2026-02-13T01:47:45,296 Created temporary directory: /tmp/pip-ephem-wheel-cache-87o_4dub 2026-02-13T01:47:45,298 Created temporary directory: /tmp/pip-build-tracker-35s6d7jd 2026-02-13T01:47:45,299 Initialized build tracking at /tmp/pip-build-tracker-35s6d7jd 2026-02-13T01:47:45,299 Created build tracker: /tmp/pip-build-tracker-35s6d7jd 2026-02-13T01:47:45,300 Entered build tracker: /tmp/pip-build-tracker-35s6d7jd 2026-02-13T01:47:45,300 Created temporary directory: /tmp/pip-wheel-6g4zlmqs 2026-02-13T01:47:45,303 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-02-13T01:47:45,306 Created temporary directory: /tmp/pip-ephem-wheel-cache-t5dfsqui 2026-02-13T01:47:45,327 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-02-13T01:47:45,331 2 location(s) to search for versions of pyxmipp3: 2026-02-13T01:47:45,331 * https://pypi.org/simple/pyxmipp3/ 2026-02-13T01:47:45,331 * https://www.piwheels.org/simple/pyxmipp3/ 2026-02-13T01:47:45,332 Fetching project page and analyzing links: https://pypi.org/simple/pyxmipp3/ 2026-02-13T01:47:45,332 Getting page https://pypi.org/simple/pyxmipp3/ 2026-02-13T01:47:45,334 Found index url https://pypi.org/simple 2026-02-13T01:47:45,563 Fetched page https://pypi.org/simple/pyxmipp3/ as application/vnd.pypi.simple.v1+json 2026-02-13T01:47:45,569 Skipping link: No binaries permitted for pyxmipp3: https://files.pythonhosted.org/packages/e4/22/c0ebd69a72039b4aa92400f7ba58ce93e92efee91bf70757f946184837ac/pyxmipp3-0.1.0-cp310-cp310-manylinux_2_28_aarch64.whl (from https://pypi.org/simple/pyxmipp3/) (requires-python:>=3.7) 2026-02-13T01:47:45,570 Skipping link: No binaries permitted for pyxmipp3: https://files.pythonhosted.org/packages/ea/17/ffa8ff895af6a07db20595dd7308f2d10083e714f304c076a47dcc9e65bf/pyxmipp3-0.1.0-cp310-cp310-manylinux_2_28_x86_64.whl (from https://pypi.org/simple/pyxmipp3/) (requires-python:>=3.7) 2026-02-13T01:47:45,570 Skipping link: No binaries permitted for pyxmipp3: https://files.pythonhosted.org/packages/33/b4/40509b80c37200fd7e689c9784b0dacbdc9372af31d7ff9894a598f26de8/pyxmipp3-0.1.0-cp311-cp311-manylinux_2_28_aarch64.whl (from https://pypi.org/simple/pyxmipp3/) (requires-python:>=3.7) 2026-02-13T01:47:45,571 Skipping link: No binaries permitted for pyxmipp3: 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https://files.pythonhosted.org/packages/56/3a/e5ed2fa2b63358c1826eea022cd5af857cd59e1a1fa3cffd6b1e8acf9242/pyxmipp3-0.1.0-cp313-cp313-manylinux_2_28_aarch64.whl (from https://pypi.org/simple/pyxmipp3/) (requires-python:>=3.7) 2026-02-13T01:47:45,573 Skipping link: No binaries permitted for pyxmipp3: https://files.pythonhosted.org/packages/95/74/45ca532d7b4054d9dd74f7a88655cd41e9e010b867b0f18d5281d62a5fbf/pyxmipp3-0.1.0-cp313-cp313-manylinux_2_28_x86_64.whl (from https://pypi.org/simple/pyxmipp3/) (requires-python:>=3.7) 2026-02-13T01:47:45,574 Skipping link: No binaries permitted for pyxmipp3: https://files.pythonhosted.org/packages/24/ca/4a0270022c6fc4be9e773f82cc8f5b148c6d4c210a9a27a0438102adf155/pyxmipp3-0.1.0-cp314-cp314-manylinux_2_28_aarch64.whl (from https://pypi.org/simple/pyxmipp3/) (requires-python:>=3.7) 2026-02-13T01:47:45,574 Skipping link: No binaries permitted for pyxmipp3: https://files.pythonhosted.org/packages/5f/63/8c1d075da15a54e1675674fd34b73fa35310183b9f2a75610ce3140dae19/pyxmipp3-0.1.0-cp314-cp314-manylinux_2_28_x86_64.whl (from https://pypi.org/simple/pyxmipp3/) (requires-python:>=3.7) 2026-02-13T01:47:45,575 Skipping link: No binaries permitted for pyxmipp3: https://files.pythonhosted.org/packages/0b/5c/1ee744392ce9ad5e107e8985c1de5d373bc0d4e664c954da2eb9ec6a3159/pyxmipp3-0.1.0-cp38-cp38-manylinux_2_28_aarch64.whl (from https://pypi.org/simple/pyxmipp3/) (requires-python:>=3.7) 2026-02-13T01:47:45,575 Skipping link: No binaries permitted for pyxmipp3: https://files.pythonhosted.org/packages/21/ac/abd8d9a813f18e2faacc302128981f8c0b9a7d4b82ed2cd3cad947ef2029/pyxmipp3-0.1.0-cp38-cp38-manylinux_2_28_x86_64.whl (from https://pypi.org/simple/pyxmipp3/) (requires-python:>=3.7) 2026-02-13T01:47:45,576 Skipping link: No binaries permitted for pyxmipp3: https://files.pythonhosted.org/packages/8b/a8/0d2d5a55e5fb07e5e62e940f10c8c07dc22d4726268d9edc488a02a66d44/pyxmipp3-0.1.0-cp39-cp39-manylinux_2_28_aarch64.whl (from https://pypi.org/simple/pyxmipp3/) (requires-python:>=3.7) 2026-02-13T01:47:45,576 Skipping link: No binaries permitted for pyxmipp3: https://files.pythonhosted.org/packages/54/1a/6eed46233fd1fa8d72edfd465fd1bfb3a3cf24de34df04aa5132ae871921/pyxmipp3-0.1.0-cp39-cp39-manylinux_2_28_x86_64.whl (from https://pypi.org/simple/pyxmipp3/) (requires-python:>=3.7) 2026-02-13T01:47:45,577 Found link https://files.pythonhosted.org/packages/58/ed/ec787a7121ed8e4d6be0a5abda6a0f54866ad25589b73c1e8380d77023c0/pyxmipp3-0.1.0.tar.gz (from https://pypi.org/simple/pyxmipp3/) (requires-python:>=3.7), version: 0.1.0 2026-02-13T01:47:45,578 Skipping link: No binaries permitted for pyxmipp3: https://files.pythonhosted.org/packages/7e/54/dd334439310a01b9efa64d08e7a4f2c2c423960a600b603dbd63b0c7ff83/pyxmipp3-0.1.1-cp310-cp310-manylinux_2_28_aarch64.whl (from https://pypi.org/simple/pyxmipp3/) (requires-python:>=3.7) 2026-02-13T01:47:45,578 Skipping link: No binaries permitted for pyxmipp3: https://files.pythonhosted.org/packages/59/47/5d698de8367b3692fb68be1859b678ea38a49ce737d64694e9a8f343883e/pyxmipp3-0.1.1-cp310-cp310-manylinux_2_28_x86_64.whl (from https://pypi.org/simple/pyxmipp3/) (requires-python:>=3.7) 2026-02-13T01:47:45,579 Skipping link: No binaries permitted for pyxmipp3: https://files.pythonhosted.org/packages/4a/b8/a81b1286e0bddb43a3a071582e7585595a82f3c84621523257f3344b532d/pyxmipp3-0.1.1-cp311-cp311-manylinux_2_28_aarch64.whl (from https://pypi.org/simple/pyxmipp3/) (requires-python:>=3.7) 2026-02-13T01:47:45,579 Skipping link: No binaries permitted for pyxmipp3: https://files.pythonhosted.org/packages/b2/59/04206af387b5fcba44834ac753ce4764927da803808884cbc2a3460bd04f/pyxmipp3-0.1.1-cp311-cp311-manylinux_2_28_x86_64.whl (from https://pypi.org/simple/pyxmipp3/) (requires-python:>=3.7) 2026-02-13T01:47:45,580 Skipping link: No binaries permitted for pyxmipp3: https://files.pythonhosted.org/packages/30/ff/578fabea5a7c34c92f566140f45068045279a937d1dd1d426bca0b35607c/pyxmipp3-0.1.1-cp312-cp312-manylinux_2_28_aarch64.whl (from https://pypi.org/simple/pyxmipp3/) (requires-python:>=3.7) 2026-02-13T01:47:45,581 Skipping link: No binaries permitted for pyxmipp3: https://files.pythonhosted.org/packages/11/79/45f6ac6fe24426205d04c8b7590d5c943ace5d199a7c6fa9ef381fee09d3/pyxmipp3-0.1.1-cp312-cp312-manylinux_2_28_x86_64.whl (from https://pypi.org/simple/pyxmipp3/) (requires-python:>=3.7) 2026-02-13T01:47:45,581 Skipping link: No binaries permitted for pyxmipp3: https://files.pythonhosted.org/packages/88/d2/eb3ec72709537551253f98062668ae31a44f2e232e2a55c41e34e36713ab/pyxmipp3-0.1.1-cp313-cp313-manylinux_2_28_aarch64.whl (from https://pypi.org/simple/pyxmipp3/) (requires-python:>=3.7) 2026-02-13T01:47:45,582 Skipping link: No binaries permitted for pyxmipp3: https://files.pythonhosted.org/packages/5a/f4/62b5232cc10229f10ed025519b52d01bef5b80813c215b13660d4e352136/pyxmipp3-0.1.1-cp313-cp313-manylinux_2_28_x86_64.whl (from https://pypi.org/simple/pyxmipp3/) (requires-python:>=3.7) 2026-02-13T01:47:45,583 Skipping link: No binaries permitted for pyxmipp3: https://files.pythonhosted.org/packages/38/92/9e0eaa6340f3ee42708e8450d8a7c9054df97236af58a6026c7958fd9310/pyxmipp3-0.1.1-cp314-cp314-manylinux_2_28_aarch64.whl (from https://pypi.org/simple/pyxmipp3/) (requires-python:>=3.7) 2026-02-13T01:47:45,583 Skipping link: No binaries permitted for pyxmipp3: https://files.pythonhosted.org/packages/08/6f/d0e0c9e65b85a7e0664f6690db06aea1301dd300804d047d6e5f882ce0cf/pyxmipp3-0.1.1-cp314-cp314-manylinux_2_28_x86_64.whl (from https://pypi.org/simple/pyxmipp3/) (requires-python:>=3.7) 2026-02-13T01:47:45,584 Skipping link: No binaries permitted for pyxmipp3: https://files.pythonhosted.org/packages/ef/14/59ac2820a02d20701814d1427ba54387d87214af04634f06c8a617561d96/pyxmipp3-0.1.1-cp38-cp38-manylinux_2_28_aarch64.whl (from https://pypi.org/simple/pyxmipp3/) (requires-python:>=3.7) 2026-02-13T01:47:45,584 Skipping link: No binaries permitted for pyxmipp3: https://files.pythonhosted.org/packages/96/09/2c532df1f3928f353c652d8c31ed66080e14a869d78cfaffbb496bfb7fb5/pyxmipp3-0.1.1-cp38-cp38-manylinux_2_28_x86_64.whl (from https://pypi.org/simple/pyxmipp3/) (requires-python:>=3.7) 2026-02-13T01:47:45,585 Skipping link: No binaries permitted for pyxmipp3: https://files.pythonhosted.org/packages/df/c4/66ca8a5a197fca4b55e7377290e76166f8b0a624f8808c613c3e24ab48a9/pyxmipp3-0.1.1-cp39-cp39-manylinux_2_28_aarch64.whl (from https://pypi.org/simple/pyxmipp3/) (requires-python:>=3.7) 2026-02-13T01:47:45,585 Skipping link: No binaries permitted for pyxmipp3: https://files.pythonhosted.org/packages/eb/a3/1aa2be1dd5b3900fc15f736f8449895ea9bd01edad21d2779c26f556ae17/pyxmipp3-0.1.1-cp39-cp39-manylinux_2_28_x86_64.whl (from https://pypi.org/simple/pyxmipp3/) (requires-python:>=3.7) 2026-02-13T01:47:45,586 Found link https://files.pythonhosted.org/packages/b7/ea/ad6c54170be27a8af09e89484b307c79c4b6102503ca7998ed07ca4d8cc0/pyxmipp3-0.1.1.tar.gz (from https://pypi.org/simple/pyxmipp3/) (requires-python:>=3.7), version: 0.1.1 2026-02-13T01:47:45,587 Fetching project page and analyzing links: https://www.piwheels.org/simple/pyxmipp3/ 2026-02-13T01:47:45,588 Getting page https://www.piwheels.org/simple/pyxmipp3/ 2026-02-13T01:47:45,589 Found index url https://www.piwheels.org/simple 2026-02-13T01:47:45,757 Fetched page https://www.piwheels.org/simple/pyxmipp3/ as text/html 2026-02-13T01:47:45,758 Skipping link: not a file: https://www.piwheels.org/simple/pyxmipp3/ 2026-02-13T01:47:45,759 Skipping link: not a file: https://pypi.org/simple/pyxmipp3/ 2026-02-13T01:47:45,779 Given no hashes to check 1 links for project 'pyxmipp3': discarding no candidates 2026-02-13T01:47:45,799 Collecting pyxmipp3==0.1.1 2026-02-13T01:47:45,801 Created temporary directory: /tmp/pip-unpack-5uetdg1d 2026-02-13T01:47:46,036 Downloading pyxmipp3-0.1.1.tar.gz (2.1 MB) 2026-02-13T01:47:47,319 Added pyxmipp3==0.1.1 from https://files.pythonhosted.org/packages/b7/ea/ad6c54170be27a8af09e89484b307c79c4b6102503ca7998ed07ca4d8cc0/pyxmipp3-0.1.1.tar.gz to build tracker '/tmp/pip-build-tracker-35s6d7jd' 2026-02-13T01:47:47,328 Created temporary directory: /tmp/pip-build-env-kqyw_ggw 2026-02-13T01:47:47,334 Installing build dependencies: started 2026-02-13T01:47:47,336 Running command pip subprocess to install build dependencies 2026-02-13T01:47:48,516 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-02-13T01:47:49,074 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-02-13T01:47:49,097 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-02-13T01:47:49,597 Collecting scikit-build-core==0.11.* 2026-02-13T01:47:49,625 Using cached https://www.piwheels.org/simple/scikit-build-core/scikit_build_core-0.11.6-py3-none-any.whl (185 kB) 2026-02-13T01:47:50,632 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/3a/be/650f9c091ef71cb01d735775d554e068752d3ff63d7943b26316dc401749/numpy-1.21.2.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2026-02-13T01:47:50,640 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/5f/d6/ad58ded26556eaeaa8c971e08b6466f17c4ac4d786cd3d800e26ce59cc01/numpy-1.21.3.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2026-02-13T01:47:50,647 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/fb/48/b0708ebd7718a8933f0d3937513ef8ef2f4f04529f1f66ca86d873043921/numpy-1.21.4.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2026-02-13T01:47:50,654 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/c2/a8/a924a09492bdfee8c2ec3094d0a13f2799800b4fdc9c890738aeeb12c72e/numpy-1.21.5.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2026-02-13T01:47:50,661 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/45/b7/de7b8e67f2232c26af57c205aaad29fe17754f793404f59c8a730c7a191a/numpy-1.21.6.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2026-02-13T01:47:51,353 Collecting numpy==1.