2026-02-16T22:07:04,756 Created temporary directory: /tmp/pip-ephem-wheel-cache-65l2ups3
2026-02-16T22:07:04,758 Created temporary directory: /tmp/pip-build-tracker-mwo866be
2026-02-16T22:07:04,758 Initialized build tracking at /tmp/pip-build-tracker-mwo866be
2026-02-16T22:07:04,759 Created build tracker: /tmp/pip-build-tracker-mwo866be
2026-02-16T22:07:04,759 Entered build tracker: /tmp/pip-build-tracker-mwo866be
2026-02-16T22:07:04,760 Created temporary directory: /tmp/pip-wheel-6poa9ure
2026-02-16T22:07:04,763 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-02-16T22:07:04,765 Created temporary directory: /tmp/pip-ephem-wheel-cache-7hv7_fj1
2026-02-16T22:07:04,788 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-02-16T22:07:04,792 2 location(s) to search for versions of tome-mcp:
2026-02-16T22:07:04,792 * https://pypi.org/simple/tome-mcp/
2026-02-16T22:07:04,792 * https://www.piwheels.org/simple/tome-mcp/
2026-02-16T22:07:04,793 Fetching project page and analyzing links: https://pypi.org/simple/tome-mcp/
2026-02-16T22:07:04,793 Getting page https://pypi.org/simple/tome-mcp/
2026-02-16T22:07:04,795 Found index url https://pypi.org/simple
2026-02-16T22:07:05,017 Fetched page https://pypi.org/simple/tome-mcp/ as application/vnd.pypi.simple.v1+json
2026-02-16T22:07:05,020   Skipping link: No binaries permitted for tome-mcp: https://files.pythonhosted.org/packages/79/5d/482c97c6272d3c09a8ea99bbfeb6bff17511870afef6ef99b96a5c88819e/tome_mcp-0.1.0-py3-none-any.whl (from https://pypi.org/simple/tome-mcp/) (requires-python:>=3.11)
2026-02-16T22:07:05,021   Found link https://files.pythonhosted.org/packages/9a/53/997d7fb56a1a56dab9b8ce9e196abeec8ffa5798b0d5c13555a75aec1195/tome_mcp-0.1.0.tar.gz (from https://pypi.org/simple/tome-mcp/) (requires-python:>=3.11), version: 0.1.0
2026-02-16T22:07:05,021   Skipping link: No binaries permitted for tome-mcp: https://files.pythonhosted.org/packages/54/cc/edf9ca47f196ac8bfe1a8ee8251ea1c7f6f5344d2fa13adee406ccd8d61e/tome_mcp-0.2.0-py3-none-any.whl (from https://pypi.org/simple/tome-mcp/) (requires-python:>=3.11)
2026-02-16T22:07:05,022   Found link https://files.pythonhosted.org/packages/3e/47/8fe3a73f3553f8889acf830d6fa83fc23d916a538a8a489d3a3bd86e8b8f/tome_mcp-0.2.0.tar.gz (from https://pypi.org/simple/tome-mcp/) (requires-python:>=3.11), version: 0.2.0
2026-02-16T22:07:05,023   Skipping link: No binaries permitted for tome-mcp: https://files.pythonhosted.org/packages/73/e2/20f5aa183b30c5f8ac14d343296450418ae71c438fe6da8dad8b6112c92d/tome_mcp-0.4.0-py3-none-any.whl (from https://pypi.org/simple/tome-mcp/) (requires-python:>=3.11)
2026-02-16T22:07:05,024   Found link https://files.pythonhosted.org/packages/09/68/dadbfe7d99875908922cfba2edd90e7e63e1fbd2c43369ee2ff9c758d5a7/tome_mcp-0.4.0.tar.gz (from https://pypi.org/simple/tome-mcp/) (requires-python:>=3.11), version: 0.4.0
2026-02-16T22:07:05,025   Skipping link: No binaries permitted for tome-mcp: https://files.pythonhosted.org/packages/ec/b2/72f2db2c5df35e0e3f69f07b50ba6f6e7674f2bca254b88092eaaf5d4f4f/tome_mcp-0.5.0-py3-none-any.whl (from https://pypi.org/simple/tome-mcp/) (requires-python:>=3.11)
2026-02-16T22:07:05,026   Found link https://files.pythonhosted.org/packages/cf/6a/8ed1a9561b4f4131e81c87675d1d64ffc6af50c44985056ae200c487bdb3/tome_mcp-0.5.0.tar.gz (from https://pypi.org/simple/tome-mcp/) (requires-python:>=3.11), version: 0.5.0
2026-02-16T22:07:05,026 Fetching project page and analyzing links: https://www.piwheels.org/simple/tome-mcp/
