2026-02-11T23:08:57,580 Created temporary directory: /tmp/pip-ephem-wheel-cache-x63i8lq_
2026-02-11T23:08:57,583 Created temporary directory: /tmp/pip-build-tracker-gh7kskfz
2026-02-11T23:08:57,583 Initialized build tracking at /tmp/pip-build-tracker-gh7kskfz
2026-02-11T23:08:57,584 Created build tracker: /tmp/pip-build-tracker-gh7kskfz
2026-02-11T23:08:57,584 Entered build tracker: /tmp/pip-build-tracker-gh7kskfz
2026-02-11T23:08:57,585 Created temporary directory: /tmp/pip-wheel-ljstks3a
2026-02-11T23:08:57,588 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-02-11T23:08:57,590 Created temporary directory: /tmp/pip-ephem-wheel-cache-32ck5uj4
2026-02-11T23:08:57,612 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-02-11T23:08:57,616 2 location(s) to search for versions of sdrf-pipelines:
2026-02-11T23:08:57,616 * https://pypi.org/simple/sdrf-pipelines/
2026-02-11T23:08:57,616 * https://www.piwheels.org/simple/sdrf-pipelines/
2026-02-11T23:08:57,617 Fetching project page and analyzing links: https://pypi.org/simple/sdrf-pipelines/
2026-02-11T23:08:57,618 Getting page https://pypi.org/simple/sdrf-pipelines/
2026-02-11T23:08:57,619 Found index url https://pypi.org/simple
2026-02-11T23:08:57,834 Fetched page https://pypi.org/simple/sdrf-pipelines/ as application/vnd.pypi.simple.v1+json
2026-02-11T23:08:57,847   Found link https://files.pythonhosted.org/packages/bc/43/8f4e0f9bf5b07266d420a9a2cedd4181156f07756de8d6d57eeb55beb038/sdrf-pipelines-0.0.1.tar.gz (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.5), version: 0.0.1
2026-02-11T23:08:57,848   Skipping link: No binaries permitted for sdrf-pipelines: https://files.pythonhosted.org/packages/0d/d0/c33c029cacb9e0fbb9451d786d48908ab418f7ea1e44c96d22facdba211a/sdrf_pipelines-0.0.1-py3-none-any.whl (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.5)
2026-02-11T23:08:57,849   Found link https://files.pythonhosted.org/packages/01/58/4b301047a6b59be4fd26961f666580019d07741fe4e9da9a0763787e6352/sdrf-pipelines-0.0.2.tar.gz (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.5), version: 0.0.2
2026-02-11T23:08:57,850   Skipping link: No binaries permitted for sdrf-pipelines: https://files.pythonhosted.org/packages/eb/e9/fe097bc8b4dfecd351caf56ed1a819134eb8433161ef5cccc88848d6101d/sdrf_pipelines-0.0.2-py3-none-any.whl (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.5)
2026-02-11T23:08:57,851   Found link https://files.pythonhosted.org/packages/60/2a/1acbe5e5696cc229a8d66a8ff1000b7c9a30ed41b1aea74998da7bbf7cf8/sdrf-pipelines-0.0.3.tar.gz (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.5), version: 0.0.3
2026-02-11T23:08:57,852   Skipping link: No binaries permitted for sdrf-pipelines: https://files.pythonhosted.org/packages/c8/4a/8ba4b9e82fcd3ca353ecfe64893c3849e22b93f5c3f774c06f69509622dc/sdrf_pipelines-0.0.3-py3-none-any.whl (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.5)
2026-02-11T23:08:57,853   Found link https://files.pythonhosted.org/packages/60/61/7711b13200fd88bdfd3eceae3ee69b0a29b8180a8086dbe07d6fda303613/sdrf-pipelines-0.0.4.tar.gz (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.5), version: 0.0.4
2026-02-11T23:08:57,853   Skipping link: No binaries permitted for sdrf-pipelines: https://files.pythonhosted.org/packages/64/30/65ad243b8b8ccbe49c04dc29f9198004b6548e9eead990da1ca760e69d43/sdrf_pipelines-0.0.4-py3-none-any.whl (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.5)
2026-02-11T23:08:57,854   Found link https://files.pythonhosted.org/packages/ed/94/9e001583f826955b50226da80a3f0e85736718a16bdfd288d63c3ec6422f/sdrf-pipelines-0.0.5.tar.gz (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.5), version: 0.0.5
2026-02-11T23:08:57,855   Skipping link: No binaries permitted for sdrf-pipelines: https://files.pythonhosted.org/packages/aa/33/32539a229920bf2828fbaafe3b247488bae1e39b221b4a2b61981217b613/sdrf_pipelines-0.0.5-py3-none-any.whl (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.5)
2026-02-11T23:08:57,856   Found link https://files.pythonhosted.org/packages/d0/19/05245ac4d0b3a1436e45f720884e98c557db4de416df285565bba6a06433/sdrf-pipelines-0.0.6.tar.gz (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.6), version: 0.0.6
2026-02-11T23:08:57,857   Skipping link: No binaries permitted for sdrf-pipelines: https://files.pythonhosted.org/packages/58/bb/f8598e4ff6f6f1ba7412e3dfb249d7ea128cddd501608f2bb7eaebaa3339/sdrf_pipelines-0.0.6-py3-none-any.whl (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.6)
2026-02-11T23:08:57,858   Found link https://files.pythonhosted.org/packages/a2/87/59dcd9947494c05ecb238da00aa3f4c83e6e910f968a056e16193a91f957/sdrf-pipelines-0.0.7.tar.gz (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.6), version: 0.0.7
2026-02-11T23:08:57,858   Skipping link: No binaries permitted for sdrf-pipelines: https://files.pythonhosted.org/packages/67/e9/1fa6c39012d4816dfc31485ae6eceb41e47e6d483693549405ea96ef46a6/sdrf_pipelines-0.0.7-py3-none-any.whl (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.6)
2026-02-11T23:08:57,859   Found link https://files.pythonhosted.org/packages/00/b2/c2e58c2f218d173b5523f9a5b43a26ef598cb9344db6d69cba48173e3951/sdrf-pipelines-0.0.8.tar.gz (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.6), version: 0.0.8
2026-02-11T23:08:57,860   Skipping link: No binaries permitted for sdrf-pipelines: https://files.pythonhosted.org/packages/53/43/7b7dfd6a6d13bd54e4b3746e44462b8e4fe3a31ad90cb15e9e6fec1bce5e/sdrf_pipelines-0.0.8-py3-none-any.whl (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.6)
2026-02-11T23:08:57,861   Found link https://files.pythonhosted.org/packages/b6/20/99f0af165aa753aa3edbd1811a440922b7c7f23ab7e049bfb1c08210b9c3/sdrf-pipelines-0.0.9.tar.gz (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.6), version: 0.0.9
2026-02-11T23:08:57,862   Skipping link: No binaries permitted for sdrf-pipelines: https://files.pythonhosted.org/packages/3d/59/723683552994bda6b033cbeca1666efcc85dccee509e1da7cd5028aa6668/sdrf_pipelines-0.0.9-py3-none-any.whl (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.6)
2026-02-11T23:08:57,863   Found link https://files.pythonhosted.org/packages/56/88/67fcec00757412173c55aa43991459548dabf4d5a38f81a85b4bf3135fb8/sdrf-pipelines-0.0.10.tar.gz (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.6), version: 0.0.10
2026-02-11T23:08:57,863   Skipping link: No binaries permitted for sdrf-pipelines: https://files.pythonhosted.org/packages/b0/1d/5fe1f961589890c96c61b0ba142029c1bb74567316a69b4abe5d53d574ed/sdrf_pipelines-0.0.10-py3-none-any.whl (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.6)
2026-02-11T23:08:57,864   Found link https://files.pythonhosted.org/packages/b2/e1/9fdedbf218604ce1796683588f07bdbdae42024115a3bf0f13c8d6e83a7e/sdrf-pipelines-0.0.11.tar.gz (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.6), version: 0.0.11
2026-02-11T23:08:57,865   Skipping link: No binaries permitted for sdrf-pipelines: https://files.pythonhosted.org/packages/51/9b/39f6367e97865759a8094c257ece2ce4eff0f9779d74974149001c91c82d/sdrf_pipelines-0.0.11-py3-none-any.whl (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.6)
2026-02-11T23:08:57,866   Found link https://files.pythonhosted.org/packages/67/54/4c581387d7a4328fee4141098a8f4145d544c8fb7f016cdb39048d22e418/sdrf-pipelines-0.0.12.tar.gz (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.6), version: 0.0.12
2026-02-11T23:08:57,867   Skipping link: No binaries permitted for sdrf-pipelines: https://files.pythonhosted.org/packages/f5/23/0f13d3578fb3744409fdb51fff2b1e7de2f758d821171d84ebfc1ac7a439/sdrf_pipelines-0.0.12-py3-none-any.whl (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.6)
2026-02-11T23:08:57,868   Found link https://files.pythonhosted.org/packages/43/d9/ab63792284fb9f61d8890c6eabb94778d56a4addc112e2df0ac7f19ded51/sdrf-pipelines-0.0.13.tar.gz (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.6), version: 0.0.13
2026-02-11T23:08:57,869   Skipping link: No binaries permitted for sdrf-pipelines: https://files.pythonhosted.org/packages/34/3a/1236d570e949bb9b0ae8ba082beae9dc4b0b5a314667a07df77c1cb5e7d5/sdrf_pipelines-0.0.13-py3-none-any.whl (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.6)
2026-02-11T23:08:57,870   Found link https://files.pythonhosted.org/packages/8a/5d/7cddd816981eca0d61d943d6fc4f1ef11357d40ffa6d9c2db2bebb70a02a/sdrf-pipelines-0.0.14.tar.gz (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.6), version: 0.0.14