* 2026-02-13T01:47:51,804 Using cached https://www.piwheels.org/simple/numpy/numpy-1.26.4-cp311-cp311-linux_armv7l.whl (5.6 MB) 2026-02-13T01:47:52,304 Collecting packaging>=23.2 2026-02-13T01:47:52,321 Using cached https://www.piwheels.org/simple/packaging/packaging-26.0-py3-none-any.whl (74 kB) 2026-02-13T01:47:52,440 Collecting pathspec>=0.10.1 2026-02-13T01:47:52,460 Using cached https://www.piwheels.org/simple/pathspec/pathspec-1.0.4-py3-none-any.whl (55 kB) 2026-02-13T01:47:55,350 Installing collected packages: pathspec, packaging, numpy, scikit-build-core 2026-02-13T01:48:04,722 Creating /tmp/pip-build-env-kqyw_ggw/overlay/local/bin 2026-02-13T01:48:04,724 changing mode of /tmp/pip-build-env-kqyw_ggw/overlay/local/bin/f2py to 755 2026-02-13T01:48:05,368 Successfully installed numpy-1.26.4 packaging-26.0 pathspec-1.0.4 scikit-build-core-0.11.6 2026-02-13T01:48:05,689 Installing build dependencies: finished with status 'done' 2026-02-13T01:48:05,696 Getting requirements to build wheel: started 2026-02-13T01:48:05,697 Running command Getting requirements to build wheel 2026-02-13T01:48:06,204 WARNING: Use build.verbose instead of cmake.verbose for scikit-build-core >= 0.10 2026-02-13T01:48:06,366 Getting requirements to build wheel: finished with status 'done' 2026-02-13T01:48:06,369 Created temporary directory: /tmp/pip-modern-metadata-wp0a3nnw 2026-02-13T01:48:06,372 Preparing metadata (pyproject.toml): started 2026-02-13T01:48:06,373 Running command Preparing metadata (pyproject.toml) 2026-02-13T01:48:07,014 WARNING: Use build.verbose instead of cmake.verbose for scikit-build-core >= 0.10 2026-02-13T01:48:07,066 *** scikit-build-core 0.11.6 using CMake 3.25.1 (metadata_wheel) 2026-02-13T01:48:07,173 Preparing metadata (pyproject.toml): finished with status 'done' 2026-02-13T01:48:07,178 Source in /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c has version 0.1.1, which satisfies requirement pyxmipp3==0.1.1 from https://files.pythonhosted.org/packages/b7/ea/ad6c54170be27a8af09e89484b307c79c4b6102503ca7998ed07ca4d8cc0/pyxmipp3-0.1.1.tar.gz 2026-02-13T01:48:07,179 Removed pyxmipp3==0.1.1 from https://files.pythonhosted.org/packages/b7/ea/ad6c54170be27a8af09e89484b307c79c4b6102503ca7998ed07ca4d8cc0/pyxmipp3-0.1.1.tar.gz from build tracker '/tmp/pip-build-tracker-35s6d7jd' 2026-02-13T01:48:07,184 Created temporary directory: /tmp/pip-unpack-sesp1smh 2026-02-13T01:48:07,185 Building wheels for collected packages: pyxmipp3 2026-02-13T01:48:07,190 Created temporary directory: /tmp/pip-wheel-ma9q8t0w 2026-02-13T01:48:07,190 Destination directory: /tmp/pip-wheel-ma9q8t0w 2026-02-13T01:48:07,192 Building wheel for pyxmipp3 (pyproject.toml): started 2026-02-13T01:48:07,194 Running command Building wheel for pyxmipp3 (pyproject.toml) 2026-02-13T01:48:07,824 WARNING: Use build.verbose instead of cmake.verbose for scikit-build-core >= 0.10 2026-02-13T01:48:07,873 *** scikit-build-core 0.11.6 using CMake 3.25.1 (wheel) 2026-02-13T01:48:07,899 *** Configuring CMake... 2026-02-13T01:48:08,268 loading initial cache file /tmp/tmp84cuqb92/build/CMakeInit.txt 2026-02-13T01:48:08,558 -- The C compiler identification is GNU 12.2.0 2026-02-13T01:48:09,182 -- The CXX compiler identification is GNU 12.2.0 2026-02-13T01:48:09,236 -- Detecting C compiler ABI info 2026-02-13T01:48:09,524 -- Detecting C compiler ABI info - done 2026-02-13T01:48:09,561 -- Check for working C compiler: /usr/bin/arm-linux-gnueabihf-gcc - skipped 2026-02-13T01:48:09,562 -- Detecting C compile features 2026-02-13T01:48:09,565 -- Detecting C compile features - done 2026-02-13T01:48:09,585 -- Detecting CXX compiler ABI info 2026-02-13T01:48:09,914 -- Detecting CXX compiler ABI info - done 2026-02-13T01:48:09,953 -- Check for working CXX compiler: /usr/bin/arm-linux-gnueabihf-g++ - skipped 2026-02-13T01:48:09,954 -- Detecting CXX compile features 2026-02-13T01:48:09,957 -- Detecting CXX compile features - done 2026-02-13T01:48:09,996 -- Performing Test CMAKE_HAVE_LIBC_PTHREAD 2026-02-13T01:48:10,336 -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success 2026-02-13T01:48:10,342 -- Found Threads: TRUE 2026-02-13T01:48:11,508 -- Found Python: /usr/bin/python3 (found version "3.11.2") found components: Interpreter Development.Module NumPy 2026-02-13T01:48:19,450 -- Building tiff version 4.7.1 2026-02-13T01:48:19,462 -- Performing Test C_FLAG_Wall 2026-02-13T01:48:19,722 -- Performing Test C_FLAG_Wall - Success 2026-02-13T01:48:19,726 -- Performing Test C_FLAG_Winline 2026-02-13T01:48:20,013 -- Performing Test C_FLAG_Winline - Success 2026-02-13T01:48:20,017 -- Performing Test C_FLAG_Wformat_security 2026-02-13T01:48:20,274 -- Performing Test C_FLAG_Wformat_security - Success 2026-02-13T01:48:20,278 -- Performing Test C_FLAG_Wpointer_arith 2026-02-13T01:48:20,535 -- Performing Test C_FLAG_Wpointer_arith - Success 2026-02-13T01:48:20,539 -- Performing Test C_FLAG_Wdisabled_optimization 2026-02-13T01:48:20,830 -- Performing Test C_FLAG_Wdisabled_optimization - Success 2026-02-13T01:48:20,834 -- Performing Test C_FLAG_Wno_unknown_pragmas 2026-02-13T01:48:21,092 -- Performing Test C_FLAG_Wno_unknown_pragmas - Success 2026-02-13T01:48:21,096 -- Performing Test C_FLAG_fstrict_aliasing 2026-02-13T01:48:21,351 -- Performing Test C_FLAG_fstrict_aliasing - Success 2026-02-13T01:48:21,355 -- Performing Test HAVE_LD_VERSION_SCRIPT 2026-02-13T01:48:21,645 -- Performing Test HAVE_LD_VERSION_SCRIPT - Success 2026-02-13T01:48:21,655 -- Looking for assert.h 2026-02-13T01:48:21,927 -- Looking for assert.h - found 2026-02-13T01:48:21,928 -- Looking for fcntl.h 2026-02-13T01:48:22,208 -- Looking for fcntl.h - found 2026-02-13T01:48:22,209 -- Looking for io.h 2026-02-13T01:48:22,351 -- Looking for io.h - not found 2026-02-13T01:48:22,353 -- Looking for strings.h 2026-02-13T01:48:22,647 -- Looking for strings.h - found 2026-02-13T01:48:22,648 -- Looking for sys/time.h 2026-02-13T01:48:22,926 -- Looking for sys/time.h - found 2026-02-13T01:48:22,927 -- Looking for sys/types.h 2026-02-13T01:48:23,233 -- Looking for sys/types.h - found 2026-02-13T01:48:23,235 -- Looking for unistd.h 2026-02-13T01:48:23,523 -- Looking for unistd.h - found 2026-02-13T01:48:23,528 -- Looking for getopt 2026-02-13T01:48:23,826 -- Looking for getopt - found 2026-02-13T01:48:23,828 -- Looking for optarg 2026-02-13T01:48:24,163 -- Looking for optarg - found 2026-02-13T01:48:24,165 -- Looking for mmap 2026-02-13T01:48:24,443 -- Looking for mmap - found 2026-02-13T01:48:24,445 -- Looking for setmode 2026-02-13T01:48:24,609 -- Looking for setmode - not found 2026-02-13T01:48:24,623 -- Looking for stdint.h 2026-02-13T01:48:24,915 -- Looking for stdint.h - found 2026-02-13T01:48:24,917 -- Looking for stddef.h 2026-02-13T01:48:25,252 -- Looking for stddef.h - found 2026-02-13T01:48:25,253 -- Check size of size_t 2026-02-13T01:48:25,548 -- Check size of size_t - done 2026-02-13T01:48:25,613 -- Found ZLIB: /usr/lib/arm-linux-gnueabihf/libz.so (found version "1.2.13") 2026-02-13T01:48:25,638 -- Found Deflate: /usr/lib/arm-linux-gnueabihf/libdeflate.so (found version "1.14") 2026-02-13T01:48:25,930 -- Found JPEG: /usr/lib/arm-linux-gnueabihf/libjpeg.so (found version "62") 2026-02-13T01:48:25,936 -- Performing Test HAVE_JPEGTURBO_DUAL_MODE_8_12 2026-02-13T01:48:26,250 -- Performing Test HAVE_JPEGTURBO_DUAL_MODE_8_12 - Failed 2026-02-13T01:48:26,270 -- Found JBIG: /usr/lib/arm-linux-gnueabihf/libjbig.so (found version "2.1") 2026-02-13T01:48:26,271 -- Looking for jbg_newlen 2026-02-13T01:48:26,553 -- Looking for jbg_newlen - found 2026-02-13T01:48:26,572 -- Found LERC: /usr/lib/arm-linux-gnueabihf/libLerc.so (found version "4.0.0") 2026-02-13T01:48:26,589 -- Looking for lzma_auto_decoder in /usr/lib/arm-linux-gnueabihf/liblzma.so 2026-02-13T01:48:26,896 -- Looking for lzma_auto_decoder in /usr/lib/arm-linux-gnueabihf/liblzma.so - found 2026-02-13T01:48:26,897 -- Looking for lzma_easy_encoder in /usr/lib/arm-linux-gnueabihf/liblzma.so 2026-02-13T01:48:27,171 -- Looking for lzma_easy_encoder in /usr/lib/arm-linux-gnueabihf/liblzma.so - found 2026-02-13T01:48:27,172 -- Looking for lzma_lzma_preset in /usr/lib/arm-linux-gnueabihf/liblzma.so 2026-02-13T01:48:27,447 -- Looking for lzma_lzma_preset in /usr/lib/arm-linux-gnueabihf/liblzma.so - found 2026-02-13T01:48:27,452 -- Found liblzma: /usr/lib/arm-linux-gnueabihf/liblzma.so (found version "5.4.1") 2026-02-13T01:48:27,486 -- Found ZSTD: /usr/lib/arm-linux-gnueabihf/libzstd.so (found version "1.5.4") 2026-02-13T01:48:27,488 -- Looking for ZSTD_decompressStream 2026-02-13T01:48:27,801 -- Looking for ZSTD_decompressStream - found 2026-02-13T01:48:27,818 -- Found WebP: /usr/lib/arm-linux-gnueabihf/libwebp.so 2026-02-13T01:48:27,851 -- Found OpenGL: /usr/lib/arm-linux-gnueabihf/libOpenGL.so found components: OpenGL 2026-02-13T01:48:28,259 -- Could NOT find GLUT (missing: GLUT_glut_LIBRARY GLUT_INCLUDE_DIR) 2026-02-13T01:48:28,260 -- Looking for GL/gl.h 2026-02-13T01:48:28,737 -- Looking for GL/gl.h - found 2026-02-13T01:48:28,739 -- Looking for GL/glu.h 2026-02-13T01:48:29,143 -- Looking for GL/glu.h - found 2026-02-13T01:48:29,145 -- Looking for GL/glut.h 2026-02-13T01:48:29,291 -- Looking for GL/glut.h - not found 2026-02-13T01:48:29,293 -- Looking for GLUT/glut.h 2026-02-13T01:48:29,439 -- Looking for GLUT/glut.h - not found 2026-02-13T01:48:29,440 -- Looking for OpenGL/gl.h 2026-02-13T01:48:29,588 -- Looking for OpenGL/gl.h - not found 2026-02-13T01:48:29,589 -- Looking for OpenGL/glu.h 2026-02-13T01:48:29,735 -- Looking for OpenGL/glu.h - not found 2026-02-13T01:48:29,743 -- Looking for pow 2026-02-13T01:48:30,058 -- Looking for pow - not found 2026-02-13T01:48:30,062 -- Looking for pow 2026-02-13T01:48:30,395 -- Looking for pow - found 2026-02-13T01:48:30,400 -- Found CMath: TRUE 2026-02-13T01:48:30,480 -- 2026-02-13T01:48:30,480 -- Libtiff is now configured for Linux-6.1.21-v7l+ 2026-02-13T01:48:30,481 -- 2026-02-13T01:48:30,482 -- Libtiff build version: 4.7.1 2026-02-13T01:48:30,482 -- Libtiff library version: 6.2.0 2026-02-13T01:48:30,483 -- Libtiff release date: 20250911 2026-02-13T01:48:30,484 -- 2026-02-13T01:48:30,484 -- Installation directory: /tmp/tmp84cuqb92/wheel/platlib 2026-02-13T01:48:30,485 -- Documentation directory: share/doc/pyxmipp3 2026-02-13T01:48:30,485 -- C compiler: /usr/bin/arm-linux-gnueabihf-gcc 2026-02-13T01:48:30,485 -- C++ compiler: /usr/bin/arm-linux-gnueabihf-g++ 2026-02-13T01:48:30,486 -- Build shared libraries: OFF 2026-02-13T01:48:30,486 -- Build tools: OFF 2026-02-13T01:48:30,487 -- Build tests: ON 2026-02-13T01:48:30,487 -- Build contrib: ON 2026-02-13T01:48:30,488 -- Build docs: OFF 2026-02-13T01:48:30,488 -- Build deprecated features: OFF 2026-02-13T01:48:30,488 -- Enable linker symbol versioning: TRUE 2026-02-13T01:48:30,489 -- Support Microsoft Document Imaging: ON 2026-02-13T01:48:30,489 -- Use win32 IO: OFF 2026-02-13T01:48:30,490 -- 2026-02-13T01:48:30,490 -- Support for internal codecs: 2026-02-13T01:48:30,491 -- CCITT Group 3 & 4 algorithms: ON 2026-02-13T01:48:30,491 -- Macintosh PackBits algorithm: ON 2026-02-13T01:48:30,491 -- LZW algorithm: ON 2026-02-13T01:48:30,492 -- ThunderScan 4-bit RLE algorithm: ON 2026-02-13T01:48:30,492 -- NeXT 2-bit RLE algorithm: ON 2026-02-13T01:48:30,493 -- LogLuv high dynamic range encoding: ON 2026-02-13T01:48:30,493 -- 2026-02-13T01:48:30,494 -- Support for external codecs: 2026-02-13T01:48:30,494 -- ZLIB support: Requested:ON Availability:TRUE Support:TRUE 2026-02-13T01:48:30,495 -- libdeflate support: Requested:ON Availability:TRUE Support:TRUE 2026-02-13T01:48:30,495 -- Pixar log-format algorithm: Requested:ON Availability:TRUE Support:TRUE 2026-02-13T01:48:30,495 -- JPEG support: Requested:ON Availability:TRUE Support:TRUE 2026-02-13T01:48:30,496 -- Old JPEG support: Requested:ON Availability:TRUE Support:TRUE 2026-02-13T01:48:30,496 -- JPEG 8/12 bit dual mode: Requested:OFF Availability:FALSE Support:FALSE 2026-02-13T01:48:30,497 -- ISO JBIG support: Requested:ON Availability:TRUE Support:TRUE 2026-02-13T01:48:30,497 -- LERC support: Requested:ON Availability:TRUE Support:TRUE 2026-02-13T01:48:30,498 -- LZMA2 support: Requested:ON Availability:TRUE Support:TRUE 2026-02-13T01:48:30,498 -- ZSTD support: Requested:ON Availability:TRUE Support:TRUE 2026-02-13T01:48:30,499 -- WEBP support: Requested:ON Availability:TRUE Support:TRUE 2026-02-13T01:48:30,499 -- 2026-02-13T01:48:30,500 -- C++ support: ON (requested) TRUE (availability) 2026-02-13T01:48:30,500 -- 2026-02-13T01:48:30,501 -- OpenGL support: Requested:OFF Availability:FALSE Support:FALSE 2026-02-13T01:48:30,501 -- 2026-02-13T01:48:30,593 -- Configuring done 2026-02-13T01:48:31,192 -- Generating done 2026-02-13T01:48:31,384 -- Build files have been written to: /tmp/tmp84cuqb92/build 2026-02-13T01:48:31,536 *** Building project with Ninja... 