2026-02-13T12:00:10,622 Created temporary directory: /tmp/pip-ephem-wheel-cache-t_wf27_t
2026-02-13T12:00:10,623 Created temporary directory: /tmp/pip-build-tracker-4dxusgdv
2026-02-13T12:00:10,624 Initialized build tracking at /tmp/pip-build-tracker-4dxusgdv
2026-02-13T12:00:10,625 Created build tracker: /tmp/pip-build-tracker-4dxusgdv
2026-02-13T12:00:10,625 Entered build tracker: /tmp/pip-build-tracker-4dxusgdv
2026-02-13T12:00:10,626 Created temporary directory: /tmp/pip-wheel-zh2gjlcr
2026-02-13T12:00:10,629 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-02-13T12:00:10,631 Created temporary directory: /tmp/pip-ephem-wheel-cache-1rz8_v5s
2026-02-13T12:00:10,655 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-02-13T12:00:10,658 2 location(s) to search for versions of boltzgen:
2026-02-13T12:00:10,658 * https://pypi.org/simple/boltzgen/
2026-02-13T12:00:10,658 * https://www.piwheels.org/simple/boltzgen/
2026-02-13T12:00:10,659 Fetching project page and analyzing links: https://pypi.org/simple/boltzgen/
2026-02-13T12:00:10,660 Getting page https://pypi.org/simple/boltzgen/
2026-02-13T12:00:10,661 Found index url https://pypi.org/simple
2026-02-13T12:00:10,876 Fetched page https://pypi.org/simple/boltzgen/ as application/vnd.pypi.simple.v1+json
2026-02-13T12:00:10,881   Skipping link: No binaries permitted for boltzgen: https://files.pythonhosted.org/packages/63/90/abce182b30c62f13029523927c04820cfa69e03635c4ab7f2ca01aa64fc8/boltzgen-0.1.0-py3-none-any.whl (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.9)
2026-02-13T12:00:10,883   Found link https://files.pythonhosted.org/packages/19/6d/3259f594bdc5688261f220b0280facea3a2e497e34609c1d358c40ff26df/boltzgen-0.1.0.tar.gz (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.9), version: 0.1.0
2026-02-13T12:00:10,883   Skipping link: No binaries permitted for boltzgen: https://files.pythonhosted.org/packages/b9/e1/bea73eb825594a48e824a59ea2484c0748020a9713c5b2503d7cfe033c2b/boltzgen-0.1.1-py3-none-any.whl (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.9)
2026-02-13T12:00:10,884   Found link https://files.pythonhosted.org/packages/78/94/91e0892caf7d08ad1ee432f2d64d07f0bb4cc5fa53a010b2995db7a90dbf/boltzgen-0.1.1.tar.gz (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.9), version: 0.1.1
2026-02-13T12:00:10,885   Skipping link: No binaries permitted for boltzgen: https://files.pythonhosted.org/packages/74/06/6834e94921b9a5c978a3b6014e20db1dc528e5b67d0dcad0f8f47836908c/boltzgen-0.1.2-py3-none-any.whl (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.9)
2026-02-13T12:00:10,886   Found link https://files.pythonhosted.org/packages/20/02/6579821c7da06745452f2ecb95605dce1b8de1658d1dd4be5c6c3b970208/boltzgen-0.1.2.tar.gz (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.9), version: 0.1.2
2026-02-13T12:00:10,886   Skipping link: No binaries permitted for boltzgen: https://files.pythonhosted.org/packages/c0/a0/332273a340fe1736c69fb400c653794e3aa0f8ecc8dbe7b3b5eef1cd1511/boltzgen-0.1.3-py3-none-any.whl (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.9)
2026-02-13T12:00:10,887   Found link https://files.pythonhosted.org/packages/d1/ff/ffc1886142c710039ef8c9ec9e9646efe78e79371d51375b76787023d925/boltzgen-0.1.3.tar.gz (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.9), version: 0.1.3
2026-02-13T12:00:10,888   Skipping link: No binaries permitted for boltzgen: https://files.pythonhosted.org/packages/ab/9c/41583212ccc836d5832e0c7a6def8bb4e34c09ec29fee569e8c823ee6388/boltzgen-0.1.4-py3-none-any.whl (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.9)
2026-02-13T12:00:10,889   Found link https://files.pythonhosted.org/packages/39/5c/0c5cb924934b1ec2436e7fa2620ea8729035ca89b6272caa97e2ce443d30/boltzgen-0.1.4.tar.gz (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.9), version: 0.1.4
2026-02-13T12:00:10,890   Skipping link: No binaries permitted for boltzgen: https://files.pythonhosted.org/packages/b9/99/6dd2e0e777332886761c2cce2da02a3a1c5e216911a464f8c68b69b28ca0/boltzgen-0.1.5-py3-none-any.whl (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.11)
2026-02-13T12:00:10,891   Found link https://files.pythonhosted.org/packages/e6/f8/2b5c1f0f45ba484a1918e79c4d24cec8e7097b427af7d87696a64717d5ac/boltzgen-0.1.5.tar.gz (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.11), version: 0.1.5
2026-02-13T12:00:10,891   Skipping link: No binaries permitted for boltzgen: https://files.pythonhosted.org/packages/3e/88/4435438f149e36eb0bac1a15450e3de3d94129a1bb1b76e9c288dbcf1bc4/boltzgen-0.1.6-py3-none-any.whl (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.11)
2026-02-13T12:00:10,892   Found link https://files.pythonhosted.org/packages/f4/73/c55d02b829c4f12918ef1ff22f1752300b3a9dc8a19a9679dc6b30344cb9/boltzgen-0.1.6.tar.gz (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.11), version: 0.1.6
2026-02-13T12:00:10,893   Skipping link: No binaries permitted for boltzgen: https://files.pythonhosted.org/packages/4e/8d/203bda8dee5285f044a212d540a9faa4ec9502d2688f8617f2bf49501ba6/boltzgen-0.1.7-py3-none-any.whl (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.11)
2026-02-13T12:00:10,894   Found link https://files.pythonhosted.org/packages/90/7a/b6b99cb1b1f9a776746aeb29e9ecb49197b1f83a716b61fc71b217510600/boltzgen-0.1.7.tar.gz (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.11), version: 0.1.7
2026-02-13T12:00:10,894   Skipping link: No binaries permitted for boltzgen: https://files.pythonhosted.org/packages/92/9b/8d2dc07b96cf035ca328113487a7001de080f4626877e1f61b6e4ca4e024/boltzgen-0.1.8-py3-none-any.whl (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.11)
2026-02-13T12:00:10,895   Found link https://files.pythonhosted.org/packages/76/e5/08c09469e5cae238c0b706b527f5bb34b63eee433bb5d8df67a165deba40/boltzgen-0.1.8.tar.gz (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.11), version: 0.1.8
2026-02-13T12:00:10,896   Skipping link: No binaries permitted for boltzgen: https://files.pythonhosted.org/packages/8a/50/894b5a7fa4c2684ccab13bdf51d6ac6e1e3fc3d0d324d886c16760d76ff1/boltzgen-0.1.9-py3-none-any.whl (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.11)
2026-02-13T12:00:10,897   Found link https://files.pythonhosted.org/packages/02/7b/00d9d7e65a0ce01e49dd46b9690de7fcc6ab18a3cab882e04e2586ec8b35/boltzgen-0.1.9.tar.gz (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.11), version: 0.1.9
2026-02-13T12:00:10,897   Skipping link: No binaries permitted for boltzgen: https://files.pythonhosted.org/packages/0d/97/843cd786108ed1c91fe1be9a53c5b03e2f25f1063057560faa561bc42f47/boltzgen-0.2.0-py3-none-any.whl (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.11)
2026-02-13T12:00:10,898   Found link https://files.pythonhosted.org/packages/29/d5/f3c32d1df4c2f0b4bebe26ba16070760aa8963e239c208d52f0ca4f8af2f/boltzgen-0.2.0.tar.gz (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.11), version: 0.2.0
2026-02-13T12:00:10,899   Skipping link: No binaries permitted for boltzgen: https://files.pythonhosted.org/packages/21/ae/08c697aebb50d23f38cf66f1585678fc9e44b4ecf30bb539b8a66492dff0/boltzgen-0.3.0-py3-none-any.whl (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.11)
2026-02-13T12:00:10,900   Found link https://files.pythonhosted.org/packages/73/33/64584e1321a0619e33adf4a1c114a049cccd501904888d9528a718a5c324/boltzgen-0.3.0.tar.gz (from https://pypi.org/simple/boltzgen/) (requires-python:>=3.11), version: 0.3.0
2026-02-13T12:00:10,900 Fetching project page and analyzing links: https://www.piwheels.org/simple/boltzgen/
2026-02-13T12:00:10,901 Getting page https://www.piwheels.org/simple/boltzgen/
2026-02-13T12:00:10,902 Found index url https://www.piwheels.org/simple
2026-02-13T12:00:11,061 Fetched page https://www.piwheels.org/simple/boltzgen/ as text/html
