2026-02-11T08:57:21,855 Created temporary directory: /tmp/pip-ephem-wheel-cache-pz1xj1ij
2026-02-11T08:57:21,857 Created temporary directory: /tmp/pip-build-tracker-36lvfreg
2026-02-11T08:57:21,858 Initialized build tracking at /tmp/pip-build-tracker-36lvfreg
2026-02-11T08:57:21,858 Created build tracker: /tmp/pip-build-tracker-36lvfreg
2026-02-11T08:57:21,859 Entered build tracker: /tmp/pip-build-tracker-36lvfreg
2026-02-11T08:57:21,860 Created temporary directory: /tmp/pip-wheel-fcu1vttj
2026-02-11T08:57:21,863 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-02-11T08:57:21,865 Created temporary directory: /tmp/pip-ephem-wheel-cache-85iif4mx
2026-02-11T08:57:21,888 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-02-11T08:57:21,892 2 location(s) to search for versions of scipion-em-membrain:
2026-02-11T08:57:21,892 * https://pypi.org/simple/scipion-em-membrain/
2026-02-11T08:57:21,892 * https://www.piwheels.org/simple/scipion-em-membrain/
2026-02-11T08:57:21,893 Fetching project page and analyzing links: https://pypi.org/simple/scipion-em-membrain/
2026-02-11T08:57:21,894 Getting page https://pypi.org/simple/scipion-em-membrain/
2026-02-11T08:57:21,895 Found index url https://pypi.org/simple
2026-02-11T08:57:22,033 Fetched page https://pypi.org/simple/scipion-em-membrain/ as application/vnd.pypi.simple.v1+json
2026-02-11T08:57:22,037   Skipping link: No binaries permitted for scipion-em-membrain: https://files.pythonhosted.org/packages/75/bd/9e8ca0d268f3f5d026895eb9176dcd5b4e34bfe885688f0bea727c6f58c2/scipion_em_membrain-3.0.0-py3-none-any.whl (from https://pypi.org/simple/scipion-em-membrain/) (requires-python:>=3.8)
2026-02-11T08:57:22,038   Found link https://files.pythonhosted.org/packages/97/ad/96d7ecc261d6e17ff53df76ab29161212cda86085e96130731d4cd102684/scipion_em_membrain-3.0.0.tar.gz (from https://pypi.org/simple/scipion-em-membrain/) (requires-python:>=3.8), version: 3.0.0
2026-02-11T08:57:22,039   Skipping link: No binaries permitted for scipion-em-membrain: https://files.pythonhosted.org/packages/16/f6/54d319054f5593143037c8c8d76a95c3fea4a5a382ec56f20d369e9f5e27/scipion_em_membrain-3.0.1-py3-none-any.whl (from https://pypi.org/simple/scipion-em-membrain/) (requires-python:>=3.8)
2026-02-11T08:57:22,040   Found link https://files.pythonhosted.org/packages/1a/48/49f5dd87c57c3b00191b3e428824d7725687a10d62996cf1efdc3ea9be44/scipion_em_membrain-3.0.1.tar.gz (from https://pypi.org/simple/scipion-em-membrain/) (requires-python:>=3.8), version: 3.0.1
2026-02-11T08:57:22,040   Skipping link: No binaries permitted for scipion-em-membrain: https://files.pythonhosted.org/packages/b8/e5/8c8efb548da52e579491ad01cacb4519f15057c38fd9add04f4cc7ed406a/scipion_em_membrain-3.1.0-py3-none-any.whl (from https://pypi.org/simple/scipion-em-membrain/) (requires-python:>=3.8)
2026-02-11T08:57:22,041   Found link https://files.pythonhosted.org/packages/e6/ad/638eeab06f72c0db15f0e2ae521dbc4f3185d84b5ecf707cca71eedce3fa/scipion_em_membrain-3.1.0.tar.gz (from https://pypi.org/simple/scipion-em-membrain/) (requires-python:>=3.8), version: 3.1.0
2026-02-11T08:57:22,042   Skipping link: No binaries permitted for scipion-em-membrain: https://files.pythonhosted.org/packages/26/b4/6d0d3c35fe6277640711ebba246141c9d2275c4a31cd3b00c2c1b4cda722/scipion_em_membrain-3.1.1-py3-none-any.whl (from https://pypi.org/simple/scipion-em-membrain/) (requires-python:>=3.8)