2026-02-11T23:08:57,870   Skipping link: No binaries permitted for sdrf-pipelines: https://files.pythonhosted.org/packages/dc/c3/2342d0c0b18aa1bf21f8a1d4ad044a119634699ae2bea6d9153e0907b43b/sdrf_pipelines-0.0.14-py3-none-any.whl (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.6)
2026-02-11T23:08:57,871   Found link https://files.pythonhosted.org/packages/df/12/8bb29f80b52752125bc3faa48feb7434b1dbf53b7fe537da0558be42ff1b/sdrf-pipelines-0.0.17.tar.gz (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.6), version: 0.0.17
2026-02-11T23:08:57,872   Skipping link: No binaries permitted for sdrf-pipelines: https://files.pythonhosted.org/packages/c3/9a/3a4761aafc8b383886b5f12663cf53614a696517417c054dbbb4abf6d478/sdrf_pipelines-0.0.17-py3-none-any.whl (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.6)
2026-02-11T23:08:57,873   Found link https://files.pythonhosted.org/packages/d1/e8/00832b63691fab282f27955b505a39f8c44c0fcf10983c62bb6c2d7b8ca9/sdrf-pipelines-0.0.18.tar.gz (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.6), version: 0.0.18
2026-02-11T23:08:57,873   Skipping link: No binaries permitted for sdrf-pipelines: https://files.pythonhosted.org/packages/40/f7/8f529dcf4e154883dbfe0c05195035bd539a3dfe6a1c50f6c55aec557c88/sdrf_pipelines-0.0.18-py3-none-any.whl (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.6)
2026-02-11T23:08:57,874   Found link https://files.pythonhosted.org/packages/42/de/e39e90461bb4f66d7522425f8cc17cb731b1a7c813d15b73e5bd96ff6679/sdrf-pipelines-0.0.19.tar.gz (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.6), version: 0.0.19
2026-02-11T23:08:57,875   Skipping link: No binaries permitted for sdrf-pipelines: https://files.pythonhosted.org/packages/c2/10/bac9828cbad07b9bd054cd785b992a628a8798a1da0f93ec7060309139fe/sdrf_pipelines-0.0.19-py3-none-any.whl (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.6)
2026-02-11T23:08:57,876   Found link https://files.pythonhosted.org/packages/b9/b5/c444a49662e9daec6ecf01dd90636a448770b8f69d281c352cb0582671a1/sdrf-pipelines-0.0.20.tar.gz (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.6), version: 0.0.20
2026-02-11T23:08:57,877   Skipping link: No binaries permitted for sdrf-pipelines: https://files.pythonhosted.org/packages/06/22/97635c47da50d79e93d66b54a9023a97790e71ad695b0c61e3b8d6ab2fb5/sdrf_pipelines-0.0.20-py3-none-any.whl (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.6)
2026-02-11T23:08:57,878   Found link https://files.pythonhosted.org/packages/96/5e/b8c87ff013d9c4d03e0a36bc726ccf9c6d6808a065ccfda4113649faf345/sdrf-pipelines-0.0.21.tar.gz (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.6), version: 0.0.21
2026-02-11T23:08:57,879   Skipping link: No binaries permitted for sdrf-pipelines: https://files.pythonhosted.org/packages/21/86/cc2489eff047cd368077923cbaef206c0cec153a3b7ee3a863b16285f1db/sdrf_pipelines-0.0.21-py3-none-any.whl (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.6)
2026-02-11T23:08:57,880   Found link https://files.pythonhosted.org/packages/5c/b3/00dd66e6efb1a8052272308e27eeaae0b38cfc19d65f5a0526c75f53f92b/sdrf-pipelines-0.0.22.tar.gz (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.6), version: 0.0.22
2026-02-11T23:08:57,880   Skipping link: No binaries permitted for sdrf-pipelines: https://files.pythonhosted.org/packages/32/00/dc82aa2c888ec26d98e7e39578fd335150f17363de6d8778a5f2f034b339/sdrf_pipelines-0.0.22-py3-none-any.whl (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.6)
2026-02-11T23:08:57,881   Found link https://files.pythonhosted.org/packages/11/3f/f576eab5c36346e329983f1aa95ac28bf91a4e8cb01b80d315afb7af6278/sdrf-pipelines-0.0.23.tar.gz (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.6), version: 0.0.23
2026-02-11T23:08:57,882   Skipping link: No binaries permitted for sdrf-pipelines: https://files.pythonhosted.org/packages/6d/9b/9440a025fa4954585e670bf2c00993f5be40dd42ddc75e659d6d098c30f8/sdrf_pipelines-0.0.23-py3-none-any.whl (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.6)
2026-02-11T23:08:57,883   Found link https://files.pythonhosted.org/packages/3f/8d/83d1901754e77a63acb324a62b693ad02939f6155506ba5307ac50e03cc5/sdrf-pipelines-0.0.24.tar.gz (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.8), version: 0.0.24
2026-02-11T23:08:57,883   Skipping link: No binaries permitted for sdrf-pipelines: https://files.pythonhosted.org/packages/49/e5/bb0678afc56876a0f38db7cddea6f9d38decfd7e11dc19dd035e2b8d5411/sdrf_pipelines-0.0.24-py3-none-any.whl (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.8)
2026-02-11T23:08:57,884   Found link https://files.pythonhosted.org/packages/c4/ab/5e381b011bfb6346d31e609a2338bf101693fceb7e0ce89bae783af05755/sdrf-pipelines-0.0.25.tar.gz (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.8), version: 0.0.25
2026-02-11T23:08:57,885   Skipping link: No binaries permitted for sdrf-pipelines: https://files.pythonhosted.org/packages/68/51/6f8034eb0e692b626f330f1a2b80414832cb03836fad38c079fdfa689c87/sdrf_pipelines-0.0.25-py3-none-any.whl (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.8)
2026-02-11T23:08:57,885   Found link https://files.pythonhosted.org/packages/c0/55/54680ffda1bda622da59fda0e402d4d818176b7004ba1f36a8fdfe2149fd/sdrf-pipelines-0.0.26.tar.gz (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.8), version: 0.0.26
2026-02-11T23:08:57,886   Skipping link: No binaries permitted for sdrf-pipelines: https://files.pythonhosted.org/packages/06/57/9c58c2b5b7424f5da60d4024b460d806d3b2155fea09bb2d84855170ad9c/sdrf_pipelines-0.0.26-py3-none-any.whl (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.8)
2026-02-11T23:08:57,887   Skipping link: No binaries permitted for sdrf-pipelines: https://files.pythonhosted.org/packages/cd/0c/0be59eb544870700b005d67777610fef2037333f667aafaff73025bd6430/sdrf_pipelines-0.0.27-py3-none-any.whl (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.8)
2026-02-11T23:08:57,888   Found link https://files.pythonhosted.org/packages/d7/bb/6ce3fa9aa0f9ee747322d966072fcd05addeba9ef892f38d9d020e6f0559/sdrf_pipelines-0.0.27.tar.gz (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.8), version: 0.0.27
2026-02-11T23:08:57,889   Skipping link: No binaries permitted for sdrf-pipelines: https://files.pythonhosted.org/packages/77/6b/b3697315a29c773e806671f6f48e5080e2c8c3815d272380eac5e8862529/sdrf_pipelines-0.0.28-py3-none-any.whl (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.8)
2026-02-11T23:08:57,889   Found link https://files.pythonhosted.org/packages/f2/be/4b6b65550de0a41c774dc0024624603bfb8bc67eb551f819cff256534b04/sdrf_pipelines-0.0.28.tar.gz (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.8), version: 0.0.28
2026-02-11T23:08:57,890   Skipping link: No binaries permitted for sdrf-pipelines: https://files.pythonhosted.org/packages/70/02/738df13eb1e276826c678fa9a6ca5afd917c27fc0ced85d2c9f4319ff1cd/sdrf_pipelines-0.0.29-py3-none-any.whl (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.8)
2026-02-11T23:08:57,891   Found link https://files.pythonhosted.org/packages/c4/cc/4bb960e01e45612c1de4cecdd574896cd5fea3398344dae06a95672dcd1f/sdrf_pipelines-0.0.29.tar.gz (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.8), version: 0.0.29
2026-02-11T23:08:57,892   Skipping link: No binaries permitted for sdrf-pipelines: https://files.pythonhosted.org/packages/fc/65/ebecbc58203385c8944565b87f01c23dfb231ac7f9f96c421b429ab4c7cd/sdrf_pipelines-0.0.30-py3-none-any.whl (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.8)
2026-02-11T23:08:57,893   Found link https://files.pythonhosted.org/packages/db/2a/149b55d0af61d69cbcc7af3fb1bfe03eff1d040432a01008d07641b45332/sdrf_pipelines-0.0.30.tar.gz (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.8), version: 0.0.30
2026-02-11T23:08:57,893   Skipping link: No binaries permitted for sdrf-pipelines: https://files.pythonhosted.org/packages/75/c1/de18b93761dec23a136fb0630041c46ab4a1d0f4077533b76ddcd4e69ce0/sdrf_pipelines-0.0.31-py3-none-any.whl (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.8)
2026-02-11T23:08:57,894   Found link https://files.pythonhosted.org/packages/0e/2c/f189b0412c848f82be2cab758b77725462100a817b370592c6ffea266afc/sdrf_pipelines-0.0.31.tar.gz (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.8), version: 0.0.31
2026-02-11T23:08:57,895   Skipping link: No binaries permitted for sdrf-pipelines: https://files.pythonhosted.org/packages/2f/6a/d73a6f569dec0234ae151b76adb82ee8862dcdc0ed9f1a1d6b62708954d5/sdrf_pipelines-0.0.32-py3-none-any.whl (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.8)
