/dff5ede1197bfbb9d50741dc973e052961d3c4457c152b13c5349fb59855/mmcif.utils-0.10.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.10 2026-02-11T02:35:25,070 Found link https://files.pythonhosted.org/packages/c7/62/6f15b693673283c3b68c35435e0df4d1b9d98b73a5be5ebabf1f2c1b06f1/mmcif.utils-0.11.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.11 2026-02-11T02:35:25,071 Found link https://files.pythonhosted.org/packages/41/61/30428632dbce0f248e713ec65284af17cbe240cfb1cd3216cbd89bfcd92f/mmcif.utils-0.12.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.12 2026-02-11T02:35:25,072 Skipping link: No binaries permitted for mmcif-utils: https://files.pythonhosted.org/packages/a3/d6/13917debe76d604fe8b6227079b193eec57275f17a914351b4324f0b5bd9/mmcif.utils-0.13-py2.py3-none-any.whl (from https://pypi.org/simple/mmcif-utils/) 2026-02-11T02:35:25,073 Found link https://files.pythonhosted.org/packages/31/85/65b76a958d6738629ca31fc2f6271a71247ba8177c18ccbc68c14c34fe62/mmcif.utils-0.13.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.13 2026-02-11T02:35:25,074 Skipping link: No binaries permitted for mmcif-utils: https://files.pythonhosted.org/packages/d7/b4/15b4f49d3c00b9e2235ac12299d45ad3ac52d907eaf3a18f941b86b89a33/mmcif.utils-0.14-py2.py3-none-any.whl (from https://pypi.org/simple/mmcif-utils/) 2026-02-11T02:35:25,074 Found link https://files.pythonhosted.org/packages/58/ff/5cd18cad301818120644d408649b210117951378487a195afa570971d3c9/mmcif.utils-0.14.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.14 2026-02-11T02:35:25,075 Found link https://files.pythonhosted.org/packages/09/79/8e5e1a5d01b864d56266f6a327f3bc8822033d9077d3d4f276334b4d341a/mmcif.utils-0.20.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.20 2026-02-11T02:35:25,076 Found link https://files.pythonhosted.org/packages/3d/9c/104dce7f143aecf8eac24ef6cee95dee002f62388777f8ac9d69f08cabde/mmcif.utils-0.21.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.21 2026-02-11T02:35:25,076 Found link https://files.pythonhosted.org/packages/da/df/92ac16434b0cac9df602f0e15172e5b76f45a012d7bc40b3f69703faa459/mmcif.utils-0.22.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.22 2026-02-11T02:35:25,077 Found link https://files.pythonhosted.org/packages/19/67/1d6c70f129b2a04bfde6287bf3303463d80061f93ac967d64a2685a37401/mmcif.utils-0.24.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.24 2026-02-11T02:35:25,078 Skipping link: No binaries permitted for mmcif-utils: https://files.pythonhosted.org/packages/95/89/9d84de63b25907a20ada59f5a91988e3dc63fb083a15ff9c2791a6ae7e63/mmcif.utils-0.25-py2.py3-none-any.whl (from https://pypi.org/simple/mmcif-utils/) 2026-02-11T02:35:25,079 Found link https://files.pythonhosted.org/packages/25/cf/493c53bb71f23b7a668c4ec0c3af4d43596dca38305102cd5ec9f800aae7/mmcif.utils-0.25.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.25 2026-02-11T02:35:25,079 Found link https://files.pythonhosted.org/packages/19/23/e8cc30c5e8a38f3c3d1c238d68bf341b368151f7183b6d5a1c13f1c5f834/mmcif.utils-0.26.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.26 2026-02-11T02:35:25,080 Skipping link: No binaries permitted for mmcif-utils: https://files.pythonhosted.org/packages/86/28/57d4099a28fb5f3325d795c10c9230fd2757bca8e44c5cf0ba87f521d02c/mmcif.utils-0.27-py2.py3-none-any.whl (from https://pypi.org/simple/mmcif-utils/) 2026-02-11T02:35:25,080 Found link https://files.pythonhosted.org/packages/a7/97/019203744d032eff304ed31b60c1cf8b51d717adf8c66d1dc5712a9ab8b9/mmcif.utils-0.27.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.27 2026-02-11T02:35:25,081 Found link https://files.pythonhosted.org/packages/c1/3f/f76cf5e6fa8f2ffe6c87871b01032bd6ae7cebab8ed4f9ae5984b1c03ddf/mmcif.utils-0.28.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.28 2026-02-11T02:35:25,082 Skipping link: No binaries permitted for mmcif-utils: https://files.pythonhosted.org/packages/fb/6c/f61962b30c105bb8e501ee3325bb9f9082c6dc0dc4f067a600eb41d5962b/mmcif.utils-0.29-py2.py3-none-any.whl (from https://pypi.org/simple/mmcif-utils/) 2026-02-11T02:35:25,082 Found link https://files.pythonhosted.org/packages/b9/c0/476c5933410f9b89a47034d8044ab6d6d829f74e527c67d9bed2b1c1986f/mmcif_utils-0.29.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.29 2026-02-11T02:35:25,083 Found link https://files.pythonhosted.org/packages/02/08/b8d89ba746d849dee677a7b2a0418c50e5e9cbc49d2643520fa6f6eb0084/mmcif.utils-0.30.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.30 2026-02-11T02:35:25,084 Found link https://files.pythonhosted.org/packages/22/c9/e2126ee861c733c130a7064083ead247fad3cf679ab915b11249680397ab/mmcif_utils-0.30.1.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.30.1 2026-02-11T02:35:25,085 Skipping link: No binaries permitted for mmcif-utils: https://files.pythonhosted.org/packages/e0/ff/a81f5791a5f99918f11480fe58b86bb34fc8cc50a8950449149a53fc3fc7/mmcif.utils-0.31-py2.py3-none-any.whl (from https://pypi.org/simple/mmcif-utils/) 2026-02-11T02:35:25,086 Found link https://files.pythonhosted.org/packages/d4/b4/9e1fbf9b169c55cd796a2834fe42ef2272562df55f69faa15069798ac55d/mmcif_utils-0.31.