2026-02-11T08:57:22,043   Found link https://files.pythonhosted.org/packages/71/c2/e83765bdf569131e520c8fa0befb95603c1b5f5eb3bdafb1f88a7a2f6282/scipion_em_membrain-3.1.1.tar.gz (from https://pypi.org/simple/scipion-em-membrain/) (requires-python:>=3.8), version: 3.1.1
2026-02-11T08:57:22,044   Skipping link: No binaries permitted for scipion-em-membrain: https://files.pythonhosted.org/packages/f4/f6/493df78c5d8f87f301edfa70c1001e023502cad1536cb1afd08988514aba/scipion_em_membrain-3.1.2-py3-none-any.whl (from https://pypi.org/simple/scipion-em-membrain/) (requires-python:>=3.8)
2026-02-11T08:57:22,045   Found link https://files.pythonhosted.org/packages/e0/95/d6271a556ceb3c6bf59a79a97b5dabf62d21152fce4306f01a7248f9aeb5/scipion_em_membrain-3.1.2.tar.gz (from https://pypi.org/simple/scipion-em-membrain/) (requires-python:>=3.8), version: 3.1.2
2026-02-11T08:57:22,046   Skipping link: No binaries permitted for scipion-em-membrain: https://files.pythonhosted.org/packages/85/3c/12ca83d143dd6e9ceea103ca23577800ca5b466e505e06cf3155aaf0cfd7/scipion_em_membrain-3.1.3-py3-none-any.whl (from https://pypi.org/simple/scipion-em-membrain/) (requires-python:>=3.8)
2026-02-11T08:57:22,047   Found link https://files.pythonhosted.org/packages/ea/c6/4acb4030111490934273f6b4745d2fa86c86a12057129d366dfd0acec927/scipion_em_membrain-3.1.3.tar.gz (from https://pypi.org/simple/scipion-em-membrain/) (requires-python:>=3.8), version: 3.1.3
2026-02-11T08:57:22,047   Skipping link: No binaries permitted for scipion-em-membrain: https://files.pythonhosted.org/packages/63/02/cbb0b2b521f39abb9a6bb8ef1162ea370e9e28c3a863184ed390c8ae2680/scipion_em_membrain-3.1.4-py3-none-any.whl (from https://pypi.org/simple/scipion-em-membrain/) (requires-python:>=3.8)
2026-02-11T08:57:22,048   Found link https://files.pythonhosted.org/packages/2a/fb/9981f62bdee5e1c0314738e0d7c26986de0a03b9ac3c358fcc741649f39d/scipion_em_membrain-3.1.4.tar.gz (from https://pypi.org/simple/scipion-em-membrain/) (requires-python:>=3.8), version: 3.1.4
2026-02-11T08:57:22,049 Fetching project page and analyzing links: https://www.piwheels.org/simple/scipion-em-membrain/
2026-02-11T08:57:22,049 Getting page https://www.piwheels.org/simple/scipion-em-membrain/
2026-02-11T08:57:22,051 Found index url https://www.piwheels.org/simple
2026-02-11T08:57:22,206 Fetched page https://www.piwheels.org/simple/scipion-em-membrain/ as text/html
2026-02-11T08:57:22,208   Skipping link: No binaries permitted for scipion-em-membrain: https://www.piwheels.org/simple/scipion-em-membrain/scipion_em_membrain-3.1.2-py3-none-any.whl#sha256=601d5f677a855dc255935b3606636201a73c119ee48d2737331cb3248ba9de84 (from https://www.piwheels.org/simple/scipion-em-membrain/) (requires-python:>=3.8)
2026-02-11T08:57:22,209   Skipping link: No binaries permitted for scipion-em-membrain: https://www.piwheels.org/simple/scipion-em-membrain/scipion_em_membrain-3.1.1-py3-none-any.whl#sha256=4cedc68f5e116d5829618b8ce019a7adad2e9c9d86a222cb1b7738d642140397 (from https://www.piwheels.org/simple/scipion-em-membrain/) (requires-python:>=3.8)
2026-02-11T08:57:22,210   Skipping link: No binaries permitted for scipion-em-membrain: https://www.piwheels.org/simple/scipion-em-membrain/scipion_em_membrain-3.1.0-py3-none-any.whl#sha256=467e45e3b7b82f4f268b6e19f09a6b4d7cceb345a354542230e08841da968615 (from https://www.piwheels.org/simple/scipion-em-membrain/) (requires-python:>=3.8)