2026-02-13T12:00:11,066   Skipping link: No binaries permitted for boltzgen: https://www.piwheels.org/simple/boltzgen/boltzgen-0.2.0-py3-none-any.whl#sha256=46da7ced73e2aa222adc843f888a4cd245df9aaa959b7a43dbe2f7b0997422e5 (from https://www.piwheels.org/simple/boltzgen/) (requires-python:>=3.11)
2026-02-13T12:00:11,066   Skipping link: No binaries permitted for boltzgen: https://www.piwheels.org/simple/boltzgen/boltzgen-0.1.9-py3-none-any.whl#sha256=b9644c729d1a6aa8bd56bc5df376f70076255b8f1fee1f4c5a9a9a0738c9a88a (from https://www.piwheels.org/simple/boltzgen/) (requires-python:>=3.11)
2026-02-13T12:00:11,067   Skipping link: No binaries permitted for boltzgen: https://www.piwheels.org/simple/boltzgen/boltzgen-0.1.8-py3-none-any.whl#sha256=06ab9d6e376a074706bf5ec577b59fd7f59d56f87b79948f5f1b5b0e0f45ccdd (from https://www.piwheels.org/simple/boltzgen/) (requires-python:>=3.11)
2026-02-13T12:00:11,067   Skipping link: No binaries permitted for boltzgen: https://www.piwheels.org/simple/boltzgen/boltzgen-0.1.7-py3-none-any.whl#sha256=9e026a4b483e47bd92a088f7fc2ba1b3bc84e74d93d99982f7a305330a0f38be (from https://www.piwheels.org/simple/boltzgen/) (requires-python:>=3.11)
2026-02-13T12:00:11,068   Skipping link: No binaries permitted for boltzgen: https://www.piwheels.org/simple/boltzgen/boltzgen-0.1.6-py3-none-any.whl#sha256=be8bb6bfb8c8a6a11498256d93a2147cd7561069dac561bb198f3c941231c70b (from https://www.piwheels.org/simple/boltzgen/) (requires-python:>=3.11)
2026-02-13T12:00:11,068   Skipping link: No binaries permitted for boltzgen: https://www.piwheels.org/simple/boltzgen/boltzgen-0.1.5-py3-none-any.whl#sha256=567e42f3cd1f8a8c24d7087b6a403d805594f6e62686348be18d8e7cfdddbec8 (from https://www.piwheels.org/simple/boltzgen/) (requires-python:>=3.11)
2026-02-13T12:00:11,069   Skipping link: No binaries permitted for boltzgen: https://www.piwheels.org/simple/boltzgen/boltzgen-0.1.4-py3-none-any.whl#sha256=3af2f20f1a3611f969104650791392db2e145fc24fb035a6ca66e716637576dc (from https://www.piwheels.org/simple/boltzgen/) (requires-python:>=3.9)
2026-02-13T12:00:11,069   Skipping link: No binaries permitted for boltzgen: https://www.piwheels.org/simple/boltzgen/boltzgen-0.1.3-py3-none-any.whl#sha256=1029da6f74a8b125d8c6c34beb6b0a7f71a3d57461631c4dc6f788b573c10247 (from https://www.piwheels.org/simple/boltzgen/) (requires-python:>=3.9)
2026-02-13T12:00:11,070   Skipping link: No binaries permitted for boltzgen: https://archive1.piwheels.org/simple/boltzgen/boltzgen-0.1.2-py3-none-any.whl#sha256=540dfba80316dc74e1622a369e825b5debdf02aa7cb197ebbb311186113017c4 (from https://www.piwheels.org/simple/boltzgen/) (requires-python:>=3.9)
2026-02-13T12:00:11,070   Skipping link: No binaries permitted for boltzgen: https://archive1.piwheels.org/simple/boltzgen/boltzgen-0.1.1-py3-none-any.whl#sha256=ba441ae54add47197ca07443c4bb7468bb6e30ae1e94224c21360afb80fd6215 (from https://www.piwheels.org/simple/boltzgen/) (requires-python:>=3.9)
2026-02-13T12:00:11,071   Skipping link: No binaries permitted for boltzgen: https://archive1.piwheels.org/simple/boltzgen/boltzgen-0.1.0-py3-none-any.whl#sha256=4c742030a0a07bb98c68ee543aad9b9d01c4a673e62ba78cab124ed43a91b644 (from https://www.piwheels.org/simple/boltzgen/) (requires-python:>=3.9)
2026-02-13T12:00:11,071 Skipping link: not a file: https://www.piwheels.org/simple/boltzgen/
2026-02-13T12:00:11,072 Skipping link: not a file: https://pypi.org/simple/boltzgen/
2026-02-13T12:00:11,094 Given no hashes to check 1 links for project 'boltzgen': discarding no candidates
2026-02-13T12:00:11,114 Collecting boltzgen==0.3.0
2026-02-13T12:00:11,116   Created temporary directory: /tmp/pip-unpack-w4e3mwhy
2026-02-13T12:00:11,333   Downloading boltzgen-0.3.0.tar.gz (304 kB)
2026-02-13T12:00:11,729   Added boltzgen==0.3.0 from https://files.pythonhosted.org/packages/73/33/64584e1321a0619e33adf4a1c114a049cccd501904888d9528a718a5c324/boltzgen-0.3.0.tar.gz to build tracker '/tmp/pip-build-tracker-4dxusgdv'
2026-02-13T12:00:11,735   Created temporary directory: /tmp/pip-build-env-oug_cpaf
2026-02-13T12:00:11,740   Installing build dependencies: started
2026-02-13T12:00:11,741   Running command pip subprocess to install build dependencies
2026-02-13T12:00:12,901   Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11)
2026-02-13T12:00:13,525   DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-02-13T12:00:13,548   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-02-13T12:00:15,275   Collecting setuptools>=61
2026-02-13T12:00:15,359     Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.0-py3-none-any.whl (1.0 MB)
2026-02-13T12:00:18,376   Installing collected packages: setuptools
2026-02-13T12:00:21,409   Successfully installed setuptools-82.0.0
2026-02-13T12:00:21,677   Installing build dependencies: finished with status 'done'
2026-02-13T12:00:21,683   Getting requirements to build wheel: started
2026-02-13T12:00:21,685   Running command Getting requirements to build wheel
2026-02-13T12:00:22,420   running egg_info
2026-02-13T12:00:22,426   writing src/boltzgen.egg-info/PKG-INFO
2026-02-13T12:00:22,431   writing dependency_links to src/boltzgen.egg-info/dependency_links.txt
2026-02-13T12:00:22,433   writing entry points to src/boltzgen.egg-info/entry_points.txt
2026-02-13T12:00:22,437   writing requirements to src/boltzgen.egg-info/requires.txt
2026-02-13T12:00:22,438   writing top-level names to src/boltzgen.egg-info/top_level.txt
2026-02-13T12:00:22,494   reading manifest file 'src/boltzgen.egg-info/SOURCES.txt'
2026-02-13T12:00:22,502   adding license file 'LICENSE'
2026-02-13T12:00:22,510   writing manifest file 'src/boltzgen.egg-info/SOURCES.txt'
2026-02-13T12:00:22,608   Getting requirements to build wheel: finished with status 'done'
2026-02-13T12:00:22,612   Created temporary directory: /tmp/pip-modern-metadata-cnja01zk
2026-02-13T12:00:22,616   Preparing metadata (pyproject.toml): started
2026-02-13T12:00:22,618   Running command Preparing metadata (pyproject.toml)
2026-02-13T12:00:23,288   running dist_info
2026-02-13T12:00:23,298   creating /tmp/pip-modern-metadata-cnja01zk/boltzgen.egg-info
2026-02-13T12:00:23,299   writing /tmp/pip-modern-metadata-cnja01zk/boltzgen.egg-info/PKG-INFO
2026-02-13T12:00:23,305   writing dependency_links to /tmp/pip-modern-metadata-cnja01zk/boltzgen.egg-info/dependency_links.txt
2026-02-13T12:00:23,306   writing entry points to /tmp/pip-modern-metadata-cnja01zk/boltzgen.egg-info/entry_points.txt
2026-02-13T12:00:23,310   writing requirements to /tmp/pip-modern-metadata-cnja01zk/boltzgen.egg-info/requires.txt
2026-02-13T12:00:23,311   writing top-level names to /tmp/pip-modern-metadata-cnja01zk/boltzgen.egg-info/top_level.txt
2026-02-13T12:00:23,312   writing manifest file '/tmp/pip-modern-metadata-cnja01zk/boltzgen.egg-info/SOURCES.txt'
2026-02-13T12:00:23,360   reading manifest file '/tmp/pip-modern-metadata-cnja01zk/boltzgen.egg-info/SOURCES.txt'
2026-02-13T12:00:23,362   adding license file 'LICENSE'
2026-02-13T12:00:23,368   writing manifest file '/tmp/pip-modern-metadata-cnja01zk/boltzgen.egg-info/SOURCES.txt'
2026-02-13T12:00:23,369   creating '/tmp/pip-modern-metadata-cnja01zk/boltzgen-0.3.0.dist-info'
2026-02-13T12:00:23,493   Preparing metadata (pyproject.toml): finished with status 'done'
2026-02-13T12:00:23,498   Source in /tmp/pip-wheel-zh2gjlcr/boltzgen_c3341db456064894be40bb785efda2be has version 0.3.0, which satisfies requirement boltzgen==0.3.0 from https://files.pythonhosted.org/packages/73/33/64584e1321a0619e33adf4a1c114a049cccd501904888d9528a718a5c324/boltzgen-0.3.0.tar.gz
2026-02-13T12:00:23,499   Removed boltzgen==0.3.0 from https://files.pythonhosted.org/packages/73/33/64584e1321a0619e33adf4a1c114a049cccd501904888d9528a718a5c324/boltzgen-0.3.0.tar.gz from build tracker '/tmp/pip-build-tracker-4dxusgdv'
2026-02-13T12:00:23,504 Created temporary directory: /tmp/pip-unpack-3x2ax0pf
2026-02-13T12:00:23,505 Building wheels for collected packages: boltzgen