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.31 2026-02-11T02:35:25,086 Skipping link: No binaries permitted for mmcif-utils: https://files.pythonhosted.org/packages/fd/e2/b2729a97b0d855f83a7127d38d55da09dc4187c2e5ad8121708634d8939d/mmcif_utils-0.32-py2.py3-none-any.whl (from https://pypi.org/simple/mmcif-utils/) 2026-02-11T02:35:25,087 Found link https://files.pythonhosted.org/packages/ec/a8/6dedc1546a71b9ee6225c4e0be4debaa7915f5bb852b2246fcf4092a1c2c/mmcif_utils-0.32.tar.gz (from https://pypi.org/simple/mmcif-utils/), version: 0.32 2026-02-11T02:35:25,088 Fetching project page and analyzing links: https://www.piwheels.org/simple/mmcif-utils/ 2026-02-11T02:35:25,088 Getting page https://www.piwheels.org/simple/mmcif-utils/ 2026-02-11T02:35:25,090 Found index url https://www.piwheels.org/simple 2026-02-11T02:35:25,247 Fetched page https://www.piwheels.org/simple/mmcif-utils/ as text/html 2026-02-11T02:35:25,253 Skipping link: No binaries permitted for mmcif-utils: https://archive1.piwheels.org/simple/mmcif-utils/mmcif.utils-0.31-py2.py3-none-any.whl#sha256=03b99d3d4f542baf5f2504e8353cb1df81b73c225a26b16409330a64d1e547dc (from https://www.piwheels.org/simple/mmcif-utils/) 2026-02-11T02:35:25,254 Skipping link: No binaries permitted for mmcif-utils: https://archive1.piwheels.org/simple/mmcif-utils/mmcif.utils-0.30.1-py2.py3-none-any.whl#sha256=17b192d5df5cfd53ca76f91f474446f0dc297a35cc44181820fca0bf0e617dde (from https://www.piwheels.org/simple/mmcif-utils/) 2026-02-11T02:35:25,255 Skipping link: No binaries permitted for mmcif-utils: 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hashes to check 1 links for project 'mmcif-utils': discarding no candidates 2026-02-11T02:35:25,302 Collecting mmcif-utils==0.32 2026-02-11T02:35:25,304 Created temporary directory: /tmp/pip-unpack-1bexpvvk 2026-02-11T02:35:25,513 Downloading mmcif_utils-0.32.tar.gz (91 kB) 2026-02-11T02:35:25,717 Added mmcif-utils==0.32 from https://files.pythonhosted.org/packages/ec/a8/6dedc1546a71b9ee6225c4e0be4debaa7915f5bb852b2246fcf4092a1c2c/mmcif_utils-0.32.tar.gz to build tracker '/tmp/pip-build-tracker-81veq7_c' 2026-02-11T02:35:25,719 Running setup.py (path:/tmp/pip-wheel-xat05yp7/mmcif-utils_4fca9d98135f46eb90c85ef8d9711e61/setup.py) egg_info for package mmcif-utils 2026-02-11T02:35:25,720 Created temporary directory: /tmp/pip-pip-egg-info-aiot_bcc 2026-02-11T02:35:25,720 Preparing metadata (setup.py): started 2026-02-11T02:35:25,721 Running command python setup.py egg_info 2026-02-11T02:35:26,256 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:599: SetuptoolsDeprecationWarning: Invalid dash-separated key 'description-file' in 'metadata' (setup.cfg), please use the underscore name 'description_file' instead. 2026-02-11T02:35:26,256 !! 2026-02-11T02:35:26,258 ******************************************************************************** 2026-02-11T02:35:26,258 Usage of dash-separated 'description-file' will not be supported in future 2026-02-11T02:35:26,259 versions. Please use the underscore name 'description_file' instead. 2026-02-11T02:35:26,260 Available configuration options are listed in: 2026-02-11T02:35:26,261 https://setuptools.pypa.io/en/latest/userguide/declarative_config.html 2026-02-11T02:35:26,262 By 2026-Mar-03, you need to update your project and remove deprecated calls 2026-02-11T02:35:26,263 or your builds will no longer be supported. 2026-02-11T02:35:26,264 See https://github.com/pypa/setuptools/discussions/5011 for details. 2026-02-11T02:35:26,265 ******************************************************************************** 2026-02-11T02:35:26,266 !! 2026-02-11T02:35:26,266 opt = self._enforce_underscore(opt, section) 2026-02-11T02:35:26,289 Warning: 'classifiers' should be a list, got type 'tuple' 2026-02-11T02:35:26,291 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py:287: UserWarning: Unknown distribution option: 'test_suite' 2026-02-11T02:35:26,292 warnings.warn(msg) 2026-02-11T02:35:26,292 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py:287: UserWarning: Unknown distribution option: 'tests_require' 2026-02-11T02:35:26,293 warnings.warn(msg) 2026-02-11T02:35:26,601 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:599: SetuptoolsDeprecationWarning: Invalid dash-separated key 'description-file' in 'metadata' (setup.cfg), please use the underscore name 'description_file' instead. 2026-02-11T02:35:26,602 !! 2026-02-11T02:35:26,603 ******************************************************************************** 2026-02-11T02:35:26,604 Usage of dash-separated 'description-file' will not be supported in future 2026-02-11T02:35:26,604 versions. Please use the underscore name 'description_file' instead. 2026-02-11T02:35:26,605 (Affected: mmcif.utils). 2026-02-11T02:35:26,606 Available configuration options are listed in: 2026-02-11T02:35:26,607 https://setuptools.pypa.io/en/latest/userguide/declarative_config.html 2026-02-11T02:35:26,608 By 2026-Mar-03, you need to update your project and remove deprecated calls 2026-02-11T02:35:26,608 or your builds will no longer be supported. 