2026-02-11T08:57:22,210   Skipping link: No binaries permitted for scipion-em-membrain: https://www.piwheels.org/simple/scipion-em-membrain/scipion_em_membrain-3.0.1-py3-none-any.whl#sha256=5f445fad858170f1d787321c9ff8aa8183c797adb0b8fc5c9152892a53032003 (from https://www.piwheels.org/simple/scipion-em-membrain/) (requires-python:>=3.8)
2026-02-11T08:57:22,211   Skipping link: No binaries permitted for scipion-em-membrain: https://archive1.piwheels.org/simple/scipion-em-membrain/scipion_em_membrain-3.0.0-py3-none-any.whl#sha256=af53292bbc51cab29f0a8a12b9ce20dc7efa79c0b687451426d0beef96f1c465 (from https://www.piwheels.org/simple/scipion-em-membrain/) (requires-python:>=3.8)
2026-02-11T08:57:22,211 Skipping link: not a file: https://www.piwheels.org/simple/scipion-em-membrain/
2026-02-11T08:57:22,212 Skipping link: not a file: https://pypi.org/simple/scipion-em-membrain/
2026-02-11T08:57:22,232 Given no hashes to check 1 links for project 'scipion-em-membrain': discarding no candidates
2026-02-11T08:57:22,250 Collecting scipion-em-membrain==3.1.3
2026-02-11T08:57:22,252   Created temporary directory: /tmp/pip-unpack-owjlkvgy
2026-02-11T08:57:22,462   Downloading scipion_em_membrain-3.1.3.tar.gz (89 kB)
2026-02-11T08:57:22,582   Added scipion-em-membrain==3.1.3 from https://files.pythonhosted.org/packages/ea/c6/4acb4030111490934273f6b4745d2fa86c86a12057129d366dfd0acec927/scipion_em_membrain-3.1.3.tar.gz to build tracker '/tmp/pip-build-tracker-36lvfreg'
2026-02-11T08:57:22,587   Created temporary directory: /tmp/pip-build-env-bcjjgkr2
2026-02-11T08:57:22,591   Installing build dependencies: started
2026-02-11T08:57:22,593   Running command pip subprocess to install build dependencies
2026-02-11T08:57:23,716   Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11)
2026-02-11T08:57:24,269   DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-02-11T08:57:24,291   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-02-11T08:57:26,011   Collecting setuptools
2026-02-11T08:57:26,031     Using cached setuptools-82.0.0-py3-none-any.whl (1.0 MB)
2026-02-11T08:57:26,292   Collecting wheel
2026-02-11T08:57:26,309     Using cached https://www.piwheels.org/simple/wheel/wheel-0.46.3-py3-none-any.whl (30 kB)
2026-02-11T08:57:26,495   Collecting packaging>=24.0
2026-02-11T08:57:26,513     Using cached https://www.piwheels.org/simple/packaging/packaging-26.0-py3-none-any.whl (74 kB)
2026-02-11T08:57:29,495   Installing collected packages: setuptools, packaging, wheel
2026-02-11T08:57:32,908     Creating /tmp/pip-build-env-bcjjgkr2/overlay/local/bin
2026-02-11T08:57:32,910     changing mode of /tmp/pip-build-env-bcjjgkr2/overlay/local/bin/wheel to 755
2026-02-11T08:57:32,931   Successfully installed packaging-26.0 setuptools-82.0.0 wheel-0.46.3
2026-02-11T08:57:33,207   Installing build dependencies: finished with status 'done'
2026-02-11T08:57:33,214   Getting requirements to build wheel: started
2026-02-11T08:57:33,215   Running command Getting requirements to build wheel
2026-02-11T08:57:33,800   No `packages` or `py_modules` configuration, performing automatic discovery.
2026-02-11T08:57:33,801   `flat-layout` detected -- analysing .
2026-02-11T08:57:33,816   discovered packages -- ['membrain', 'membrain.tests', 'membrain.protocols']
2026-02-11T08:57:33,823   /tmp/pip-build-env-bcjjgkr2/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated
2026-02-11T08:57:33,824   !!