2026-02-16T22:07:05,027 Getting page https://www.piwheels.org/simple/tome-mcp/
2026-02-16T22:07:05,028 Found index url https://www.piwheels.org/simple
2026-02-16T22:07:05,185 Fetched page https://www.piwheels.org/simple/tome-mcp/ as text/html
2026-02-16T22:07:05,187   Skipping link: No binaries permitted for tome-mcp: https://www.piwheels.org/simple/tome-mcp/tome_mcp-0.2.0-py3-none-any.whl#sha256=d3f9c16b6bde4d18bddab829596f8388a99d14fb0954d50a37f3668276c5d8ab (from https://www.piwheels.org/simple/tome-mcp/) (requires-python:>=3.11)
2026-02-16T22:07:05,188   Skipping link: No binaries permitted for tome-mcp: https://www.piwheels.org/simple/tome-mcp/tome_mcp-0.1.0-py3-none-any.whl#sha256=1be9998e6345aa3f526ae3e1edc9ecf25ce237b14a2e89f8e490704feaa3dfe1 (from https://www.piwheels.org/simple/tome-mcp/) (requires-python:>=3.11)
2026-02-16T22:07:05,189 Skipping link: not a file: https://www.piwheels.org/simple/tome-mcp/
2026-02-16T22:07:05,189 Skipping link: not a file: https://pypi.org/simple/tome-mcp/
2026-02-16T22:07:05,210 Given no hashes to check 1 links for project 'tome-mcp': discarding no candidates
2026-02-16T22:07:05,229 Collecting tome-mcp==0.4.0
2026-02-16T22:07:05,231   Created temporary directory: /tmp/pip-unpack-22df6yld
2026-02-16T22:07:05,450   Downloading tome_mcp-0.4.0.tar.gz (266 kB)
2026-02-16T22:07:05,798   Added tome-mcp==0.4.0 from https://files.pythonhosted.org/packages/09/68/dadbfe7d99875908922cfba2edd90e7e63e1fbd2c43369ee2ff9c758d5a7/tome_mcp-0.4.0.tar.gz to build tracker '/tmp/pip-build-tracker-mwo866be'
2026-02-16T22:07:05,806   Created temporary directory: /tmp/pip-build-env-g_8a493o
2026-02-16T22:07:05,810   Installing build dependencies: started
2026-02-16T22:07:05,812   Running command pip subprocess to install build dependencies
2026-02-16T22:07:06,959   Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11)
2026-02-16T22:07:07,554   DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-02-16T22:07:07,578   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-02-16T22:07:09,306   Collecting setuptools>=68.0
2026-02-16T22:07:09,382     Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.0-py3-none-any.whl (1.0 MB)
2026-02-16T22:07:09,754   Collecting setuptools-scm>=8.0
2026-02-16T22:07:09,769     Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-9.2.2-py3-none-any.whl (62 kB)
2026-02-16T22:07:09,962   Collecting packaging>=20
2026-02-16T22:07:09,978     Using cached https://www.piwheels.org/simple/packaging/packaging-26.0-py3-none-any.whl (74 kB)
2026-02-16T22:07:13,010   Installing collected packages: setuptools, packaging, setuptools-scm
2026-02-16T22:07:16,684     Creating /tmp/pip-build-env-g_8a493o/overlay/local/bin
2026-02-16T22:07:16,687     changing mode of /tmp/pip-build-env-g_8a493o/overlay/local/bin/setuptools-scm to 755
2026-02-16T22:07:16,710   Successfully installed packaging-26.0 setuptools-82.0.0 setuptools-scm-9.2.2
2026-02-16T22:07:16,993   Installing build dependencies: finished with status 'done'
2026-02-16T22:07:16,999   Getting requirements to build wheel: started
2026-02-16T22:07:17,001   Running command Getting requirements to build wheel
2026-02-16T22:07:17,645   toml section missing PosixPath('pyproject.toml') does not contain a tool.setuptools_scm section
2026-02-16T22:07:17,684   /tmp/pip-build-env-g_8a493o/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated
2026-02-16T22:07:17,684   !!