2026-02-11T02:35:26,609 See https://github.com/pypa/setuptools/discussions/5011 for details. 2026-02-11T02:35:26,609 ******************************************************************************** 2026-02-11T02:35:26,610 !! 2026-02-11T02:35:26,611 opt = self._enforce_underscore(opt, section) 2026-02-11T02:35:26,611 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-02-11T02:35:26,612 !! 2026-02-11T02:35:26,613 ******************************************************************************** 2026-02-11T02:35:26,613 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-02-11T02:35:26,614 License :: OSI Approved :: Apache Software License 2026-02-11T02:35:26,615 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-02-11T02:35:26,616 ******************************************************************************** 2026-02-11T02:35:26,617 !! 2026-02-11T02:35:26,617 self._finalize_license_expression() 2026-02-11T02:35:26,634 running egg_info 2026-02-11T02:35:26,660 creating /tmp/pip-pip-egg-info-aiot_bcc/mmcif.utils.egg-info 2026-02-11T02:35:26,661 writing /tmp/pip-pip-egg-info-aiot_bcc/mmcif.utils.egg-info/PKG-INFO 2026-02-11T02:35:26,665 writing dependency_links to /tmp/pip-pip-egg-info-aiot_bcc/mmcif.utils.egg-info/dependency_links.txt 2026-02-11T02:35:26,667 writing requirements to /tmp/pip-pip-egg-info-aiot_bcc/mmcif.utils.egg-info/requires.txt 2026-02-11T02:35:26,668 writing top-level names to /tmp/pip-pip-egg-info-aiot_bcc/mmcif.utils.egg-info/top_level.txt 2026-02-11T02:35:26,670 writing manifest file '/tmp/pip-pip-egg-info-aiot_bcc/mmcif.utils.egg-info/SOURCES.txt' 2026-02-11T02:35:26,777 reading manifest file '/tmp/pip-pip-egg-info-aiot_bcc/mmcif.utils.egg-info/SOURCES.txt' 2026-02-11T02:35:26,778 reading manifest template 'MANIFEST.in' 2026-02-11T02:35:26,780 warning: no previously-included files matching '*' found under directory 'mmcif_utils/tests' 2026-02-11T02:35:26,780 adding license file 'LICENSE' 2026-02-11T02:35:26,784 writing manifest file '/tmp/pip-pip-egg-info-aiot_bcc/mmcif.utils.egg-info/SOURCES.txt' 2026-02-11T02:35:26,892 Preparing metadata (setup.py): finished with status 'done' 2026-02-11T02:35:26,895 Source in /tmp/pip-wheel-xat05yp7/mmcif-utils_4fca9d98135f46eb90c85ef8d9711e61 has version 0.32, which satisfies requirement mmcif-utils==0.32 from https://files.pythonhosted.org/packages/ec/a8/6dedc1546a71b9ee6225c4e0be4debaa7915f5bb852b2246fcf4092a1c2c/mmcif_utils-0.32.tar.gz 2026-02-11T02:35:26,897 Removed mmcif-utils==0.32 from https://files.pythonhosted.org/packages/ec/a8/6dedc1546a71b9ee6225c4e0be4debaa7915f5bb852b2246fcf4092a1c2c/mmcif_utils-0.32.tar.gz from build tracker '/tmp/pip-build-tracker-81veq7_c' 2026-02-11T02:35:26,901 Created temporary directory: /tmp/pip-unpack-mvsn0_ct 2026-02-11T02:35:26,901 Building wheels for collected packages: mmcif-utils 2026-02-11T02:35:26,906 Created temporary directory: /tmp/pip-wheel-f2rzme8r 2026-02-11T02:35:26,906 Building wheel for mmcif-utils (setup.py): started 2026-02-11T02:35:26,908 Destination directory: /tmp/pip-wheel-f2rzme8r 2026-02-11T02:35:26,908 Running command python setup.py bdist_wheel 2026-02-11T02:35:27,420 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:599: SetuptoolsDeprecationWarning: Invalid dash-separated key 'description-file' in 'metadata' (setup.cfg), please use the underscore name 'description_file' instead. 2026-02-11T02:35:27,421 !! 2026-02-11T02:35:27,422 ******************************************************************************** 2026-02-11T02:35:27,422 Usage of dash-separated 'description-file' will not be supported in future 2026-02-11T02:35:27,423 versions. Please use the underscore name 'description_file' instead. 2026-02-11T02:35:27,424 Available configuration options are listed in: 2026-02-11T02:35:27,425 https://setuptools.pypa.io/en/latest/userguide/declarative_config.html 2026-02-11T02:35:27,426 By 2026-Mar-03, you need to update your project and remove deprecated calls 2026-02-11T02:35:27,426 or your builds will no longer be supported. 2026-02-11T02:35:27,427 See https://github.com/pypa/setuptools/discussions/5011 for details. 2026-02-11T02:35:27,428 ******************************************************************************** 2026-02-11T02:35:27,429 !! 2026-02-11T02:35:27,429 opt = self._enforce_underscore(opt, section) 2026-02-11T02:35:27,452 Warning: 'classifiers' should be a list, got type 'tuple' 2026-02-11T02:35:27,453 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py:287: UserWarning: Unknown distribution option: 'test_suite' 2026-02-11T02:35:27,454 warnings.warn(msg) 2026-02-11T02:35:27,454 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py:287: UserWarning: Unknown distribution option: 'tests_require' 2026-02-11T02:35:27,455 warnings.warn(msg) 2026-02-11T02:35:27,756 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:599: SetuptoolsDeprecationWarning: Invalid dash-separated key 'description-file' in 'metadata' (setup.cfg), please use the underscore name 'description_file' instead. 2026-02-11T02:35:27,756 !! 