2026-02-16T22:08:08,092 Created temporary directory: /tmp/pip-ephem-wheel-cache-kq9fefdz
2026-02-16T22:08:08,094 Created temporary directory: /tmp/pip-build-tracker-ur1wu91s
2026-02-16T22:08:08,095 Initialized build tracking at /tmp/pip-build-tracker-ur1wu91s
2026-02-16T22:08:08,095 Created build tracker: /tmp/pip-build-tracker-ur1wu91s
2026-02-16T22:08:08,096 Entered build tracker: /tmp/pip-build-tracker-ur1wu91s
2026-02-16T22:08:08,097 Created temporary directory: /tmp/pip-wheel-crbs7ghp
2026-02-16T22:08:08,100 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-02-16T22:08:08,102 Created temporary directory: /tmp/pip-ephem-wheel-cache-c4pyfxsc
2026-02-16T22:08:08,124 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-02-16T22:08:08,128 2 location(s) to search for versions of tome-mcp:
2026-02-16T22:08:08,128 * https://pypi.org/simple/tome-mcp/
2026-02-16T22:08:08,128 * https://www.piwheels.org/simple/tome-mcp/
2026-02-16T22:08:08,129 Fetching project page and analyzing links: https://pypi.org/simple/tome-mcp/
2026-02-16T22:08:08,130 Getting page https://pypi.org/simple/tome-mcp/
2026-02-16T22:08:08,131 Found index url https://pypi.org/simple
2026-02-16T22:08:08,347 Fetched page https://pypi.org/simple/tome-mcp/ as application/vnd.pypi.simple.v1+json
2026-02-16T22:08:08,349   Skipping link: No binaries permitted for tome-mcp: https://files.pythonhosted.org/packages/79/5d/482c97c6272d3c09a8ea99bbfeb6bff17511870afef6ef99b96a5c88819e/tome_mcp-0.1.0-py3-none-any.whl (from https://pypi.org/simple/tome-mcp/) (requires-python:>=3.11)
2026-02-16T22:08:08,351   Found link https://files.pythonhosted.org/packages/9a/53/997d7fb56a1a56dab9b8ce9e196abeec8ffa5798b0d5c13555a75aec1195/tome_mcp-0.1.0.tar.gz (from https://pypi.org/simple/tome-mcp/) (requires-python:>=3.11), version: 0.1.0
2026-02-16T22:08:08,351   Skipping link: No binaries permitted for tome-mcp: https://files.pythonhosted.org/packages/54/cc/edf9ca47f196ac8bfe1a8ee8251ea1c7f6f5344d2fa13adee406ccd8d61e/tome_mcp-0.2.0-py3-none-any.whl (from https://pypi.org/simple/tome-mcp/) (requires-python:>=3.11)
2026-02-16T22:08:08,353   Found link https://files.pythonhosted.org/packages/3e/47/8fe3a73f3553f8889acf830d6fa83fc23d916a538a8a489d3a3bd86e8b8f/tome_mcp-0.2.0.tar.gz (from https://pypi.org/simple/tome-mcp/) (requires-python:>=3.11), version: 0.2.0
2026-02-16T22:08:08,354   Skipping link: No binaries permitted for tome-mcp: https://files.pythonhosted.org/packages/73/e2/20f5aa183b30c5f8ac14d343296450418ae71c438fe6da8dad8b6112c92d/tome_mcp-0.4.0-py3-none-any.whl (from https://pypi.org/simple/tome-mcp/) (requires-python:>=3.11)
2026-02-16T22:08:08,355   Found link https://files.pythonhosted.org/packages/09/68/dadbfe7d99875908922cfba2edd90e7e63e1fbd2c43369ee2ff9c758d5a7/tome_mcp-0.4.0.tar.gz (from https://pypi.org/simple/tome-mcp/) (requires-python:>=3.11), version: 0.4.0
2026-02-16T22:08:08,356   Skipping link: No binaries permitted for tome-mcp: https://files.pythonhosted.org/packages/ec/b2/72f2db2c5df35e0e3f69f07b50ba6f6e7674f2bca254b88092eaaf5d4f4f/tome_mcp-0.5.0-py3-none-any.whl (from https://pypi.org/simple/tome-mcp/) (requires-python:>=3.11)
2026-02-16T22:08:08,357   Found link https://files.pythonhosted.org/packages/cf/6a/8ed1a9561b4f4131e81c87675d1d64ffc6af50c44985056ae200c487bdb3/tome_mcp-0.5.0.tar.gz (from https://pypi.org/simple/tome-mcp/) (requires-python:>=3.11), version: 0.5.0
2026-02-16T22:08:08,358 Fetching project page and analyzing links: https://www.piwheels.org/simple/tome-mcp/