2026-02-11T08:57:33,825           ********************************************************************************
2026-02-11T08:57:33,825           Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0).

2026-02-11T08:57:33,826           By 2027-Feb-18, you need to update your project and remove deprecated calls
2026-02-11T08:57:33,827           or your builds will no longer be supported.

2026-02-11T08:57:33,828           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-02-11T08:57:33,829           ********************************************************************************

2026-02-11T08:57:33,830   !!
2026-02-11T08:57:33,830     corresp(dist, value, root_dir)
2026-02-11T08:57:33,901   /tmp/pip-build-env-bcjjgkr2/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-02-11T08:57:33,902   !!

2026-02-11T08:57:33,903           ********************************************************************************
2026-02-11T08:57:33,903           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-02-11T08:57:33,904           License :: OSI Approved :: GNU General Public License v3 (GPLv3)

2026-02-11T08:57:33,905           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-02-11T08:57:33,906           ********************************************************************************

2026-02-11T08:57:33,907   !!
2026-02-11T08:57:33,907     dist._finalize_license_expression()
2026-02-11T08:57:33,908   /tmp/pip-build-env-bcjjgkr2/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-02-11T08:57:33,908   !!

2026-02-11T08:57:33,909           ********************************************************************************
2026-02-11T08:57:33,909           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-02-11T08:57:33,910           License :: OSI Approved :: GNU General Public License v3 (GPLv3)

2026-02-11T08:57:33,911           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-02-11T08:57:33,912           ********************************************************************************

2026-02-11T08:57:33,913   !!
2026-02-11T08:57:33,913     self._finalize_license_expression()
2026-02-11T08:57:33,914   running egg_info
2026-02-11T08:57:33,917   writing scipion_em_membrain.egg-info/PKG-INFO
2026-02-11T08:57:33,920   writing dependency_links to scipion_em_membrain.egg-info/dependency_links.txt
2026-02-11T08:57:33,921   writing entry points to scipion_em_membrain.egg-info/entry_points.txt
2026-02-11T08:57:33,923   writing requirements to scipion_em_membrain.egg-info/requires.txt
2026-02-11T08:57:33,924   writing top-level names to scipion_em_membrain.egg-info/top_level.txt
2026-02-11T08:57:33,944   reading manifest file 'scipion_em_membrain.egg-info/SOURCES.txt'
2026-02-11T08:57:33,947   reading manifest template 'MANIFEST.in'
2026-02-11T08:57:33,949   adding license file 'LICENSE'
2026-02-11T08:57:33,952   writing manifest file 'scipion_em_membrain.egg-info/SOURCES.txt'
2026-02-11T08:57:34,049   Getting requirements to build wheel: finished with status 'done'
2026-02-11T08:57:34,052   Created temporary directory: /tmp/pip-modern-metadata-moizmxv3
2026-02-11T08:57:34,054   Preparing metadata (pyproject.toml): started
2026-02-11T08:57:34,056   Running command Preparing metadata (pyproject.toml)
2026-02-11T08:57:34,609   No `packages` or `py_modules` configuration, performing automatic discovery.
2026-02-11T08:57:34,609   `flat-layout` detected -- analysing .
2026-02-11T08:57:34,624   discovered packages -- ['membrain', 'membrain.tests', 'membrain.protocols']
2026-02-11T08:57:34,630   /tmp/pip-build-env-bcjjgkr2/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated
2026-02-11T08:57:34,631   !!