2026-02-11T02:35:27,758 ******************************************************************************** 2026-02-11T02:35:27,758 Usage of dash-separated 'description-file' will not be supported in future 2026-02-11T02:35:27,759 versions. Please use the underscore name 'description_file' instead. 2026-02-11T02:35:27,759 (Affected: mmcif.utils). 2026-02-11T02:35:27,761 Available configuration options are listed in: 2026-02-11T02:35:27,761 https://setuptools.pypa.io/en/latest/userguide/declarative_config.html 2026-02-11T02:35:27,762 By 2026-Mar-03, you need to update your project and remove deprecated calls 2026-02-11T02:35:27,763 or your builds will no longer be supported. 2026-02-11T02:35:27,764 See https://github.com/pypa/setuptools/discussions/5011 for details. 2026-02-11T02:35:27,765 ******************************************************************************** 2026-02-11T02:35:27,766 !! 2026-02-11T02:35:27,767 opt = self._enforce_underscore(opt, section) 2026-02-11T02:35:27,767 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-02-11T02:35:27,768 !! 2026-02-11T02:35:27,769 ******************************************************************************** 2026-02-11T02:35:27,770 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-02-11T02:35:27,771 License :: OSI Approved :: Apache Software License 2026-02-11T02:35:27,772 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-02-11T02:35:27,773 ******************************************************************************** 2026-02-11T02:35:27,774 !! 2026-02-11T02:35:27,774 self._finalize_license_expression() 2026-02-11T02:35:27,775 running bdist_wheel 2026-02-11T02:35:27,841 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:119: SetuptoolsDeprecationWarning: bdist_wheel.universal is deprecated 2026-02-11T02:35:27,842 !! 2026-02-11T02:35:27,843 ******************************************************************************** 2026-02-11T02:35:27,844 With Python 2.7 end-of-life, support for building universal wheels 2026-02-11T02:35:27,844 (i.e., wheels that support both Python 2 and Python 3) 2026-02-11T02:35:27,845 is being obviated. 2026-02-11T02:35:27,845 Please discontinue using this option, or if you still need it, 2026-02-11T02:35:27,846 file an issue with pypa/setuptools describing your use case. 2026-02-11T02:35:27,847 This deprecation is overdue, please update your project and remove deprecated 2026-02-11T02:35:27,847 calls to avoid build errors in the future. 2026-02-11T02:35:27,848 ******************************************************************************** 2026-02-11T02:35:27,849 !! 2026-02-11T02:35:27,849 self.finalize_options() 2026-02-11T02:35:27,896 running build 2026-02-11T02:35:27,896 running build_py 2026-02-11T02:35:27,928 creating build/lib/mmcif_utils 2026-02-11T02:35:27,931 copying mmcif_utils/__init__.py -> build/lib/mmcif_utils 2026-02-11T02:35:27,933 creating build/lib/mmcif_utils/style 2026-02-11T02:35:27,934 copying mmcif_utils/style/PdbxXrayExpReportCategoryStyle.py -> build/lib/mmcif_utils/style 2026-02-11T02:35:27,937 copying mmcif_utils/style/PdbxGeometryReportCategoryStyle.py -> build/lib/mmcif_utils/style 2026-02-11T02:35:27,939 copying mmcif_utils/style/ChemCompCategoryStyle.py -> build/lib/mmcif_utils/style 2026-02-11T02:35:27,941 copying mmcif_utils/style/PdbxReportCategoryStyle.py -> build/lib/mmcif_utils/style 2026-02-11T02:35:27,945 copying mmcif_utils/style/PdbxStyleIoUtil.py -> build/lib/mmcif_utils/style 2026-02-11T02:35:27,948 copying mmcif_utils/style/PrdCategoryStyle.py -> build/lib/mmcif_utils/style 2026-02-11T02:35:27,951 copying mmcif_utils/style/make-style-from-item-list.py -> build/lib/mmcif_utils/style 2026-02-11T02:35:27,953 copying mmcif_utils/style/__init__.py -> build/lib/mmcif_utils/style 2026-02-11T02:35:27,955 copying mmcif_utils/style/PdbxMessageCategoryStyle.py -> build/lib/mmcif_utils/style 2026-02-11T02:35:27,957 copying mmcif_utils/style/PdbxEmExtensionCategoryStyle.py -> build/lib/mmcif_utils/style 2026-02-11T02:35:27,960 copying mmcif_utils/style/ChemCompCategoryStyleWithOutStndAtom.py -> build/lib/mmcif_utils/style 2026-02-11T02:35:27,963 copying mmcif_utils/style/PdbxCategoryStyleBase.py -> build/lib/mmcif_utils/style 2026-02-11T02:35:27,965 copying mmcif_utils/style/PdbxLocalMapIndexCategoryStyle.py -> build/lib/mmcif_utils/style 2026-02-11T02:35:27,967 copying mmcif_utils/style/ChemCompModelCategoryStyle.py -> build/lib/mmcif_utils/style 2026-02-11T02:35:27,969 copying mmcif_utils/style/PdbxEntryInfoCategoryStyle.py -> build/lib/mmcif_utils/style 2026-02-11T02:35:27,972 copying mmcif_utils/style/PdbxItemMappingCategoryStyle.py -> build/lib/mmcif_utils/style 2026-02-11T02:35:27,974 copying mmcif_utils/style/PdbxStatusHistoryCategoryStyle.py -> build/lib/mmcif_utils/style 2026-02-11T02:35:27,976 creating build/lib/mmcif_utils/trans 2026-02-11T02:35:27,977 copying mmcif_utils/trans/DictionaryMapperIo.py -> build/lib/mmcif_utils/trans 2026-02-11T02:35:27,979 copying mmcif_utils/trans/__init__.py -> build/lib/mmcif_utils/trans 2026-02-11T02:35:27,981 copying mmcif_utils/trans/DictionaryMapper.py -> build/lib/mmcif_utils/trans 