2026-02-16T22:07:17,686           ********************************************************************************
2026-02-16T22:07:17,686           Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0).

2026-02-16T22:07:17,688           By 2027-Feb-18, you need to update your project and remove deprecated calls
2026-02-16T22:07:17,688           or your builds will no longer be supported.

2026-02-16T22:07:17,689           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-02-16T22:07:17,690           ********************************************************************************

2026-02-16T22:07:17,690   !!
2026-02-16T22:07:17,691     corresp(dist, value, root_dir)
2026-02-16T22:07:17,766   /tmp/pip-build-env-g_8a493o/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-02-16T22:07:17,766   !!

2026-02-16T22:07:17,767           ********************************************************************************
2026-02-16T22:07:17,768           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-02-16T22:07:17,769           License :: OSI Approved :: GNU Affero General Public License v3 or later (AGPLv3+)

2026-02-16T22:07:17,770           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-02-16T22:07:17,770           ********************************************************************************

2026-02-16T22:07:17,771   !!
2026-02-16T22:07:17,771     dist._finalize_license_expression()
2026-02-16T22:07:17,772   /tmp/pip-build-env-g_8a493o/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-02-16T22:07:17,772   !!

2026-02-16T22:07:17,773           ********************************************************************************
2026-02-16T22:07:17,774           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-02-16T22:07:17,775           License :: OSI Approved :: GNU Affero General Public License v3 or later (AGPLv3+)

2026-02-16T22:07:17,776           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-02-16T22:07:17,777           ********************************************************************************

2026-02-16T22:07:17,778   !!
2026-02-16T22:07:17,779     self._finalize_license_expression()
2026-02-16T22:07:17,780   running egg_info
2026-02-16T22:07:17,787   writing src/tome_mcp.egg-info/PKG-INFO
2026-02-16T22:07:17,793   writing dependency_links to src/tome_mcp.egg-info/dependency_links.txt
2026-02-16T22:07:17,795   writing entry points to src/tome_mcp.egg-info/entry_points.txt
2026-02-16T22:07:17,798   writing requirements to src/tome_mcp.egg-info/requires.txt
2026-02-16T22:07:17,800   writing top-level names to src/tome_mcp.egg-info/top_level.txt
2026-02-16T22:07:17,850   listing git files failed - pretending there aren't any
2026-02-16T22:07:17,857   reading manifest file 'src/tome_mcp.egg-info/SOURCES.txt'
2026-02-16T22:07:17,867   adding license file 'LICENSE'
2026-02-16T22:07:17,874   writing manifest file 'src/tome_mcp.egg-info/SOURCES.txt'
2026-02-16T22:07:17,976   Getting requirements to build wheel: finished with status 'done'
2026-02-16T22:07:17,979   Created temporary directory: /tmp/pip-modern-metadata-q24km41v
2026-02-16T22:07:17,982   Preparing metadata (pyproject.toml): started
2026-02-16T22:07:17,983   Running command Preparing metadata (pyproject.toml)
2026-02-16T22:07:18,582   toml section missing PosixPath('pyproject.toml') does not contain a tool.setuptools_scm section
2026-02-16T22:07:18,617   /tmp/pip-build-env-g_8a493o/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated
2026-02-16T22:07:18,618   !!

2026-02-16T22:07:18,619           ********************************************************************************
2026-02-16T22:07:18,620           Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0).

2026-02-16T22:07:18,621           By 2027-Feb-18, you need to update your project and remove deprecated calls
2026-02-16T22:07:18,622           or your builds will no longer be supported.

2026-02-16T22:07:18,622           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-02-16T22:07:18,623           ********************************************************************************

2026-02-16T22:07:18,624   !!
2026-02-16T22:07:18,624     corresp(dist, value, root_dir)
2026-02-16T22:07:18,695   /tmp/pip-build-env-g_8a493o/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-02-16T22:07:18,695   !!

2026-02-16T22:07:18,696           ********************************************************************************
2026-02-16T22:07:18,697           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-02-16T22:07:18,698           License :: OSI Approved :: GNU Affero General Public License v3 or later (AGPLv3+)

2026-02-16T22:07:18,699           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-02-16T22:07:18,699           ********************************************************************************

2026-02-16T22:07:18,700   !!
2026-02-16T22:07:18,701     dist._finalize_license_expression()
2026-02-16T22:07:18,701   /tmp/pip-build-env-g_8a493o/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-02-16T22:07:18,702   !!