2026-02-13T12:00:23,509   Created temporary directory: /tmp/pip-wheel-j3y634ab
2026-02-13T12:00:23,510   Destination directory: /tmp/pip-wheel-j3y634ab
2026-02-13T12:00:23,512   Building wheel for boltzgen (pyproject.toml): started
2026-02-13T12:00:23,513   Running command Building wheel for boltzgen (pyproject.toml)
2026-02-13T12:00:24,145   running bdist_wheel
2026-02-13T12:00:24,162   running build
2026-02-13T12:00:24,162   running build_py
2026-02-13T12:00:24,168   creating build/lib/boltzgen
2026-02-13T12:00:24,170   copying src/boltzgen/__init__.py -> build/lib/boltzgen
2026-02-13T12:00:24,172   creating build/lib/boltzgen/data
2026-02-13T12:00:24,173   copying src/boltzgen/data/data.py -> build/lib/boltzgen/data
2026-02-13T12:00:24,177   copying src/boltzgen/data/pad.py -> build/lib/boltzgen/data
2026-02-13T12:00:24,179   copying src/boltzgen/data/mol.py -> build/lib/boltzgen/data
2026-02-13T12:00:24,182   copying src/boltzgen/data/rmsd_computation.py -> build/lib/boltzgen/data
2026-02-13T12:00:24,184   copying src/boltzgen/data/const.py -> build/lib/boltzgen/data
2026-02-13T12:00:24,187   copying src/boltzgen/data/__init__.py -> build/lib/boltzgen/data
2026-02-13T12:00:24,190   creating build/lib/boltzgen/model
2026-02-13T12:00:24,191   copying src/boltzgen/model/__init__.py -> build/lib/boltzgen/model
2026-02-13T12:00:24,193   creating build/lib/boltzgen/cli
2026-02-13T12:00:24,194   copying src/boltzgen/cli/boltzgen.py -> build/lib/boltzgen/cli
2026-02-13T12:00:24,197   copying src/boltzgen/cli/__init__.py -> build/lib/boltzgen/cli
2026-02-13T12:00:24,199   creating build/lib/boltzgen/resources
2026-02-13T12:00:24,200   copying src/boltzgen/resources/main.py -> build/lib/boltzgen/resources
2026-02-13T12:00:24,203   creating build/lib/boltzgen/utils
2026-02-13T12:00:24,203   copying src/boltzgen/utils/quiet.py -> build/lib/boltzgen/utils
2026-02-13T12:00:24,205   copying src/boltzgen/utils/pipeline_progress_bar.py -> build/lib/boltzgen/utils
2026-02-13T12:00:24,208   copying src/boltzgen/utils/__init__.py -> build/lib/boltzgen/utils
2026-02-13T12:00:24,210   creating build/lib/boltzgen/task
2026-02-13T12:00:24,211   copying src/boltzgen/task/task.py -> build/lib/boltzgen/task
2026-02-13T12:00:24,213   copying src/boltzgen/task/__init__.py -> build/lib/boltzgen/task
2026-02-13T12:00:24,214   creating build/lib/boltzgen/data/template
2026-02-13T12:00:24,215   copying src/boltzgen/data/template/features.py -> build/lib/boltzgen/data/template
2026-02-13T12:00:24,217   copying src/boltzgen/data/template/__init__.py -> build/lib/boltzgen/data/template
2026-02-13T12:00:24,219   creating build/lib/boltzgen/data/sample
2026-02-13T12:00:24,220   copying src/boltzgen/data/sample/sampler.py -> build/lib/boltzgen/data/sample
2026-02-13T12:00:24,222   copying src/boltzgen/data/sample/cluster.py -> build/lib/boltzgen/data/sample
2026-02-13T12:00:24,225   copying src/boltzgen/data/sample/__init__.py -> build/lib/boltzgen/data/sample
2026-02-13T12:00:24,227   creating build/lib/boltzgen/data/select
2026-02-13T12:00:24,228   copying src/boltzgen/data/select/selector.py -> build/lib/boltzgen/data/select
2026-02-13T12:00:24,230   copying src/boltzgen/data/select/protein.py -> build/lib/boltzgen/data/select
2026-02-13T12:00:24,233   copying src/boltzgen/data/select/__init__.py -> build/lib/boltzgen/data/select
2026-02-13T12:00:24,235   creating build/lib/boltzgen/data/tokenize
2026-02-13T12:00:24,236   copying src/boltzgen/data/tokenize/tokenizer.py -> build/lib/boltzgen/data/tokenize
2026-02-13T12:00:24,239   copying src/boltzgen/data/tokenize/__init__.py -> build/lib/boltzgen/data/tokenize
2026-02-13T12:00:24,241   creating build/lib/boltzgen/data/feature
2026-02-13T12:00:24,242   copying src/boltzgen/data/feature/featurizer.py -> build/lib/boltzgen/data/feature
2026-02-13T12:00:24,246   copying src/boltzgen/data/feature/__init__.py -> build/lib/boltzgen/data/feature
2026-02-13T12:00:24,248   creating build/lib/boltzgen/data/parse
2026-02-13T12:00:24,249   copying src/boltzgen/data/parse/mmcif.py -> build/lib/boltzgen/data/parse
2026-02-13T12:00:24,252   copying src/boltzgen/data/parse/pdb_parser.py -> build/lib/boltzgen/data/parse
2026-02-13T12:00:24,254   copying src/boltzgen/data/parse/a3m.py -> build/lib/boltzgen/data/parse
2026-02-13T12:00:24,256   copying src/boltzgen/data/parse/schema.py -> build/lib/boltzgen/data/parse
2026-02-13T12:00:24,259   copying src/boltzgen/data/parse/__init__.py -> build/lib/boltzgen/data/parse
2026-02-13T12:00:24,261   creating build/lib/boltzgen/data/write
2026-02-13T12:00:24,262   copying src/boltzgen/data/write/mmcif.py -> build/lib/boltzgen/data/write
2026-02-13T12:00:24,265   copying src/boltzgen/data/write/pdb.py -> build/lib/boltzgen/data/write
2026-02-13T12:00:24,267   copying src/boltzgen/data/write/__init__.py -> build/lib/boltzgen/data/write
2026-02-13T12:00:24,269   creating build/lib/boltzgen/data/filter
2026-02-13T12:00:24,270   copying src/boltzgen/data/filter/__init__.py -> build/lib/boltzgen/data/filter
2026-02-13T12:00:24,272   creating build/lib/boltzgen/data/crop
2026-02-13T12:00:24,273   copying src/boltzgen/data/crop/multimer.py -> build/lib/boltzgen/data/crop
2026-02-13T12:00:24,276   copying src/boltzgen/data/crop/cropper.py -> build/lib/boltzgen/data/crop
2026-02-13T12:00:24,277   copying src/boltzgen/data/crop/__init__.py -> build/lib/boltzgen/data/crop
2026-02-13T12:00:24,279   creating build/lib/boltzgen/data/filter/static
2026-02-13T12:00:24,280   copying src/boltzgen/data/filter/static/filter.py -> build/lib/boltzgen/data/filter/static
2026-02-13T12:00:24,282   copying src/boltzgen/data/filter/static/polymer.py -> build/lib/boltzgen/data/filter/static
2026-02-13T12:00:24,285   copying src/boltzgen/data/filter/static/ligand.py -> build/lib/boltzgen/data/filter/static
2026-02-13T12:00:24,287   copying src/boltzgen/data/filter/static/__init__.py -> build/lib/boltzgen/data/filter/static
2026-02-13T12:00:24,290   creating build/lib/boltzgen/data/filter/dynamic
2026-02-13T12:00:24,291   copying src/boltzgen/data/filter/dynamic/error.py -> build/lib/boltzgen/data/filter/dynamic
2026-02-13T12:00:24,293   copying src/boltzgen/data/filter/dynamic/max_residues.py -> build/lib/boltzgen/data/filter/dynamic
2026-02-13T12:00:24,294   copying src/boltzgen/data/filter/dynamic/filter.py -> build/lib/boltzgen/data/filter/dynamic
2026-02-13T12:00:24,296   copying src/boltzgen/data/filter/dynamic/pdb_id_txtfile.py -> build/lib/boltzgen/data/filter/dynamic
2026-02-13T12:00:24,298   copying src/boltzgen/data/filter/dynamic/min_protein_residues.py -> build/lib/boltzgen/data/filter/dynamic
2026-02-13T12:00:24,300   copying src/boltzgen/data/filter/dynamic/size.py -> build/lib/boltzgen/data/filter/dynamic
2026-02-13T12:00:24,302   copying src/boltzgen/data/filter/dynamic/__init__.py -> build/lib/boltzgen/data/filter/dynamic
2026-02-13T12:00:24,303   copying src/boltzgen/data/filter/dynamic/resolution.py -> build/lib/boltzgen/data/filter/dynamic
2026-02-13T12:00:24,305   copying src/boltzgen/data/filter/dynamic/confidence.py -> build/lib/boltzgen/data/filter/dynamic
2026-02-13T12:00:24,307   copying src/boltzgen/data/filter/dynamic/date.py -> build/lib/boltzgen/data/filter/dynamic
2026-02-13T12:00:24,310   creating build/lib/boltzgen/model/modules
2026-02-13T12:00:24,311   copying src/boltzgen/model/modules/affinity.py -> build/lib/boltzgen/model/modules
2026-02-13T12:00:24,314   copying src/boltzgen/model/modules/inverse_fold.py -> build/lib/boltzgen/model/modules
2026-02-13T12:00:24,317   copying src/boltzgen/model/modules/diffusion_conditioning.py -> build/lib/boltzgen/model/modules
2026-02-13T12:00:24,319   copying src/boltzgen/model/modules/transformers.py -> build/lib/boltzgen/model/modules
2026-02-13T12:00:24,321   copying src/boltzgen/model/modules/trunk.py -> build/lib/boltzgen/model/modules