2026-02-11T02:35:27,983 copying mmcif_utils/trans/InstanceMapper.py -> build/lib/mmcif_utils/trans 2026-02-11T02:35:27,986 copying mmcif_utils/trans/FilterCif.py -> build/lib/mmcif_utils/trans 2026-02-11T02:35:27,989 creating build/lib/mmcif_utils/pdbx 2026-02-11T02:35:27,990 copying mmcif_utils/pdbx/__init__.py -> build/lib/mmcif_utils/pdbx 2026-02-11T02:35:27,991 copying mmcif_utils/pdbx/PdbxIo.py -> build/lib/mmcif_utils/pdbx 2026-02-11T02:35:27,995 creating build/lib/mmcif_utils/persist 2026-02-11T02:35:27,996 copying mmcif_utils/persist/PdbxCoreIoAdapter.py -> build/lib/mmcif_utils/persist 2026-02-11T02:35:27,999 copying mmcif_utils/persist/PdbxDictionaryInfo.py -> build/lib/mmcif_utils/persist 2026-02-11T02:35:28,003 copying mmcif_utils/persist/__init__.py -> build/lib/mmcif_utils/persist 2026-02-11T02:35:28,004 copying mmcif_utils/persist/PdbxPyIoAdapter.py -> build/lib/mmcif_utils/persist 2026-02-11T02:35:28,006 copying mmcif_utils/persist/PdbxPersist.py -> build/lib/mmcif_utils/persist 2026-02-11T02:35:28,009 copying mmcif_utils/persist/LockFile.py -> build/lib/mmcif_utils/persist 2026-02-11T02:35:28,012 creating build/lib/mmcif_utils/bird 2026-02-11T02:35:28,013 copying mmcif_utils/bird/PdbxBirdIndex.py -> build/lib/mmcif_utils/bird 2026-02-11T02:35:28,015 copying mmcif_utils/bird/PdbxPrdCcIo.py -> build/lib/mmcif_utils/bird 2026-02-11T02:35:28,017 copying mmcif_utils/bird/PdbxFamilyIo.py -> build/lib/mmcif_utils/bird 2026-02-11T02:35:28,019 copying mmcif_utils/bird/__init__.py -> build/lib/mmcif_utils/bird 2026-02-11T02:35:28,021 copying mmcif_utils/bird/PdbxPrdIo.py -> build/lib/mmcif_utils/bird 2026-02-11T02:35:28,023 copying mmcif_utils/bird/PdbxPrdUtils.py -> build/lib/mmcif_utils/bird 2026-02-11T02:35:28,026 copying mmcif_utils/bird/PdbxPrd.py -> build/lib/mmcif_utils/bird 2026-02-11T02:35:28,029 creating build/lib/mmcif_utils/pdb 2026-02-11T02:35:28,030 copying mmcif_utils/pdb/PdbxConnectTests.py -> build/lib/mmcif_utils/pdb 2026-02-11T02:35:28,032 copying mmcif_utils/pdb/PdbxAnnFeature.py -> build/lib/mmcif_utils/pdb 2026-02-11T02:35:28,034 copying mmcif_utils/pdb/__init__.py -> build/lib/mmcif_utils/pdb 2026-02-11T02:35:28,036 copying mmcif_utils/pdb/PdbxVersion.py -> build/lib/mmcif_utils/pdb 2026-02-11T02:35:28,038 copying mmcif_utils/pdb/PdbxConnect.py -> build/lib/mmcif_utils/pdb 2026-02-11T02:35:28,041 copying mmcif_utils/pdb/PdbxAtomSite.py -> build/lib/mmcif_utils/pdb 2026-02-11T02:35:28,044 creating build/lib/mmcif_utils/inventory 2026-02-11T02:35:28,045 copying mmcif_utils/inventory/InventoryIoBatchRunner.py -> build/lib/mmcif_utils/inventory 2026-02-11T02:35:28,047 copying mmcif_utils/inventory/__init__.py -> build/lib/mmcif_utils/inventory 2026-02-11T02:35:28,049 copying mmcif_utils/inventory/InventoryIo.py -> build/lib/mmcif_utils/inventory 2026-02-11T02:35:28,051 creating build/lib/mmcif_utils/chemcomp 2026-02-11T02:35:28,052 copying mmcif_utils/chemcomp/PdbxChemComp.py -> build/lib/mmcif_utils/chemcomp 2026-02-11T02:35:28,055 copying mmcif_utils/chemcomp/__init__.py -> build/lib/mmcif_utils/chemcomp 2026-02-11T02:35:28,056 copying mmcif_utils/chemcomp/PdbxChemCompModel.py -> build/lib/mmcif_utils/chemcomp 2026-02-11T02:35:28,059 copying mmcif_utils/chemcomp/PdbxChemCompModelIo.py -> build/lib/mmcif_utils/chemcomp 2026-02-11T02:35:28,060 copying mmcif_utils/chemcomp/PdbxChemCompIo.py -> build/lib/mmcif_utils/chemcomp 2026-02-11T02:35:28,063 copying mmcif_utils/chemcomp/PdbxChemCompUtils.py -> build/lib/mmcif_utils/chemcomp 2026-02-11T02:35:28,066 creating build/lib/mmcif_utils/message 2026-02-11T02:35:28,067 copying mmcif_utils/message/PdbxMessageIo.py -> build/lib/mmcif_utils/message 2026-02-11T02:35:28,069 copying mmcif_utils/message/__init__.py -> build/lib/mmcif_utils/message 2026-02-11T02:35:28,071 copying mmcif_utils/message/PdbxMessage.py -> build/lib/mmcif_utils/message 2026-02-11T02:35:28,074 creating build/lib/mmcif_utils/bird/cl 2026-02-11T02:35:28,075 copying mmcif_utils/bird/cl/PdbxPrdExec.py -> build/lib/mmcif_utils/bird/cl 2026-02-11T02:35:28,078 copying mmcif_utils/bird/cl/__init__.py -> build/lib/mmcif_utils/bird/cl 2026-02-11T02:35:28,125 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2026-02-11T02:35:28,126 !! 2026-02-11T02:35:28,127 ******************************************************************************** 2026-02-11T02:35:28,128 Please avoid running ``setup.py`` directly. 2026-02-11T02:35:28,129 Instead, use pypa/build, pypa/installer or other 2026-02-11T02:35:28,129 standards-based tools. 2026-02-11T02:35:28,131 This deprecation is overdue, please update your project and remove deprecated 2026-02-11T02:35:28,131 calls to avoid build errors in the future. 2026-02-11T02:35:28,132 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2026-02-11T02:35:28,132 ******************************************************************************** 2026-02-11T02:35:28,133 !! 