2026-02-16T22:08:08,359 Getting page https://www.piwheels.org/simple/tome-mcp/
2026-02-16T22:08:08,361 Found index url https://www.piwheels.org/simple
2026-02-16T22:08:08,727 Fetched page https://www.piwheels.org/simple/tome-mcp/ as text/html
2026-02-16T22:08:08,729   Skipping link: No binaries permitted for tome-mcp: https://www.piwheels.org/simple/tome-mcp/tome_mcp-0.2.0-py3-none-any.whl#sha256=d3f9c16b6bde4d18bddab829596f8388a99d14fb0954d50a37f3668276c5d8ab (from https://www.piwheels.org/simple/tome-mcp/) (requires-python:>=3.11)
2026-02-16T22:08:08,730   Skipping link: No binaries permitted for tome-mcp: https://www.piwheels.org/simple/tome-mcp/tome_mcp-0.1.0-py3-none-any.whl#sha256=1be9998e6345aa3f526ae3e1edc9ecf25ce237b14a2e89f8e490704feaa3dfe1 (from https://www.piwheels.org/simple/tome-mcp/) (requires-python:>=3.11)
2026-02-16T22:08:08,730 Skipping link: not a file: https://www.piwheels.org/simple/tome-mcp/
2026-02-16T22:08:08,731 Skipping link: not a file: https://pypi.org/simple/tome-mcp/
2026-02-16T22:08:08,752 Given no hashes to check 1 links for project 'tome-mcp': discarding no candidates
2026-02-16T22:08:08,771 Collecting tome-mcp==0.5.0
2026-02-16T22:08:08,774   Created temporary directory: /tmp/pip-unpack-imafodm_
2026-02-16T22:08:08,985   Downloading tome_mcp-0.5.0.tar.gz (266 kB)
2026-02-16T22:08:09,393   Added tome-mcp==0.5.0 from https://files.pythonhosted.org/packages/cf/6a/8ed1a9561b4f4131e81c87675d1d64ffc6af50c44985056ae200c487bdb3/tome_mcp-0.5.0.tar.gz to build tracker '/tmp/pip-build-tracker-ur1wu91s'
2026-02-16T22:08:09,400   Created temporary directory: /tmp/pip-build-env-q948i0eh
2026-02-16T22:08:09,404   Installing build dependencies: started
2026-02-16T22:08:09,405   Running command pip subprocess to install build dependencies
2026-02-16T22:08:10,529   Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11)
2026-02-16T22:08:11,108   DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-02-16T22:08:11,132   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-02-16T22:08:12,842   Collecting setuptools>=68.0
2026-02-16T22:08:12,938     Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.0-py3-none-any.whl (1.0 MB)
2026-02-16T22:08:13,315   Collecting setuptools-scm>=8.0
2026-02-16T22:08:13,336     Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-9.2.2-py3-none-any.whl (62 kB)
2026-02-16T22:08:13,531   Collecting packaging>=20
2026-02-16T22:08:13,549     Using cached https://www.piwheels.org/simple/packaging/packaging-26.0-py3-none-any.whl (74 kB)
2026-02-16T22:08:16,539   Installing collected packages: setuptools, packaging, setuptools-scm
2026-02-16T22:08:20,114     Creating /tmp/pip-build-env-q948i0eh/overlay/local/bin
2026-02-16T22:08:20,117     changing mode of /tmp/pip-build-env-q948i0eh/overlay/local/bin/setuptools-scm to 755
2026-02-16T22:08:20,140   Successfully installed packaging-26.0 setuptools-82.0.0 setuptools-scm-9.2.2
2026-02-16T22:08:20,424   Installing build dependencies: finished with status 'done'
2026-02-16T22:08:20,430   Getting requirements to build wheel: started
2026-02-16T22:08:20,432   Running command Getting requirements to build wheel
2026-02-16T22:08:21,046   toml section missing PosixPath('pyproject.toml') does not contain a tool.setuptools_scm section
2026-02-16T22:08:21,085   /tmp/pip-build-env-q948i0eh/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated
2026-02-16T22:08:21,086   !!