2026-02-11T23:08:57,896   Found link https://files.pythonhosted.org/packages/ee/fe/53d490135f513b348fb5bc4cd60624fab98777180bbd8d3e9fb9201676fb/sdrf_pipelines-0.0.32.tar.gz (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.8), version: 0.0.32
2026-02-11T23:08:57,896   Skipping link: No binaries permitted for sdrf-pipelines: https://files.pythonhosted.org/packages/21/db/dfe2259ba210a144cd34ec341b59491f28eb2a1e3e50cf29f69d9e55cc94/sdrf_pipelines-0.0.33-py3-none-any.whl (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.8)
2026-02-11T23:08:57,897   Found link https://files.pythonhosted.org/packages/bf/65/6e9a030c9393fa1e77859576b5ac9405528135278c7896bd06d6c60f25b2/sdrf_pipelines-0.0.33.tar.gz (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.8), version: 0.0.33
2026-02-11T23:08:57,898   Skipping link: No binaries permitted for sdrf-pipelines: https://files.pythonhosted.org/packages/d9/2c/45e3d66ea30c3c99c6eaef697cf78779e57e740a628aa8605d5982f87df2/sdrf_pipelines-0.1.0-py3-none-any.whl (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.10)
2026-02-11T23:08:57,899   Found link https://files.pythonhosted.org/packages/39/45/422cd793c4595bd2f29dfcce2c3d6fa131c92a21347313a4c7290d29de50/sdrf_pipelines-0.1.0.tar.gz (from https://pypi.org/simple/sdrf-pipelines/) (requires-python:>=3.10), version: 0.1.0
2026-02-11T23:08:57,900 Fetching project page and analyzing links: https://www.piwheels.org/simple/sdrf-pipelines/
2026-02-11T23:08:57,900 Getting page https://www.piwheels.org/simple/sdrf-pipelines/
2026-02-11T23:08:57,902 Found index url https://www.piwheels.org/simple
2026-02-11T23:08:58,060 Fetched page https://www.piwheels.org/simple/sdrf-pipelines/ as text/html
2026-02-11T23:08:58,070   Skipping link: No binaries permitted for sdrf-pipelines: https://www.piwheels.org/simple/sdrf-pipelines/sdrf_pipelines-0.0.33-py3-none-any.whl#sha256=28559532315d15959621a47b4ae5e5b3de2d7e9b7e7a82d4a95816bc8b244e32 (from https://www.piwheels.org/simple/sdrf-pipelines/) (requires-python:>=3.8)
2026-02-11T23:08:58,071   Skipping link: No binaries permitted for sdrf-pipelines: https://archive1.piwheels.org/simple/sdrf-pipelines/sdrf_pipelines-0.0.32-py3-none-any.whl#sha256=936fba244580cb0d517979a559a141ba4a4817a1c05a2cc6fc008d9e7a45bf1c (from https://www.piwheels.org/simple/sdrf-pipelines/) (requires-python:>=3.8)
2026-02-11T23:08:58,071   Skipping link: No binaries permitted for sdrf-pipelines: https://archive1.piwheels.org/simple/sdrf-pipelines/sdrf_pipelines-0.0.31-py3-none-any.whl#sha256=8161abdeb1070c00021f293ea7385cd7f4b04a53f10c9708472b8eebc86175af (from https://www.piwheels.org/simple/sdrf-pipelines/) (requires-python:>=3.8)
2026-02-11T23:08:58,072   Skipping link: No binaries permitted for sdrf-pipelines: https://archive1.piwheels.org/simple/sdrf-pipelines/sdrf_pipelines-0.0.30-py3-none-any.whl#sha256=00057af03d48925dac6d3fa0ed0b965edd614b9ed7afb0527462399419006c42 (from https://www.piwheels.org/simple/sdrf-pipelines/) (requires-python:>=3.8)
2026-02-11T23:08:58,073   Skipping link: No binaries permitted for sdrf-pipelines: https://archive1.piwheels.org/simple/sdrf-pipelines/sdrf_pipelines-0.0.29-py3-none-any.whl#sha256=37e3202e11f057755fe2840013e80388730b0b5b0b0f1c7fec6a734af46d81a5 (from https://www.piwheels.org/simple/sdrf-pipelines/) (requires-python:>=3.8)
2026-02-11T23:08:58,073   Skipping link: No binaries permitted for sdrf-pipelines: https://archive1.piwheels.org/simple/sdrf-pipelines/sdrf_pipelines-0.0.28-py3-none-any.whl#sha256=015dc211fdc6455bdd2353102bb91d978d88e610500d7a97b76217f6afb4be9a (from https://www.piwheels.org/simple/sdrf-pipelines/) (requires-python:>=3.8)
2026-02-11T23:08:58,074   Skipping link: No binaries permitted for sdrf-pipelines: https://archive1.piwheels.org/simple/sdrf-pipelines/sdrf_pipelines-0.0.27-py3-none-any.whl#sha256=d45c8e19c7eb5da855cf28a4556fdb10769ff518e526ed0f7fbf1ea79110ebc2 (from https://www.piwheels.org/simple/sdrf-pipelines/) (requires-python:>=3.8)
2026-02-11T23:08:58,074   Skipping link: No binaries permitted for sdrf-pipelines: https://archive1.piwheels.org/simple/sdrf-pipelines/sdrf_pipelines-0.0.26-py3-none-any.whl#sha256=e01937bab28f36f1cf00be1ff9771b616c7316ab680b68220354c370bd4a6e36 (from https://www.piwheels.org/simple/sdrf-pipelines/) (requires-python:>=3.8)
2026-02-11T23:08:58,075   Skipping link: No binaries permitted for sdrf-pipelines: https://archive1.piwheels.org/simple/sdrf-pipelines/sdrf_pipelines-0.0.25-py3-none-any.whl#sha256=d4145f4888e4b8c4df9a9353cb30046f35ee72259c3dbd4274fe3b8f83cf93d4 (from https://www.piwheels.org/simple/sdrf-pipelines/) (requires-python:>=3.8)
2026-02-11T23:08:58,075   Skipping link: No binaries permitted for sdrf-pipelines: https://archive1.piwheels.org/simple/sdrf-pipelines/sdrf_pipelines-0.0.24-py3-none-any.whl#sha256=2e2550c45f2cdaaaf2e63bf6ee3f163f5affe220034e95eb19a8cded2d46490f (from https://www.piwheels.org/simple/sdrf-pipelines/) (requires-python:>=3.8)
2026-02-11T23:08:58,076   Skipping link: No binaries permitted for sdrf-pipelines: https://archive1.piwheels.org/simple/sdrf-pipelines/sdrf_pipelines-0.0.23-py3-none-any.whl#sha256=1eaeb925a4629202441a40dc4bb1d3c74ede85760dd0fd0749fca1d300a51401 (from https://www.piwheels.org/simple/sdrf-pipelines/) (requires-python:>=3.6)
2026-02-11T23:08:58,077   Skipping link: No binaries permitted for sdrf-pipelines: https://archive1.piwheels.org/simple/sdrf-pipelines/sdrf_pipelines-0.0.22-py3-none-any.whl#sha256=8347b2bdc0da7befe534c78ab139e4b71c43292fcd15254bd662f99f0e16df91 (from https://www.piwheels.org/simple/sdrf-pipelines/) (requires-python:>=3.6)
2026-02-11T23:08:58,077   Skipping link: No binaries permitted for sdrf-pipelines: https://archive1.piwheels.org/simple/sdrf-pipelines/sdrf_pipelines-0.0.21-py3-none-any.whl#sha256=42cc6cba908e3d044ec52288f85776122667778476ac0a66c6567867731118a6 (from https://www.piwheels.org/simple/sdrf-pipelines/) (requires-python:>=3.6)
2026-02-11T23:08:58,078   Skipping link: No binaries permitted for sdrf-pipelines: https://archive1.piwheels.org/simple/sdrf-pipelines/sdrf_pipelines-0.0.20-py3-none-any.whl#sha256=1d11e2c9adf5b163481b3ab7893fb92cfa40cca426b81fe598a979fc099f12a3 (from https://www.piwheels.org/simple/sdrf-pipelines/) (requires-python:>=3.6)
2026-02-11T23:08:58,078   Skipping link: No binaries permitted for sdrf-pipelines: https://archive1.piwheels.org/simple/sdrf-pipelines/sdrf_pipelines-0.0.19-py3-none-any.whl#sha256=76fb931b7ef7c93bd93bc4e3ca4a52065fa321b24965acdf34ea258ed929e4ef (from https://www.piwheels.org/simple/sdrf-pipelines/) (requires-python:>=3.6)
2026-02-11T23:08:58,079   Skipping link: No binaries permitted for sdrf-pipelines: https://archive1.piwheels.org/simple/sdrf-pipelines/sdrf_pipelines-0.0.18-py3-none-any.whl#sha256=cdd273b759a3fcec99804b171aab99be290641f17bc1b7cb8890258d9f082589 (from https://www.piwheels.org/simple/sdrf-pipelines/) (requires-python:>=3.6)
2026-02-11T23:08:58,080   Skipping link: No binaries permitted for sdrf-pipelines: https://archive1.piwheels.org/simple/sdrf-pipelines/sdrf_pipelines-0.0.17-py3-none-any.whl#sha256=da7617969877ee9d58f9468ab01709f7f76b908688d0855cd06995aeca819acf (from https://www.piwheels.org/simple/sdrf-pipelines/) (requires-python:>=3.6)
2026-02-11T23:08:58,081   Skipping link: No binaries permitted for sdrf-pipelines: https://archive1.piwheels.org/simple/sdrf-pipelines/sdrf_pipelines-0.0.14-py3-none-any.whl#sha256=d2db52c5deaa3ef9d85328c01852355dc446ee0077ef98bfa2572a568aa451c6 (from https://www.piwheels.org/simple/sdrf-pipelines/) (requires-python:>=3.6)
2026-02-11T23:08:58,081   Skipping link: No binaries permitted for sdrf-pipelines: https://archive1.piwheels.org/simple/sdrf-pipelines/sdrf_pipelines-0.0.13-py3-none-any.whl#sha256=d9f4c46c0ba78873282e521831159b4dea4ae414c2b1c4ca3846655e51446102 (from https://www.piwheels.org/simple/sdrf-pipelines/) (requires-python:>=3.6)
2026-02-11T23:08:58,081   Skipping link: No binaries permitted for sdrf-pipelines: https://archive1.piwheels.org/simple/sdrf-pipelines/sdrf_pipelines-0.0.12-py3-none-any.whl#sha256=9f7664e451b6f6d69ef3ee950551f187c43a530cb6a58e9b04cf00cb3683d303 (from https://www.piwheels.org/simple/sdrf-pipelines/) (requires-python:>=3.6)
2026-02-11T23:08:58,082   Skipping link: No binaries permitted for sdrf-pipelines: https://archive1.piwheels.org/simple/sdrf-pipelines/sdrf_pipelines-0.0.11-py3-none-any.whl#sha256=bc5f0f3e5fa1f9741c37a0382c29668650f953b8db92be3220dd4b7207248a14 (from https://www.piwheels.org/simple/sdrf-pipelines/) (requires-python:>=3.6)