2026-02-13T01:48:31,788 [1/297] Creating directories for 'libjpeg_external' 2026-02-13T01:48:31,795 [2/297] Creating directories for 'fftw3_double_external' 2026-02-13T01:48:31,809 [3/297] Creating directories for 'hdf5_external' 2026-02-13T01:48:31,828 [4/297] Creating directories for 'fftw3_float_external' 2026-02-13T01:48:32,416 [5/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_aux.c.o 2026-02-13T01:48:32,871 [6/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_close.c.o 2026-02-13T01:48:33,436 [7/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_codec.c.o 2026-02-13T01:48:34,316 [8/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_color.c.o 2026-02-13T01:48:34,396 [9/297] Performing download step (download, verify and extract) for 'libjpeg_external' 2026-02-13T01:48:34,596 [10/297] No update step for 'libjpeg_external' 2026-02-13T01:48:34,857 [11/297] No patch step for 'libjpeg_external' 2026-02-13T01:48:35,313 [12/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_compress.c.o 2026-02-13T01:48:38,437 [13/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_dir.c.o 2026-02-13T01:48:39,497 [14/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_dirinfo.c.o 2026-02-13T01:48:40,363 [15/297] Performing download step (download, verify and extract) for 'fftw3_double_external' 2026-02-13T01:48:40,493 [16/297] Performing download step (download, verify and extract) for 'fftw3_float_external' 2026-02-13T01:48:40,621 [17/297] No update step for 'fftw3_double_external' 2026-02-13T01:48:40,791 [18/297] No update step for 'fftw3_float_external' 2026-02-13T01:48:40,843 [19/297] No patch step for 'fftw3_double_external' 2026-02-13T01:48:40,994 [20/297] No patch step for 'fftw3_float_external' 2026-02-13T01:48:46,274 [21/297] Performing download step (download, verify and extract) for 'hdf5_external' 2026-02-13T01:48:46,456 [22/297] No update step for 'hdf5_external' 2026-02-13T01:48:46,624 [23/297] No patch step for 'hdf5_external' 2026-02-13T01:48:48,271 [24/297] Performing configure step for 'libjpeg_external' 2026-02-13T01:48:56,459 [25/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_dirread.c.o 2026-02-13T01:49:12,191 [26/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_dirwrite.c.o 2026-02-13T01:49:13,068 [27/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_dumpmode.c.o 2026-02-13T01:49:13,996 [28/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_error.c.o 2026-02-13T01:49:14,777 [29/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_extension.c.o 2026-02-13T01:49:36,465 [30/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_fax3.c.o 2026-02-13T01:49:37,817 [31/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_fax3sm.c.o 2026-02-13T01:49:38,596 [32/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_flush.c.o 2026-02-13T01:49:45,189 [33/297] Performing configure step for 'fftw3_float_external' 2026-02-13T01:49:45,219 [34/297] Performing configure step for 'fftw3_double_external' 2026-02-13T01:49:58,050 [35/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_getimage.c.o 2026-02-13T01:49:59,903 [36/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_hash_set.c.o 2026-02-13T01:50:01,321 [37/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_jbig.c.o 2026-02-13T01:50:05,685 [38/297] Performing build step for 'libjpeg_external' 2026-02-13T01:50:06,797 [39/297] Performing install step for 'libjpeg_external' 2026-02-13T01:50:06,798 -- Install configuration: "Release" 2026-02-13T01:50:06,799 -- Installing: /tmp/tmp84cuqb92/build/external/libjpeg-turbo/lib/libjpeg.a 2026-02-13T01:50:06,800 -- Installing: /tmp/tmp84cuqb92/build/external/libjpeg-turbo/bin/cjpeg 2026-02-13T01:50:06,801 -- Installing: /tmp/tmp84cuqb92/build/external/libjpeg-turbo/bin/djpeg 2026-02-13T01:50:06,803 -- Installing: /tmp/tmp84cuqb92/build/external/libjpeg-turbo/bin/jpegtran 2026-02-13T01:50:06,823 -- Installing: /tmp/tmp84cuqb92/build/external/libjpeg-turbo/bin/rdjpgcom 2026-02-13T01:50:06,824 -- Installing: /tmp/tmp84cuqb92/build/external/libjpeg-turbo/bin/wrjpgcom 2026-02-13T01:50:06,825 -- Installing: /tmp/tmp84cuqb92/build/external/libjpeg-turbo/share/doc/libjpeg-turbo/README.ijg 2026-02-13T01:50:06,826 -- Installing: /tmp/tmp84cuqb92/build/external/libjpeg-turbo/share/doc/libjpeg-turbo/README.md 2026-02-13T01:50:06,827 -- Installing: /tmp/tmp84cuqb92/build/external/libjpeg-turbo/share/doc/libjpeg-turbo/example.c 2026-02-13T01:50:06,828 -- Installing: /tmp/tmp84cuqb92/build/external/libjpeg-turbo/share/doc/libjpeg-turbo/tjcomp.c 2026-02-13T01:50:06,828 -- Installing: /tmp/tmp84cuqb92/build/external/libjpeg-turbo/share/doc/libjpeg-turbo/tjdecomp.c 2026-02-13T01:50:06,829 -- Installing: /tmp/tmp84cuqb92/build/external/libjpeg-turbo/share/doc/libjpeg-turbo/tjtran.c 2026-02-13T01:50:06,830 -- Installing: /tmp/tmp84cuqb92/build/external/libjpeg-turbo/share/doc/libjpeg-turbo/libjpeg.txt 2026-02-13T01:50:06,831 -- Installing: /tmp/tmp84cuqb92/build/external/libjpeg-turbo/share/doc/libjpeg-turbo/structure.txt 2026-02-13T01:50:06,833 -- Installing: /tmp/tmp84cuqb92/build/external/libjpeg-turbo/share/doc/libjpeg-turbo/usage.txt 2026-02-13T01:50:06,833 -- Installing: /tmp/tmp84cuqb92/build/external/libjpeg-turbo/share/doc/libjpeg-turbo/wizard.txt 2026-02-13T01:50:06,834 -- Installing: /tmp/tmp84cuqb92/build/external/libjpeg-turbo/share/doc/libjpeg-turbo/LICENSE.md 2026-02-13T01:50:06,835 -- Installing: /tmp/tmp84cuqb92/build/external/libjpeg-turbo/share/man/man1/cjpeg.1 2026-02-13T01:50:06,835 -- Installing: /tmp/tmp84cuqb92/build/external/libjpeg-turbo/share/man/man1/djpeg.1 2026-02-13T01:50:06,836 -- Installing: /tmp/tmp84cuqb92/build/external/libjpeg-turbo/share/man/man1/jpegtran.1 2026-02-13T01:50:06,837 -- Installing: /tmp/tmp84cuqb92/build/external/libjpeg-turbo/share/man/man1/rdjpgcom.1 2026-02-13T01:50:06,837 -- Installing: /tmp/tmp84cuqb92/build/external/libjpeg-turbo/share/man/man1/wrjpgcom.1 2026-02-13T01:50:06,838 -- Installing: /tmp/tmp84cuqb92/build/external/libjpeg-turbo/lib/pkgconfig/libjpeg.pc 2026-02-13T01:50:06,839 -- Installing: /tmp/tmp84cuqb92/build/external/libjpeg-turbo/lib/cmake/libjpeg-turbo/libjpeg-turboConfig.cmake 2026-02-13T01:50:06,840 -- Installing: /tmp/tmp84cuqb92/build/external/libjpeg-turbo/lib/cmake/libjpeg-turbo/libjpeg-turboConfigVersion.cmake 2026-02-13T01:50:06,850 -- Installing: /tmp/tmp84cuqb92/build/external/libjpeg-turbo/lib/cmake/libjpeg-turbo/libjpeg-turboTargets.cmake 2026-02-13T01:50:06,863 -- Installing: /tmp/tmp84cuqb92/build/external/libjpeg-turbo/lib/cmake/libjpeg-turbo/libjpeg-turboTargets-release.cmake 2026-02-13T01:50:06,864 -- Installing: /tmp/tmp84cuqb92/build/external/libjpeg-turbo/include/jconfig.h 2026-02-13T01:50:06,865 -- Installing: /tmp/tmp84cuqb92/build/external/libjpeg-turbo/include/jerror.h 2026-02-13T01:50:06,866 -- Installing: /tmp/tmp84cuqb92/build/external/libjpeg-turbo/include/jmorecfg.h 2026-02-13T01:50:06,867 -- Installing: /tmp/tmp84cuqb92/build/external/libjpeg-turbo/include/jpeglib.h 2026-02-13T01:50:07,507 [40/297] Completed 'libjpeg_external' 2026-02-13T01:50:08,196 [41/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_jpeg_12.c.o 2026-02-13T01:50:12,725 [42/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_jpeg.c.o 2026-02-13T01:50:15,672 [43/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_lerc.c.o 2026-02-13T01:50:18,030 [44/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_lzma.c.o 2026-02-13T01:50:22,677 [45/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_luv.c.o 2026-02-13T01:50:23,446 [46/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_lzw.c.o 2026-02-13T01:50:24,109 [47/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_next.c.o 2026-02-13T01:50:27,808 [48/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_open.c.o 2026-02-13T01:50:29,878 [49/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_packbits.c.o 2026-02-13T01:50:37,203 [50/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_ojpeg.c.o 2026-02-13T01:50:42,284 [51/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_pixarlog.c.o 2026-02-13T01:50:45,180 [52/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_predict.c.o 2026-02-13T01:50:47,137 [53/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_print.c.o 2026-02-13T01:50:49,150 [54/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_strip.c.o 2026-02-13T01:50:50,946 [55/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_swab.c.o 2026-02-13T01:50:51,227 [56/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_read.c.o 2026-02-13T01:50:52,766 [57/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_thunder.c.o 2026-02-13T01:50:53,462 [58/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_tile.c.o 2026-02-13T01:50:53,505 [59/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_version.c.o 2026-02-13T01:50:54,789 [60/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_warning.c.o 2026-02-13T01:50:56,966 [61/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_webp.c.o 2026-02-13T01:50:58,416 [62/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_write.c.o 2026-02-13T01:51:00,004 [63/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_zip.c.o 2026-02-13T01:51:00,327 [64/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_zstd.c.o 2026-02-13T01:51:01,986 [65/297] Building C object _deps/libtiff-build/libtiff/CMakeFiles/tiff.dir/tif_unix.c.o 2026-02-13T01:51:04,075 [66/297] Linking C static library _deps/libtiff-build/libtiff/libtiff.a 2026-02-13T01:51:06,826 [67/297] Building C object _deps/libtiff-build/test/CMakeFiles/test_signed_tags.dir/test_signed_tags.c.o 2026-02-13T01:51:08,471 [68/297] Linking CXX executable _deps/libtiff-build/test/test_signed_tags 2026-02-13T01:51:09,736 [69/297] Building C object _deps/libtiff-build/test/CMakeFiles/ascii_tag.dir/ascii_tag.c.o 2026-02-13T01:51:10,669 [70/297] Building CXX object _deps/libtiff-build/libtiff/CMakeFiles/tiffxx.dir/tif_stream.cxx.o 2026-02-13T01:51:11,494 [71/297] Linking CXX executable _deps/libtiff-build/test/ascii_tag 2026-02-13T01:51:11,670 [72/297] Linking CXX static library _deps/libtiff-build/libtiff/libtiffxx.a 2026-02-13T01:51:12,543 [73/297] Building C object _deps/libtiff-build/test/CMakeFiles/long_tag.dir/check_tag.c.o 2026-02-13T01:51:12,645 [74/297] Building C object _deps/libtiff-build/test/CMakeFiles/long_tag.dir/long_tag.c.o 2026-02-13T01:51:13,825 [75/297] Building C object _deps/libtiff-build/test/CMakeFiles/short_tag.dir/short_tag.c.o 2026-02-13T01:51:14,320 [76/297] Linking CXX executable _deps/libtiff-build/test/long_tag 2026-02-13T01:51:14,751 [77/297] Building C object _deps/libtiff-build/test/CMakeFiles/short_tag.dir/check_tag.c.o 2026-02-13T01:51:15,040 [78/297] Building C object _deps/libtiff-build/test/CMakeFiles/strip_rw.dir/strip_rw.c.o 2026-02-13T01:51:16,399 [79/297] Linking CXX executable _deps/libtiff-build/test/short_tag 2026-02-13T01:51:16,620 [80/297] Building C object _deps/libtiff-build/test/CMakeFiles/strip_rw.dir/strip.c.o 2026-02-13T01:51:17,176 [81/297] Building C object _deps/libtiff-build/test/CMakeFiles/strip_rw.dir/test_arrays.c.o 2026-02-13T01:51:18,910 [82/297] Linking CXX executable _deps/libtiff-build/test/strip_rw 2026-02-13T01:51:19,234 [83/297] Building C object _deps/libtiff-build/test/CMakeFiles/rewrite.dir/rewrite_tag.c.o 2026-02-13T01:51:20,470 [84/297] Building C object _deps/libtiff-build/test/CMakeFiles/raw_decode.dir/raw_decode.c.o 2026-02-13T01:51:20,956 [85/297] Linking CXX executable _deps/libtiff-build/test/rewrite 2026-02-13T01:51:21,942 [86/297] Linking CXX executable _deps/libtiff-build/test/raw_decode 2026-02-13T01:51:22,326 [87/297] Building C object _deps/libtiff-build/test/CMakeFiles/custom_dir.dir/custom_dir.c.o 2026-02-13T01:51:23,809 [88/297] Linking CXX executable _deps/libtiff-build/test/custom_dir 2026-02-13T01:51:26,744 [89/297] Building C object _deps/libtiff-build/test/CMakeFiles/rational_precision2double.dir/rational_precision2double.c.o 2026-02-13T01:51:28,332 [90/297] Linking CXX executable _deps/libtiff-build/test/rational_precision2double 2026-02-13T01:51:30,390 [91/297] Building C object _deps/libtiff-build/test/CMakeFiles/test_transferfunction_write_read.dir/test_transferfunction_write_read.c.o 2026-02-13T01:51:31,939 [92/297] Linking CXX executable _deps/libtiff-build/test/test_transferfunction_write_read 2026-02-13T01:51:32,881 [93/297] Building C object _deps/libtiff-build/test/CMakeFiles/test_write_read_tags.dir/test_write_read_tags.c.o 2026-02-13T01:51:34,605 [94/297] Linking CXX executable _deps/libtiff-build/test/test_write_read_tags 2026-02-13T01:51:36,576 [95/297] Building C object _deps/libtiff-build/test/CMakeFiles/defer_strile_loading.dir/defer_strile_loading.c.o 2026-02-13T01:51:38,219 [96/297] Linking CXX executable _deps/libtiff-build/test/defer_strile_loading 2026-02-13T01:51:39,567 [97/297] Building C object _deps/libtiff-build/test/CMakeFiles/custom_dir_EXIF_231.dir/custom_dir_EXIF_231.c.o 2026-02-13T01:51:40,651 [98/297] Building C object _deps/libtiff-build/test/CMakeFiles/defer_strile_writing.dir/defer_strile_writing.c.o 2026-02-13T01:51:41,099 [99/297] Linking CXX executable _deps/libtiff-build/test/custom_dir_EXIF_231 2026-02-13T01:51:42,340 [100/297] Linking CXX executable _deps/libtiff-build/test/defer_strile_writing 2026-02-13T01:51:51,907 [101/297] Performing configure step for 'hdf5_external' 2026-02-13T01:51:51,925 [102/297] Building C object _deps/libtiff-build/test/CMakeFiles/test_directory.dir/test_directory.c.o 2026-02-13T01:51:53,992 [103/297] Linking CXX executable _deps/libtiff-build/test/test_directory 2026-02-13T01:51:54,540 [104/297] Building C object _deps/libtiff-build/test/CMakeFiles/testtypes.dir/testtypes.c.o 2026-02-13T01:51:55,207 [105/297] Building C object _deps/libtiff-build/test/CMakeFiles/test_IFD_enlargement.dir/test_IFD_enlargement.c.o 2026-02-13T01:51:55,908 [106/297] Linking CXX executable _deps/libtiff-build/test/testtypes 2026-02-13T01:51:57,415 [107/297] Linking CXX executable _deps/libtiff-build/test/test_IFD_enlargement 