2026-02-16T22:08:21,087           ********************************************************************************
2026-02-16T22:08:21,088           Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0).

2026-02-16T22:08:21,089           By 2027-Feb-18, you need to update your project and remove deprecated calls
2026-02-16T22:08:21,090           or your builds will no longer be supported.

2026-02-16T22:08:21,091           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-02-16T22:08:21,091           ********************************************************************************

2026-02-16T22:08:21,092   !!
2026-02-16T22:08:21,093     corresp(dist, value, root_dir)
2026-02-16T22:08:21,173   /tmp/pip-build-env-q948i0eh/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-02-16T22:08:21,174   !!

2026-02-16T22:08:21,175           ********************************************************************************
2026-02-16T22:08:21,175           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-02-16T22:08:21,176           License :: OSI Approved :: GNU Affero General Public License v3 or later (AGPLv3+)

2026-02-16T22:08:21,177           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-02-16T22:08:21,178           ********************************************************************************

2026-02-16T22:08:21,179   !!
2026-02-16T22:08:21,179     dist._finalize_license_expression()
2026-02-16T22:08:21,180   /tmp/pip-build-env-q948i0eh/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-02-16T22:08:21,180   !!

2026-02-16T22:08:21,181           ********************************************************************************
2026-02-16T22:08:21,182           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-02-16T22:08:21,183           License :: OSI Approved :: GNU Affero General Public License v3 or later (AGPLv3+)

2026-02-16T22:08:21,184           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-02-16T22:08:21,185           ********************************************************************************

2026-02-16T22:08:21,186   !!
2026-02-16T22:08:21,187     self._finalize_license_expression()
2026-02-16T22:08:21,188   running egg_info
2026-02-16T22:08:21,195   writing src/tome_mcp.egg-info/PKG-INFO
2026-02-16T22:08:21,202   writing dependency_links to src/tome_mcp.egg-info/dependency_links.txt
2026-02-16T22:08:21,204   writing entry points to src/tome_mcp.egg-info/entry_points.txt
2026-02-16T22:08:21,207   writing requirements to src/tome_mcp.egg-info/requires.txt
2026-02-16T22:08:21,208   writing top-level names to src/tome_mcp.egg-info/top_level.txt
2026-02-16T22:08:21,260   listing git files failed - pretending there aren't any
2026-02-16T22:08:21,267   reading manifest file 'src/tome_mcp.egg-info/SOURCES.txt'
2026-02-16T22:08:21,277   adding license file 'LICENSE'
2026-02-16T22:08:21,284   writing manifest file 'src/tome_mcp.egg-info/SOURCES.txt'
2026-02-16T22:08:21,385   Getting requirements to build wheel: finished with status 'done'
2026-02-16T22:08:21,389   Created temporary directory: /tmp/pip-modern-metadata-9dc_qx2t
2026-02-16T22:08:21,392   Preparing metadata (pyproject.toml): started
2026-02-16T22:08:21,393   Running command Preparing metadata (pyproject.toml)
2026-02-16T22:08:21,987   toml section missing PosixPath('pyproject.toml') does not contain a tool.setuptools_scm section
2026-02-16T22:08:22,024   /tmp/pip-build-env-q948i0eh/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated
2026-02-16T22:08:22,025   !!

2026-02-16T22:08:22,027           ********************************************************************************
2026-02-16T22:08:22,027           Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0).