2026-02-11T23:08:58,082   Skipping link: No binaries permitted for sdrf-pipelines: https://archive1.piwheels.org/simple/sdrf-pipelines/sdrf_pipelines-0.0.10-py3-none-any.whl#sha256=996968fa2ec88a00b38b7765f4a7504e6f73dd66166ae3d961f2cb78f8a4a390 (from https://www.piwheels.org/simple/sdrf-pipelines/) (requires-python:>=3.6)
2026-02-11T23:08:58,083   Skipping link: No binaries permitted for sdrf-pipelines: https://archive1.piwheels.org/simple/sdrf-pipelines/sdrf_pipelines-0.0.9-py3-none-any.whl#sha256=44b09a5a8063a21c63ea54b4e7fc961218322f2885275002adaf8bd6f1c8f09d (from https://www.piwheels.org/simple/sdrf-pipelines/) (requires-python:>=3.6)
2026-02-11T23:08:58,084   Skipping link: No binaries permitted for sdrf-pipelines: https://archive1.piwheels.org/simple/sdrf-pipelines/sdrf_pipelines-0.0.8-py3-none-any.whl#sha256=833693dd2f2e6d740b48577e36f4cbe6fe50a7883f303fd90e511e26976b7058 (from https://www.piwheels.org/simple/sdrf-pipelines/) (requires-python:>=3.6)
2026-02-11T23:08:58,084   Skipping link: No binaries permitted for sdrf-pipelines: https://archive1.piwheels.org/simple/sdrf-pipelines/sdrf_pipelines-0.0.7-py3-none-any.whl#sha256=6bf0b2087e777cf91ba040d6ca9e73a82280add43acdb78382ea3e4e59f13708 (from https://www.piwheels.org/simple/sdrf-pipelines/) (requires-python:>=3.6)
2026-02-11T23:08:58,085   Skipping link: No binaries permitted for sdrf-pipelines: https://archive1.piwheels.org/simple/sdrf-pipelines/sdrf_pipelines-0.0.6-py3-none-any.whl#sha256=1b40cf99a08da15c9fdaa9500885d8959aa2a965a12321e66d8208d76bb92763 (from https://www.piwheels.org/simple/sdrf-pipelines/) (requires-python:>=3.6)
2026-02-11T23:08:58,086   Skipping link: No binaries permitted for sdrf-pipelines: https://archive1.piwheels.org/simple/sdrf-pipelines/sdrf_pipelines-0.0.5-py3-none-any.whl#sha256=216d9a4a9ac26396c4db638b3a3b895481f68563fd7f6d77c442a194faaa4c77 (from https://www.piwheels.org/simple/sdrf-pipelines/) (requires-python:>=3.5)
2026-02-11T23:08:58,086   Skipping link: No binaries permitted for sdrf-pipelines: https://archive1.piwheels.org/simple/sdrf-pipelines/sdrf_pipelines-0.0.4-py3-none-any.whl#sha256=c6423387fa9027f88c207430b4f5a0b2713edd07069b32270d5e132e63b8d6bc (from https://www.piwheels.org/simple/sdrf-pipelines/) (requires-python:>=3.5)
2026-02-11T23:08:58,087   Skipping link: No binaries permitted for sdrf-pipelines: https://archive1.piwheels.org/simple/sdrf-pipelines/sdrf_pipelines-0.0.3-py3-none-any.whl#sha256=e947682bc3e67d82cc945678c8068f82f511ceba05695fc6442dc8f920ca954b (from https://www.piwheels.org/simple/sdrf-pipelines/) (requires-python:>=3.5)
2026-02-11T23:08:58,088   Skipping link: No binaries permitted for sdrf-pipelines: https://archive1.piwheels.org/simple/sdrf-pipelines/sdrf_pipelines-0.0.2-py3-none-any.whl#sha256=44a856fe3a3448f7a3c99722d563211d5ea0282ffc0d04dc5525237008d27e84 (from https://www.piwheels.org/simple/sdrf-pipelines/) (requires-python:>=3.5)
2026-02-11T23:08:58,088   Skipping link: No binaries permitted for sdrf-pipelines: https://archive1.piwheels.org/simple/sdrf-pipelines/sdrf_pipelines-0.0.1-py3-none-any.whl#sha256=c368e9f0c66b6e46676b8aa423f07a797ddfd881c6f035a02c23d99f2aa55e54 (from https://www.piwheels.org/simple/sdrf-pipelines/) (requires-python:>=3.5)
2026-02-11T23:08:58,089 Skipping link: not a file: https://www.piwheels.org/simple/sdrf-pipelines/
2026-02-11T23:08:58,089 Skipping link: not a file: https://pypi.org/simple/sdrf-pipelines/
2026-02-11T23:08:58,113 Given no hashes to check 1 links for project 'sdrf-pipelines': discarding no candidates
2026-02-11T23:08:58,133 Collecting sdrf-pipelines==0.1.0
2026-02-11T23:08:58,135   Created temporary directory: /tmp/pip-unpack-itz4px4k
2026-02-11T23:08:58,432   Downloading sdrf_pipelines-0.1.0.tar.gz (33.2 MB)
2026-02-11T23:09:05,064   Added sdrf-pipelines==0.1.0 from https://files.pythonhosted.org/packages/39/45/422cd793c4595bd2f29dfcce2c3d6fa131c92a21347313a4c7290d29de50/sdrf_pipelines-0.1.0.tar.gz to build tracker '/tmp/pip-build-tracker-gh7kskfz'
2026-02-11T23:09:05,071   Created temporary directory: /tmp/pip-build-env-slu9e0_5
2026-02-11T23:09:05,076   Installing build dependencies: started
2026-02-11T23:09:05,077   Running command pip subprocess to install build dependencies
2026-02-11T23:09:06,217   Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11)
2026-02-11T23:09:06,839   DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-02-11T23:09:06,863   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-02-11T23:09:08,648   Collecting setuptools>=64
2026-02-11T23:09:08,668     Using cached setuptools-82.0.0-py3-none-any.whl (1.0 MB)
2026-02-11T23:09:09,045   Collecting setuptools-scm[toml]>=8
2026-02-11T23:09:09,063     Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-9.2.2-py3-none-any.whl (62 kB)
2026-02-11T23:09:09,259   Collecting packaging>=20
2026-02-11T23:09:09,277     Using cached https://www.piwheels.org/simple/packaging/packaging-26.0-py3-none-any.whl (74 kB)
2026-02-11T23:09:12,299   Installing collected packages: setuptools, packaging, setuptools-scm
2026-02-11T23:09:16,047     Creating /tmp/pip-build-env-slu9e0_5/overlay/local/bin
2026-02-11T23:09:16,049     changing mode of /tmp/pip-build-env-slu9e0_5/overlay/local/bin/setuptools-scm to 755
2026-02-11T23:09:16,072   Successfully installed packaging-26.0 setuptools-82.0.0 setuptools-scm-9.2.2
2026-02-11T23:09:16,369   Installing build dependencies: finished with status 'done'
2026-02-11T23:09:16,376   Getting requirements to build wheel: started
2026-02-11T23:09:16,377   Running command Getting requirements to build wheel
2026-02-11T23:09:17,023   toml section missing PosixPath('pyproject.toml') does not contain a tool.setuptools_scm section
2026-02-11T23:09:17,033   toml section missing PosixPath('pyproject.toml') does not contain a tool.setuptools_scm section
2026-02-11T23:09:17,194   running egg_info
2026-02-11T23:09:17,201   writing src/sdrf_pipelines.egg-info/PKG-INFO
2026-02-11T23:09:17,207   writing dependency_links to src/sdrf_pipelines.egg-info/dependency_links.txt
2026-02-11T23:09:17,209   writing entry points to src/sdrf_pipelines.egg-info/entry_points.txt
2026-02-11T23:09:17,211   writing requirements to src/sdrf_pipelines.egg-info/requires.txt
2026-02-11T23:09:17,212   writing top-level names to src/sdrf_pipelines.egg-info/top_level.txt
2026-02-11T23:09:17,326   listing git files failed - pretending there aren't any
2026-02-11T23:09:17,331   reading manifest file 'src/sdrf_pipelines.egg-info/SOURCES.txt'
2026-02-11T23:09:17,346   reading manifest template 'MANIFEST.in'
2026-02-11T23:09:17,347   adding license file 'LICENSE'
2026-02-11T23:09:17,355   writing manifest file 'src/sdrf_pipelines.egg-info/SOURCES.txt'
2026-02-11T23:09:17,455   Getting requirements to build wheel: finished with status 'done'
2026-02-11T23:09:17,458   Created temporary directory: /tmp/pip-modern-metadata-244kzf3a
2026-02-11T23:09:17,461   Preparing metadata (pyproject.toml): started
2026-02-11T23:09:17,462   Running command Preparing metadata (pyproject.toml)
2026-02-11T23:09:18,034   toml section missing PosixPath('pyproject.toml') does not contain a tool.setuptools_scm section
2026-02-11T23:09:18,044   toml section missing PosixPath('pyproject.toml') does not contain a tool.setuptools_scm section
2026-02-11T23:09:18,190   running dist_info
2026-02-11T23:09:18,203   creating /tmp/pip-modern-metadata-244kzf3a/sdrf_pipelines.egg-info
2026-02-11T23:09:18,204   writing /tmp/pip-modern-metadata-244kzf3a/sdrf_pipelines.egg-info/PKG-INFO
2026-02-11T23:09:18,209   writing dependency_links to /tmp/pip-modern-metadata-244kzf3a/sdrf_pipelines.egg-info/dependency_links.txt
2026-02-11T23:09:18,211   writing entry points to /tmp/pip-modern-metadata-244kzf3a/sdrf_pipelines.egg-info/entry_points.txt
2026-02-11T23:09:18,214   writing requirements to /tmp/pip-modern-metadata-244kzf3a/sdrf_pipelines.egg-info/requires.txt
2026-02-11T23:09:18,215   writing top-level names to /tmp/pip-modern-metadata-244kzf3a/sdrf_pipelines.egg-info/top_level.txt
2026-02-11T23:09:18,216   writing manifest file '/tmp/pip-modern-metadata-244kzf3a/sdrf_pipelines.egg-info/SOURCES.txt'
2026-02-11T23:09:18,306   listing git files failed - pretending there aren't any
2026-02-11T23:09:18,310   reading manifest file '/tmp/pip-modern-metadata-244kzf3a/sdrf_pipelines.egg-info/SOURCES.txt'