2026-02-13T12:00:24,324   copying src/boltzgen/model/modules/masker.py -> build/lib/boltzgen/model/modules
2026-02-13T12:00:24,326   copying src/boltzgen/model/modules/encoders.py -> build/lib/boltzgen/model/modules
2026-02-13T12:00:24,329   copying src/boltzgen/model/modules/diffusion.py -> build/lib/boltzgen/model/modules
2026-02-13T12:00:24,332   copying src/boltzgen/model/modules/utils.py -> build/lib/boltzgen/model/modules
2026-02-13T12:00:24,334   copying src/boltzgen/model/modules/__init__.py -> build/lib/boltzgen/model/modules
2026-02-13T12:00:24,336   copying src/boltzgen/model/modules/scatter_utils.py -> build/lib/boltzgen/model/modules
2026-02-13T12:00:24,338   copying src/boltzgen/model/modules/confidence.py -> build/lib/boltzgen/model/modules
2026-02-13T12:00:24,341   creating build/lib/boltzgen/model/loss
2026-02-13T12:00:24,342   copying src/boltzgen/model/loss/bfactor.py -> build/lib/boltzgen/model/loss
2026-02-13T12:00:24,344   copying src/boltzgen/model/loss/validation.py -> build/lib/boltzgen/model/loss
2026-02-13T12:00:24,347   copying src/boltzgen/model/loss/distogram.py -> build/lib/boltzgen/model/loss
2026-02-13T12:00:24,349   copying src/boltzgen/model/loss/diffusion.py -> build/lib/boltzgen/model/loss
2026-02-13T12:00:24,351   copying src/boltzgen/model/loss/res_type.py -> build/lib/boltzgen/model/loss
2026-02-13T12:00:24,353   copying src/boltzgen/model/loss/__init__.py -> build/lib/boltzgen/model/loss
2026-02-13T12:00:24,355   copying src/boltzgen/model/loss/confidence.py -> build/lib/boltzgen/model/loss
2026-02-13T12:00:24,358   creating build/lib/boltzgen/model/validation
2026-02-13T12:00:24,359   copying src/boltzgen/model/validation/rcsb.py -> build/lib/boltzgen/model/validation
2026-02-13T12:00:24,361   copying src/boltzgen/model/validation/refolding.py -> build/lib/boltzgen/model/validation
2026-02-13T12:00:24,364   copying src/boltzgen/model/validation/design.py -> build/lib/boltzgen/model/validation
2026-02-13T12:00:24,367   copying src/boltzgen/model/validation/validator.py -> build/lib/boltzgen/model/validation
2026-02-13T12:00:24,370   creating build/lib/boltzgen/model/layers
2026-02-13T12:00:24,371   copying src/boltzgen/model/layers/outer_product_mean.py -> build/lib/boltzgen/model/layers
2026-02-13T12:00:24,373   copying src/boltzgen/model/layers/pair_averaging.py -> build/lib/boltzgen/model/layers
2026-02-13T12:00:24,376   copying src/boltzgen/model/layers/initialize.py -> build/lib/boltzgen/model/layers
2026-02-13T12:00:24,378   copying src/boltzgen/model/layers/relative.py -> build/lib/boltzgen/model/layers
2026-02-13T12:00:24,380   copying src/boltzgen/model/layers/confidence_utils.py -> build/lib/boltzgen/model/layers
2026-02-13T12:00:24,383   copying src/boltzgen/model/layers/pairformer.py -> build/lib/boltzgen/model/layers
2026-02-13T12:00:24,385   copying src/boltzgen/model/layers/transition.py -> build/lib/boltzgen/model/layers
2026-02-13T12:00:24,387   copying src/boltzgen/model/layers/dropout.py -> build/lib/boltzgen/model/layers
2026-02-13T12:00:24,389   copying src/boltzgen/model/layers/__init__.py -> build/lib/boltzgen/model/layers
2026-02-13T12:00:24,391   copying src/boltzgen/model/layers/miniformer.py -> build/lib/boltzgen/model/layers
2026-02-13T12:00:24,393   copying src/boltzgen/model/layers/triangular.py -> build/lib/boltzgen/model/layers
2026-02-13T12:00:24,396   copying src/boltzgen/model/layers/attention.py -> build/lib/boltzgen/model/layers
2026-02-13T12:00:24,398   creating build/lib/boltzgen/model/optim
2026-02-13T12:00:24,399   copying src/boltzgen/model/optim/ema.py -> build/lib/boltzgen/model/optim
2026-02-13T12:00:24,402   copying src/boltzgen/model/optim/scheduler.py -> build/lib/boltzgen/model/optim
2026-02-13T12:00:24,404   copying src/boltzgen/model/optim/__init__.py -> build/lib/boltzgen/model/optim
2026-02-13T12:00:24,406   creating build/lib/boltzgen/model/models
2026-02-13T12:00:24,407   copying src/boltzgen/model/models/boltz.py -> build/lib/boltzgen/model/models
2026-02-13T12:00:24,411   copying src/boltzgen/model/models/__init__.py -> build/lib/boltzgen/model/models
2026-02-13T12:00:24,413   creating build/lib/boltzgen/model/layers/triangular_attention
2026-02-13T12:00:24,414   copying src/boltzgen/model/layers/triangular_attention/primitives.py -> build/lib/boltzgen/model/layers/triangular_attention
2026-02-13T12:00:24,416   copying src/boltzgen/model/layers/triangular_attention/utils.py -> build/lib/boltzgen/model/layers/triangular_attention
2026-02-13T12:00:24,418   copying src/boltzgen/model/layers/triangular_attention/__init__.py -> build/lib/boltzgen/model/layers/triangular_attention
2026-02-13T12:00:24,420   copying src/boltzgen/model/layers/triangular_attention/attention.py -> build/lib/boltzgen/model/layers/triangular_attention
2026-02-13T12:00:24,423   creating build/lib/boltzgen/task/train
2026-02-13T12:00:24,424   copying src/boltzgen/task/train/data.py -> build/lib/boltzgen/task/train
2026-02-13T12:00:24,427   copying src/boltzgen/task/train/train.py -> build/lib/boltzgen/task/train
2026-02-13T12:00:24,430   copying src/boltzgen/task/train/__init__.py -> build/lib/boltzgen/task/train
2026-02-13T12:00:24,432   creating build/lib/boltzgen/task/analyze
2026-02-13T12:00:24,432   copying src/boltzgen/task/analyze/analyze_utils.py -> build/lib/boltzgen/task/analyze
2026-02-13T12:00:24,436   copying src/boltzgen/task/analyze/analyze.py -> build/lib/boltzgen/task/analyze
2026-02-13T12:00:24,440   creating build/lib/boltzgen/task/predict
2026-02-13T12:00:24,441   copying src/boltzgen/task/predict/writer.py -> build/lib/boltzgen/task/predict
2026-02-13T12:00:24,444   copying src/boltzgen/task/predict/data_from_generated.py -> build/lib/boltzgen/task/predict
2026-02-13T12:00:24,447   copying src/boltzgen/task/predict/data_from_yaml.py -> build/lib/boltzgen/task/predict
2026-02-13T12:00:24,450   copying src/boltzgen/task/predict/loading_utils.py -> build/lib/boltzgen/task/predict
2026-02-13T12:00:24,451   copying src/boltzgen/task/predict/data_ligands.py -> build/lib/boltzgen/task/predict
2026-02-13T12:00:24,454   copying src/boltzgen/task/predict/__init__.py -> build/lib/boltzgen/task/predict
2026-02-13T12:00:24,455   copying src/boltzgen/task/predict/predict.py -> build/lib/boltzgen/task/predict
2026-02-13T12:00:24,458   copying src/boltzgen/task/predict/data_protein_binder.py -> build/lib/boltzgen/task/predict
2026-02-13T12:00:24,461   creating build/lib/boltzgen/task/filter
2026-02-13T12:00:24,462   copying src/boltzgen/task/filter/filter.py -> build/lib/boltzgen/task/filter
2026-02-13T12:00:24,465   copying src/boltzgen/task/filter/seqplot_utils.py -> build/lib/boltzgen/task/filter
2026-02-13T12:00:24,468   copying src/boltzgen/task/filter/__init__.py -> build/lib/boltzgen/task/filter
2026-02-13T12:00:24,469   running egg_info
2026-02-13T12:00:24,479   writing src/boltzgen.egg-info/PKG-INFO
2026-02-13T12:00:24,484   writing dependency_links to src/boltzgen.egg-info/dependency_links.txt
2026-02-13T12:00:24,485   writing entry points to src/boltzgen.egg-info/entry_points.txt
2026-02-13T12:00:24,488   writing requirements to src/boltzgen.egg-info/requires.txt
2026-02-13T12:00:24,489   writing top-level names to src/boltzgen.egg-info/top_level.txt
2026-02-13T12:00:24,526   reading manifest file 'src/boltzgen.egg-info/SOURCES.txt'
2026-02-13T12:00:24,534   adding license file 'LICENSE'
2026-02-13T12:00:24,542   writing manifest file 'src/boltzgen.egg-info/SOURCES.txt'
2026-02-13T12:00:24,560   creating build/lib/boltzgen/resources/config
2026-02-13T12:00:24,562   copying src/boltzgen/resources/config/design.yaml -> build/lib/boltzgen/resources/config
2026-02-13T12:00:24,564   copying src/boltzgen/resources/config/analysis.yaml -> build/lib/boltzgen/resources/config
2026-02-13T12:00:24,566   copying src/boltzgen/resources/config/fold.yaml -> build/lib/boltzgen/resources/config