2026-02-11T02:35:28,134 self.initialize_options() 2026-02-11T02:35:28,155 installing to build/bdist.linux-armv7l/wheel 2026-02-11T02:35:28,156 running install 2026-02-11T02:35:28,180 running install_lib 2026-02-11T02:35:28,206 creating build/bdist.linux-armv7l/wheel 2026-02-11T02:35:28,208 creating build/bdist.linux-armv7l/wheel/mmcif_utils 2026-02-11T02:35:28,210 creating build/bdist.linux-armv7l/wheel/mmcif_utils/style 2026-02-11T02:35:28,211 copying build/lib/mmcif_utils/style/PdbxXrayExpReportCategoryStyle.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/style 2026-02-11T02:35:28,214 copying build/lib/mmcif_utils/style/PdbxGeometryReportCategoryStyle.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/style 2026-02-11T02:35:28,216 copying build/lib/mmcif_utils/style/ChemCompCategoryStyle.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/style 2026-02-11T02:35:28,219 copying build/lib/mmcif_utils/style/PdbxReportCategoryStyle.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/style 2026-02-11T02:35:28,223 copying build/lib/mmcif_utils/style/PdbxStyleIoUtil.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/style 2026-02-11T02:35:28,226 copying build/lib/mmcif_utils/style/PrdCategoryStyle.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/style 2026-02-11T02:35:28,228 copying build/lib/mmcif_utils/style/make-style-from-item-list.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/style 2026-02-11T02:35:28,230 copying build/lib/mmcif_utils/style/__init__.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/style 2026-02-11T02:35:28,232 copying build/lib/mmcif_utils/style/PdbxMessageCategoryStyle.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/style 2026-02-11T02:35:28,234 copying build/lib/mmcif_utils/style/PdbxEmExtensionCategoryStyle.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/style 2026-02-11T02:35:28,237 copying build/lib/mmcif_utils/style/ChemCompCategoryStyleWithOutStndAtom.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/style 2026-02-11T02:35:28,240 copying build/lib/mmcif_utils/style/PdbxCategoryStyleBase.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/style 2026-02-11T02:35:28,242 copying build/lib/mmcif_utils/style/PdbxLocalMapIndexCategoryStyle.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/style 2026-02-11T02:35:28,244 copying build/lib/mmcif_utils/style/ChemCompModelCategoryStyle.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/style 2026-02-11T02:35:28,246 copying build/lib/mmcif_utils/style/PdbxEntryInfoCategoryStyle.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/style 2026-02-11T02:35:28,248 copying build/lib/mmcif_utils/style/PdbxItemMappingCategoryStyle.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/style 2026-02-11T02:35:28,250 copying build/lib/mmcif_utils/style/PdbxStatusHistoryCategoryStyle.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/style 2026-02-11T02:35:28,253 creating build/bdist.linux-armv7l/wheel/mmcif_utils/trans 2026-02-11T02:35:28,254 copying build/lib/mmcif_utils/trans/DictionaryMapperIo.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/trans 2026-02-11T02:35:28,256 copying build/lib/mmcif_utils/trans/__init__.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/trans 2026-02-11T02:35:28,258 copying build/lib/mmcif_utils/trans/DictionaryMapper.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/trans 2026-02-11T02:35:28,260 copying build/lib/mmcif_utils/trans/InstanceMapper.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/trans 2026-02-11T02:35:28,263 copying build/lib/mmcif_utils/trans/FilterCif.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/trans 2026-02-11T02:35:28,266 creating build/bdist.linux-armv7l/wheel/mmcif_utils/pdbx 2026-02-11T02:35:28,267 copying build/lib/mmcif_utils/pdbx/__init__.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/pdbx 2026-02-11T02:35:28,268 copying build/lib/mmcif_utils/pdbx/PdbxIo.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/pdbx 2026-02-11T02:35:28,272 creating build/bdist.linux-armv7l/wheel/mmcif_utils/persist 2026-02-11T02:35:28,273 copying build/lib/mmcif_utils/persist/PdbxCoreIoAdapter.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/persist 2026-02-11T02:35:28,275 copying build/lib/mmcif_utils/persist/PdbxDictionaryInfo.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/persist 2026-02-11T02:35:28,279 copying build/lib/mmcif_utils/persist/__init__.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/persist 2026-02-11T02:35:28,281 copying build/lib/mmcif_utils/persist/PdbxPyIoAdapter.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/persist 2026-02-11T02:35:28,283 copying build/lib/mmcif_utils/persist/PdbxPersist.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/persist 2026-02-11T02:35:28,286 copying build/lib/mmcif_utils/persist/LockFile.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/persist 2026-02-11T02:35:28,288 copying build/lib/mmcif_utils/__init__.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils 2026-02-11T02:35:28,290 creating build/bdist.linux-armv7l/wheel/mmcif_utils/bird 2026-02-11T02:35:28,291 copying build/lib/mmcif_utils/bird/PdbxBirdIndex.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/bird 2026-02-11T02:35:28,294 copying build/lib/mmcif_utils/bird/PdbxPrdCcIo.