2026-02-11T23:09:18,312   reading manifest template 'MANIFEST.in'
2026-02-11T23:09:18,313   adding license file 'LICENSE'
2026-02-11T23:09:18,318   writing manifest file '/tmp/pip-modern-metadata-244kzf3a/sdrf_pipelines.egg-info/SOURCES.txt'
2026-02-11T23:09:18,319   creating '/tmp/pip-modern-metadata-244kzf3a/sdrf_pipelines-0.1.0.dist-info'
2026-02-11T23:09:18,448   Preparing metadata (pyproject.toml): finished with status 'done'
2026-02-11T23:09:18,452   Source in /tmp/pip-wheel-ljstks3a/sdrf-pipelines_480fe4ca870348118f2f143a7cbb035a has version 0.1.0, which satisfies requirement sdrf-pipelines==0.1.0 from https://files.pythonhosted.org/packages/39/45/422cd793c4595bd2f29dfcce2c3d6fa131c92a21347313a4c7290d29de50/sdrf_pipelines-0.1.0.tar.gz
2026-02-11T23:09:18,453   Removed sdrf-pipelines==0.1.0 from https://files.pythonhosted.org/packages/39/45/422cd793c4595bd2f29dfcce2c3d6fa131c92a21347313a4c7290d29de50/sdrf_pipelines-0.1.0.tar.gz from build tracker '/tmp/pip-build-tracker-gh7kskfz'
2026-02-11T23:09:18,459 Created temporary directory: /tmp/pip-unpack-5slmr9xl
2026-02-11T23:09:18,460 Building wheels for collected packages: sdrf-pipelines
2026-02-11T23:09:18,464   Created temporary directory: /tmp/pip-wheel-up1lsyap
2026-02-11T23:09:18,465   Destination directory: /tmp/pip-wheel-up1lsyap
2026-02-11T23:09:18,470   Building wheel for sdrf-pipelines (pyproject.toml): started
2026-02-11T23:09:18,471   Running command Building wheel for sdrf-pipelines (pyproject.toml)
2026-02-11T23:09:19,028   toml section missing PosixPath('pyproject.toml') does not contain a tool.setuptools_scm section
2026-02-11T23:09:19,039   toml section missing PosixPath('pyproject.toml') does not contain a tool.setuptools_scm section
2026-02-11T23:09:19,173   running bdist_wheel
2026-02-11T23:09:19,195   running build
2026-02-11T23:09:19,196   running build_py
2026-02-11T23:09:19,203   creating build/lib/sdrf_pipelines
2026-02-11T23:09:19,205   copying src/sdrf_pipelines/_version.py -> build/lib/sdrf_pipelines
2026-02-11T23:09:19,207   copying src/sdrf_pipelines/parse_sdrf.py -> build/lib/sdrf_pipelines
2026-02-11T23:09:19,209   copying src/sdrf_pipelines/__init__.py -> build/lib/sdrf_pipelines
2026-02-11T23:09:19,211   copying src/sdrf_pipelines/config.py -> build/lib/sdrf_pipelines
2026-02-11T23:09:19,213   creating build/lib/sdrf_pipelines/ols
2026-02-11T23:09:19,214   copying src/sdrf_pipelines/ols/__init__.py -> build/lib/sdrf_pipelines/ols
2026-02-11T23:09:19,216   copying src/sdrf_pipelines/ols/ols.py -> build/lib/sdrf_pipelines/ols
2026-02-11T23:09:19,219   creating build/lib/sdrf_pipelines/converters
2026-02-11T23:09:19,220   copying src/sdrf_pipelines/converters/__init__.py -> build/lib/sdrf_pipelines/converters
2026-02-11T23:09:19,222   copying src/sdrf_pipelines/converters/base.py -> build/lib/sdrf_pipelines/converters
2026-02-11T23:09:19,225   creating build/lib/sdrf_pipelines/utils
2026-02-11T23:09:19,226   copying src/sdrf_pipelines/utils/__init__.py -> build/lib/sdrf_pipelines/utils
2026-02-11T23:09:19,228   copying src/sdrf_pipelines/utils/error_codes.py -> build/lib/sdrf_pipelines/utils
2026-02-11T23:09:19,230   copying src/sdrf_pipelines/utils/manifest.py -> build/lib/sdrf_pipelines/utils
2026-02-11T23:09:19,233   copying src/sdrf_pipelines/utils/exceptions.py -> build/lib/sdrf_pipelines/utils
2026-02-11T23:09:19,235   copying src/sdrf_pipelines/utils/utils.py -> build/lib/sdrf_pipelines/utils
2026-02-11T23:09:19,238   creating build/lib/sdrf_pipelines/sdrf
2026-02-11T23:09:19,239   copying src/sdrf_pipelines/sdrf/validators.py -> build/lib/sdrf_pipelines/sdrf
2026-02-11T23:09:19,242   copying src/sdrf_pipelines/sdrf/__init__.py -> build/lib/sdrf_pipelines/sdrf
2026-02-11T23:09:19,243   copying src/sdrf_pipelines/sdrf/sdrf.py -> build/lib/sdrf_pipelines/sdrf
2026-02-11T23:09:19,246   copying src/sdrf_pipelines/sdrf/specification.py -> build/lib/sdrf_pipelines/sdrf
2026-02-11T23:09:19,248   creating build/lib/sdrf_pipelines/converters/openms
2026-02-11T23:09:19,249   copying src/sdrf_pipelines/converters/openms/__init__.py -> build/lib/sdrf_pipelines/converters/openms
2026-02-11T23:09:19,252   copying src/sdrf_pipelines/converters/openms/modifications.py -> build/lib/sdrf_pipelines/converters/openms
2026-02-11T23:09:19,254   copying src/sdrf_pipelines/converters/openms/unimod.py -> build/lib/sdrf_pipelines/converters/openms
2026-02-11T23:09:19,256   copying src/sdrf_pipelines/converters/openms/constants.py -> build/lib/sdrf_pipelines/converters/openms
2026-02-11T23:09:19,258   copying src/sdrf_pipelines/converters/openms/utils.py -> build/lib/sdrf_pipelines/converters/openms
2026-02-11T23:09:19,260   copying src/sdrf_pipelines/converters/openms/openms.py -> build/lib/sdrf_pipelines/converters/openms
2026-02-11T23:09:19,263   copying src/sdrf_pipelines/converters/openms/experimental_design.py -> build/lib/sdrf_pipelines/converters/openms
2026-02-11T23:09:19,266   creating build/lib/sdrf_pipelines/converters/maxquant
2026-02-11T23:09:19,267   copying src/sdrf_pipelines/converters/maxquant/__init__.py -> build/lib/sdrf_pipelines/converters/maxquant
2026-02-11T23:09:19,269   copying src/sdrf_pipelines/converters/maxquant/maxquant.py -> build/lib/sdrf_pipelines/converters/maxquant
2026-02-11T23:09:19,275   creating build/lib/sdrf_pipelines/converters/normalyzerde
2026-02-11T23:09:19,277   copying src/sdrf_pipelines/converters/normalyzerde/__init__.py -> build/lib/sdrf_pipelines/converters/normalyzerde
2026-02-11T23:09:19,278   copying src/sdrf_pipelines/converters/normalyzerde/normalyzerde.py -> build/lib/sdrf_pipelines/converters/normalyzerde
2026-02-11T23:09:19,281   creating build/lib/sdrf_pipelines/converters/msstats
2026-02-11T23:09:19,282   copying src/sdrf_pipelines/converters/msstats/__init__.py -> build/lib/sdrf_pipelines/converters/msstats
2026-02-11T23:09:19,284   copying src/sdrf_pipelines/converters/msstats/msstats.py -> build/lib/sdrf_pipelines/converters/msstats
2026-02-11T23:09:19,287   creating build/lib/sdrf_pipelines/sdrf/schemas
2026-02-11T23:09:19,287   copying src/sdrf_pipelines/sdrf/schemas/__init__.py -> build/lib/sdrf_pipelines/sdrf/schemas
2026-02-11T23:09:19,289   copying src/sdrf_pipelines/sdrf/schemas/models.py -> build/lib/sdrf_pipelines/sdrf/schemas
2026-02-11T23:09:19,291   copying src/sdrf_pipelines/sdrf/schemas/registry.py -> build/lib/sdrf_pipelines/sdrf/schemas
2026-02-11T23:09:19,293   copying src/sdrf_pipelines/sdrf/schemas/validator.py -> build/lib/sdrf_pipelines/sdrf/schemas
2026-02-11T23:09:19,296   copying src/sdrf_pipelines/sdrf/schemas/utils.py -> build/lib/sdrf_pipelines/sdrf/schemas
2026-02-11T23:09:19,302   creating build/lib/sdrf_pipelines/sdrf/sdrf-templates/scripts
2026-02-11T23:09:19,304   copying src/sdrf_pipelines/sdrf/sdrf-templates/scripts/generate_manifest.py -> build/lib/sdrf_pipelines/sdrf/sdrf-templates/scripts
2026-02-11T23:09:19,310   running egg_info
2026-02-11T23:09:19,324   writing src/sdrf_pipelines.egg-info/PKG-INFO
2026-02-11T23:09:19,329   writing dependency_links to src/sdrf_pipelines.egg-info/dependency_links.txt
2026-02-11T23:09:19,331   writing entry points to src/sdrf_pipelines.egg-info/entry_points.txt
2026-02-11T23:09:19,333   writing requirements to src/sdrf_pipelines.egg-info/requires.txt
2026-02-11T23:09:19,334   writing top-level names to src/sdrf_pipelines.egg-info/top_level.txt
2026-02-11T23:09:19,414   listing git files failed - pretending there aren't any
2026-02-11T23:09:19,418   reading manifest file 'src/sdrf_pipelines.egg-info/SOURCES.txt'
2026-02-11T23:09:19,427   reading manifest template 'MANIFEST.in'
2026-02-11T23:09:19,428   adding license file 'LICENSE'
2026-02-11T23:09:19,436   writing manifest file 'src/sdrf_pipelines.egg-info/SOURCES.txt'
2026-02-11T23:09:19,482   copying src/sdrf_pipelines/openms.tsv -> build/lib/sdrf_pipelines
2026-02-11T23:09:19,492   copying src/sdrf_pipelines/sdrf/sdrf-templates/templates.yaml -> build/lib/sdrf_pipelines/sdrf/sdrf-templates
2026-02-11T23:09:19,494   creating build/lib/sdrf_pipelines/sdrf/sdrf-templates/affinity-proteomics/1.1.0
2026-02-11T23:09:19,496   copying src/sdrf_pipelines/sdrf/sdrf-templates/affinity-proteomics/1.1.0/affinity-proteomics.yaml -> build/lib/sdrf_pipelines/sdrf/sdrf-templates/affinity-proteomics/1.1.0
2026-02-11T23:09:19,498   creating build/lib/sdrf_pipelines/sdrf/sdrf-templates/dda-acquisition/1.1.0