2026-02-16T22:07:18,703           ********************************************************************************
2026-02-16T22:07:18,703           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-02-16T22:07:18,704           License :: OSI Approved :: GNU Affero General Public License v3 or later (AGPLv3+)

2026-02-16T22:07:18,705           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-02-16T22:07:18,706           ********************************************************************************

2026-02-16T22:07:18,706   !!
2026-02-16T22:07:18,707     self._finalize_license_expression()
2026-02-16T22:07:18,708   running dist_info
2026-02-16T22:07:18,720   creating /tmp/pip-modern-metadata-q24km41v/tome_mcp.egg-info
2026-02-16T22:07:18,721   writing /tmp/pip-modern-metadata-q24km41v/tome_mcp.egg-info/PKG-INFO
2026-02-16T22:07:18,728   writing dependency_links to /tmp/pip-modern-metadata-q24km41v/tome_mcp.egg-info/dependency_links.txt
2026-02-16T22:07:18,729   writing entry points to /tmp/pip-modern-metadata-q24km41v/tome_mcp.egg-info/entry_points.txt
2026-02-16T22:07:18,733   writing requirements to /tmp/pip-modern-metadata-q24km41v/tome_mcp.egg-info/requires.txt
2026-02-16T22:07:18,734   writing top-level names to /tmp/pip-modern-metadata-q24km41v/tome_mcp.egg-info/top_level.txt
2026-02-16T22:07:18,735   writing manifest file '/tmp/pip-modern-metadata-q24km41v/tome_mcp.egg-info/SOURCES.txt'
2026-02-16T22:07:18,781   listing git files failed - pretending there aren't any
2026-02-16T22:07:18,787   reading manifest file '/tmp/pip-modern-metadata-q24km41v/tome_mcp.egg-info/SOURCES.txt'
2026-02-16T22:07:18,789   adding license file 'LICENSE'
2026-02-16T22:07:18,794   writing manifest file '/tmp/pip-modern-metadata-q24km41v/tome_mcp.egg-info/SOURCES.txt'
2026-02-16T22:07:18,795   creating '/tmp/pip-modern-metadata-q24km41v/tome_mcp-0.4.0.dist-info'
2026-02-16T22:07:18,927   Preparing metadata (pyproject.toml): finished with status 'done'
2026-02-16T22:07:18,933   Source in /tmp/pip-wheel-6poa9ure/tome-mcp_0a40d6ca34c54baa813197f2c8198f19 has version 0.4.0, which satisfies requirement tome-mcp==0.4.0 from https://files.pythonhosted.org/packages/09/68/dadbfe7d99875908922cfba2edd90e7e63e1fbd2c43369ee2ff9c758d5a7/tome_mcp-0.4.0.tar.gz
2026-02-16T22:07:18,934   Removed tome-mcp==0.4.0 from https://files.pythonhosted.org/packages/09/68/dadbfe7d99875908922cfba2edd90e7e63e1fbd2c43369ee2ff9c758d5a7/tome_mcp-0.4.0.tar.gz from build tracker '/tmp/pip-build-tracker-mwo866be'
2026-02-16T22:07:18,943 Created temporary directory: /tmp/pip-unpack-34jp3s5s
2026-02-16T22:07:18,943 Building wheels for collected packages: tome-mcp
2026-02-16T22:07:18,948   Created temporary directory: /tmp/pip-wheel-t82o9eve
2026-02-16T22:07:18,948   Destination directory: /tmp/pip-wheel-t82o9eve
2026-02-16T22:07:18,951   Building wheel for tome-mcp (pyproject.toml): started
2026-02-16T22:07:18,952   Running command Building wheel for tome-mcp (pyproject.toml)
2026-02-16T22:07:19,544   toml section missing PosixPath('pyproject.toml') does not contain a tool.setuptools_scm section
2026-02-16T22:07:19,579   /tmp/pip-build-env-g_8a493o/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated
2026-02-16T22:07:19,579   !!

2026-02-16T22:07:19,580           ********************************************************************************
2026-02-16T22:07:19,581           Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0).

2026-02-16T22:07:19,582           By 2027-Feb-18, you need to update your project and remove deprecated calls
2026-02-16T22:07:19,582           or your builds will no longer be supported.

2026-02-16T22:07:19,583           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-02-16T22:07:19,584           ********************************************************************************

2026-02-16T22:07:19,585   !!
2026-02-16T22:07:19,585     corresp(dist, value, root_dir)
2026-02-16T22:07:19,651   /tmp/pip-build-env-g_8a493o/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-02-16T22:07:19,651   !!

2026-02-16T22:07:19,652           ********************************************************************************
2026-02-16T22:07:19,653           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-02-16T22:07:19,654           License :: OSI Approved :: GNU Affero General Public License v3 or later (AGPLv3+)

2026-02-16T22:07:19,655           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-02-16T22:07:19,656           ********************************************************************************

2026-02-16T22:07:19,657   !!
2026-02-16T22:07:19,658     dist._finalize_license_expression()
2026-02-16T22:07:19,658   /tmp/pip-build-env-g_8a493o/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-02-16T22:07:19,659   !!