2026-02-13T12:00:24,569   copying src/boltzgen/resources/config/inverse_fold_only.yaml -> build/lib/boltzgen/resources/config
2026-02-13T12:00:24,571   copying src/boltzgen/resources/config/filtering.yaml -> build/lib/boltzgen/resources/config
2026-02-13T12:00:24,573   copying src/boltzgen/resources/config/affinity.yaml -> build/lib/boltzgen/resources/config
2026-02-13T12:00:24,576   copying src/boltzgen/resources/config/inverse_fold.yaml -> build/lib/boltzgen/resources/config
2026-02-13T12:00:24,578   creating build/lib/boltzgen/resources/config/train
2026-02-13T12:00:24,579   copying src/boltzgen/resources/config/train/boltzgen.no_distillation.yaml -> build/lib/boltzgen/resources/config/train
2026-02-13T12:00:24,583   copying src/boltzgen/resources/config/train/inverse_folding.yaml -> build/lib/boltzgen/resources/config/train
2026-02-13T12:00:24,586   copying src/boltzgen/resources/config/train/boltzgen_small.yaml -> build/lib/boltzgen/resources/config/train
2026-02-13T12:00:24,588   copying src/boltzgen/resources/config/train/boltzgen.yaml -> build/lib/boltzgen/resources/config/train
2026-02-13T12:00:24,617   installing to build/bdist.linux-armv7l/wheel
2026-02-13T12:00:24,618   running install
2026-02-13T12:00:24,640   running install_lib
2026-02-13T12:00:24,646   creating build/bdist.linux-armv7l/wheel
2026-02-13T12:00:24,648   creating build/bdist.linux-armv7l/wheel/boltzgen
2026-02-13T12:00:24,650   creating build/bdist.linux-armv7l/wheel/boltzgen/data
2026-02-13T12:00:24,651   copying build/lib/boltzgen/data/data.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data
2026-02-13T12:00:24,655   creating build/bdist.linux-armv7l/wheel/boltzgen/data/template
2026-02-13T12:00:24,656   copying build/lib/boltzgen/data/template/features.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/template
2026-02-13T12:00:24,658   copying build/lib/boltzgen/data/template/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/template
2026-02-13T12:00:24,661   creating build/bdist.linux-armv7l/wheel/boltzgen/data/sample
2026-02-13T12:00:24,662   copying build/lib/boltzgen/data/sample/sampler.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/sample
2026-02-13T12:00:24,664   copying build/lib/boltzgen/data/sample/cluster.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/sample
2026-02-13T12:00:24,666   copying build/lib/boltzgen/data/sample/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/sample
2026-02-13T12:00:24,668   creating build/bdist.linux-armv7l/wheel/boltzgen/data/select
2026-02-13T12:00:24,669   copying build/lib/boltzgen/data/select/selector.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/select
2026-02-13T12:00:24,671   copying build/lib/boltzgen/data/select/protein.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/select
2026-02-13T12:00:24,674   copying build/lib/boltzgen/data/select/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/select
2026-02-13T12:00:24,676   creating build/bdist.linux-armv7l/wheel/boltzgen/data/tokenize
2026-02-13T12:00:24,677   copying build/lib/boltzgen/data/tokenize/tokenizer.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/tokenize
2026-02-13T12:00:24,680   copying build/lib/boltzgen/data/tokenize/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/tokenize
2026-02-13T12:00:24,681   copying build/lib/boltzgen/data/pad.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data
2026-02-13T12:00:24,683   copying build/lib/boltzgen/data/mol.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data
2026-02-13T12:00:24,686   copying build/lib/boltzgen/data/rmsd_computation.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data
2026-02-13T12:00:24,689   creating build/bdist.linux-armv7l/wheel/boltzgen/data/feature
2026-02-13T12:00:24,690   copying build/lib/boltzgen/data/feature/featurizer.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/feature
2026-02-13T12:00:24,693   copying build/lib/boltzgen/data/feature/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/feature
2026-02-13T12:00:24,695   copying build/lib/boltzgen/data/const.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data
2026-02-13T12:00:24,699   creating build/bdist.linux-armv7l/wheel/boltzgen/data/parse
2026-02-13T12:00:24,700   copying build/lib/boltzgen/data/parse/mmcif.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/parse
2026-02-13T12:00:24,703   copying build/lib/boltzgen/data/parse/pdb_parser.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/parse
2026-02-13T12:00:24,706   copying build/lib/boltzgen/data/parse/a3m.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/parse
2026-02-13T12:00:24,708   copying build/lib/boltzgen/data/parse/schema.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/parse
2026-02-13T12:00:24,711   copying build/lib/boltzgen/data/parse/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/parse
2026-02-13T12:00:24,713   creating build/bdist.linux-armv7l/wheel/boltzgen/data/write
2026-02-13T12:00:24,714   copying build/lib/boltzgen/data/write/mmcif.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/write
2026-02-13T12:00:24,717   copying build/lib/boltzgen/data/write/pdb.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/write
2026-02-13T12:00:24,719   copying build/lib/boltzgen/data/write/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/write
2026-02-13T12:00:24,721   copying build/lib/boltzgen/data/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data
2026-02-13T12:00:24,723   creating build/bdist.linux-armv7l/wheel/boltzgen/data/filter
2026-02-13T12:00:24,724   creating build/bdist.linux-armv7l/wheel/boltzgen/data/filter/static
2026-02-13T12:00:24,726   copying build/lib/boltzgen/data/filter/static/filter.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter/static
2026-02-13T12:00:24,728   copying build/lib/boltzgen/data/filter/static/polymer.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter/static
2026-02-13T12:00:24,730   copying build/lib/boltzgen/data/filter/static/ligand.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter/static
2026-02-13T12:00:24,732   copying build/lib/boltzgen/data/filter/static/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter/static
2026-02-13T12:00:24,734   creating build/bdist.linux-armv7l/wheel/boltzgen/data/filter/dynamic
2026-02-13T12:00:24,735   copying build/lib/boltzgen/data/filter/dynamic/error.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter/dynamic
2026-02-13T12:00:24,737   copying build/lib/boltzgen/data/filter/dynamic/max_residues.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter/dynamic
2026-02-13T12:00:24,739   copying build/lib/boltzgen/data/filter/dynamic/filter.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter/dynamic
2026-02-13T12:00:24,741   copying build/lib/boltzgen/data/filter/dynamic/pdb_id_txtfile.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter/dynamic
2026-02-13T12:00:24,743   copying build/lib/boltzgen/data/filter/dynamic/min_protein_residues.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter/dynamic
2026-02-13T12:00:24,745   copying build/lib/boltzgen/data/filter/dynamic/size.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter/dynamic
2026-02-13T12:00:24,747   copying build/lib/boltzgen/data/filter/dynamic/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter/dynamic
2026-02-13T12:00:24,748   copying build/lib/boltzgen/data/filter/dynamic/resolution.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter/dynamic
2026-02-13T12:00:24,750   copying build/lib/boltzgen/data/filter/dynamic/confidence.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter/dynamic
2026-02-13T12:00:24,752   copying build/lib/boltzgen/data/filter/dynamic/date.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter/dynamic
2026-02-13T12:00:24,754   copying build/lib/boltzgen/data/filter/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/filter