2026-02-11T23:09:19,500   copying src/sdrf_pipelines/sdrf/sdrf-templates/dda-acquisition/1.1.0/dda-acquisition.yaml -> build/lib/sdrf_pipelines/sdrf/sdrf-templates/dda-acquisition/1.1.0
2026-02-11T23:09:19,503   creating build/lib/sdrf_pipelines/sdrf/sdrf-templates/immunopeptidomics/1.0.0-dev
2026-02-11T23:09:19,504   copying src/sdrf_pipelines/sdrf/sdrf-templates/immunopeptidomics/1.0.0-dev/immunopeptidomics.yaml -> build/lib/sdrf_pipelines/sdrf/sdrf-templates/immunopeptidomics/1.0.0-dev
2026-02-11T23:09:19,507   creating build/lib/sdrf_pipelines/sdrf/sdrf-templates/metaproteomics/1.0.0-dev
2026-02-11T23:09:19,508   copying src/sdrf_pipelines/sdrf/sdrf-templates/metaproteomics/1.0.0-dev/metaproteomics.yaml -> build/lib/sdrf_pipelines/sdrf/sdrf-templates/metaproteomics/1.0.0-dev
2026-02-11T23:09:19,511   creating build/lib/sdrf_pipelines/sdrf/sdrf-templates/dia-acquisition/1.1.0
2026-02-11T23:09:19,512   copying src/sdrf_pipelines/sdrf/sdrf-templates/dia-acquisition/1.1.0/dia-acquisition.yaml -> build/lib/sdrf_pipelines/sdrf/sdrf-templates/dia-acquisition/1.1.0
2026-02-11T23:09:19,515   creating build/lib/sdrf_pipelines/sdrf/sdrf-templates/vertebrates/1.1.0
2026-02-11T23:09:19,517   copying src/sdrf_pipelines/sdrf/sdrf-templates/vertebrates/1.1.0/vertebrates.yaml -> build/lib/sdrf_pipelines/sdrf/sdrf-templates/vertebrates/1.1.0
2026-02-11T23:09:19,519   creating build/lib/sdrf_pipelines/sdrf/sdrf-templates/single-cell/1.0.0
2026-02-11T23:09:19,520   copying src/sdrf_pipelines/sdrf/sdrf-templates/single-cell/1.0.0/single-cell.yaml -> build/lib/sdrf_pipelines/sdrf/sdrf-templates/single-cell/1.0.0
2026-02-11T23:09:19,523   creating build/lib/sdrf_pipelines/sdrf/sdrf-templates/invertebrates/1.1.0
2026-02-11T23:09:19,525   copying src/sdrf_pipelines/sdrf/sdrf-templates/invertebrates/1.1.0/invertebrates.yaml -> build/lib/sdrf_pipelines/sdrf/sdrf-templates/invertebrates/1.1.0
2026-02-11T23:09:19,527   creating build/lib/sdrf_pipelines/sdrf/sdrf-templates/crosslinking/1.1.0
2026-02-11T23:09:19,529   copying src/sdrf_pipelines/sdrf/sdrf-templates/crosslinking/1.1.0/crosslinking.yaml -> build/lib/sdrf_pipelines/sdrf/sdrf-templates/crosslinking/1.1.0
2026-02-11T23:09:19,531   creating build/lib/sdrf_pipelines/sdrf/sdrf-templates/ms-proteomics/1.1.0
2026-02-11T23:09:19,533   copying src/sdrf_pipelines/sdrf/sdrf-templates/ms-proteomics/1.1.0/ms-proteomics.yaml -> build/lib/sdrf_pipelines/sdrf/sdrf-templates/ms-proteomics/1.1.0
2026-02-11T23:09:19,535   creating build/lib/sdrf_pipelines/sdrf/sdrf-templates/human/1.1.0
2026-02-11T23:09:19,536   copying src/sdrf_pipelines/sdrf/sdrf-templates/human/1.1.0/human.yaml -> build/lib/sdrf_pipelines/sdrf/sdrf-templates/human/1.1.0
2026-02-11T23:09:19,539   creating build/lib/sdrf_pipelines/sdrf/sdrf-templates/cell-lines/1.1.0
2026-02-11T23:09:19,540   copying src/sdrf_pipelines/sdrf/sdrf-templates/cell-lines/1.1.0/cell-lines.yaml -> build/lib/sdrf_pipelines/sdrf/sdrf-templates/cell-lines/1.1.0
2026-02-11T23:09:19,542   creating build/lib/sdrf_pipelines/sdrf/sdrf-templates/base/1.1.0
2026-02-11T23:09:19,544   copying src/sdrf_pipelines/sdrf/sdrf-templates/base/1.1.0/base.yaml -> build/lib/sdrf_pipelines/sdrf/sdrf-templates/base/1.1.0
2026-02-11T23:09:19,547   creating build/lib/sdrf_pipelines/sdrf/sdrf-templates/somascan/1.0.0
2026-02-11T23:09:19,548   copying src/sdrf_pipelines/sdrf/sdrf-templates/somascan/1.0.0/somascan.yaml -> build/lib/sdrf_pipelines/sdrf/sdrf-templates/somascan/1.0.0
2026-02-11T23:09:19,551   creating build/lib/sdrf_pipelines/sdrf/sdrf-templates/olink/1.0.0
2026-02-11T23:09:19,552   copying src/sdrf_pipelines/sdrf/sdrf-templates/olink/1.0.0/olink.yaml -> build/lib/sdrf_pipelines/sdrf/sdrf-templates/olink/1.0.0
2026-02-11T23:09:19,555   creating build/lib/sdrf_pipelines/sdrf/sdrf-templates/plants/1.1.0
2026-02-11T23:09:19,556   copying src/sdrf_pipelines/sdrf/sdrf-templates/plants/1.1.0/plants.yaml -> build/lib/sdrf_pipelines/sdrf/sdrf-templates/plants/1.1.0
2026-02-11T23:09:19,559   copying src/sdrf_pipelines/converters/openms/unimod.xml -> build/lib/sdrf_pipelines/converters/openms
2026-02-11T23:09:19,596   copying src/sdrf_pipelines/converters/maxquant/modifications.xml -> build/lib/sdrf_pipelines/converters/maxquant
2026-02-11T23:09:19,605   copying src/sdrf_pipelines/converters/maxquant/param2sdrf.yml -> build/lib/sdrf_pipelines/converters/maxquant
2026-02-11T23:09:19,635   installing to build/bdist.linux-armv7l/wheel
2026-02-11T23:09:19,636   running install
2026-02-11T23:09:19,660   running install_lib
2026-02-11T23:09:19,667   creating build/bdist.linux-armv7l/wheel
2026-02-11T23:09:19,670   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines
2026-02-11T23:09:19,671   copying build/lib/sdrf_pipelines/_version.py -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines
2026-02-11T23:09:19,673   copying build/lib/sdrf_pipelines/parse_sdrf.py -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines
2026-02-11T23:09:19,677   copying build/lib/sdrf_pipelines/__init__.py -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines
2026-02-11T23:09:19,679   copying build/lib/sdrf_pipelines/config.py -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines
2026-02-11T23:09:19,682   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines/ols
2026-02-11T23:09:19,683   copying build/lib/sdrf_pipelines/ols/__init__.py -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/ols
2026-02-11T23:09:19,685   copying build/lib/sdrf_pipelines/ols/ols.py -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/ols
2026-02-11T23:09:19,688   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines/converters
2026-02-11T23:09:19,690   copying build/lib/sdrf_pipelines/converters/__init__.py -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/converters
2026-02-11T23:09:19,693   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines/converters/openms
2026-02-11T23:09:19,694   copying build/lib/sdrf_pipelines/converters/openms/__init__.py -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/converters/openms
2026-02-11T23:09:19,696   copying build/lib/sdrf_pipelines/converters/openms/modifications.py -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/converters/openms
2026-02-11T23:09:19,698   copying build/lib/sdrf_pipelines/converters/openms/unimod.py -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/converters/openms
2026-02-11T23:09:19,701   copying build/lib/sdrf_pipelines/converters/openms/unimod.xml -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/converters/openms
2026-02-11T23:09:19,737   copying build/lib/sdrf_pipelines/converters/openms/constants.py -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/converters/openms
2026-02-11T23:09:19,739   copying build/lib/sdrf_pipelines/converters/openms/utils.py -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/converters/openms
2026-02-11T23:09:19,742   copying build/lib/sdrf_pipelines/converters/openms/openms.py -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/converters/openms
2026-02-11T23:09:19,744   copying build/lib/sdrf_pipelines/converters/openms/experimental_design.py -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/converters/openms
2026-02-11T23:09:19,747   copying build/lib/sdrf_pipelines/converters/base.py -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/converters
2026-02-11T23:09:19,749   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines/converters/maxquant
2026-02-11T23:09:19,751   copying build/lib/sdrf_pipelines/converters/maxquant/__init__.py -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/converters/maxquant
2026-02-11T23:09:19,752   copying build/lib/sdrf_pipelines/converters/maxquant/param2sdrf.yml -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/converters/maxquant
2026-02-11T23:09:19,754   copying build/lib/sdrf_pipelines/converters/maxquant/modifications.xml -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/converters/maxquant
2026-02-11T23:09:19,762   copying build/lib/sdrf_pipelines/converters/maxquant/maxquant.py -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/converters/maxquant
2026-02-11T23:09:19,767   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines/converters/normalyzerde
2026-02-11T23:09:19,768   copying build/lib/sdrf_pipelines/converters/normalyzerde/__init__.py -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/converters/normalyzerde
2026-02-11T23:09:19,769   copying build/lib/sdrf_pipelines/converters/normalyzerde/normalyzerde.py -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/converters/normalyzerde