2026-02-11T08:57:34,632           ********************************************************************************
2026-02-11T08:57:34,632           Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0).

2026-02-11T08:57:34,634           By 2027-Feb-18, you need to update your project and remove deprecated calls
2026-02-11T08:57:34,634           or your builds will no longer be supported.

2026-02-11T08:57:34,635           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-02-11T08:57:34,636           ********************************************************************************

2026-02-11T08:57:34,637   !!
2026-02-11T08:57:34,638     corresp(dist, value, root_dir)
2026-02-11T08:57:34,705   /tmp/pip-build-env-bcjjgkr2/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-02-11T08:57:34,705   !!

2026-02-11T08:57:34,706           ********************************************************************************
2026-02-11T08:57:34,707           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-02-11T08:57:34,708           License :: OSI Approved :: GNU General Public License v3 (GPLv3)

2026-02-11T08:57:34,709           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-02-11T08:57:34,709           ********************************************************************************

2026-02-11T08:57:34,710   !!
2026-02-11T08:57:34,711     dist._finalize_license_expression()
2026-02-11T08:57:34,711   /tmp/pip-build-env-bcjjgkr2/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-02-11T08:57:34,712   !!

2026-02-11T08:57:34,712           ********************************************************************************
2026-02-11T08:57:34,713           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-02-11T08:57:34,714           License :: OSI Approved :: GNU General Public License v3 (GPLv3)

2026-02-11T08:57:34,715           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-02-11T08:57:34,715           ********************************************************************************