2026-02-13T01:51:58,896 [108/297] Building C object _deps/libtiff-build/test/CMakeFiles/test_append_to_strip.dir/test_append_to_strip.c.o 2026-02-13T01:51:59,374 [109/297] Building C object _deps/libtiff-build/test/CMakeFiles/test_open_options.dir/test_open_options.c.o 2026-02-13T01:52:01,040 [110/297] Linking CXX executable _deps/libtiff-build/test/test_append_to_strip 2026-02-13T01:52:01,247 [111/297] Linking CXX executable _deps/libtiff-build/test/test_open_options 2026-02-13T01:52:03,028 [112/297] Building C object _deps/libtiff-build/test/CMakeFiles/test_ifd_loop_detection.dir/test_ifd_loop_detection.c.o 2026-02-13T01:52:05,100 [113/297] Linking CXX executable _deps/libtiff-build/test/test_ifd_loop_detection 2026-02-13T01:52:06,476 [114/297] Building C object _deps/libtiff-build/contrib/addtiffo/CMakeFiles/addtiffo.dir/addtiffo.c.o 2026-02-13T01:52:09,568 [115/297] Building C object _deps/libtiff-build/test/CMakeFiles/test_RGBAImage.dir/test_RGBAImage.c.o 2026-02-13T01:52:11,780 [116/297] Linking CXX executable _deps/libtiff-build/test/test_RGBAImage 2026-02-13T01:52:13,756 [117/297] Building C object _deps/libtiff-build/contrib/addtiffo/CMakeFiles/addtiffo.dir/tif_overview.c.o 2026-02-13T01:52:14,238 [118/297] Building C object _deps/libtiff-build/contrib/addtiffo/CMakeFiles/addtiffo.dir/tif_ovrcache.c.o 2026-02-13T01:52:15,021 [119/297] Building C object _deps/libtiff-build/contrib/dbs/CMakeFiles/tiff-bi.dir/tiff-bi.c.o 2026-02-13T01:52:16,297 [120/297] Linking CXX executable _deps/libtiff-build/contrib/addtiffo/addtiffo 2026-02-13T01:52:17,052 [121/297] Linking CXX executable _deps/libtiff-build/contrib/dbs/tiff-bi 2026-02-13T01:52:17,807 [122/297] Building C object _deps/libtiff-build/contrib/dbs/CMakeFiles/tiff-grayscale.dir/tiff-grayscale.c.o 2026-02-13T01:52:19,435 [123/297] Building C object _deps/libtiff-build/contrib/dbs/CMakeFiles/tiff-palette.dir/tiff-palette.c.o 2026-02-13T01:52:19,980 [124/297] Linking CXX executable _deps/libtiff-build/contrib/dbs/tiff-grayscale 2026-02-13T01:52:21,559 [125/297] Linking CXX executable _deps/libtiff-build/contrib/dbs/tiff-palette 2026-02-13T01:52:22,817 [126/297] Building C object _deps/libtiff-build/contrib/dbs/CMakeFiles/tiff-rgb.dir/tiff-rgb.c.o 2026-02-13T01:52:25,009 [127/297] Linking CXX executable _deps/libtiff-build/contrib/dbs/tiff-rgb 2026-02-13T01:52:25,497 [128/297] Building C object _deps/libtiff-build/contrib/iptcutil/CMakeFiles/iptcutil.dir/iptcutil.c.o 2026-02-13T01:52:26,696 [129/297] Linking CXX executable _deps/libtiff-build/contrib/iptcutil/iptcutil 2026-02-13T01:53:09,975 [130/297] Performing build step for 'fftw3_float_external' 2026-02-13T01:53:10,726 [131/297] Performing install step for 'fftw3_float_external' 2026-02-13T01:53:10,727 -- Install configuration: "Release" 2026-02-13T01:53:10,728 -- Installing: /tmp/tmp84cuqb92/build/external/fftw3/lib/libfftw3f.a 2026-02-13T01:53:10,729 -- Installing: /tmp/tmp84cuqb92/build/external/fftw3/lib/libfftw3f_threads.a 2026-02-13T01:53:10,730 -- Installing: /tmp/tmp84cuqb92/build/external/fftw3/lib/libfftw3f.a 2026-02-13T01:53:10,731 -- Installing: /tmp/tmp84cuqb92/build/external/fftw3/include/fftw3.h 2026-02-13T01:53:10,732 -- Installing: /tmp/tmp84cuqb92/build/external/fftw3/include/fftw3.f 2026-02-13T01:53:10,732 -- Installing: /tmp/tmp84cuqb92/build/external/fftw3/include/fftw3l.f03 2026-02-13T01:53:10,733 -- Installing: /tmp/tmp84cuqb92/build/external/fftw3/include/fftw3q.f03 2026-02-13T01:53:10,734 -- Installing: /tmp/tmp84cuqb92/build/external/fftw3/include/fftw3.f03 2026-02-13T01:53:10,735 -- Installing: /tmp/tmp84cuqb92/build/external/fftw3/lib/pkgconfig/fftw3f.pc 2026-02-13T01:53:10,736 -- Installing: /tmp/tmp84cuqb92/build/external/fftw3/lib/cmake/fftw3f/FFTW3fConfig.cmake 2026-02-13T01:53:10,737 -- Installing: /tmp/tmp84cuqb92/build/external/fftw3/lib/cmake/fftw3f/FFTW3fConfigVersion.cmake 2026-02-13T01:53:10,738 -- Installing: /tmp/tmp84cuqb92/build/external/fftw3/lib/cmake/fftw3f/FFTW3LibraryDepends.cmake 2026-02-13T01:53:10,739 -- Installing: /tmp/tmp84cuqb92/build/external/fftw3/lib/cmake/fftw3f/FFTW3LibraryDepends-release.cmake 2026-02-13T01:53:11,183 [132/297] Completed 'fftw3_float_external' 2026-02-13T01:53:26,096 [133/297] Performing build step for 'fftw3_double_external' 2026-02-13T01:53:26,489 [134/297] Performing install step for 'fftw3_double_external' 2026-02-13T01:53:26,490 -- Install configuration: "Release" 2026-02-13T01:53:26,491 -- Installing: /tmp/tmp84cuqb92/build/external/fftw3/lib/libfftw3.a 2026-02-13T01:53:26,492 -- Installing: /tmp/tmp84cuqb92/build/external/fftw3/lib/libfftw3_threads.a 2026-02-13T01:53:26,493 -- Up-to-date: /tmp/tmp84cuqb92/build/external/fftw3/lib/libfftw3.a 2026-02-13T01:53:26,494 -- Up-to-date: /tmp/tmp84cuqb92/build/external/fftw3/include/fftw3.h 2026-02-13T01:53:26,495 -- Up-to-date: /tmp/tmp84cuqb92/build/external/fftw3/include/fftw3.f 2026-02-13T01:53:26,496 -- Up-to-date: /tmp/tmp84cuqb92/build/external/fftw3/include/fftw3l.f03 2026-02-13T01:53:26,496 -- Up-to-date: /tmp/tmp84cuqb92/build/external/fftw3/include/fftw3q.f03 2026-02-13T01:53:26,497 -- Up-to-date: /tmp/tmp84cuqb92/build/external/fftw3/include/fftw3.f03 2026-02-13T01:53:26,498 -- Installing: /tmp/tmp84cuqb92/build/external/fftw3/lib/pkgconfig/fftw3.pc 2026-02-13T01:53:26,499 -- Installing: /tmp/tmp84cuqb92/build/external/fftw3/lib/cmake/fftw3/FFTW3Config.cmake 2026-02-13T01:53:26,500 -- Installing: /tmp/tmp84cuqb92/build/external/fftw3/lib/cmake/fftw3/FFTW3ConfigVersion.cmake 2026-02-13T01:53:26,501 -- Installing: /tmp/tmp84cuqb92/build/external/fftw3/lib/cmake/fftw3/FFTW3LibraryDepends.cmake 2026-02-13T01:53:26,502 -- Installing: /tmp/tmp84cuqb92/build/external/fftw3/lib/cmake/fftw3/FFTW3LibraryDepends-release.cmake 2026-02-13T01:53:26,822 [135/297] Completed 'fftw3_double_external' 2026-02-13T01:55:57,134 [136/297] Performing build step for 'hdf5_external' 2026-02-13T01:56:02,861 [137/297] Performing install step for 'hdf5_external' 2026-02-13T01:56:02,862 -- Install configuration: "" 2026-02-13T01:56:02,863 -- Installing: /tmp/tmp84cuqb92/build/external/hdf5/include/hdf5.h 2026-02-13T01:56:02,863 -- Installing: /tmp/tmp84cuqb92/build/external/hdf5/include/H5api_adpt.h 2026-02-13T01:56:02,864 -- Installing: /tmp/tmp84cuqb92/build/external/hdf5/include/H5encode.h 2026-02-13T01:56:02,864 -- Installing: /tmp/tmp84cuqb92/build/external/hdf5/include/H5public.h 2026-02-13T01:56:02,865 -- Installing: /tmp/tmp84cuqb92/build/external/hdf5/include/H5Apublic.h 2026-02-13T01:56:02,866 -- Installing: /tmp/tmp84cuqb92/build/external/hdf5/include/H5ACpublic.h 2026-02-13T01:56:02,866 -- Installing: 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src/CMakeFiles/xmippLib.dir/core/bilib/kerneldiff2.cc.o 2026-02-13T01:57:26,111 [177/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/minmax.cc.o 2026-02-13T01:57:26,130 [178/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/kernelintegrate.cc.o 2026-02-13T01:57:26,689 [179/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/interpolate.cc.o 2026-02-13T01:57:27,527 [180/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/movingaverage.cc.o 2026-02-13T01:57:28,054 [181/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/positivepower.cc.o 2026-02-13T01:57:28,407 [182/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/pyramidfilters.cc.o 2026-02-13T01:57:28,562 [183/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/alglib/linalg.cpp.o 2026-02-13T01:57:28,909 [184/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/polynomial.cc.o 2026-02-13T01:57:29,026 [185/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/swap.cc.o 2026-02-13T01:57:29,437 [186/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/timestamp.cc.o 2026-02-13T01:57:30,127 [187/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/wavelet.cc.o 2026-02-13T01:57:30,168 [188/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/round.cc.o 2026-02-13T01:57:30,318 [189/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/traceline.cc.o 2026-02-13T01:57:30,446 [190/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/morphology.cc.o 2026-02-13T01:57:32,037 [191/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/window.cc.o 2026-02-13T01:57:32,595 [192/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/waveletfiltersfract.cc.o 2026-02-13T01:57:32,819 [193/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/waveletfilters.cc.o 2026-02-13T01:57:33,505 [194/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/pyramidtools.cc.o 2026-02-13T01:57:33,547 [195/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/wavelettools.cc.o 2026-02-13T01:57:33,989 [196/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/bilib/linearalgebra.cc.o 2026-02-13T01:57:35,548 [197/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/comment_list.cpp.o 2026-02-13T01:57:44,898 [198/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/linear_system_helper.cpp.o 2026-02-13T01:58:01,337 [199/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/histogram.cpp.o 2026-02-13T01:58:02,728 [200/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/metadata_base.cpp.o 2026-02-13T01:58:08,084 [201/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/geometry.cpp.o 2026-02-13T01:58:08,085 In file included from /usr/include/c++/12/vector:70, 2026-02-13T01:58:08,086 from /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/matrix1d.h:31, 2026-02-13T01:58:08,087 from /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.h:34, 2026-02-13T01:58:08,088 from /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/geometry.h:29, 2026-02-13T01:58:08,089 from /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/geometry.cpp:29: 2026-02-13T01:58:08,090 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: 2026-02-13T01:58:08,091 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 2026-02-13T01:58:08,092 439 | vector<_Tp, _Alloc>:: 2026-02-13T01:58:08,093 | ^~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:08,094 In file included from /usr/include/c++/12/vector:64: 2026-02-13T01:58:08,095 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, 2026-02-13T01:58:08,096 inlined from ‘void computeCircleAroundE(const Matrix2D&, double, double, std::vector >&)’ at /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/geometry.cpp:1111:36: 2026-02-13T01:58:08,097 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2026-02-13T01:58:08,098 1287 | _M_realloc_insert(end(), __x); 2026-02-13T01:58:08,099 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2026-02-13T01:58:08,100 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, 2026-02-13T01:58:08,101 inlined from ‘void computeCircleAroundE(const Matrix2D&, double, double, std::vector >&)’ at /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/geometry.cpp:1112:36: 2026-02-13T01:58:08,102 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2026-02-13T01:58:08,103 1287 | _M_realloc_insert(end(), __x); 2026-02-13T01:58:08,104 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2026-02-13T01:58:08,105 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, 2026-02-13T01:58:08,106 inlined from ‘void computeCircleAroundE(const Matrix2D&, double, double, std::vector >&)’ at /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/geometry.cpp:1113:36: 2026-02-13T01:58:08,107 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2026-02-13T01:58:08,108 1287 | _M_realloc_insert(end(), __x); 2026-02-13T01:58:08,109 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2026-02-13T01:58:12,845 [202/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/metadata_generator.cpp.o 2026-02-13T01:58:18,157 [203/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/matrix1d.cpp.o 2026-02-13T01:58:21,639 [204/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/metadata_object.cpp.o 2026-02-13T01:58:21,640 In file included from /usr/include/c++/12/vector:70, 2026-02-13T01:58:21,641 from /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/xmipp_strings.h:29, 2026-02-13T01:58:21,642 from /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/metadata_label.h:31, 2026-02-13T01:58:21,643 from /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/metadata_object.h:31, 2026-02-13T01:58:21,644 from /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/metadata_object.cpp:30: 2026-02-13T01:58:21,645 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double&}; _Tp = double; _Alloc = std::allocator]’: 2026-02-13T01:58:21,646 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2026-02-13T01:58:21,647 439 | vector<_Tp, _Alloc>:: 2026-02-13T01:58:21,648 | ^~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:21,649 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double&}; _Tp = double; _Alloc = std::allocator]’, 2026-02-13T01:58:21,650 inlined from ‘bool MDObject::fromStream(std::istream&, bool)’ at /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/metadata_object.cpp:505:47: 