2026-02-13T12:00:24,756   creating build/bdist.linux-armv7l/wheel/boltzgen/data/crop
2026-02-13T12:00:24,757   copying build/lib/boltzgen/data/crop/multimer.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/crop
2026-02-13T12:00:24,760   copying build/lib/boltzgen/data/crop/cropper.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/crop
2026-02-13T12:00:24,762   copying build/lib/boltzgen/data/crop/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/data/crop
2026-02-13T12:00:24,764   creating build/bdist.linux-armv7l/wheel/boltzgen/model
2026-02-13T12:00:24,766   creating build/bdist.linux-armv7l/wheel/boltzgen/model/modules
2026-02-13T12:00:24,767   copying build/lib/boltzgen/model/modules/affinity.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/modules
2026-02-13T12:00:24,769   copying build/lib/boltzgen/model/modules/inverse_fold.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/modules
2026-02-13T12:00:24,772   copying build/lib/boltzgen/model/modules/diffusion_conditioning.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/modules
2026-02-13T12:00:24,774   copying build/lib/boltzgen/model/modules/transformers.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/modules
2026-02-13T12:00:24,776   copying build/lib/boltzgen/model/modules/trunk.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/modules
2026-02-13T12:00:24,778   copying build/lib/boltzgen/model/modules/masker.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/modules
2026-02-13T12:00:24,780   copying build/lib/boltzgen/model/modules/encoders.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/modules
2026-02-13T12:00:24,783   copying build/lib/boltzgen/model/modules/diffusion.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/modules
2026-02-13T12:00:24,785   copying build/lib/boltzgen/model/modules/utils.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/modules
2026-02-13T12:00:24,788   copying build/lib/boltzgen/model/modules/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/modules
2026-02-13T12:00:24,789   copying build/lib/boltzgen/model/modules/scatter_utils.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/modules
2026-02-13T12:00:24,791   copying build/lib/boltzgen/model/modules/confidence.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/modules
2026-02-13T12:00:24,794   creating build/bdist.linux-armv7l/wheel/boltzgen/model/loss
2026-02-13T12:00:24,795   copying build/lib/boltzgen/model/loss/bfactor.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/loss
2026-02-13T12:00:24,797   copying build/lib/boltzgen/model/loss/validation.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/loss
2026-02-13T12:00:24,800   copying build/lib/boltzgen/model/loss/distogram.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/loss
2026-02-13T12:00:24,803   copying build/lib/boltzgen/model/loss/diffusion.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/loss
2026-02-13T12:00:24,805   copying build/lib/boltzgen/model/loss/res_type.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/loss
2026-02-13T12:00:24,807   copying build/lib/boltzgen/model/loss/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/loss
2026-02-13T12:00:24,809   copying build/lib/boltzgen/model/loss/confidence.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/loss
2026-02-13T12:00:24,812   creating build/bdist.linux-armv7l/wheel/boltzgen/model/validation
2026-02-13T12:00:24,813   copying build/lib/boltzgen/model/validation/rcsb.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/validation
2026-02-13T12:00:24,815   copying build/lib/boltzgen/model/validation/refolding.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/validation
2026-02-13T12:00:24,818   copying build/lib/boltzgen/model/validation/design.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/validation
2026-02-13T12:00:24,820   copying build/lib/boltzgen/model/validation/validator.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/validation
2026-02-13T12:00:24,823   creating build/bdist.linux-armv7l/wheel/boltzgen/model/layers
2026-02-13T12:00:24,824   copying build/lib/boltzgen/model/layers/outer_product_mean.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers
2026-02-13T12:00:24,826   copying build/lib/boltzgen/model/layers/pair_averaging.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers
2026-02-13T12:00:24,828   copying build/lib/boltzgen/model/layers/initialize.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers
2026-02-13T12:00:24,830   copying build/lib/boltzgen/model/layers/relative.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers
2026-02-13T12:00:24,833   creating build/bdist.linux-armv7l/wheel/boltzgen/model/layers/triangular_attention
2026-02-13T12:00:24,834   copying build/lib/boltzgen/model/layers/triangular_attention/primitives.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers/triangular_attention
2026-02-13T12:00:24,836   copying build/lib/boltzgen/model/layers/triangular_attention/utils.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers/triangular_attention
2026-02-13T12:00:24,838   copying build/lib/boltzgen/model/layers/triangular_attention/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers/triangular_attention
2026-02-13T12:00:24,840   copying build/lib/boltzgen/model/layers/triangular_attention/attention.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers/triangular_attention
2026-02-13T12:00:24,842   copying build/lib/boltzgen/model/layers/confidence_utils.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers
2026-02-13T12:00:24,845   copying build/lib/boltzgen/model/layers/pairformer.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers
2026-02-13T12:00:24,847   copying build/lib/boltzgen/model/layers/transition.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers
2026-02-13T12:00:24,849   copying build/lib/boltzgen/model/layers/dropout.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers
2026-02-13T12:00:24,851   copying build/lib/boltzgen/model/layers/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers
2026-02-13T12:00:24,852   copying build/lib/boltzgen/model/layers/miniformer.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers
2026-02-13T12:00:24,854   copying build/lib/boltzgen/model/layers/triangular.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers
2026-02-13T12:00:24,857   copying build/lib/boltzgen/model/layers/attention.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/layers
2026-02-13T12:00:24,859   creating build/bdist.linux-armv7l/wheel/boltzgen/model/optim
2026-02-13T12:00:24,860   copying build/lib/boltzgen/model/optim/ema.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/optim
2026-02-13T12:00:24,863   copying build/lib/boltzgen/model/optim/scheduler.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/optim
2026-02-13T12:00:24,864   copying build/lib/boltzgen/model/optim/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/optim
2026-02-13T12:00:24,866   creating build/bdist.linux-armv7l/wheel/boltzgen/model/models
2026-02-13T12:00:24,867   copying build/lib/boltzgen/model/models/boltz.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/models
2026-02-13T12:00:24,872   copying build/lib/boltzgen/model/models/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model/models
2026-02-13T12:00:24,873   copying build/lib/boltzgen/model/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/model
2026-02-13T12:00:24,875   creating build/bdist.linux-armv7l/wheel/boltzgen/cli
2026-02-13T12:00:24,876   copying build/lib/boltzgen/cli/boltzgen.py -> build/bdist.linux-armv7l/wheel/./boltzgen/cli
2026-02-13T12:00:24,880   copying build/lib/boltzgen/cli/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/cli
2026-02-13T12:00:24,882   creating build/bdist.linux-armv7l/wheel/boltzgen/resources