2026-02-11T08:57:34,716   !!
2026-02-11T08:57:34,717     self._finalize_license_expression()
2026-02-11T08:57:34,718   running dist_info
2026-02-11T08:57:34,728   creating /tmp/pip-modern-metadata-moizmxv3/scipion_em_membrain.egg-info
2026-02-11T08:57:34,729   writing /tmp/pip-modern-metadata-moizmxv3/scipion_em_membrain.egg-info/PKG-INFO
2026-02-11T08:57:34,732   writing dependency_links to /tmp/pip-modern-metadata-moizmxv3/scipion_em_membrain.egg-info/dependency_links.txt
2026-02-11T08:57:34,734   writing entry points to /tmp/pip-modern-metadata-moizmxv3/scipion_em_membrain.egg-info/entry_points.txt
2026-02-11T08:57:34,735   writing requirements to /tmp/pip-modern-metadata-moizmxv3/scipion_em_membrain.egg-info/requires.txt
2026-02-11T08:57:34,736   writing top-level names to /tmp/pip-modern-metadata-moizmxv3/scipion_em_membrain.egg-info/top_level.txt
2026-02-11T08:57:34,738   writing manifest file '/tmp/pip-modern-metadata-moizmxv3/scipion_em_membrain.egg-info/SOURCES.txt'
2026-02-11T08:57:34,756   reading manifest file '/tmp/pip-modern-metadata-moizmxv3/scipion_em_membrain.egg-info/SOURCES.txt'
2026-02-11T08:57:34,758   reading manifest template 'MANIFEST.in'
2026-02-11T08:57:34,761   adding license file 'LICENSE'
2026-02-11T08:57:34,763   writing manifest file '/tmp/pip-modern-metadata-moizmxv3/scipion_em_membrain.egg-info/SOURCES.txt'
2026-02-11T08:57:34,764   creating '/tmp/pip-modern-metadata-moizmxv3/scipion_em_membrain-3.1.3.dist-info'
2026-02-11T08:57:34,889   Preparing metadata (pyproject.toml): finished with status 'done'
2026-02-11T08:57:34,894   Source in /tmp/pip-wheel-fcu1vttj/scipion-em-membrain_b28b0d60c10c48989115618f4907a23e has version 3.1.3, which satisfies requirement scipion-em-membrain==3.1.3 from https://files.pythonhosted.org/packages/ea/c6/4acb4030111490934273f6b4745d2fa86c86a12057129d366dfd0acec927/scipion_em_membrain-3.1.3.tar.gz
2026-02-11T08:57:34,895   Removed scipion-em-membrain==3.1.3 from https://files.pythonhosted.org/packages/ea/c6/4acb4030111490934273f6b4745d2fa86c86a12057129d366dfd0acec927/scipion_em_membrain-3.1.3.tar.gz from build tracker '/tmp/pip-build-tracker-36lvfreg'
2026-02-11T08:57:34,901 Created temporary directory: /tmp/pip-unpack-3rfolljp
2026-02-11T08:57:34,902 Building wheels for collected packages: scipion-em-membrain
2026-02-11T08:57:34,906   Created temporary directory: /tmp/pip-wheel-412xvb5q
2026-02-11T08:57:34,907   Destination directory: /tmp/pip-wheel-412xvb5q
2026-02-11T08:57:34,909   Building wheel for scipion-em-membrain (pyproject.toml): started
2026-02-11T08:57:34,911   Running command Building wheel for scipion-em-membrain (pyproject.toml)
2026-02-11T08:57:35,450   No `packages` or `py_modules` configuration, performing automatic discovery.
2026-02-11T08:57:35,451   `flat-layout` detected -- analysing .
2026-02-11T08:57:35,466   discovered packages -- ['membrain', 'membrain.tests', 'membrain.protocols']
2026-02-11T08:57:35,472   /tmp/pip-build-env-bcjjgkr2/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated
2026-02-11T08:57:35,472   !!

2026-02-11T08:57:35,473           ********************************************************************************
2026-02-11T08:57:35,474           Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0).

2026-02-11T08:57:35,475           By 2027-Feb-18, you need to update your project and remove deprecated calls
2026-02-11T08:57:35,475           or your builds will no longer be supported.

2026-02-11T08:57:35,476           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-02-11T08:57:35,476           ********************************************************************************

2026-02-11T08:57:35,477   !!
2026-02-11T08:57:35,478     corresp(dist, value, root_dir)
2026-02-11T08:57:35,540   /tmp/pip-build-env-bcjjgkr2/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-02-11T08:57:35,540   !!

2026-02-11T08:57:35,542           ********************************************************************************
2026-02-11T08:57:35,542           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-02-11T08:57:35,543           License :: OSI Approved :: GNU General Public License v3 (GPLv3)

2026-02-11T08:57:35,544           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-02-11T08:57:35,545           ********************************************************************************

2026-02-11T08:57:35,546   !!
2026-02-11T08:57:35,547     dist._finalize_license_expression()
2026-02-11T08:57:35,547   /tmp/pip-build-env-bcjjgkr2/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-02-11T08:57:35,548   !!