2026-02-11T23:09:19,772   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines/converters/msstats
2026-02-11T23:09:19,773   copying build/lib/sdrf_pipelines/converters/msstats/__init__.py -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/converters/msstats
2026-02-11T23:09:19,775   copying build/lib/sdrf_pipelines/converters/msstats/msstats.py -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/converters/msstats
2026-02-11T23:09:19,778   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines/utils
2026-02-11T23:09:19,779   copying build/lib/sdrf_pipelines/utils/__init__.py -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/utils
2026-02-11T23:09:19,781   copying build/lib/sdrf_pipelines/utils/error_codes.py -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/utils
2026-02-11T23:09:19,783   copying build/lib/sdrf_pipelines/utils/manifest.py -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/utils
2026-02-11T23:09:19,786   copying build/lib/sdrf_pipelines/utils/exceptions.py -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/utils
2026-02-11T23:09:19,788   copying build/lib/sdrf_pipelines/utils/utils.py -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/utils
2026-02-11T23:09:19,791   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines/sdrf
2026-02-11T23:09:19,792   copying build/lib/sdrf_pipelines/sdrf/validators.py -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/sdrf
2026-02-11T23:09:19,795   copying build/lib/sdrf_pipelines/sdrf/__init__.py -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/sdrf
2026-02-11T23:09:19,797   copying build/lib/sdrf_pipelines/sdrf/sdrf.py -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/sdrf
2026-02-11T23:09:19,800   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines/sdrf/sdrf-templates
2026-02-11T23:09:19,801   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines/sdrf/sdrf-templates/affinity-proteomics
2026-02-11T23:09:19,803   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines/sdrf/sdrf-templates/affinity-proteomics/1.1.0
2026-02-11T23:09:19,804   copying build/lib/sdrf_pipelines/sdrf/sdrf-templates/affinity-proteomics/1.1.0/affinity-proteomics.yaml -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/sdrf/sdrf-templates/affinity-proteomics/1.1.0
2026-02-11T23:09:19,807   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines/sdrf/sdrf-templates/dda-acquisition
2026-02-11T23:09:19,808   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines/sdrf/sdrf-templates/dda-acquisition/1.1.0
2026-02-11T23:09:19,809   copying build/lib/sdrf_pipelines/sdrf/sdrf-templates/dda-acquisition/1.1.0/dda-acquisition.yaml -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/sdrf/sdrf-templates/dda-acquisition/1.1.0
2026-02-11T23:09:19,812   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines/sdrf/sdrf-templates/immunopeptidomics
2026-02-11T23:09:19,813   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines/sdrf/sdrf-templates/immunopeptidomics/1.0.0-dev
2026-02-11T23:09:19,815   copying build/lib/sdrf_pipelines/sdrf/sdrf-templates/immunopeptidomics/1.0.0-dev/immunopeptidomics.yaml -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/sdrf/sdrf-templates/immunopeptidomics/1.0.0-dev
2026-02-11T23:09:19,817   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines/sdrf/sdrf-templates/metaproteomics
2026-02-11T23:09:19,819   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines/sdrf/sdrf-templates/metaproteomics/1.0.0-dev
2026-02-11T23:09:19,820   copying build/lib/sdrf_pipelines/sdrf/sdrf-templates/metaproteomics/1.0.0-dev/metaproteomics.yaml -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/sdrf/sdrf-templates/metaproteomics/1.0.0-dev
2026-02-11T23:09:19,822   copying build/lib/sdrf_pipelines/sdrf/sdrf-templates/templates.yaml -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/sdrf/sdrf-templates
2026-02-11T23:09:19,825   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines/sdrf/sdrf-templates/dia-acquisition
2026-02-11T23:09:19,826   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines/sdrf/sdrf-templates/dia-acquisition/1.1.0
2026-02-11T23:09:19,828   copying build/lib/sdrf_pipelines/sdrf/sdrf-templates/dia-acquisition/1.1.0/dia-acquisition.yaml -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/sdrf/sdrf-templates/dia-acquisition/1.1.0
2026-02-11T23:09:19,831   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines/sdrf/sdrf-templates/vertebrates
2026-02-11T23:09:19,832   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines/sdrf/sdrf-templates/vertebrates/1.1.0
2026-02-11T23:09:19,834   copying build/lib/sdrf_pipelines/sdrf/sdrf-templates/vertebrates/1.1.0/vertebrates.yaml -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/sdrf/sdrf-templates/vertebrates/1.1.0
2026-02-11T23:09:19,836   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines/sdrf/sdrf-templates/single-cell
2026-02-11T23:09:19,838   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines/sdrf/sdrf-templates/single-cell/1.0.0
2026-02-11T23:09:19,839   copying build/lib/sdrf_pipelines/sdrf/sdrf-templates/single-cell/1.0.0/single-cell.yaml -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/sdrf/sdrf-templates/single-cell/1.0.0
2026-02-11T23:09:19,842   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines/sdrf/sdrf-templates/scripts
2026-02-11T23:09:19,843   copying build/lib/sdrf_pipelines/sdrf/sdrf-templates/scripts/generate_manifest.py -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/sdrf/sdrf-templates/scripts
2026-02-11T23:09:19,846   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines/sdrf/sdrf-templates/invertebrates
2026-02-11T23:09:19,847   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines/sdrf/sdrf-templates/invertebrates/1.1.0
2026-02-11T23:09:19,849   copying build/lib/sdrf_pipelines/sdrf/sdrf-templates/invertebrates/1.1.0/invertebrates.yaml -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/sdrf/sdrf-templates/invertebrates/1.1.0
2026-02-11T23:09:19,851   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines/sdrf/sdrf-templates/crosslinking
2026-02-11T23:09:19,852   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines/sdrf/sdrf-templates/crosslinking/1.1.0
2026-02-11T23:09:19,854   copying build/lib/sdrf_pipelines/sdrf/sdrf-templates/crosslinking/1.1.0/crosslinking.yaml -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/sdrf/sdrf-templates/crosslinking/1.1.0
2026-02-11T23:09:19,856   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines/sdrf/sdrf-templates/ms-proteomics
2026-02-11T23:09:19,858   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines/sdrf/sdrf-templates/ms-proteomics/1.1.0
2026-02-11T23:09:19,859   copying build/lib/sdrf_pipelines/sdrf/sdrf-templates/ms-proteomics/1.1.0/ms-proteomics.yaml -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/sdrf/sdrf-templates/ms-proteomics/1.1.0
2026-02-11T23:09:19,861   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines/sdrf/sdrf-templates/human
2026-02-11T23:09:19,863   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines/sdrf/sdrf-templates/human/1.1.0
2026-02-11T23:09:19,864   copying build/lib/sdrf_pipelines/sdrf/sdrf-templates/human/1.1.0/human.yaml -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/sdrf/sdrf-templates/human/1.1.0
2026-02-11T23:09:19,867   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines/sdrf/sdrf-templates/cell-lines
2026-02-11T23:09:19,868   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines/sdrf/sdrf-templates/cell-lines/1.1.0
2026-02-11T23:09:19,870   copying build/lib/sdrf_pipelines/sdrf/sdrf-templates/cell-lines/1.1.0/cell-lines.yaml -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/sdrf/sdrf-templates/cell-lines/1.1.0
2026-02-11T23:09:19,872   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines/sdrf/sdrf-templates/base
2026-02-11T23:09:19,873   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines/sdrf/sdrf-templates/base/1.1.0
2026-02-11T23:09:19,875   copying build/lib/sdrf_pipelines/sdrf/sdrf-templates/base/1.1.0/base.yaml -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/sdrf/sdrf-templates/base/1.1.0
2026-02-11T23:09:19,878   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines/sdrf/sdrf-templates/somascan
2026-02-11T23:09:19,879   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines/sdrf/sdrf-templates/somascan/1.0.0