2026-02-13T01:58:21,651 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-02-13T01:58:21,652 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-02-13T01:58:21,653 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:22,929 [205/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/metadata_query.cpp.o 2026-02-13T01:58:24,586 [206/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/metadata_db.cpp.o 2026-02-13T01:58:24,587 In file included from /usr/include/c++/12/vector:70, 2026-02-13T01:58:24,588 from /usr/include/c++/12/bits/random.h:34, 2026-02-13T01:58:24,589 from /usr/include/c++/12/random:49, 2026-02-13T01:58:24,590 from /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/metadata_db.cpp:28: 2026-02-13T01:58:24,591 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = MDObject; _Alloc = std::allocator]’: 2026-02-13T01:58:24,592 /usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2026-02-13T01:58:24,594 523 | vector<_Tp, _Alloc>:: 2026-02-13T01:58:24,595 | ^~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:24,596 In file included from /usr/include/c++/12/vector:64: 2026-02-13T01:58:24,597 In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = MDObject; _Alloc = std::allocator]’, 2026-02-13T01:58:24,598 inlined from ‘virtual void MetaDataDb::getColumnValues(MDLabel, std::vector&) const’ at /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/metadata_db.cpp:126:21: 2026-02-13T01:58:24,599 /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-02-13T01:58:24,600 1032 | _M_fill_insert(end(), __new_size - size(), __x); 2026-02-13T01:58:24,601 | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:24,602 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const MDLabel&}; _Tp = MDObject; _Alloc = std::allocator]’: 2026-02-13T01:58:24,603 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2026-02-13T01:58:24,603 439 | vector<_Tp, _Alloc>:: 2026-02-13T01:58:24,604 | ^~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:24,605 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {const MDLabel&}; _Tp = MDObject; _Alloc = std::allocator]’, 2026-02-13T01:58:24,606 inlined from ‘std::vector MetaDataDb::getObjectsForActiveLabels() const’ at /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/metadata_db.cpp:207:28: 2026-02-13T01:58:24,607 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-02-13T01:58:24,608 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-02-13T01:58:24,609 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:27,082 [207/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/metadata_row_sql.cpp.o 2026-02-13T01:58:29,955 [208/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/matrix2d.cpp.o 2026-02-13T01:58:29,956 In file included from /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/numerical_recipes.h:32, 2026-02-13T01:58:29,957 from /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/matrix2d.cpp:29: 2026-02-13T01:58:29,958 In function ‘void free_Tmatrix(T**&, int, int, int, int) [with T = double]’, 2026-02-13T01:58:29,959 inlined from ‘void free_Tmatrix(T**&, int, int, int, int) [with T = double]’ at /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/xmipp_memory.h:61:25, 2026-02-13T01:58:29,960 inlined from ‘void Matrix2D::killAdaptationForNumericalRecipes(T**) const [with T = double]’ at /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/matrix2d.h:890:21: 2026-02-13T01:58:29,961 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/xmipp_memory.h:67:17: warning: ‘void free(void*)’ called on pointer ‘*(double**)((char*))’ with nonzero offset 8 [-Wfree-nonheap-object] 2026-02-13T01:58:29,962 67 | free((char*)(m[i] + nrl)); 2026-02-13T01:58:29,963 | ~~~~^~~~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:29,964 In function ‘void free_Tmatrix(T**&, int, int, int, int) [with T = int]’, 2026-02-13T01:58:29,965 inlined from ‘void free_Tmatrix(T**&, int, int, int, int) [with T = int]’ at /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/xmipp_memory.h:61:25, 2026-02-13T01:58:29,966 inlined from ‘void Matrix2D::killAdaptationForNumericalRecipes(T**) const [with T = int]’ at /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/matrix2d.h:890:21: 2026-02-13T01:58:29,967 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/xmipp_memory.h:67:17: warning: ‘void free(void*)’ called on pointer ‘*(int**)((char*))’ with nonzero offset 4 [-Wfree-nonheap-object] 2026-02-13T01:58:29,969 67 | free((char*)(m[i] + nrl)); 2026-02-13T01:58:29,969 | ~~~~^~~~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:29,970 In function ‘void free_Tmatrix(T**&, int, int, int, int) [with T = float]’, 2026-02-13T01:58:29,971 inlined from ‘void free_Tmatrix(T**&, int, int, int, int) [with T = float]’ at /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/xmipp_memory.h:61:25, 2026-02-13T01:58:29,972 inlined from ‘void Matrix2D::killAdaptationForNumericalRecipes(T**) const [with T = float]’ at /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/matrix2d.h:890:21: 2026-02-13T01:58:29,973 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/xmipp_memory.h:67:17: warning: ‘void free(void*)’ called on pointer ‘*(float**)((char*))’ with nonzero offset 4 [-Wfree-nonheap-object] 2026-02-13T01:58:29,974 67 | free((char*)(m[i] + nrl)); 2026-02-13T01:58:29,975 | ~~~~^~~~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:29,976 In function ‘void free_Tmatrix(T**&, int, int, int, int) [with T = unsigned char]’, 2026-02-13T01:58:29,977 inlined from ‘void free_Tmatrix(T**&, int, int, int, int) [with T = unsigned char]’ at /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/xmipp_memory.h:61:25, 2026-02-13T01:58:29,978 inlined from ‘void Matrix2D::killAdaptationForNumericalRecipes(T**) const [with T = unsigned char]’ at /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/matrix2d.h:890:21: 2026-02-13T01:58:29,979 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/xmipp_memory.h:67:17: warning: ‘void free(void*)’ called on pointer ‘*(unsigned char**)((char*))’ with nonzero offset 1 [-Wfree-nonheap-object] 2026-02-13T01:58:29,980 67 | free((char*)(m[i] + nrl)); 2026-02-13T01:58:29,981 | ~~~~^~~~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:29,982 In file included from /usr/include/c++/12/vector:70, 2026-02-13T01:58:29,983 from /usr/include/c++/12/queue:61, 2026-02-13T01:58:29,984 from /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/matrix2d.cpp:26: 2026-02-13T01:58:29,985 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {std::complex}; _Tp = std::complex; _Alloc = std::allocator >]’: 2026-02-13T01:58:29,986 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 2026-02-13T01:58:29,987 439 | vector<_Tp, _Alloc>:: 2026-02-13T01:58:29,988 | ^~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:29,989 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::complex}; _Tp = std::complex; _Alloc = std::allocator >]’, 2026-02-13T01:58:29,994 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = std::complex; _Alloc = std::allocator >]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2026-02-13T01:58:29,995 inlined from ‘void allEigs(const Matrix2D&, std::vector >&)’ at /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/matrix2d.cpp:357:17: 2026-02-13T01:58:30,000 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2026-02-13T01:58:30,002 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-02-13T01:58:30,003 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:31,475 [209/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/metadata_row_vec.cpp.o 2026-02-13T01:58:31,476 In file included from /usr/include/c++/12/vector:70, 2026-02-13T01:58:31,477 from /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/xmipp_strings.h:29, 2026-02-13T01:58:31,478 from /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/metadata_label.h:31, 2026-02-13T01:58:31,478 from /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/metadata_row_base.h:31, 2026-02-13T01:58:31,479 from /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/metadata_row_vec.h:30, 2026-02-13T01:58:31,480 from /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/metadata_row_vec.cpp:29: 2026-02-13T01:58:31,481 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {MDObject}; _Tp = MDObject; _Alloc = std::allocator]’: 2026-02-13T01:58:31,483 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2026-02-13T01:58:31,484 439 | vector<_Tp, _Alloc>:: 2026-02-13T01:58:31,486 | ^~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:31,487 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {MDObject}; _Tp = MDObject; _Alloc = std::allocator]’, 2026-02-13T01:58:31,488 inlined from ‘size_t MDRowVec::newCol(MDLabel)’ at /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/metadata_row_vec.cpp:167:31: 2026-02-13T01:58:31,489 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-02-13T01:58:31,490 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-02-13T01:58:31,491 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:31,492 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {MDObject}; _Tp = MDObject; _Alloc = std::allocator]’, 2026-02-13T01:58:31,493 inlined from ‘size_t MDRowVec::newCol(MDLabel)’ at /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/metadata_row_vec.cpp:179:23: 2026-02-13T01:58:31,495 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-02-13T01:58:31,496 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-02-13T01:58:31,497 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:31,499 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {MDObject}; _Tp = MDObject; _Alloc = std::allocator]’, 2026-02-13T01:58:31,500 inlined from ‘virtual void MDRowVec::setValue(const MDObject&)’ at /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/metadata_row_vec.cpp:208:31: 2026-02-13T01:58:31,501 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-02-13T01:58:31,503 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-02-13T01:58:31,505 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:38,327 [210/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/multidim_array.cpp.o 2026-02-13T01:58:38,327 FAILED: src/CMakeFiles/xmippLib.dir/core/multidim_array.cpp.o 2026-02-13T01:58:38,328 /usr/bin/arm-linux-gnueabihf-g++ -DxmippLib_EXPORTS -I/tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src -I/api -I/tmp/tmp84cuqb92/build/_deps/sqlite3-src -I/tmp/tmp84cuqb92/build/_deps/libtiff-src/libtiff -I/tmp/tmp84cuqb92/build/_deps/libtiff-build/libtiff -isystem /usr/include/python3.11 -isystem /tmp/pip-build-env-kqyw_ggw/overlay/local/lib/python3.11/dist-packages/numpy/core/include -isystem /tmp/tmp84cuqb92/build/external/hdf5/include -isystem /tmp/tmp84cuqb92/build/external/fftw3/include -isystem /tmp/tmp84cuqb92/build/external/libjpeg-turbo/include -O3 -DNDEBUG -fPIC -std=gnu++17 -MD -MT src/CMakeFiles/xmippLib.dir/core/multidim_array.cpp.o -MF src/CMakeFiles/xmippLib.dir/core/multidim_array.cpp.o.d -o src/CMakeFiles/xmippLib.dir/core/multidim_array.cpp.o -c /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.cpp 2026-02-13T01:58:38,329 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.cpp:1138:16: error: template-id ‘mmapFile<>’ for ‘FILE* MultidimArray::mmapFile(bool*&, long unsigned int) const’ does not match any template declaration 2026-02-13T01:58:38,330 1138 | template FILE* MultidimArray::mmapFile(bool*&, unsigned long) const; 2026-02-13T01:58:38,331 | ^~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:38,331 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.cpp:859:7: note: candidate is: ‘FILE* MultidimArray::mmapFile(T*&, size_t) const [with T = bool; FILE = FILE; size_t = unsigned int]’ 2026-02-13T01:58:38,332 859 | FILE* MultidimArray::mmapFile(T* &_data, size_t nzyxDim) const 2026-02-13T01:58:38,333 | ^~~~~~~~~~~~~~~~ 2026-02-13T01:58:38,334 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.cpp:1139:16: error: template-id ‘mmapFile<>’ for ‘FILE* MultidimArray::mmapFile(float*&, long unsigned int) const’ does not match any template declaration 2026-02-13T01:58:38,336 1139 | template FILE* MultidimArray::mmapFile(float*&, unsigned long) const; 2026-02-13T01:58:38,337 | ^~~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:38,338 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.cpp:859:7: note: candidate is: ‘FILE* MultidimArray::mmapFile(T*&, size_t) const [with T = float; FILE = FILE; size_t = unsigned int]’ 2026-02-13T01:58:38,339 859 | FILE* MultidimArray::mmapFile(T* &_data, size_t nzyxDim) const 2026-02-13T01:58:38,340 | ^~~~~~~~~~~~~~~~ 2026-02-13T01:58:38,341 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.cpp:1140:16: error: template-id ‘mmapFile<>’ for ‘FILE* MultidimArray::mmapFile(char*&, long unsigned int) const’ does not match any template declaration 2026-02-13T01:58:38,342 1140 | template FILE* MultidimArray::mmapFile(char*&, unsigned long) const; 2026-02-13T01:58:38,344 | ^~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:38,345 In file included from /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.cpp:30: 2026-02-13T01:58:38,346 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.h:344:11: note: candidate is: ‘FILE* MultidimArray::mmapFile(T*&, size_t) const [with T = char; FILE = FILE; size_t = unsigned int]’ 2026-02-13T01:58:38,347 344 | FILE* mmapFile(T* &_data, size_t nzyxDim) const; 2026-02-13T01:58:38,348 | ^~~~~~~~ 2026-02-13T01:58:38,349 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.cpp:1141:16: error: template-id ‘mmapFile<>’ for ‘FILE* MultidimArray::mmapFile(int*&, long unsigned int) const’ does not match any template declaration 2026-02-13T01:58:38,350 1141 | template FILE* MultidimArray::mmapFile(int*&, unsigned long) const; 2026-02-13T01:58:38,351 | ^~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:38,352 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.h:344:11: note: candidate is: ‘FILE* MultidimArray::mmapFile(T*&, size_t) const [with T = int; FILE = FILE; size_t = unsigned int]’ 2026-02-13T01:58:38,353 344 | FILE* mmapFile(T* &_data, size_t nzyxDim) const; 2026-02-13T01:58:38,354 | ^~~~~~~~ 2026-02-13T01:58:38,355 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.cpp:1142:16: error: template-id ‘mmapFile<>’ for ‘FILE* MultidimArray::mmapFile(long int*&, long unsigned int) const’ does not match any template declaration 2026-02-13T01:58:38,356 1142 | template FILE* MultidimArray::mmapFile(long*&, unsigned long) const; 2026-02-13T01:58:38,357 | ^~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:38,358 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.cpp:859:7: note: candidate is: ‘FILE* MultidimArray::mmapFile(T*&, size_t) const [with T = long int; FILE = FILE; size_t = unsigned int]’ 2026-02-13T01:58:38,359 859 | FILE* MultidimArray::mmapFile(T* &_data, size_t nzyxDim) const 2026-02-13T01:58:38,360 | ^~~~~~~~~~~~~~~~ 2026-02-13T01:58:38,360 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.cpp:1143:16: error: template-id ‘mmapFile<>’ for ‘FILE* MultidimArray::mmapFile(short int*&, long unsigned int) const’ does not match any template declaration 2026-02-13T01:58:38,361 1143 | template FILE* MultidimArray::mmapFile(short*&, unsigned long) const; 2026-02-13T01:58:38,362 | ^~~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:38,363 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.cpp:859:7: note: candidate is: ‘FILE* MultidimArray::mmapFile(T*&, size_t) const [with T = short int; FILE = FILE; size_t = unsigned int]’ 2026-02-13T01:58:38,365 859 | FILE* MultidimArray::mmapFile(T* &_data, size_t nzyxDim) const 2026-02-13T01:58:38,366 | ^~~~~~~~~~~~~~~~ 2026-02-13T01:58:38,367 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.cpp:1144:16: error: template-id ‘mmapFile<>’ for ‘FILE* MultidimArray::mmapFile(unsigned char*&, long unsigned int) const’ does not match any template declaration 2026-02-13T01:58:38,368 1144 | template FILE* MultidimArray::mmapFile(unsigned char*&, unsigned long) const; 2026-02-13T01:58:38,369 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:38,370 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.cpp:859:7: note: candidate is: ‘FILE* MultidimArray::mmapFile(T*&, size_t) const [with T = unsigned char; FILE = FILE; size_t = unsigned int]’ 2026-02-13T01:58:38,371 859 | FILE* MultidimArray::mmapFile(T* &_data, size_t nzyxDim) const 2026-02-13T01:58:38,372 | ^~~~~~~~~~~~~~~~ 2026-02-13T01:58:38,373 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.cpp:1145:16: error: template-id ‘mmapFile<>’ for ‘FILE* MultidimArray::mmapFile(unsigned int*&, long unsigned int) const’ does not match any template declaration 2026-02-13T01:58:38,374 1145 | template FILE* MultidimArray::mmapFile(unsigned int*&, unsigned long) const; 2026-02-13T01:58:38,375 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:38,376 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.cpp:859:7: note: candidate is: ‘FILE* MultidimArray::mmapFile(T*&, size_t) const [with T = unsigned int; FILE = FILE; size_t = unsigned int]’ 2026-02-13T01:58:38,377 859 | FILE* MultidimArray::mmapFile(T* &_data, size_t nzyxDim) const 2026-02-13T01:58:38,378 | ^~~~~~~~~~~~~~~~ 2026-02-13T01:58:38,379 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.cpp:1146:16: error: template-id ‘mmapFile<>’ for ‘FILE* MultidimArray::mmapFile(long unsigned int*&, long unsigned int) const’ does not match any template declaration 2026-02-13T01:58:38,380 1146 | template FILE* MultidimArray::mmapFile(unsigned long*&, unsigned long) const; 2026-02-13T01:58:38,381 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:38,382 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.cpp:859:7: note: candidate is: ‘FILE* MultidimArray::mmapFile(T*&, size_t) const [with T = long unsigned int; FILE = FILE; size_t = unsigned int]’ 2026-02-13T01:58:38,383 859 | FILE* MultidimArray::mmapFile(T* &_data, size_t nzyxDim) const 2026-02-13T01:58:38,384 | ^~~~~~~~~~~~~~~~ 2026-02-13T01:58:38,385 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.cpp:1147:16: error: template-id ‘mmapFile<>’ for ‘FILE* MultidimArray::mmapFile(short unsigned int*&, long unsigned int) const’ does not match any template declaration 2026-02-13T01:58:38,386 1147 | template FILE* MultidimArray::mmapFile(unsigned short*&, unsigned long) const; 2026-02-13T01:58:38,387 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:38,388 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.cpp:859:7: note: candidate is: ‘FILE* MultidimArray::mmapFile(T*&, size_t) const [with T = short unsigned int; FILE = FILE; size_t = unsigned int]’ 2026-02-13T01:58:38,389 859 | FILE* MultidimArray::mmapFile(T* &_data, size_t nzyxDim) const 2026-02-13T01:58:38,393 | ^~~~~~~~~~~~~~~~ 2026-02-13T01:58:38,394 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.cpp:1148:16: error: template-id ‘mmapFile<>’ for ‘FILE* MultidimArray >::mmapFile(std::complex*&, long unsigned int) const’ does not match any template declaration 2026-02-13T01:58:38,395 1148 | template FILE* MultidimArray>::mmapFile(std::complex*&, unsigned long) const; 2026-02-13T01:58:38,397 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:38,398 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.h:344:11: note: candidate is: ‘FILE* MultidimArray::mmapFile(T*&, size_t) const [with T = std::complex; FILE = FILE; size_t = unsigned int]’ 2026-02-13T01:58:38,399 344 | FILE* mmapFile(T* &_data, size_t nzyxDim) const; 2026-02-13T01:58:38,400 | ^~~~~~~~ 2026-02-13T01:58:38,401 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.cpp:1149:16: error: template-id ‘mmapFile<>’ for ‘FILE* MultidimArray::mmapFile(half_float::half*&, long unsigned int) const’ does not match any template declaration 2026-02-13T01:58:38,402 1149 | template FILE* MultidimArray::mmapFile(half_float::half*&, unsigned long) const; 2026-02-13T01:58:38,403 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:38,404 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.cpp:859:7: note: candidate is: ‘FILE* MultidimArray::mmapFile(T*&, size_t) const [with T = half_float::half; FILE = FILE; size_t = unsigned int]’ 2026-02-13T01:58:38,405 859 | FILE* MultidimArray::mmapFile(T* &_data, size_t nzyxDim) const 2026-02-13T01:58:38,406 | ^~~~~~~~~~~~~~~~ 2026-02-13T01:58:38,407 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.cpp:1152:15: error: template-id ‘resize<>’ for ‘void MultidimArray::resize(long unsigned int, long unsigned int, long unsigned int, long unsigned int, bool)’ does not match any template declaration 2026-02-13T01:58:38,408 1152 | template void MultidimArray::resize(unsigned long, unsigned long, unsigned long, unsigned long, bool); 2026-02-13T01:58:38,409 | ^~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:38,410 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.h:490:10: note: candidates are: ‘template void MultidimArray::resize(const MultidimArray&, bool) [with T = bool]’ 2026-02-13T01:58:38,411 490 | void resize(const MultidimArray &v, bool copy = true) 2026-02-13T01:58:38,412 | ^~~~~~ 2026-02-13T01:58:38,413 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.cpp:983:6: note: ‘void MultidimArray::resize(size_t, size_t, size_t, size_t, bool) [with T = bool; size_t = unsigned int]’ 2026-02-13T01:58:38,414 983 | void MultidimArray::resize(size_t Ndim, size_t Zdim, size_t Ydim, size_t Xdim, bool copy) 2026-02-13T01:58:38,415 | ^~~~~~~~~~~~~~~~ 2026-02-13T01:58:38,416 In file included from /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.h:36: 2026-02-13T01:58:38,417 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:761:10: note: ‘void MultidimArrayBase::resize(size_t, size_t, size_t)’ 2026-02-13T01:58:38,418 761 | void resize(size_t Zdim, size_t Ydim, size_t Xdim) 2026-02-13T01:58:38,419 | ^~~~~~ 2026-02-13T01:58:38,420 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:773:10: note: ‘void MultidimArrayBase::resize(size_t, size_t)’ 2026-02-13T01:58:38,421 773 | void resize(size_t Ydim, size_t Xdim) 2026-02-13T01:58:38,422 | ^~~~~~ 2026-02-13T01:58:38,424 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:785:10: note: ‘void MultidimArrayBase::resize(size_t)’ 2026-02-13T01:58:38,425 785 | void resize(size_t Xdim) 2026-02-13T01:58:38,426 | ^~~~~~ 2026-02-13T01:58:38,427 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:793:10: note: ‘void MultidimArrayBase::resize(ArrayDim&, bool)’ 2026-02-13T01:58:38,428 793 | void resize(ArrayDim &adim, bool copy=true); 2026-02-13T01:58:38,429 | ^~~~~~ 2026-02-13T01:58:38,430 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.cpp:1153:15: error: template-id ‘resize<>’ for ‘void MultidimArray::resize(long unsigned int, long unsigned int, long unsigned int, long unsigned int, bool)’ does not match any template declaration 2026-02-13T01:58:38,432 1153 | template void MultidimArray::resize(unsigned long, unsigned long, unsigned long, unsigned long, bool); 2026-02-13T01:58:38,433 | ^~~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:38,434 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.h:490:10: note: candidates are: ‘template void MultidimArray::resize(const MultidimArray&, bool) [with T = float]’ 2026-02-13T01:58:38,435 490 | void resize(const MultidimArray &v, bool copy = true) 2026-02-13T01:58:38,436 | ^~~~~~ 2026-02-13T01:58:38,437 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.cpp:983:6: note: ‘void MultidimArray::resize(size_t, size_t, size_t, size_t, bool) [with T = float; size_t = unsigned int]’ 2026-02-13T01:58:38,438 983 | void MultidimArray::resize(size_t Ndim, size_t Zdim, size_t Ydim, size_t Xdim, bool copy) 2026-02-13T01:58:38,440 | ^~~~~~~~~~~~~~~~ 2026-02-13T01:58:38,441 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:761:10: note: ‘void MultidimArrayBase::resize(size_t, size_t, size_t)’ 2026-02-13T01:58:38,443 761 | void resize(size_t Zdim, size_t Ydim, size_t Xdim) 2026-02-13T01:58:38,444 | ^~~~~~ 2026-02-13T01:58:38,445 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:773:10: note: ‘void MultidimArrayBase::resize(size_t, size_t)’ 2026-02-13T01:58:38,446 773 | void resize(size_t Ydim, size_t Xdim) 2026-02-13T01:58:38,446 | ^~~~~~ 2026-02-13T01:58:38,447 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:785:10: note: ‘void MultidimArrayBase::resize(size_t)’ 2026-02-13T01:58:38,448 785 | void resize(size_t Xdim) 2026-02-13T01:58:38,449 | ^~~~~~ 2026-02-13T01:58:38,453 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:793:10: note: ‘void MultidimArrayBase::resize(ArrayDim&, bool)’ 2026-02-13T01:58:38,454 793 | void resize(ArrayDim &adim, bool copy=true); 2026-02-13T01:58:38,455 | ^~~~~~ 2026-02-13T01:58:38,455 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.cpp:1154:15: error: template-id ‘resize<>’ for ‘void MultidimArray::resize(long unsigned int, long unsigned int, long unsigned int, long unsigned int, bool)’ does not match any template declaration 2026-02-13T01:58:38,456 1154 | template void MultidimArray::resize(unsigned long, unsigned long, unsigned long, unsigned long, bool); 2026-02-13T01:58:38,457 | ^~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:38,458 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.h:490:10: note: candidates are: ‘template void MultidimArray::resize(const MultidimArray&, bool) [with T = char]’ 2026-02-13T01:58:38,459 490 | void resize(const MultidimArray &v, bool copy = true) 2026-02-13T01:58:38,460 | ^~~~~~ 2026-02-13T01:58:38,461 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.h:475:10: note: ‘void MultidimArray::resize(size_t, size_t, size_t, size_t, bool) [with T = char; size_t = unsigned int]’ 2026-02-13T01:58:38,462 475 | void resize(size_t Ndim, size_t Zdim, size_t Ydim, size_t Xdim, bool copy=true); 2026-02-13T01:58:38,464 | ^~~~~~ 2026-02-13T01:58:38,465 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:761:10: note: ‘void MultidimArrayBase::resize(size_t, size_t, size_t)’ 2026-02-13T01:58:38,466 761 | void resize(size_t Zdim, size_t Ydim, size_t Xdim) 2026-02-13T01:58:38,467 | ^~~~~~ 2026-02-13T01:58:38,468 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:773:10: note: ‘void MultidimArrayBase::resize(size_t, size_t)’ 2026-02-13T01:58:38,469 773 | void resize(size_t Ydim, size_t Xdim) 2026-02-13T01:58:38,470 | ^~~~~~ 2026-02-13T01:58:38,471 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:785:10: note: ‘void MultidimArrayBase::resize(size_t)’ 2026-02-13T01:58:38,472 785 | void resize(size_t Xdim) 2026-02-13T01:58:38,474 | ^~~~~~ 2026-02-13T01:58:38,475 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:793:10: note: ‘void MultidimArrayBase::resize(ArrayDim&, bool)’ 2026-02-13T01:58:38,476 793 | void resize(ArrayDim &adim, bool copy=true); 2026-02-13T01:58:38,477 | ^~~~~~ 2026-02-13T01:58:38,478 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.cpp:1155:15: error: template-id ‘resize<>’ for ‘void MultidimArray::resize(long unsigned int, long unsigned int, long unsigned int, long unsigned int, bool)’ does not match any template declaration 2026-02-13T01:58:38,479 1155 | template void MultidimArray::resize(unsigned long, unsigned long, unsigned long, unsigned long, bool); 2026-02-13T01:58:38,480 | ^~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:38,482 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.h:490:10: note: candidates are: ‘template void MultidimArray::resize(const MultidimArray&, bool) [with T = long int]’ 2026-02-13T01:58:38,483 490 | void resize(const MultidimArray &v, bool copy = true) 2026-02-13T01:58:38,484 | ^~~~~~ 2026-02-13T01:58:38,485 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.cpp:983:6: note: ‘void MultidimArray::resize(size_t, size_t, size_t, size_t, bool) [with T = long int; size_t = unsigned int]’ 2026-02-13T01:58:38,486 983 | void MultidimArray::resize(size_t Ndim, size_t Zdim, size_t Ydim, size_t Xdim, bool copy) 2026-02-13T01:58:38,486 | ^~~~~~~~~~~~~~~~ 2026-02-13T01:58:38,487 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:761:10: note: ‘void MultidimArrayBase::resize(size_t, size_t, size_t)’ 2026-02-13T01:58:38,493 761 | void resize(size_t Zdim, size_t Ydim, size_t Xdim) 2026-02-13T01:58:38,494 | ^~~~~~ 2026-02-13T01:58:38,495 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:773:10: note: ‘void MultidimArrayBase::resize(size_t, size_t)’ 2026-02-13T01:58:38,496 773 | void resize(size_t Ydim, size_t Xdim) 2026-02-13T01:58:38,497 | ^~~~~~ 2026-02-13T01:58:38,498 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:785:10: note: ‘void MultidimArrayBase::resize(size_t)’ 2026-02-13T01:58:38,499 785 | void resize(size_t Xdim) 2026-02-13T01:58:38,500 | ^~~~~~ 2026-02-13T01:58:38,502 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:793:10: note: ‘void MultidimArrayBase::resize(ArrayDim&, bool)’ 2026-02-13T01:58:38,503 793 | void resize(ArrayDim &adim, bool copy=true); 2026-02-13T01:58:38,504 | ^~~~~~ 2026-02-13T01:58:38,505 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.cpp:1156:15: error: template-id ‘resize<>’ for ‘void MultidimArray::resize(long unsigned int, long unsigned int, long unsigned int, long unsigned int, bool)’ does not match any template declaration 2026-02-13T01:58:38,506 1156 | template void MultidimArray::resize(unsigned long, unsigned long, unsigned long, unsigned long, bool); 2026-02-13T01:58:38,506 | ^~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:38,507 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.h:490:10: note: candidates are: ‘template void MultidimArray::resize(const MultidimArray&, bool) [with T = int]’ 2026-02-13T01:58:38,509 490 | void resize(const MultidimArray &v, bool copy = true) 2026-02-13T01:58:38,510 | ^~~~~~ 2026-02-13T01:58:38,511 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.h:475:10: note: ‘void MultidimArray::resize(size_t, size_t, size_t, size_t, bool) [with T = int; size_t = unsigned int]’ 2026-02-13T01:58:38,512 475 | void resize(size_t Ndim, size_t Zdim, size_t Ydim, size_t Xdim, bool copy=true); 2026-02-13T01:58:38,513 | ^~~~~~ 2026-02-13T01:58:38,514 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:761:10: note: ‘void MultidimArrayBase::resize(size_t, size_t, size_t)’ 2026-02-13T01:58:38,515 761 | void resize(size_t Zdim, size_t Ydim, size_t Xdim) 2026-02-13T01:58:38,516 | ^~~~~~ 2026-02-13T01:58:38,517 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:773:10: note: ‘void MultidimArrayBase::resize(size_t, size_t)’ 2026-02-13T01:58:38,517 773 | void resize(size_t Ydim, size_t Xdim) 2026-02-13T01:58:38,518 | ^~~~~~ 2026-02-13T01:58:38,519 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:785:10: note: ‘void MultidimArrayBase::resize(size_t)’ 2026-02-13T01:58:38,520 785 | void resize(size_t Xdim) 2026-02-13T01:58:38,521 | ^~~~~~ 2026-02-13T01:58:38,522 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:793:10: note: ‘void MultidimArrayBase::resize(ArrayDim&, bool)’ 2026-02-13T01:58:38,523 793 | void resize(ArrayDim &adim, bool copy=true); 2026-02-13T01:58:38,524 | ^~~~~~ 2026-02-13T01:58:38,525 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.cpp:1157:15: error: template-id ‘resize<>’ for ‘void MultidimArray::resize(long unsigned int, long unsigned int, long unsigned int, long unsigned int, bool)’ does not match any template declaration 2026-02-13T01:58:38,525 1157 | template void MultidimArray::resize(unsigned long, unsigned long, unsigned long, unsigned long, bool); 2026-02-13T01:58:38,526 | ^~~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:38,527 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.h:490:10: note: candidates are: ‘template void MultidimArray::resize(const MultidimArray&, bool) [with T = short int]’ 2026-02-13T01:58:38,528 490 | void resize(const MultidimArray &v, bool copy = true) 2026-02-13T01:58:38,529 | ^~~~~~ 2026-02-13T01:58:38,530 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.cpp:983:6: note: ‘void MultidimArray::resize(size_t, size_t, size_t, size_t, bool) [with T = short int; size_t = unsigned int]’ 2026-02-13T01:58:38,531 983 | void MultidimArray::resize(size_t Ndim, size_t Zdim, size_t Ydim, size_t Xdim, bool copy) 2026-02-13T01:58:38,532 | ^~~~~~~~~~~~~~~~ 2026-02-13T01:58:38,533 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:761:10: note: ‘void MultidimArrayBase::resize(size_t, size_t, size_t)’ 2026-02-13T01:58:38,534 761 | void resize(size_t Zdim, size_t Ydim, size_t Xdim) 2026-02-13T01:58:38,535 | ^~~~~~ 2026-02-13T01:58:38,536 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:773:10: note: ‘void MultidimArrayBase::resize(size_t, size_t)’ 2026-02-13T01:58:38,537 773 | void resize(size_t Ydim, size_t Xdim) 2026-02-13T01:58:38,538 | ^~~~~~ 2026-02-13T01:58:38,539 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:785:10: note: ‘void MultidimArrayBase::resize(size_t)’ 2026-02-13T01:58:38,540 785 | void resize(size_t Xdim) 2026-02-13T01:58:38,541 | ^~~~~~ 2026-02-13T01:58:38,542 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:793:10: note: ‘void MultidimArrayBase::resize(ArrayDim&, bool)’ 2026-02-13T01:58:38,543 793 | void resize(ArrayDim &adim, bool copy=true); 2026-02-13T01:58:38,544 | ^~~~~~ 2026-02-13T01:58:38,544 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.cpp:1158:15: error: template-id ‘resize<>’ for ‘void MultidimArray::resize(long unsigned int, long unsigned int, long unsigned int, long unsigned int, bool)’ does not match any template declaration 2026-02-13T01:58:38,545 1158 | template void MultidimArray::resize(unsigned long, unsigned long, unsigned long, unsigned long, bool); 2026-02-13T01:58:38,546 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:38,547 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.h:490:10: note: candidates are: ‘template void MultidimArray::resize(const MultidimArray&, bool) [with T = unsigned char]’ 2026-02-13T01:58:38,548 490 | void resize(const MultidimArray &v, bool copy = true) 2026-02-13T01:58:38,563 | ^~~~~~ 2026-02-13T01:58:38,564 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.cpp:983:6: note: ‘void MultidimArray::resize(size_t, size_t, size_t, size_t, bool) [with T = unsigned char; size_t = unsigned int]’ 2026-02-13T01:58:38,564 983 | void MultidimArray::resize(size_t Ndim, size_t Zdim, size_t Ydim, size_t Xdim, bool copy) 2026-02-13T01:58:38,565 | ^~~~~~~~~~~~~~~~ 2026-02-13T01:58:38,566 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:761:10: note: ‘void MultidimArrayBase::resize(size_t, size_t, size_t)’ 2026-02-13T01:58:38,567 761 | void resize(size_t Zdim, size_t Ydim, size_t Xdim) 2026-02-13T01:58:38,568 | ^~~~~~ 2026-02-13T01:58:38,569 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:773:10: note: ‘void MultidimArrayBase::resize(size_t, size_t)’ 2026-02-13T01:58:38,570 773 | void resize(size_t Ydim, size_t Xdim) 2026-02-13T01:58:38,571 | ^~~~~~ 2026-02-13T01:58:38,572 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:785:10: note: ‘void MultidimArrayBase::resize(size_t)’ 2026-02-13T01:58:38,573 785 | void resize(size_t Xdim) 2026-02-13T01:58:38,574 | ^~~~~~ 2026-02-13T01:58:38,575 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:793:10: note: ‘void MultidimArrayBase::resize(ArrayDim&, bool)’ 2026-02-13T01:58:38,576 793 | void resize(ArrayDim &adim, bool copy=true); 2026-02-13T01:58:38,577 | ^~~~~~ 2026-02-13T01:58:38,578 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.cpp:1159:15: error: template-id ‘resize<>’ for ‘void MultidimArray::resize(long unsigned int, long unsigned int, long unsigned int, long unsigned int, bool)’ does not match any template declaration 2026-02-13T01:58:38,579 1159 | template void MultidimArray::resize(unsigned long, unsigned long, unsigned long, unsigned long, bool); 2026-02-13T01:58:38,580 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:38,581 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.h:490:10: note: candidates are: ‘template void MultidimArray::resize(const MultidimArray&, bool) [with T = unsigned int]’ 2026-02-13T01:58:38,582 490 | void resize(const MultidimArray &v, bool copy = true) 2026-02-13T01:58:38,583 | ^~~~~~ 2026-02-13T01:58:38,584 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.cpp:983:6: note: ‘void MultidimArray::resize(size_t, size_t, size_t, size_t, bool) [with T = unsigned int; size_t = unsigned int]’ 2026-02-13T01:58:38,585 983 | void MultidimArray::resize(size_t Ndim, size_t Zdim, size_t Ydim, size_t Xdim, bool copy) 2026-02-13T01:58:38,586 | ^~~~~~~~~~~~~~~~ 2026-02-13T01:58:38,587 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:761:10: note: ‘void MultidimArrayBase::resize(size_t, size_t, size_t)’ 2026-02-13T01:58:38,588 761 | void resize(size_t Zdim, size_t Ydim, size_t Xdim) 2026-02-13T01:58:38,589 | ^~~~~~ 2026-02-13T01:58:38,590 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:773:10: note: ‘void MultidimArrayBase::resize(size_t, size_t)’ 2026-02-13T01:58:38,591 773 | void resize(size_t Ydim, size_t Xdim) 2026-02-13T01:58:38,592 | ^~~~~~ 2026-02-13T01:58:38,592 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:785:10: note: ‘void MultidimArrayBase::resize(size_t)’ 2026-02-13T01:58:38,593 785 | void resize(size_t Xdim) 2026-02-13T01:58:38,594 | ^~~~~~ 2026-02-13T01:58:38,595 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:793:10: note: ‘void MultidimArrayBase::resize(ArrayDim&, bool)’ 2026-02-13T01:58:38,596 793 | void resize(ArrayDim &adim, bool copy=true); 2026-02-13T01:58:38,597 | ^~~~~~ 2026-02-13T01:58:38,598 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.cpp:1160:15: error: template-id ‘resize<>’ for ‘void MultidimArray::resize(long unsigned int, long unsigned int, long unsigned int, long unsigned int, bool)’ does not match any template declaration 2026-02-13T01:58:38,599 1160 | template void MultidimArray::resize(unsigned long, unsigned long, unsigned long, unsigned long, bool); 2026-02-13T01:58:38,600 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:38,601 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.h:490:10: note: candidates are: ‘template void MultidimArray::resize(const MultidimArray&, bool) [with T = long unsigned int]’ 2026-02-13T01:58:38,602 490 | void resize(const MultidimArray &v, bool copy = true) 2026-02-13T01:58:38,603 | ^~~~~~ 2026-02-13T01:58:38,604 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.cpp:983:6: note: ‘void MultidimArray::resize(size_t, size_t, size_t, size_t, bool) [with T = long unsigned int; size_t = unsigned int]’ 2026-02-13T01:58:38,605 983 | void MultidimArray::resize(size_t Ndim, size_t Zdim, size_t Ydim, size_t Xdim, bool copy) 2026-02-13T01:58:38,607 | ^~~~~~~~~~~~~~~~ 2026-02-13T01:58:38,607 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:761:10: note: ‘void MultidimArrayBase::resize(size_t, size_t, size_t)’ 2026-02-13T01:58:38,608 761 | void resize(size_t Zdim, size_t Ydim, size_t Xdim) 2026-02-13T01:58:38,609 | ^~~~~~ 2026-02-13T01:58:38,610 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:773:10: note: ‘void MultidimArrayBase::resize(size_t, size_t)’ 2026-02-13T01:58:38,611 773 | void resize(size_t Ydim, size_t Xdim) 2026-02-13T01:58:38,612 | ^~~~~~ 2026-02-13T01:58:38,614 