2026-02-13T12:00:24,883   copying build/lib/boltzgen/resources/main.py -> build/bdist.linux-armv7l/wheel/./boltzgen/resources
2026-02-13T12:00:24,885   creating build/bdist.linux-armv7l/wheel/boltzgen/resources/config
2026-02-13T12:00:24,887   creating build/bdist.linux-armv7l/wheel/boltzgen/resources/config/train
2026-02-13T12:00:24,888   copying build/lib/boltzgen/resources/config/train/boltzgen.no_distillation.yaml -> build/bdist.linux-armv7l/wheel/./boltzgen/resources/config/train
2026-02-13T12:00:24,891   copying build/lib/boltzgen/resources/config/train/inverse_folding.yaml -> build/bdist.linux-armv7l/wheel/./boltzgen/resources/config/train
2026-02-13T12:00:24,894   copying build/lib/boltzgen/resources/config/train/boltzgen_small.yaml -> build/bdist.linux-armv7l/wheel/./boltzgen/resources/config/train
2026-02-13T12:00:24,896   copying build/lib/boltzgen/resources/config/train/boltzgen.yaml -> build/bdist.linux-armv7l/wheel/./boltzgen/resources/config/train
2026-02-13T12:00:24,899   copying build/lib/boltzgen/resources/config/design.yaml -> build/bdist.linux-armv7l/wheel/./boltzgen/resources/config
2026-02-13T12:00:24,901   copying build/lib/boltzgen/resources/config/analysis.yaml -> build/bdist.linux-armv7l/wheel/./boltzgen/resources/config
2026-02-13T12:00:24,903   copying build/lib/boltzgen/resources/config/fold.yaml -> build/bdist.linux-armv7l/wheel/./boltzgen/resources/config
2026-02-13T12:00:24,905   copying build/lib/boltzgen/resources/config/inverse_fold_only.yaml -> build/bdist.linux-armv7l/wheel/./boltzgen/resources/config
2026-02-13T12:00:24,907   copying build/lib/boltzgen/resources/config/filtering.yaml -> build/bdist.linux-armv7l/wheel/./boltzgen/resources/config
2026-02-13T12:00:24,909   copying build/lib/boltzgen/resources/config/affinity.yaml -> build/bdist.linux-armv7l/wheel/./boltzgen/resources/config
2026-02-13T12:00:24,910   copying build/lib/boltzgen/resources/config/inverse_fold.yaml -> build/bdist.linux-armv7l/wheel/./boltzgen/resources/config
2026-02-13T12:00:24,912   copying build/lib/boltzgen/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen
2026-02-13T12:00:24,914   creating build/bdist.linux-armv7l/wheel/boltzgen/utils
2026-02-13T12:00:24,916   copying build/lib/boltzgen/utils/quiet.py -> build/bdist.linux-armv7l/wheel/./boltzgen/utils
2026-02-13T12:00:24,918   copying build/lib/boltzgen/utils/pipeline_progress_bar.py -> build/bdist.linux-armv7l/wheel/./boltzgen/utils
2026-02-13T12:00:24,920   copying build/lib/boltzgen/utils/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/utils
2026-02-13T12:00:24,922   creating build/bdist.linux-armv7l/wheel/boltzgen/task
2026-02-13T12:00:24,924   creating build/bdist.linux-armv7l/wheel/boltzgen/task/train
2026-02-13T12:00:24,925   copying build/lib/boltzgen/task/train/data.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/train
2026-02-13T12:00:24,928   copying build/lib/boltzgen/task/train/train.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/train
2026-02-13T12:00:24,931   copying build/lib/boltzgen/task/train/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/train
2026-02-13T12:00:24,932   copying build/lib/boltzgen/task/task.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task
2026-02-13T12:00:24,935   creating build/bdist.linux-armv7l/wheel/boltzgen/task/analyze
2026-02-13T12:00:24,936   copying build/lib/boltzgen/task/analyze/analyze_utils.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/analyze
2026-02-13T12:00:24,939   copying build/lib/boltzgen/task/analyze/analyze.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/analyze
2026-02-13T12:00:24,943   copying build/lib/boltzgen/task/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task
2026-02-13T12:00:24,945   creating build/bdist.linux-armv7l/wheel/boltzgen/task/predict
2026-02-13T12:00:24,946   copying build/lib/boltzgen/task/predict/writer.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/predict
2026-02-13T12:00:24,949   copying build/lib/boltzgen/task/predict/data_from_generated.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/predict
2026-02-13T12:00:24,951   copying build/lib/boltzgen/task/predict/data_from_yaml.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/predict
2026-02-13T12:00:24,954   copying build/lib/boltzgen/task/predict/loading_utils.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/predict
2026-02-13T12:00:24,957   copying build/lib/boltzgen/task/predict/data_ligands.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/predict
2026-02-13T12:00:24,959   copying build/lib/boltzgen/task/predict/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/predict
2026-02-13T12:00:24,960   copying build/lib/boltzgen/task/predict/predict.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/predict
2026-02-13T12:00:24,963   copying build/lib/boltzgen/task/predict/data_protein_binder.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/predict
2026-02-13T12:00:24,966   creating build/bdist.linux-armv7l/wheel/boltzgen/task/filter
2026-02-13T12:00:24,967   copying build/lib/boltzgen/task/filter/filter.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/filter
2026-02-13T12:00:24,970   copying build/lib/boltzgen/task/filter/seqplot_utils.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/filter
2026-02-13T12:00:24,972   copying build/lib/boltzgen/task/filter/__init__.py -> build/bdist.linux-armv7l/wheel/./boltzgen/task/filter
2026-02-13T12:00:24,974   running install_egg_info
2026-02-13T12:00:24,978   Copying src/boltzgen.egg-info to build/bdist.linux-armv7l/wheel/./boltzgen-0.3.0-py3.11.egg-info
2026-02-13T12:00:24,989   running install_scripts
2026-02-13T12:00:25,001   creating build/bdist.linux-armv7l/wheel/boltzgen-0.3.0.dist-info/WHEEL
2026-02-13T12:00:25,003   creating '/tmp/pip-wheel-j3y634ab/.tmp-lm4t_9kh/boltzgen-0.3.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2026-02-13T12:00:25,006   adding 'boltzgen/__init__.py'
2026-02-13T12:00:25,007   adding 'boltzgen/cli/__init__.py'
2026-02-13T12:00:25,015   adding 'boltzgen/cli/boltzgen.py'
2026-02-13T12:00:25,018   adding 'boltzgen/data/__init__.py'
2026-02-13T12:00:25,026   adding 'boltzgen/data/const.py'
2026-02-13T12:00:25,034   adding 'boltzgen/data/data.py'
2026-02-13T12:00:25,039   adding 'boltzgen/data/mol.py'
2026-02-13T12:00:25,041   adding 'boltzgen/data/pad.py'
2026-02-13T12:00:25,042   adding 'boltzgen/data/rmsd_computation.py'
2026-02-13T12:00:25,044   adding 'boltzgen/data/crop/__init__.py'
2026-02-13T12:00:25,045   adding 'boltzgen/data/crop/cropper.py'
2026-02-13T12:00:25,047   adding 'boltzgen/data/crop/multimer.py'
2026-02-13T12:00:25,049   adding 'boltzgen/data/feature/__init__.py'
2026-02-13T12:00:25,058   adding 'boltzgen/data/feature/featurizer.py'
2026-02-13T12:00:25,060   adding 'boltzgen/data/filter/__init__.py'
2026-02-13T12:00:25,062   adding 'boltzgen/data/filter/dynamic/__init__.py'
2026-02-13T12:00:25,063   adding 'boltzgen/data/filter/dynamic/confidence.py'
2026-02-13T12:00:25,064   adding 'boltzgen/data/filter/dynamic/date.py'
2026-02-13T12:00:25,066   adding 'boltzgen/data/filter/dynamic/error.py'
2026-02-13T12:00:25,067   adding 'boltzgen/data/filter/dynamic/filter.py'
2026-02-13T12:00:25,068   adding 'boltzgen/data/filter/dynamic/max_residues.py'
2026-02-13T12:00:25,069   adding 'boltzgen/data/filter/dynamic/min_protein_residues.py'
2026-02-13T12:00:25,071   adding 'boltzgen/data/filter/dynamic/pdb_id_txtfile.py'
2026-02-13T12:00:25,072   adding 'boltzgen/data/filter/dynamic/resolution.py'
2026-02-13T12:00:25,073   adding 'boltzgen/data/filter/dynamic/size.py'
2026-02-13T12:00:25,075   adding 'boltzgen/data/filter/static/__init__.py'
2026-02-13T12:00:25,076   adding 'boltzgen/data/filter/static/filter.py'
2026-02-13T12:00:25,077   adding 'boltzgen/data/filter/static/ligand.py'
2026-02-13T12:00:25,079   adding 'boltzgen/data/filter/static/polymer.py'