2026-02-16T22:07:19,660           ********************************************************************************
2026-02-16T22:07:19,661           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-02-16T22:07:19,662           License :: OSI Approved :: GNU Affero General Public License v3 or later (AGPLv3+)

2026-02-16T22:07:19,663           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-02-16T22:07:19,664           ********************************************************************************

2026-02-16T22:07:19,665   !!
2026-02-16T22:07:19,665     self._finalize_license_expression()
2026-02-16T22:07:19,666   running bdist_wheel
2026-02-16T22:07:19,681   running build
2026-02-16T22:07:19,682   running build_py
2026-02-16T22:07:19,690   creating build/lib/tome
2026-02-16T22:07:19,692   copying src/tome/find_text.py -> build/lib/tome
2026-02-16T22:07:19,695   copying src/tome/analysis.py -> build/lib/tome
2026-02-16T22:07:19,698   copying src/tome/identify.py -> build/lib/tome
2026-02-16T22:07:19,700   copying src/tome/figures.py -> build/lib/tome
2026-02-16T22:07:19,702   copying src/tome/guide.py -> build/lib/tome
2026-02-16T22:07:19,705   copying src/tome/ingest.py -> build/lib/tome
2026-02-16T22:07:19,707   copying src/tome/index.py -> build/lib/tome
2026-02-16T22:07:19,710   copying src/tome/store.py -> build/lib/tome
2026-02-16T22:07:19,712   copying src/tome/paths.py -> build/lib/tome
2026-02-16T22:07:19,714   copying src/tome/validate_vault.py -> build/lib/tome
2026-02-16T22:07:19,717   copying src/tome/__init__.py -> build/lib/tome
2026-02-16T22:07:19,719   copying src/tome/validate.py -> build/lib/tome
2026-02-16T22:07:19,721   copying src/tome/file_meta.py -> build/lib/tome
2026-02-16T22:07:19,723   copying src/tome/s2ag_cli.py -> build/lib/tome
2026-02-16T22:07:19,725   copying src/tome/errors.py -> build/lib/tome
2026-02-16T22:07:19,727   copying src/tome/s2ag.py -> build/lib/tome
2026-02-16T22:07:19,730   copying src/tome/latex.py -> build/lib/tome
2026-02-16T22:07:19,733   copying src/tome/rejected_dois.py -> build/lib/tome
2026-02-16T22:07:19,734   copying src/tome/server.py -> build/lib/tome
2026-02-16T22:07:19,740   copying src/tome/needful.py -> build/lib/tome
2026-02-16T22:07:19,742   copying src/tome/http.py -> build/lib/tome
2026-02-16T22:07:19,744   copying src/tome/grep_raw.py -> build/lib/tome
2026-02-16T22:07:19,747   copying src/tome/extract.py -> build/lib/tome
2026-02-16T22:07:19,749   copying src/tome/crossref.py -> build/lib/tome
2026-02-16T22:07:19,751   copying src/tome/slug.py -> build/lib/tome
2026-02-16T22:07:19,753   copying src/tome/config.py -> build/lib/tome
2026-02-16T22:07:19,756   copying src/tome/chunk.py -> build/lib/tome
2026-02-16T22:07:19,758   copying src/tome/cite_tree.py -> build/lib/tome
2026-02-16T22:07:19,760   copying src/tome/semantic_scholar.py -> build/lib/tome
2026-02-16T22:07:19,763   copying src/tome/manifest.py -> build/lib/tome
2026-02-16T22:07:19,765   copying src/tome/toc.py -> build/lib/tome
2026-02-16T22:07:19,767   copying src/tome/call_log.py -> build/lib/tome
2026-02-16T22:07:19,769   copying src/tome/__main__.py -> build/lib/tome
2026-02-16T22:07:19,771   copying src/tome/git_diff.py -> build/lib/tome
2026-02-16T22:07:19,774   copying src/tome/checksum.py -> build/lib/tome
2026-02-16T22:07:19,776   copying src/tome/openalex.py -> build/lib/tome
2026-02-16T22:07:19,778   copying src/tome/summaries.py -> build/lib/tome
2026-02-16T22:07:19,780   copying src/tome/issues.py -> build/lib/tome
2026-02-16T22:07:19,782   copying src/tome/vault.py -> build/lib/tome
2026-02-16T22:07:19,785   copying src/tome/bib.py -> build/lib/tome
2026-02-16T22:07:19,788   copying src/tome/notes.py -> build/lib/tome
2026-02-16T22:07:19,790   copying src/tome/filelock.py -> build/lib/tome
2026-02-16T22:07:19,792   copying src/tome/unpaywall.py -> build/lib/tome
2026-02-16T22:07:19,794   running egg_info
2026-02-16T22:07:19,806   writing src/tome_mcp.egg-info/PKG-INFO