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:785:10: note: ‘void MultidimArrayBase::resize(size_t)’ 2026-02-13T01:58:38,615 785 | void resize(size_t Xdim) 2026-02-13T01:58:38,616 | ^~~~~~ 2026-02-13T01:58:38,617 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:793:10: note: ‘void MultidimArrayBase::resize(ArrayDim&, bool)’ 2026-02-13T01:58:38,618 793 | void resize(ArrayDim &adim, bool copy=true); 2026-02-13T01:58:38,619 | ^~~~~~ 2026-02-13T01:58:38,620 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.cpp:1161:15: error: template-id ‘resize<>’ for ‘void MultidimArray::resize(long unsigned int, long unsigned int, long unsigned int, long unsigned int, bool)’ does not match any template declaration 2026-02-13T01:58:38,621 1161 | template void MultidimArray::resize(unsigned long, unsigned long, unsigned long, unsigned long, bool); 2026-02-13T01:58:38,621 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:38,622 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.h:490:10: note: candidates are: ‘template void MultidimArray::resize(const MultidimArray&, bool) [with T = short unsigned int]’ 2026-02-13T01:58:38,623 490 | void resize(const MultidimArray &v, bool copy = true) 2026-02-13T01:58:38,624 | ^~~~~~ 2026-02-13T01:58:38,625 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.cpp:983:6: note: ‘void MultidimArray::resize(size_t, size_t, size_t, size_t, bool) [with T = short unsigned int; size_t = unsigned int]’ 2026-02-13T01:58:38,626 983 | void MultidimArray::resize(size_t Ndim, size_t Zdim, size_t Ydim, size_t Xdim, bool copy) 2026-02-13T01:58:38,627 | ^~~~~~~~~~~~~~~~ 2026-02-13T01:58:38,627 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:761:10: note: ‘void MultidimArrayBase::resize(size_t, size_t, size_t)’ 2026-02-13T01:58:38,628 761 | void resize(size_t Zdim, size_t Ydim, size_t Xdim) 2026-02-13T01:58:38,629 | ^~~~~~ 2026-02-13T01:58:38,630 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:773:10: note: ‘void MultidimArrayBase::resize(size_t, size_t)’ 2026-02-13T01:58:38,631 773 | void resize(size_t Ydim, size_t Xdim) 2026-02-13T01:58:38,632 | ^~~~~~ 2026-02-13T01:58:38,633 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:785:10: note: ‘void MultidimArrayBase::resize(size_t)’ 2026-02-13T01:58:38,634 785 | void resize(size_t Xdim) 2026-02-13T01:58:38,635 | ^~~~~~ 2026-02-13T01:58:38,643 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:793:10: note: ‘void MultidimArrayBase::resize(ArrayDim&, bool)’ 2026-02-13T01:58:38,644 793 | void resize(ArrayDim &adim, bool copy=true); 2026-02-13T01:58:38,645 | ^~~~~~ 2026-02-13T01:58:38,646 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.cpp:1162:15: error: template-id ‘resize<>’ for ‘void MultidimArray >::resize(long unsigned int, long unsigned int, long unsigned int, long unsigned int, bool)’ does not match any template declaration 2026-02-13T01:58:38,647 1162 | template void MultidimArray>::resize(unsigned long, unsigned long, unsigned long, unsigned long, bool); 2026-02-13T01:58:38,648 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:38,649 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.h:490:10: note: candidates are: ‘template void MultidimArray::resize(const MultidimArray&, bool) [with T = std::complex]’ 2026-02-13T01:58:38,650 490 | void resize(const MultidimArray &v, bool copy = true) 2026-02-13T01:58:38,651 | ^~~~~~ 2026-02-13T01:58:38,652 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.h:475:10: note: ‘void MultidimArray::resize(size_t, size_t, size_t, size_t, bool) [with T = std::complex; size_t = unsigned int]’ 2026-02-13T01:58:38,653 475 | void resize(size_t Ndim, size_t Zdim, size_t Ydim, size_t Xdim, bool copy=true); 2026-02-13T01:58:38,654 | ^~~~~~ 2026-02-13T01:58:38,655 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:761:10: note: ‘void MultidimArrayBase::resize(size_t, size_t, size_t)’ 2026-02-13T01:58:38,655 761 | void resize(size_t Zdim, size_t Ydim, size_t Xdim) 2026-02-13T01:58:38,656 | ^~~~~~ 2026-02-13T01:58:38,657 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:773:10: note: ‘void MultidimArrayBase::resize(size_t, size_t)’ 2026-02-13T01:58:38,658 773 | void resize(size_t Ydim, size_t Xdim) 2026-02-13T01:58:38,659 | ^~~~~~ 2026-02-13T01:58:38,660 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:785:10: note: ‘void MultidimArrayBase::resize(size_t)’ 2026-02-13T01:58:38,661 785 | void resize(size_t Xdim) 2026-02-13T01:58:38,662 | ^~~~~~ 2026-02-13T01:58:38,663 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:793:10: note: ‘void MultidimArrayBase::resize(ArrayDim&, bool)’ 2026-02-13T01:58:38,663 793 | void resize(ArrayDim &adim, bool copy=true); 2026-02-13T01:58:38,664 | ^~~~~~ 2026-02-13T01:58:38,665 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.cpp:1163:15: error: template-id ‘resize<>’ for ‘void MultidimArray::resize(long unsigned int, long unsigned int, long unsigned int, long unsigned int, bool)’ does not match any template declaration 2026-02-13T01:58:38,666 1163 | template void MultidimArray::resize(unsigned long, unsigned long, unsigned long, unsigned long, bool); 2026-02-13T01:58:38,667 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:38,668 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.h:490:10: note: candidates are: ‘template void MultidimArray::resize(const MultidimArray&, bool) [with T = half_float::half]’ 2026-02-13T01:58:38,669 490 | void resize(const MultidimArray &v, bool copy = true) 2026-02-13T01:58:38,670 | ^~~~~~ 2026-02-13T01:58:38,671 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array.cpp:983:6: note: ‘void MultidimArray::resize(size_t, size_t, size_t, size_t, bool) [with T = half_float::half; size_t = unsigned int]’ 2026-02-13T01:58:38,672 983 | void MultidimArray::resize(size_t Ndim, size_t Zdim, size_t Ydim, size_t Xdim, bool copy) 2026-02-13T01:58:38,673 | ^~~~~~~~~~~~~~~~ 2026-02-13T01:58:38,674 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:761:10: note: ‘void MultidimArrayBase::resize(size_t, size_t, size_t)’ 2026-02-13T01:58:38,675 761 | void resize(size_t Zdim, size_t Ydim, size_t Xdim) 2026-02-13T01:58:38,676 | ^~~~~~ 2026-02-13T01:58:38,677 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:773:10: note: ‘void MultidimArrayBase::resize(size_t, size_t)’ 2026-02-13T01:58:38,678 773 | void resize(size_t Ydim, size_t Xdim) 2026-02-13T01:58:38,679 | ^~~~~~ 2026-02-13T01:58:38,680 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:785:10: note: ‘void MultidimArrayBase::resize(size_t)’ 2026-02-13T01:58:38,681 785 | void resize(size_t Xdim) 2026-02-13T01:58:38,682 | ^~~~~~ 2026-02-13T01:58:38,683 /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/multidim_array_base.h:793:10: note: ‘void MultidimArrayBase::resize(ArrayDim&, bool)’ 2026-02-13T01:58:38,684 793 | void resize(ArrayDim &adim, bool copy=true); 2026-02-13T01:58:38,685 | ^~~~~~ 2026-02-13T01:58:38,838 [211/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/multidim_array_base.cpp.o 2026-02-13T01:58:44,516 [212/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/metadata_extension.cpp.o 2026-02-13T01:58:48,140 [213/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/metadata_sql.cpp.o 2026-02-13T01:58:48,143 In file included from /usr/include/c++/12/vector:70, 2026-02-13T01:58:48,144 from /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/xmipp_strings.h:29, 2026-02-13T01:58:48,145 from /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/metadata_sql.h:31, 2026-02-13T01:58:48,146 from /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/metadata_sql.cpp:29: 2026-02-13T01:58:48,148 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const MDLabel&}; _Tp = MDObject; _Alloc = std::allocator]’: 2026-02-13T01:58:48,149 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2026-02-13T01:58:48,150 439 | vector<_Tp, _Alloc>:: 2026-02-13T01:58:48,151 | ^~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:48,151 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {const MDLabel&}; _Tp = MDObject; _Alloc = std::allocator]’, 2026-02-13T01:58:48,152 inlined from ‘bool MDSql::getObjectsValues(const std::vector&, std::vector&)’ at /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/metadata_sql.cpp:524:36: 2026-02-13T01:58:48,153 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-02-13T01:58:48,154 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-02-13T01:58:48,155 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:54,846 [214/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/metadata_vec.cpp.o 2026-02-13T01:58:54,846 In file included from /usr/include/c++/12/vector:70, 2026-02-13T01:58:54,847 from /usr/include/c++/12/bits/random.h:34, 2026-02-13T01:58:54,848 from /usr/include/c++/12/random:49, 2026-02-13T01:58:54,849 from /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/metadata_vec.cpp:30: 2026-02-13T01:58:54,850 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const MDObject&}; _Tp = MDObject; _Alloc = std::allocator]’: 2026-02-13T01:58:54,851 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2026-02-13T01:58:54,852 439 | vector<_Tp, _Alloc>:: 2026-02-13T01:58:54,853 | ^~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:54,854 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {const MDObject&}; _Tp = MDObject; _Alloc = std::allocator]’, 2026-02-13T01:58:54,855 inlined from ‘virtual void MetaDataVec::getColumnValues(MDLabel, std::vector&) const’ at /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/metadata_vec.cpp:368:31: 2026-02-13T01:58:54,856 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-02-13T01:58:54,857 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-02-13T01:58:54,857 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:54,858 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {MDObject}; _Tp = MDObject; _Alloc = std::allocator]’: 2026-02-13T01:58:54,859 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2026-02-13T01:58:54,859 439 | vector<_Tp, _Alloc>:: 2026-02-13T01:58:54,860 | ^~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:54,861 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {MDObject}; _Tp = MDObject; _Alloc = std::allocator]’, 2026-02-13T01:58:54,861 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = MDObject; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2026-02-13T01:58:54,862 inlined from ‘void MetaDataVec::_setRow(const MDRow&, size_t)’ at /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/metadata_vec.cpp:214:26: 2026-02-13T01:58:54,863 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-02-13T01:58:54,863 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-02-13T01:58:54,864 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:54,865 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {MDObject}; _Tp = MDObject; _Alloc = std::allocator]’, 2026-02-13T01:58:54,866 inlined from ‘void MetaDataVec::_expand(MetaDataVecRow&, size_t)’ at /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c/src/core/metadata_vec.cpp:888:25: 2026-02-13T01:58:54,867 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2026-02-13T01:58:54,867 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2026-02-13T01:58:54,868 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-02-13T01:58:57,127 [215/297] Building CXX object src/CMakeFiles/xmippLib.dir/core/metadata_static.cpp.o 2026-02-13T01:58:57,128 ninja: build stopped: subcommand failed. 2026-02-13T01:59:01,950 *** CMake build failed 2026-02-13T01:59:02,071 ERROR: [present-rich] Building wheel for pyxmipp3 (pyproject.toml) exited with 1 2026-02-13T01:59:02,085 [bold magenta]full command[/]: [blue]/usr/bin/python3 /usr/lib/python3/dist-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py build_wheel /tmp/tmpaivyvgxd[/] 2026-02-13T01:59:02,086 [bold magenta]cwd[/]: /tmp/pip-wheel-6g4zlmqs/pyxmipp3_03d8d4cfccda4510ab4a88c347b8905c 2026-02-13T01:59:02,087 Building wheel for pyxmipp3 (pyproject.toml): finished with status 'error' 2026-02-13T01:59:02,090 ERROR: Failed building wheel for pyxmipp3 2026-02-13T01:59:02,093 Failed to build pyxmipp3 2026-02-13T01:59:02,094 ERROR: Failed to build one or more wheels 2026-02-13T01:59:02,095 Exception information: 2026-02-13T01:59:02,095 Traceback (most recent call last): 2026-02-13T01:59:02,095 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 160, in exc_logging_wrapper 2026-02-13T01:59:02,095 status = run_func(*args) 2026-02-13T01:59:02,095 ^^^^^^^^^^^^^^^ 2026-02-13T01:59:02,095 File "/usr/lib/python3/dist-packages/pip/_internal/cli/req_command.py", line 247, in wrapper 2026-02-13T01:59:02,095 return func(self, options, args) 2026-02-13T01:59:02,095 ^^^^^^^^^^^^^^^^^^^^^^^^^ 2026-02-13T01:59:02,095 File "/usr/lib/python3/dist-packages/pip/_internal/commands/wheel.py", line 201, in run 2026-02-13T01:59:02,095 raise CommandError("Failed to build one or more wheels") 2026-02-13T01:59:02,095 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2026-02-13T01:59:02,100 Removed build tracker: '/tmp/pip-build-tracker-35s6d7jd'