2026-02-11T08:57:35,549           ********************************************************************************
2026-02-11T08:57:35,550           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-02-11T08:57:35,551           License :: OSI Approved :: GNU General Public License v3 (GPLv3)

2026-02-11T08:57:35,552           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-02-11T08:57:35,553           ********************************************************************************

2026-02-11T08:57:35,554   !!
2026-02-11T08:57:35,554     self._finalize_license_expression()
2026-02-11T08:57:35,555   running bdist_wheel
2026-02-11T08:57:35,568   running build
2026-02-11T08:57:35,569   running build_py
2026-02-11T08:57:35,575   creating build/lib/membrain
2026-02-11T08:57:35,577   copying membrain/bibtex.py -> build/lib/membrain
2026-02-11T08:57:35,580   copying membrain/__init__.py -> build/lib/membrain
2026-02-11T08:57:35,582   copying membrain/constants.py -> build/lib/membrain
2026-02-11T08:57:35,584   creating build/lib/membrain/tests
2026-02-11T08:57:35,585   copying membrain/tests/test_membrain.py -> build/lib/membrain/tests
2026-02-11T08:57:35,588   copying membrain/tests/__init__.py -> build/lib/membrain/tests
2026-02-11T08:57:35,590   creating build/lib/membrain/protocols
2026-02-11T08:57:35,591   copying membrain/protocols/protocol_membrain_seg.py -> build/lib/membrain/protocols
2026-02-11T08:57:35,594   copying membrain/protocols/__init__.py -> build/lib/membrain/protocols
2026-02-11T08:57:35,596   copying membrain/protocols/protocol_membrain_skeletonize.py -> build/lib/membrain/protocols
2026-02-11T08:57:35,597   running egg_info
2026-02-11T08:57:35,607   writing scipion_em_membrain.egg-info/PKG-INFO
2026-02-11T08:57:35,609   writing dependency_links to scipion_em_membrain.egg-info/dependency_links.txt
2026-02-11T08:57:35,611   writing entry points to scipion_em_membrain.egg-info/entry_points.txt
2026-02-11T08:57:35,612   writing requirements to scipion_em_membrain.egg-info/requires.txt
2026-02-11T08:57:35,613   writing top-level names to scipion_em_membrain.egg-info/top_level.txt
2026-02-11T08:57:35,623   reading manifest file 'scipion_em_membrain.egg-info/SOURCES.txt'
2026-02-11T08:57:35,625   reading manifest template 'MANIFEST.in'
2026-02-11T08:57:35,628   adding license file 'LICENSE'
2026-02-11T08:57:35,631   writing manifest file 'scipion_em_membrain.egg-info/SOURCES.txt'
2026-02-11T08:57:35,634   copying membrain/icon.png -> build/lib/membrain
2026-02-11T08:57:35,638   copying membrain/protocols.conf -> build/lib/membrain
2026-02-11T08:57:35,650   installing to build/bdist.linux-armv7l/wheel
2026-02-11T08:57:35,650   running install
2026-02-11T08:57:35,674   running install_lib
2026-02-11T08:57:35,680   creating build/bdist.linux-armv7l/wheel
2026-02-11T08:57:35,682   creating build/bdist.linux-armv7l/wheel/membrain
2026-02-11T08:57:35,684   creating build/bdist.linux-armv7l/wheel/membrain/tests
2026-02-11T08:57:35,686   copying build/lib/membrain/tests/test_membrain.py -> build/bdist.linux-armv7l/wheel/./membrain/tests
2026-02-11T08:57:35,689   copying build/lib/membrain/tests/__init__.py -> build/bdist.linux-armv7l/wheel/./membrain/tests
2026-02-11T08:57:35,690   copying build/lib/membrain/bibtex.py -> build/bdist.linux-armv7l/wheel/./membrain