2026-02-16T22:07:19,812   writing dependency_links to src/tome_mcp.egg-info/dependency_links.txt
2026-02-16T22:07:19,814   writing entry points to src/tome_mcp.egg-info/entry_points.txt
2026-02-16T22:07:19,816   writing requirements to src/tome_mcp.egg-info/requires.txt
2026-02-16T22:07:19,818   writing top-level names to src/tome_mcp.egg-info/top_level.txt
2026-02-16T22:07:19,852   listing git files failed - pretending there aren't any
2026-02-16T22:07:19,858   reading manifest file 'src/tome_mcp.egg-info/SOURCES.txt'
2026-02-16T22:07:19,866   adding license file 'LICENSE'
2026-02-16T22:07:19,873   writing manifest file 'src/tome_mcp.egg-info/SOURCES.txt'
2026-02-16T22:07:19,878   copying src/tome/py.typed -> build/lib/tome
2026-02-16T22:07:19,880   creating build/lib/tome/docs
2026-02-16T22:07:19,881   copying src/tome/docs/configuration.md -> build/lib/tome/docs
2026-02-16T22:07:19,883   copying src/tome/docs/directory-layout.md -> build/lib/tome/docs
2026-02-16T22:07:19,886   copying src/tome/docs/document-analysis.md -> build/lib/tome/docs
2026-02-16T22:07:19,888   copying src/tome/docs/exploration.md -> build/lib/tome/docs
2026-02-16T22:07:19,891   copying src/tome/docs/getting-started.md -> build/lib/tome/docs
2026-02-16T22:07:19,893   copying src/tome/docs/needful.md -> build/lib/tome/docs
2026-02-16T22:07:19,895   copying src/tome/docs/notes.md -> build/lib/tome/docs
2026-02-16T22:07:19,897   copying src/tome/docs/paper-workflow.md -> build/lib/tome/docs
2026-02-16T22:07:19,900   copying src/tome/docs/reporting-issues.md -> build/lib/tome/docs
2026-02-16T22:07:19,903   copying src/tome/docs/review-cycle.md -> build/lib/tome/docs
2026-02-16T22:07:19,905   copying src/tome/docs/search.md -> build/lib/tome/docs
2026-02-16T22:07:19,921   installing to build/bdist.linux-armv7l/wheel
2026-02-16T22:07:19,921   running install
2026-02-16T22:07:19,944   running install_lib
2026-02-16T22:07:19,951   creating build/bdist.linux-armv7l/wheel
2026-02-16T22:07:19,953   creating build/bdist.linux-armv7l/wheel/tome
2026-02-16T22:07:19,955   copying build/lib/tome/find_text.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:07:19,957   copying build/lib/tome/analysis.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:07:19,960   copying build/lib/tome/identify.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:07:19,962   copying build/lib/tome/figures.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:07:19,964   copying build/lib/tome/guide.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:07:19,967   copying build/lib/tome/ingest.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:07:19,969   copying build/lib/tome/index.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:07:19,972   copying build/lib/tome/store.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:07:19,974   copying build/lib/tome/paths.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:07:19,976   copying build/lib/tome/validate_vault.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:07:19,979   copying build/lib/tome/__init__.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:07:19,981   copying build/lib/tome/validate.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:07:19,983   copying build/lib/tome/file_meta.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:07:19,985   copying build/lib/tome/s2ag_cli.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:07:19,987   copying build/lib/tome/errors.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:07:19,989   copying build/lib/tome/s2ag.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:07:19,992   copying build/lib/tome/latex.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:07:19,995   copying build/lib/tome/rejected_dois.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:07:19,997   copying build/lib/tome/server.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:07:20,002   copying build/lib/tome/needful.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:07:20,004   copying build/lib/tome/http.