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/bird 2026-02-11T02:35:28,296 copying build/lib/mmcif_utils/bird/PdbxFamilyIo.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/bird 2026-02-11T02:35:28,298 copying build/lib/mmcif_utils/bird/__init__.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/bird 2026-02-11T02:35:28,300 copying build/lib/mmcif_utils/bird/PdbxPrdIo.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/bird 2026-02-11T02:35:28,302 copying build/lib/mmcif_utils/bird/PdbxPrdUtils.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/bird 2026-02-11T02:35:28,305 copying build/lib/mmcif_utils/bird/PdbxPrd.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/bird 2026-02-11T02:35:28,308 creating build/bdist.linux-armv7l/wheel/mmcif_utils/bird/cl 2026-02-11T02:35:28,309 copying build/lib/mmcif_utils/bird/cl/PdbxPrdExec.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/bird/cl 2026-02-11T02:35:28,312 copying build/lib/mmcif_utils/bird/cl/__init__.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/bird/cl 2026-02-11T02:35:28,314 creating build/bdist.linux-armv7l/wheel/mmcif_utils/pdb 2026-02-11T02:35:28,315 copying build/lib/mmcif_utils/pdb/PdbxConnectTests.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/pdb 2026-02-11T02:35:28,317 copying build/lib/mmcif_utils/pdb/PdbxAnnFeature.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/pdb 2026-02-11T02:35:28,320 copying build/lib/mmcif_utils/pdb/__init__.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/pdb 2026-02-11T02:35:28,321 copying build/lib/mmcif_utils/pdb/PdbxVersion.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/pdb 2026-02-11T02:35:28,324 copying build/lib/mmcif_utils/pdb/PdbxConnect.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/pdb 2026-02-11T02:35:28,326 copying build/lib/mmcif_utils/pdb/PdbxAtomSite.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/pdb 2026-02-11T02:35:28,329 creating build/bdist.linux-armv7l/wheel/mmcif_utils/inventory 2026-02-11T02:35:28,330 copying build/lib/mmcif_utils/inventory/InventoryIoBatchRunner.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/inventory 2026-02-11T02:35:28,333 copying build/lib/mmcif_utils/inventory/__init__.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/inventory 2026-02-11T02:35:28,334 copying build/lib/mmcif_utils/inventory/InventoryIo.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/inventory 2026-02-11T02:35:28,337 creating build/bdist.linux-armv7l/wheel/mmcif_utils/chemcomp 2026-02-11T02:35:28,338 copying build/lib/mmcif_utils/chemcomp/PdbxChemComp.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/chemcomp 2026-02-11T02:35:28,340 copying build/lib/mmcif_utils/chemcomp/__init__.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/chemcomp 2026-02-11T02:35:28,342 copying build/lib/mmcif_utils/chemcomp/PdbxChemCompModel.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/chemcomp 2026-02-11T02:35:28,344 copying build/lib/mmcif_utils/chemcomp/PdbxChemCompModelIo.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/chemcomp 2026-02-11T02:35:28,346 copying build/lib/mmcif_utils/chemcomp/PdbxChemCompIo.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/chemcomp 2026-02-11T02:35:28,348 copying build/lib/mmcif_utils/chemcomp/PdbxChemCompUtils.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/chemcomp 2026-02-11T02:35:28,351 creating build/bdist.linux-armv7l/wheel/mmcif_utils/message 2026-02-11T02:35:28,352 copying build/lib/mmcif_utils/message/PdbxMessageIo.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/message 2026-02-11T02:35:28,355 copying build/lib/mmcif_utils/message/__init__.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/message 2026-02-11T02:35:28,356 copying build/lib/mmcif_utils/message/PdbxMessage.py -> build/bdist.linux-armv7l/wheel/./mmcif_utils/message 2026-02-11T02:35:28,359 running install_egg_info 2026-02-11T02:35:28,394 running egg_info 2026-02-11T02:35:28,420 writing mmcif.utils.egg-info/PKG-INFO 2026-02-11T02:35:28,424 writing dependency_links to mmcif.utils.egg-info/dependency_links.txt 2026-02-11T02:35:28,426 writing requirements to mmcif.utils.egg-info/requires.txt 2026-02-11T02:35:28,427 writing top-level names to mmcif.utils.egg-info/top_level.txt 2026-02-11T02:35:28,476 reading manifest file 'mmcif.utils.egg-info/SOURCES.txt' 2026-02-11T02:35:28,481 reading manifest template 'MANIFEST.in' 2026-02-11T02:35:28,482 warning: no previously-included files matching '*' found under directory 'mmcif_utils/tests' 2026-02-11T02:35:28,483 adding license file 'LICENSE' 2026-02-11T02:35:28,488 writing manifest file 'mmcif.utils.egg-info/SOURCES.txt' 2026-02-11T02:35:28,489 Copying mmcif.utils.egg-info to build/bdist.linux-armv7l/wheel/./mmcif.utils-0.32-py3.11.egg-info 2026-02-11T02:35:28,501 running install_scripts 2026-02-11T02:35:28,514 creating build/bdist.linux-armv7l/wheel/mmcif_utils-0.32.dist-info/WHEEL 2026-02-11T02:35:28,516 creating '/tmp/pip-wheel-f2rzme8r/mmcif_utils-0.32-py2.py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-02-11T02:35:28,519 adding 'mmcif_utils/__init__.py' 