2026-02-11T23:09:19,880   copying build/lib/sdrf_pipelines/sdrf/sdrf-templates/somascan/1.0.0/somascan.yaml -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/sdrf/sdrf-templates/somascan/1.0.0
2026-02-11T23:09:19,883   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines/sdrf/sdrf-templates/olink
2026-02-11T23:09:19,884   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines/sdrf/sdrf-templates/olink/1.0.0
2026-02-11T23:09:19,886   copying build/lib/sdrf_pipelines/sdrf/sdrf-templates/olink/1.0.0/olink.yaml -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/sdrf/sdrf-templates/olink/1.0.0
2026-02-11T23:09:19,888   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines/sdrf/sdrf-templates/plants
2026-02-11T23:09:19,890   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines/sdrf/sdrf-templates/plants/1.1.0
2026-02-11T23:09:19,891   copying build/lib/sdrf_pipelines/sdrf/sdrf-templates/plants/1.1.0/plants.yaml -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/sdrf/sdrf-templates/plants/1.1.0
2026-02-11T23:09:19,893   copying build/lib/sdrf_pipelines/sdrf/specification.py -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/sdrf
2026-02-11T23:09:19,895   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines/sdrf/schemas
2026-02-11T23:09:19,896   copying build/lib/sdrf_pipelines/sdrf/schemas/__init__.py -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/sdrf/schemas
2026-02-11T23:09:19,898   copying build/lib/sdrf_pipelines/sdrf/schemas/models.py -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/sdrf/schemas
2026-02-11T23:09:19,900   copying build/lib/sdrf_pipelines/sdrf/schemas/registry.py -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/sdrf/schemas
2026-02-11T23:09:19,903   copying build/lib/sdrf_pipelines/sdrf/schemas/validator.py -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/sdrf/schemas
2026-02-11T23:09:19,905   copying build/lib/sdrf_pipelines/sdrf/schemas/utils.py -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines/sdrf/schemas
2026-02-11T23:09:19,907   copying build/lib/sdrf_pipelines/openms.tsv -> build/bdist.linux-armv7l/wheel/./sdrf_pipelines
2026-02-11T23:09:19,915   running install_egg_info
2026-02-11T23:09:19,921   Copying src/sdrf_pipelines.egg-info to build/bdist.linux-armv7l/wheel/./sdrf_pipelines-0.1.0-py3.11.egg-info
2026-02-11T23:09:19,932   running install_scripts
2026-02-11T23:09:19,944   creating build/bdist.linux-armv7l/wheel/sdrf_pipelines-0.1.0.dist-info/WHEEL
2026-02-11T23:09:19,947   creating '/tmp/pip-wheel-up1lsyap/.tmp-6d9mfo9x/sdrf_pipelines-0.1.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2026-02-11T23:09:19,949   adding 'sdrf_pipelines/__init__.py'
2026-02-11T23:09:19,950   adding 'sdrf_pipelines/_version.py'
2026-02-11T23:09:19,952   adding 'sdrf_pipelines/config.py'
2026-02-11T23:09:19,985   adding 'sdrf_pipelines/openms.tsv'
2026-02-11T23:09:19,990   adding 'sdrf_pipelines/parse_sdrf.py'
2026-02-11T23:09:19,992   adding 'sdrf_pipelines/converters/__init__.py'
2026-02-11T23:09:19,994   adding 'sdrf_pipelines/converters/base.py'
2026-02-11T23:09:19,996   adding 'sdrf_pipelines/converters/maxquant/__init__.py'
2026-02-11T23:09:20,006   adding 'sdrf_pipelines/converters/maxquant/maxquant.py'
2026-02-11T23:09:20,020   adding 'sdrf_pipelines/converters/maxquant/modifications.xml'
2026-02-11T23:09:20,024   adding 'sdrf_pipelines/converters/maxquant/param2sdrf.yml'
2026-02-11T23:09:20,025   adding 'sdrf_pipelines/converters/msstats/__init__.py'
2026-02-11T23:09:20,027   adding 'sdrf_pipelines/converters/msstats/msstats.py'
2026-02-11T23:09:20,028   adding 'sdrf_pipelines/converters/normalyzerde/__init__.py'
2026-02-11T23:09:20,030   adding 'sdrf_pipelines/converters/normalyzerde/normalyzerde.py'
2026-02-11T23:09:20,032   adding 'sdrf_pipelines/converters/openms/__init__.py'
2026-02-11T23:09:20,033   adding 'sdrf_pipelines/converters/openms/constants.py'
2026-02-11T23:09:20,035   adding 'sdrf_pipelines/converters/openms/experimental_design.py'
2026-02-11T23:09:20,037   adding 'sdrf_pipelines/converters/openms/modifications.py'
2026-02-11T23:09:20,039   adding 'sdrf_pipelines/converters/openms/openms.py'
2026-02-11T23:09:20,041   adding 'sdrf_pipelines/converters/openms/unimod.py'
2026-02-11T23:09:20,146   adding 'sdrf_pipelines/converters/openms/unimod.xml'
2026-02-11T23:09:20,163   adding 'sdrf_pipelines/converters/openms/utils.py'
2026-02-11T23:09:20,164   adding 'sdrf_pipelines/ols/__init__.py'
2026-02-11T23:09:20,168   adding 'sdrf_pipelines/ols/ols.py'
2026-02-11T23:09:20,170   adding 'sdrf_pipelines/sdrf/__init__.py'
2026-02-11T23:09:20,172   adding 'sdrf_pipelines/sdrf/sdrf.py'
2026-02-11T23:09:20,173   adding 'sdrf_pipelines/sdrf/specification.py'
2026-02-11T23:09:20,177   adding 'sdrf_pipelines/sdrf/validators.py'
2026-02-11T23:09:20,179   adding 'sdrf_pipelines/sdrf/schemas/__init__.py'
2026-02-11T23:09:20,180   adding 'sdrf_pipelines/sdrf/schemas/models.py'
2026-02-11T23:09:20,183   adding 'sdrf_pipelines/sdrf/schemas/registry.py'
2026-02-11T23:09:20,184   adding 'sdrf_pipelines/sdrf/schemas/utils.py'
2026-02-11T23:09:20,186   adding 'sdrf_pipelines/sdrf/schemas/validator.py'
2026-02-11T23:09:20,188   adding 'sdrf_pipelines/sdrf/sdrf-templates/templates.yaml'
2026-02-11T23:09:20,190   adding 'sdrf_pipelines/sdrf/sdrf-templates/affinity-proteomics/1.1.0/affinity-proteomics.yaml'
2026-02-11T23:09:20,193   adding 'sdrf_pipelines/sdrf/sdrf-templates/base/1.1.0/base.yaml'
2026-02-11T23:09:20,195   adding 'sdrf_pipelines/sdrf/sdrf-templates/cell-lines/1.1.0/cell-lines.yaml'
2026-02-11T23:09:20,197   adding 'sdrf_pipelines/sdrf/sdrf-templates/crosslinking/1.1.0/crosslinking.yaml'
2026-02-11T23:09:20,199   adding 'sdrf_pipelines/sdrf/sdrf-templates/dda-acquisition/1.1.0/dda-acquisition.yaml'
2026-02-11T23:09:20,202   adding 'sdrf_pipelines/sdrf/sdrf-templates/dia-acquisition/1.1.0/dia-acquisition.yaml'
2026-02-11T23:09:20,204   adding 'sdrf_pipelines/sdrf/sdrf-templates/human/1.1.0/human.yaml'
2026-02-11T23:09:20,206   adding 'sdrf_pipelines/sdrf/sdrf-templates/immunopeptidomics/1.0.0-dev/immunopeptidomics.yaml'
2026-02-11T23:09:20,208   adding 'sdrf_pipelines/sdrf/sdrf-templates/invertebrates/1.1.0/invertebrates.yaml'
2026-02-11T23:09:20,211   adding 'sdrf_pipelines/sdrf/sdrf-templates/metaproteomics/1.0.0-dev/metaproteomics.yaml'
2026-02-11T23:09:20,213   adding 'sdrf_pipelines/sdrf/sdrf-templates/ms-proteomics/1.1.0/ms-proteomics.yaml'
2026-02-11T23:09:20,215   adding 'sdrf_pipelines/sdrf/sdrf-templates/olink/1.0.0/olink.yaml'
2026-02-11T23:09:20,217   adding 'sdrf_pipelines/sdrf/sdrf-templates/plants/1.1.0/plants.yaml'
2026-02-11T23:09:20,219   adding 'sdrf_pipelines/sdrf/sdrf-templates/scripts/generate_manifest.py'
2026-02-11T23:09:20,222   adding 'sdrf_pipelines/sdrf/sdrf-templates/single-cell/1.0.0/single-cell.yaml'
2026-02-11T23:09:20,224   adding 'sdrf_pipelines/sdrf/sdrf-templates/somascan/1.0.0/somascan.yaml'
2026-02-11T23:09:20,227   adding 'sdrf_pipelines/sdrf/sdrf-templates/vertebrates/1.1.0/vertebrates.yaml'
2026-02-11T23:09:20,228   adding 'sdrf_pipelines/utils/__init__.py'
2026-02-11T23:09:20,230   adding 'sdrf_pipelines/utils/error_codes.py'
2026-02-11T23:09:20,232   adding 'sdrf_pipelines/utils/exceptions.py'
2026-02-11T23:09:20,233   adding 'sdrf_pipelines/utils/manifest.py'
2026-02-11T23:09:20,235   adding 'sdrf_pipelines/utils/utils.py'
2026-02-11T23:09:20,238   adding 'sdrf_pipelines-0.1.0.dist-info/licenses/LICENSE'
2026-02-11T23:09:20,240   adding 'sdrf_pipelines-0.1.0.dist-info/METADATA'
2026-02-11T23:09:20,241   adding 'sdrf_pipelines-0.1.0.dist-info/WHEEL'
2026-02-11T23:09:20,242   adding 'sdrf_pipelines-0.1.0.dist-info/entry_points.txt'
2026-02-11T23:09:20,243   adding 'sdrf_pipelines-0.1.0.dist-info/top_level.txt'
2026-02-11T23:09:20,244   adding 'sdrf_pipelines-0.1.0.dist-info/RECORD'
2026-02-11T23:09:20,251   removing build/bdist.linux-armv7l/wheel
2026-02-11T23:09:20,386   Building wheel for sdrf-pipelines (pyproject.toml): finished with status 'done'
2026-02-11T23:09:20,397   Created wheel for sdrf-pipelines: filename=sdrf_pipelines-0.1.0-py3-none-any.whl size=502783 sha256=27d95be71e5f58918bbffa93b835beef4979db90710321d0b916b1dfe0827595
2026-02-11T23:09:20,399   Stored in directory: /tmp/pip-ephem-wheel-cache-32ck5uj4/wheels/45/22/2b/1bb4c72c72ed11d28755502fc6edbea227d51125ec23936d4b
2026-02-11T23:09:20,412 Successfully built sdrf-pipelines
2026-02-11T23:09:20,442 Removed build tracker: '/tmp/pip-build-tracker-gh7kskfz'