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:07:20,006   copying build/lib/tome/grep_raw.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:07:20,009   copying build/lib/tome/extract.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:07:20,011   copying build/lib/tome/crossref.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:07:20,013   copying build/lib/tome/slug.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:07:20,015   copying build/lib/tome/config.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:07:20,018   copying build/lib/tome/py.typed -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:07:20,019   copying build/lib/tome/chunk.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:07:20,021   copying build/lib/tome/cite_tree.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:07:20,024   copying build/lib/tome/semantic_scholar.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:07:20,027   creating build/bdist.linux-armv7l/wheel/tome/docs
2026-02-16T22:07:20,028   copying build/lib/tome/docs/reporting-issues.md -> build/bdist.linux-armv7l/wheel/./tome/docs
2026-02-16T22:07:20,031   copying build/lib/tome/docs/review-cycle.md -> build/bdist.linux-armv7l/wheel/./tome/docs
2026-02-16T22:07:20,033   copying build/lib/tome/docs/getting-started.md -> build/bdist.linux-armv7l/wheel/./tome/docs
2026-02-16T22:07:20,035   copying build/lib/tome/docs/document-analysis.md -> build/bdist.linux-armv7l/wheel/./tome/docs
2026-02-16T22:07:20,037   copying build/lib/tome/docs/paper-workflow.md -> build/bdist.linux-armv7l/wheel/./tome/docs
2026-02-16T22:07:20,039   copying build/lib/tome/docs/needful.md -> build/bdist.linux-armv7l/wheel/./tome/docs
2026-02-16T22:07:20,041   copying build/lib/tome/docs/search.md -> build/bdist.linux-armv7l/wheel/./tome/docs
2026-02-16T22:07:20,043   copying build/lib/tome/docs/exploration.md -> build/bdist.linux-armv7l/wheel/./tome/docs
2026-02-16T22:07:20,045   copying build/lib/tome/docs/configuration.md -> build/bdist.linux-armv7l/wheel/./tome/docs
2026-02-16T22:07:20,047   copying build/lib/tome/docs/notes.md -> build/bdist.linux-armv7l/wheel/./tome/docs
2026-02-16T22:07:20,049   copying build/lib/tome/docs/directory-layout.md -> build/bdist.linux-armv7l/wheel/./tome/docs
2026-02-16T22:07:20,051   copying build/lib/tome/manifest.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:07:20,052   copying build/lib/tome/toc.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:07:20,055   copying build/lib/tome/call_log.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:07:20,057   copying build/lib/tome/__main__.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:07:20,059   copying build/lib/tome/git_diff.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:07:20,061   copying build/lib/tome/checksum.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:07:20,063   copying build/lib/tome/openalex.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:07:20,065   copying build/lib/tome/summaries.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:07:20,067   copying build/lib/tome/issues.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:07:20,070   copying build/lib/tome/vault.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:07:20,072   copying build/lib/tome/bib.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:07:20,074   copying build/lib/tome/notes.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:07:20,076   copying build/lib/tome/filelock.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:07:20,078   copying build/lib/tome/unpaywall.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:07:20,080   running install_egg_info
2026-02-16T22:07:20,086   Copying src/tome_mcp.egg-info to build/bdist.linux-armv7l/wheel/./tome_mcp-0.4.0-py3.11.egg-info
2026-02-16T22:07:20,099   running install_scripts
2026-02-16T22:07:20,112   creating build/bdist.linux-armv7l/wheel/tome_mcp-0.4.0.dist-info/WHEEL