2026-02-11T02:35:28,521 adding 'mmcif_utils/bird/PdbxBirdIndex.py' 2026-02-11T02:35:28,523 adding 'mmcif_utils/bird/PdbxFamilyIo.py' 2026-02-11T02:35:28,525 adding 'mmcif_utils/bird/PdbxPrd.py' 2026-02-11T02:35:28,526 adding 'mmcif_utils/bird/PdbxPrdCcIo.py' 2026-02-11T02:35:28,528 adding 'mmcif_utils/bird/PdbxPrdIo.py' 2026-02-11T02:35:28,530 adding 'mmcif_utils/bird/PdbxPrdUtils.py' 2026-02-11T02:35:28,532 adding 'mmcif_utils/bird/__init__.py' 2026-02-11T02:35:28,535 adding 'mmcif_utils/bird/cl/PdbxPrdExec.py' 2026-02-11T02:35:28,536 adding 'mmcif_utils/bird/cl/__init__.py' 2026-02-11T02:35:28,538 adding 'mmcif_utils/chemcomp/PdbxChemComp.py' 2026-02-11T02:35:28,540 adding 'mmcif_utils/chemcomp/PdbxChemCompIo.py' 2026-02-11T02:35:28,541 adding 'mmcif_utils/chemcomp/PdbxChemCompModel.py' 2026-02-11T02:35:28,543 adding 'mmcif_utils/chemcomp/PdbxChemCompModelIo.py' 2026-02-11T02:35:28,545 adding 'mmcif_utils/chemcomp/PdbxChemCompUtils.py' 2026-02-11T02:35:28,547 adding 'mmcif_utils/chemcomp/__init__.py' 2026-02-11T02:35:28,549 adding 'mmcif_utils/inventory/InventoryIo.py' 2026-02-11T02:35:28,551 adding 'mmcif_utils/inventory/InventoryIoBatchRunner.py' 2026-02-11T02:35:28,552 adding 'mmcif_utils/inventory/__init__.py' 2026-02-11T02:35:28,554 adding 'mmcif_utils/message/PdbxMessage.py' 2026-02-11T02:35:28,556 adding 'mmcif_utils/message/PdbxMessageIo.py' 2026-02-11T02:35:28,557 adding 'mmcif_utils/message/__init__.py' 2026-02-11T02:35:28,559 adding 'mmcif_utils/pdb/PdbxAnnFeature.py' 2026-02-11T02:35:28,561 adding 'mmcif_utils/pdb/PdbxAtomSite.py' 2026-02-11T02:35:28,563 adding 'mmcif_utils/pdb/PdbxConnect.py' 2026-02-11T02:35:28,565 adding 'mmcif_utils/pdb/PdbxConnectTests.py' 2026-02-11T02:35:28,566 adding 'mmcif_utils/pdb/PdbxVersion.py' 2026-02-11T02:35:28,567 adding 'mmcif_utils/pdb/__init__.py' 2026-02-11T02:35:28,571 adding 'mmcif_utils/pdbx/PdbxIo.py' 2026-02-11T02:35:28,572 adding 'mmcif_utils/pdbx/__init__.py' 2026-02-11T02:35:28,574 adding 'mmcif_utils/persist/LockFile.py' 2026-02-11T02:35:28,575 adding 'mmcif_utils/persist/PdbxCoreIoAdapter.py' 2026-02-11T02:35:28,579 adding 'mmcif_utils/persist/PdbxDictionaryInfo.py' 2026-02-11T02:35:28,582 adding 'mmcif_utils/persist/PdbxPersist.py' 2026-02-11T02:35:28,583 adding 'mmcif_utils/persist/PdbxPyIoAdapter.py' 2026-02-11T02:35:28,585 adding 'mmcif_utils/persist/__init__.py' 2026-02-11T02:35:28,587 adding 'mmcif_utils/style/ChemCompCategoryStyle.py' 2026-02-11T02:35:28,588 adding 'mmcif_utils/style/ChemCompCategoryStyleWithOutStndAtom.py' 2026-02-11T02:35:28,590 adding 'mmcif_utils/style/ChemCompModelCategoryStyle.py' 2026-02-11T02:35:28,592 adding 'mmcif_utils/style/PdbxCategoryStyleBase.py' 2026-02-11T02:35:28,594 adding 'mmcif_utils/style/PdbxEmExtensionCategoryStyle.py' 2026-02-11T02:35:28,596 adding 'mmcif_utils/style/PdbxEntryInfoCategoryStyle.py' 2026-02-11T02:35:28,598 adding 'mmcif_utils/style/PdbxGeometryReportCategoryStyle.py' 2026-02-11T02:35:28,600 adding 'mmcif_utils/style/PdbxItemMappingCategoryStyle.py' 2026-02-11T02:35:28,601 adding 'mmcif_utils/style/PdbxLocalMapIndexCategoryStyle.py' 2026-02-11T02:35:28,602 adding 'mmcif_utils/style/PdbxMessageCategoryStyle.py' 2026-02-11T02:35:28,607 adding 'mmcif_utils/style/PdbxReportCategoryStyle.py' 2026-02-11T02:35:28,609 adding 'mmcif_utils/style/PdbxStatusHistoryCategoryStyle.py' 2026-02-11T02:35:28,612 adding 'mmcif_utils/style/PdbxStyleIoUtil.py' 2026-02-11T02:35:28,613 adding 'mmcif_utils/style/PdbxXrayExpReportCategoryStyle.py' 2026-02-11T02:35:28,615 adding 'mmcif_utils/style/PrdCategoryStyle.py' 2026-02-11T02:35:28,616 adding 'mmcif_utils/style/__init__.py' 2026-02-11T02:35:28,617 adding 'mmcif_utils/style/make-style-from-item-list.py' 2026-02-11T02:35:28,620 adding 'mmcif_utils/trans/DictionaryMapper.py' 2026-02-11T02:35:28,621 adding 'mmcif_utils/trans/DictionaryMapperIo.py' 2026-02-11T02:35:28,623 adding 'mmcif_utils/trans/FilterCif.py' 2026-02-11T02:35:28,625 adding 'mmcif_utils/trans/InstanceMapper.py' 2026-02-11T02:35:28,626 adding 'mmcif_utils/trans/__init__.py' 2026-02-11T02:35:28,629 adding 'mmcif_utils-0.32.dist-info/licenses/LICENSE' 2026-02-11T02:35:28,630 adding 'mmcif_utils-0.32.dist-info/METADATA' 2026-02-11T02:35:28,631 adding 'mmcif_utils-0.32.dist-info/WHEEL' 2026-02-11T02:35:28,632 adding 'mmcif_utils-0.32.dist-info/top_level.txt' 2026-02-11T02:35:28,633 adding 'mmcif_utils-0.32.dist-info/zip-safe' 2026-02-11T02:35:28,634 adding 'mmcif_utils-0.32.dist-info/RECORD' 2026-02-11T02:35:28,637 removing build/bdist.linux-armv7l/wheel 2026-02-11T02:35:28,762 Building wheel for mmcif-utils (setup.py): finished with status 'done' 2026-02-11T02:35:28,766 Created wheel for mmcif-utils: filename=mmcif_utils-0.32-py2.py3-none-any.whl size=122235 sha256=82f8fe31224a6b1a9c74a7c961c46d67f8b336c473892a5d269ca2adcd6bbfe8 2026-02-11T02:35:28,767 Stored in directory: /tmp/pip-ephem-wheel-cache-ak4fsun5/wheels/83/a4/40/f2c57a53b6bbd6cda5dbf845907069fdcb23849055201c670d 2026-02-11T02:35:28,778 Successfully built mmcif-utils 2026-02-11T02:35:28,785 Removed build tracker: '/tmp/pip-build-tracker-81veq7_c'