2026-02-11T08:57:35,693   copying build/lib/membrain/protocols.conf -> build/bdist.linux-armv7l/wheel/./membrain
2026-02-11T08:57:35,695   copying build/lib/membrain/__init__.py -> build/bdist.linux-armv7l/wheel/./membrain
2026-02-11T08:57:35,697   copying build/lib/membrain/icon.png -> build/bdist.linux-armv7l/wheel/./membrain
2026-02-11T08:57:35,701   copying build/lib/membrain/constants.py -> build/bdist.linux-armv7l/wheel/./membrain
2026-02-11T08:57:35,703   creating build/bdist.linux-armv7l/wheel/membrain/protocols
2026-02-11T08:57:35,704   copying build/lib/membrain/protocols/protocol_membrain_seg.py -> build/bdist.linux-armv7l/wheel/./membrain/protocols
2026-02-11T08:57:35,707   copying build/lib/membrain/protocols/__init__.py -> build/bdist.linux-armv7l/wheel/./membrain/protocols
2026-02-11T08:57:35,709   copying build/lib/membrain/protocols/protocol_membrain_skeletonize.py -> build/bdist.linux-armv7l/wheel/./membrain/protocols
2026-02-11T08:57:35,711   running install_egg_info
2026-02-11T08:57:35,715   Copying scipion_em_membrain.egg-info to build/bdist.linux-armv7l/wheel/./scipion_em_membrain-3.1.3-py3.11.egg-info
2026-02-11T08:57:35,726   running install_scripts
2026-02-11T08:57:35,738   creating build/bdist.linux-armv7l/wheel/scipion_em_membrain-3.1.3.dist-info/WHEEL
2026-02-11T08:57:35,741   creating '/tmp/pip-wheel-412xvb5q/.tmp-zw_mwtj2/scipion_em_membrain-3.1.3-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2026-02-11T08:57:35,743   adding 'membrain/__init__.py'
2026-02-11T08:57:35,745   adding 'membrain/bibtex.py'
2026-02-11T08:57:35,747   adding 'membrain/constants.py'
2026-02-11T08:57:35,753   adding 'membrain/icon.png'
2026-02-11T08:57:35,755   adding 'membrain/protocols.conf'
2026-02-11T08:57:35,757   adding 'membrain/protocols/__init__.py'
2026-02-11T08:57:35,759   adding 'membrain/protocols/protocol_membrain_seg.py'
2026-02-11T08:57:35,760   adding 'membrain/protocols/protocol_membrain_skeletonize.py'
2026-02-11T08:57:35,762   adding 'membrain/tests/__init__.py'
2026-02-11T08:57:35,764   adding 'membrain/tests/test_membrain.py'
2026-02-11T08:57:35,771   adding 'scipion_em_membrain-3.1.3.dist-info/licenses/LICENSE'
2026-02-11T08:57:35,773   adding 'scipion_em_membrain-3.1.3.dist-info/METADATA'
2026-02-11T08:57:35,774   adding 'scipion_em_membrain-3.1.3.dist-info/WHEEL'
2026-02-11T08:57:35,775   adding 'scipion_em_membrain-3.1.3.dist-info/entry_points.txt'
2026-02-11T08:57:35,776   adding 'scipion_em_membrain-3.1.3.dist-info/top_level.txt'
2026-02-11T08:57:35,777   adding 'scipion_em_membrain-3.1.3.dist-info/RECORD'
2026-02-11T08:57:35,780   removing build/bdist.linux-armv7l/wheel
2026-02-11T08:57:35,885   Building wheel for scipion-em-membrain (pyproject.toml): finished with status 'done'
2026-02-11T08:57:35,891   Created wheel for scipion-em-membrain: filename=scipion_em_membrain-3.1.3-py3-none-any.whl size=91231 sha256=8629981c9411de3c13c53a1588551e62606739ac320dac5845bb8cd03b1e4a94
2026-02-11T08:57:35,892   Stored in directory: /tmp/pip-ephem-wheel-cache-85iif4mx/wheels/a2/b6/3a/bd6ffc93d7c6ec05acc78d899bfbf6594053ed4a1a52a1bbe3
2026-02-11T08:57:35,903 Successfully built scipion-em-membrain
2026-02-11T08:57:35,909 Removed build tracker: '/tmp/pip-build-tracker-36lvfreg'