2026-02-16T22:07:20,115   creating '/tmp/pip-wheel-t82o9eve/.tmp-oqk_q0ug/tome_mcp-0.4.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2026-02-16T22:07:20,118   adding 'tome/__init__.py'
2026-02-16T22:07:20,119   adding 'tome/__main__.py'
2026-02-16T22:07:20,122   adding 'tome/analysis.py'
2026-02-16T22:07:20,124   adding 'tome/bib.py'
2026-02-16T22:07:20,125   adding 'tome/call_log.py'
2026-02-16T22:07:20,126   adding 'tome/checksum.py'
2026-02-16T22:07:20,128   adding 'tome/chunk.py'
2026-02-16T22:07:20,131   adding 'tome/cite_tree.py'
2026-02-16T22:07:20,133   adding 'tome/config.py'
2026-02-16T22:07:20,134   adding 'tome/crossref.py'
2026-02-16T22:07:20,136   adding 'tome/errors.py'
2026-02-16T22:07:20,138   adding 'tome/extract.py'
2026-02-16T22:07:20,140   adding 'tome/figures.py'
2026-02-16T22:07:20,142   adding 'tome/file_meta.py'
2026-02-16T22:07:20,143   adding 'tome/filelock.py'
2026-02-16T22:07:20,145   adding 'tome/find_text.py'
2026-02-16T22:07:20,147   adding 'tome/git_diff.py'
2026-02-16T22:07:20,150   adding 'tome/grep_raw.py'
2026-02-16T22:07:20,151   adding 'tome/guide.py'
2026-02-16T22:07:20,153   adding 'tome/http.py'
2026-02-16T22:07:20,154   adding 'tome/identify.py'
2026-02-16T22:07:20,156   adding 'tome/index.py'
2026-02-16T22:07:20,158   adding 'tome/ingest.py'
2026-02-16T22:07:20,160   adding 'tome/issues.py'
2026-02-16T22:07:20,162   adding 'tome/latex.py'
2026-02-16T22:07:20,163   adding 'tome/manifest.py'
2026-02-16T22:07:20,165   adding 'tome/needful.py'
2026-02-16T22:07:20,166   adding 'tome/notes.py'
2026-02-16T22:07:20,168   adding 'tome/openalex.py'
2026-02-16T22:07:20,169   adding 'tome/paths.py'
2026-02-16T22:07:20,170   adding 'tome/py.typed'
2026-02-16T22:07:20,171   adding 'tome/rejected_dois.py'
2026-02-16T22:07:20,175   adding 'tome/s2ag.py'
2026-02-16T22:07:20,176   adding 'tome/s2ag_cli.py'
2026-02-16T22:07:20,178   adding 'tome/semantic_scholar.py'
2026-02-16T22:07:20,197   adding 'tome/server.py'
2026-02-16T22:07:20,199   adding 'tome/slug.py'
2026-02-16T22:07:20,201   adding 'tome/store.py'
2026-02-16T22:07:20,203   adding 'tome/summaries.py'
2026-02-16T22:07:20,206   adding 'tome/toc.py'
2026-02-16T22:07:20,208   adding 'tome/unpaywall.py'
2026-02-16T22:07:20,209   adding 'tome/validate.py'
2026-02-16T22:07:20,212   adding 'tome/validate_vault.py'
2026-02-16T22:07:20,215   adding 'tome/vault.py'
2026-02-16T22:07:20,217   adding 'tome/docs/configuration.md'
2026-02-16T22:07:20,218   adding 'tome/docs/directory-layout.md'
2026-02-16T22:07:20,220   adding 'tome/docs/document-analysis.md'
2026-02-16T22:07:20,221   adding 'tome/docs/exploration.md'
2026-02-16T22:07:20,222   adding 'tome/docs/getting-started.md'
2026-02-16T22:07:20,224   adding 'tome/docs/needful.md'
2026-02-16T22:07:20,225   adding 'tome/docs/notes.md'
2026-02-16T22:07:20,226   adding 'tome/docs/paper-workflow.md'
2026-02-16T22:07:20,228   adding 'tome/docs/reporting-issues.md'
2026-02-16T22:07:20,229   adding 'tome/docs/review-cycle.md'
2026-02-16T22:07:20,230   adding 'tome/docs/search.md'
2026-02-16T22:07:20,238   adding 'tome_mcp-0.4.0.dist-info/licenses/LICENSE'
2026-02-16T22:07:20,241   adding 'tome_mcp-0.4.0.dist-info/METADATA'
2026-02-16T22:07:20,242   adding 'tome_mcp-0.4.0.dist-info/WHEEL'
2026-02-16T22:07:20,243   adding 'tome_mcp-0.4.0.dist-info/entry_points.txt'
2026-02-16T22:07:20,244   adding 'tome_mcp-0.4.0.dist-info/top_level.txt'
2026-02-16T22:07:20,245   adding 'tome_mcp-0.4.0.dist-info/RECORD'
2026-02-16T22:07:20,249   removing build/bdist.linux-armv7l/wheel
2026-02-16T22:07:20,366   Building wheel for tome-mcp (pyproject.toml): finished with status 'done'
2026-02-16T22:07:20,376   Created wheel for tome-mcp: filename=tome_mcp-0.4.0-py3-none-any.whl size=193500 sha256=d47d863455237f9edaaa169d7a48ad4846e772e59ed6b31e7a3375e7d84dc7b8
2026-02-16T22:07:20,377   Stored in directory: /tmp/pip-ephem-wheel-cache-7hv7_fj1/wheels/f8/a4/84/1e67db7cda43eb7bf308c6e44b95235293cd833ac841a810af
2026-02-16T22:07:20,395 Successfully built tome-mcp
2026-02-16T22:07:20,405 Removed build tracker: '/tmp/pip-build-tracker-mwo866be'