2026-02-13T12:00:25,081   adding 'boltzgen/data/parse/__init__.py'
2026-02-13T12:00:25,082   adding 'boltzgen/data/parse/a3m.py'
2026-02-13T12:00:25,088   adding 'boltzgen/data/parse/mmcif.py'
2026-02-13T12:00:25,089   adding 'boltzgen/data/parse/pdb_parser.py'
2026-02-13T12:00:25,098   adding 'boltzgen/data/parse/schema.py'
2026-02-13T12:00:25,100   adding 'boltzgen/data/sample/__init__.py'
2026-02-13T12:00:25,102   adding 'boltzgen/data/sample/cluster.py'
2026-02-13T12:00:25,103   adding 'boltzgen/data/sample/sampler.py'
2026-02-13T12:00:25,104   adding 'boltzgen/data/select/__init__.py'
2026-02-13T12:00:25,108   adding 'boltzgen/data/select/protein.py'
2026-02-13T12:00:25,109   adding 'boltzgen/data/select/selector.py'
2026-02-13T12:00:25,111   adding 'boltzgen/data/template/__init__.py'
2026-02-13T12:00:25,112   adding 'boltzgen/data/template/features.py'
2026-02-13T12:00:25,114   adding 'boltzgen/data/tokenize/__init__.py'
2026-02-13T12:00:25,116   adding 'boltzgen/data/tokenize/tokenizer.py'
2026-02-13T12:00:25,118   adding 'boltzgen/data/write/__init__.py'
2026-02-13T12:00:25,120   adding 'boltzgen/data/write/mmcif.py'
2026-02-13T12:00:25,121   adding 'boltzgen/data/write/pdb.py'
2026-02-13T12:00:25,123   adding 'boltzgen/model/__init__.py'
2026-02-13T12:00:25,125   adding 'boltzgen/model/layers/__init__.py'
2026-02-13T12:00:25,126   adding 'boltzgen/model/layers/attention.py'
2026-02-13T12:00:25,128   adding 'boltzgen/model/layers/confidence_utils.py'
2026-02-13T12:00:25,129   adding 'boltzgen/model/layers/dropout.py'
2026-02-13T12:00:25,130   adding 'boltzgen/model/layers/initialize.py'
2026-02-13T12:00:25,132   adding 'boltzgen/model/layers/miniformer.py'
2026-02-13T12:00:25,133   adding 'boltzgen/model/layers/outer_product_mean.py'
2026-02-13T12:00:25,134   adding 'boltzgen/model/layers/pair_averaging.py'
2026-02-13T12:00:25,136   adding 'boltzgen/model/layers/pairformer.py'
2026-02-13T12:00:25,137   adding 'boltzgen/model/layers/relative.py'
2026-02-13T12:00:25,139   adding 'boltzgen/model/layers/transition.py'
2026-02-13T12:00:25,140   adding 'boltzgen/model/layers/triangular.py'
2026-02-13T12:00:25,142   adding 'boltzgen/model/layers/triangular_attention/__init__.py'
2026-02-13T12:00:25,143   adding 'boltzgen/model/layers/triangular_attention/attention.py'
2026-02-13T12:00:25,145   adding 'boltzgen/model/layers/triangular_attention/primitives.py'
2026-02-13T12:00:25,147   adding 'boltzgen/model/layers/triangular_attention/utils.py'
2026-02-13T12:00:25,149   adding 'boltzgen/model/loss/__init__.py'
2026-02-13T12:00:25,150   adding 'boltzgen/model/loss/bfactor.py'
2026-02-13T12:00:25,152   adding 'boltzgen/model/loss/confidence.py'
2026-02-13T12:00:25,154   adding 'boltzgen/model/loss/diffusion.py'
2026-02-13T12:00:25,155   adding 'boltzgen/model/loss/distogram.py'
2026-02-13T12:00:25,157   adding 'boltzgen/model/loss/res_type.py'
2026-02-13T12:00:25,162   adding 'boltzgen/model/loss/validation.py'
2026-02-13T12:00:25,163   adding 'boltzgen/model/models/__init__.py'
2026-02-13T12:00:25,169   adding 'boltzgen/model/models/boltz.py'
2026-02-13T12:00:25,171   adding 'boltzgen/model/modules/__init__.py'
2026-02-13T12:00:25,173   adding 'boltzgen/model/modules/affinity.py'
2026-02-13T12:00:25,175   adding 'boltzgen/model/modules/confidence.py'
2026-02-13T12:00:25,179   adding 'boltzgen/model/modules/diffusion.py'
2026-02-13T12:00:25,180   adding 'boltzgen/model/modules/diffusion_conditioning.py'
2026-02-13T12:00:25,183   adding 'boltzgen/model/modules/encoders.py'
2026-02-13T12:00:25,186   adding 'boltzgen/model/modules/inverse_fold.py'
2026-02-13T12:00:25,188   adding 'boltzgen/model/modules/masker.py'
2026-02-13T12:00:25,189   adding 'boltzgen/model/modules/scatter_utils.py'
2026-02-13T12:00:25,191   adding 'boltzgen/model/modules/transformers.py'
2026-02-13T12:00:25,194   adding 'boltzgen/model/modules/trunk.py'
2026-02-13T12:00:25,196   adding 'boltzgen/model/modules/utils.py'
2026-02-13T12:00:25,197   adding 'boltzgen/model/optim/__init__.py'
2026-02-13T12:00:25,199   adding 'boltzgen/model/optim/ema.py'
2026-02-13T12:00:25,200   adding 'boltzgen/model/optim/scheduler.py'
2026-02-13T12:00:25,203   adding 'boltzgen/model/validation/design.py'
2026-02-13T12:00:25,204   adding 'boltzgen/model/validation/rcsb.py'
2026-02-13T12:00:25,206   adding 'boltzgen/model/validation/refolding.py'
2026-02-13T12:00:25,209   adding 'boltzgen/model/validation/validator.py'
2026-02-13T12:00:25,211   adding 'boltzgen/resources/main.py'
2026-02-13T12:00:25,213   adding 'boltzgen/resources/config/affinity.yaml'
2026-02-13T12:00:25,214   adding 'boltzgen/resources/config/analysis.yaml'
2026-02-13T12:00:25,215   adding 'boltzgen/resources/config/design.yaml'
2026-02-13T12:00:25,217   adding 'boltzgen/resources/config/filtering.yaml'
2026-02-13T12:00:25,218   adding 'boltzgen/resources/config/fold.yaml'
2026-02-13T12:00:25,219   adding 'boltzgen/resources/config/inverse_fold.yaml'
2026-02-13T12:00:25,221   adding 'boltzgen/resources/config/inverse_fold_only.yaml'
2026-02-13T12:00:25,223   adding 'boltzgen/resources/config/train/boltzgen.no_distillation.yaml'
2026-02-13T12:00:25,226   adding 'boltzgen/resources/config/train/boltzgen.yaml'
2026-02-13T12:00:25,227   adding 'boltzgen/resources/config/train/boltzgen_small.yaml'
2026-02-13T12:00:25,229   adding 'boltzgen/resources/config/train/inverse_folding.yaml'
2026-02-13T12:00:25,231   adding 'boltzgen/task/__init__.py'
2026-02-13T12:00:25,232   adding 'boltzgen/task/task.py'
2026-02-13T12:00:25,238   adding 'boltzgen/task/analyze/analyze.py'
2026-02-13T12:00:25,244   adding 'boltzgen/task/analyze/analyze_utils.py'
2026-02-13T12:00:25,245   adding 'boltzgen/task/filter/__init__.py'
2026-02-13T12:00:25,251   adding 'boltzgen/task/filter/filter.py'
2026-02-13T12:00:25,254   adding 'boltzgen/task/filter/seqplot_utils.py'
2026-02-13T12:00:25,256   adding 'boltzgen/task/predict/__init__.py'
2026-02-13T12:00:25,259   adding 'boltzgen/task/predict/data_from_generated.py'
2026-02-13T12:00:25,261   adding 'boltzgen/task/predict/data_from_yaml.py'
2026-02-13T12:00:25,263   adding 'boltzgen/task/predict/data_ligands.py'
2026-02-13T12:00:25,266   adding 'boltzgen/task/predict/data_protein_binder.py'
2026-02-13T12:00:25,267   adding 'boltzgen/task/predict/loading_utils.py'
2026-02-13T12:00:25,269   adding 'boltzgen/task/predict/predict.py'
2026-02-13T12:00:25,271   adding 'boltzgen/task/predict/writer.py'
2026-02-13T12:00:25,273   adding 'boltzgen/task/train/__init__.py'
2026-02-13T12:00:25,277   adding 'boltzgen/task/train/data.py'
2026-02-13T12:00:25,279   adding 'boltzgen/task/train/train.py'
2026-02-13T12:00:25,281   adding 'boltzgen/utils/__init__.py'
2026-02-13T12:00:25,282   adding 'boltzgen/utils/pipeline_progress_bar.py'
2026-02-13T12:00:25,283   adding 'boltzgen/utils/quiet.py'
2026-02-13T12:00:25,286   adding 'boltzgen-0.3.0.dist-info/licenses/LICENSE'
2026-02-13T12:00:25,287   adding 'boltzgen-0.3.0.dist-info/METADATA'
2026-02-13T12:00:25,288   adding 'boltzgen-0.3.0.dist-info/WHEEL'
2026-02-13T12:00:25,289   adding 'boltzgen-0.3.0.dist-info/entry_points.txt'
2026-02-13T12:00:25,290   adding 'boltzgen-0.3.0.dist-info/top_level.txt'
2026-02-13T12:00:25,292   adding 'boltzgen-0.3.0.dist-info/RECORD'
2026-02-13T12:00:25,300   removing build/bdist.linux-armv7l/wheel
2026-02-13T12:00:25,438   Building wheel for boltzgen (pyproject.toml): finished with status 'done'
2026-02-13T12:00:25,449   Created wheel for boltzgen: filename=boltzgen-0.3.0-py3-none-any.whl size=352061 sha256=534635788d0fab30b27401daed7714b78848a2bd57cdc4067d54776d734f15f7
2026-02-13T12:00:25,451   Stored in directory: /tmp/pip-ephem-wheel-cache-1rz8_v5s/wheels/e1/d1/6e/1c1277155efbb0bf063b9eaf6e892512567cd26784361b1d5f
2026-02-13T12:00:25,466 Successfully built boltzgen
2026-02-13T12:00:25,477 Removed build tracker: '/tmp/pip-build-tracker-4dxusgdv'