2026-02-16T22:08:22,029           By 2027-Feb-18, you need to update your project and remove deprecated calls
2026-02-16T22:08:22,029           or your builds will no longer be supported.

2026-02-16T22:08:22,030           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-02-16T22:08:22,031           ********************************************************************************

2026-02-16T22:08:22,031   !!
2026-02-16T22:08:22,032     corresp(dist, value, root_dir)
2026-02-16T22:08:22,104   /tmp/pip-build-env-q948i0eh/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-02-16T22:08:22,105   !!

2026-02-16T22:08:22,106           ********************************************************************************
2026-02-16T22:08:22,106           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-02-16T22:08:22,107           License :: OSI Approved :: GNU Affero General Public License v3 or later (AGPLv3+)

2026-02-16T22:08:22,108           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-02-16T22:08:22,109           ********************************************************************************

2026-02-16T22:08:22,110   !!
2026-02-16T22:08:22,110     dist._finalize_license_expression()
2026-02-16T22:08:22,111   /tmp/pip-build-env-q948i0eh/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-02-16T22:08:22,111   !!

2026-02-16T22:08:22,112           ********************************************************************************
2026-02-16T22:08:22,113           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-02-16T22:08:22,114           License :: OSI Approved :: GNU Affero General Public License v3 or later (AGPLv3+)

2026-02-16T22:08:22,115           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-02-16T22:08:22,116           ********************************************************************************

2026-02-16T22:08:22,117   !!
2026-02-16T22:08:22,118     self._finalize_license_expression()
2026-02-16T22:08:22,119   running dist_info
2026-02-16T22:08:22,132   creating /tmp/pip-modern-metadata-9dc_qx2t/tome_mcp.egg-info
2026-02-16T22:08:22,133   writing /tmp/pip-modern-metadata-9dc_qx2t/tome_mcp.egg-info/PKG-INFO
2026-02-16T22:08:22,139   writing dependency_links to /tmp/pip-modern-metadata-9dc_qx2t/tome_mcp.egg-info/dependency_links.txt
2026-02-16T22:08:22,141   writing entry points to /tmp/pip-modern-metadata-9dc_qx2t/tome_mcp.egg-info/entry_points.txt
2026-02-16T22:08:22,144   writing requirements to /tmp/pip-modern-metadata-9dc_qx2t/tome_mcp.egg-info/requires.txt
2026-02-16T22:08:22,146   writing top-level names to /tmp/pip-modern-metadata-9dc_qx2t/tome_mcp.egg-info/top_level.txt
2026-02-16T22:08:22,147   writing manifest file '/tmp/pip-modern-metadata-9dc_qx2t/tome_mcp.egg-info/SOURCES.txt'
2026-02-16T22:08:22,194   listing git files failed - pretending there aren't any
2026-02-16T22:08:22,200   reading manifest file '/tmp/pip-modern-metadata-9dc_qx2t/tome_mcp.egg-info/SOURCES.txt'
2026-02-16T22:08:22,202   adding license file 'LICENSE'
2026-02-16T22:08:22,207   writing manifest file '/tmp/pip-modern-metadata-9dc_qx2t/tome_mcp.egg-info/SOURCES.txt'
2026-02-16T22:08:22,208   creating '/tmp/pip-modern-metadata-9dc_qx2t/tome_mcp-0.5.0.dist-info'
2026-02-16T22:08:22,349   Preparing metadata (pyproject.toml): finished with status 'done'
2026-02-16T22:08:22,355   Source in /tmp/pip-wheel-crbs7ghp/tome-mcp_470a32b5e77e484a9564abea24b856df has version 0.5.0, which satisfies requirement tome-mcp==0.5.0 from https://files.pythonhosted.org/packages/cf/6a/8ed1a9561b4f4131e81c87675d1d64ffc6af50c44985056ae200c487bdb3/tome_mcp-0.5.0.tar.gz
2026-02-16T22:08:22,356   Removed tome-mcp==0.5.0 from https://files.pythonhosted.org/packages/cf/6a/8ed1a9561b4f4131e81c87675d1d64ffc6af50c44985056ae200c487bdb3/tome_mcp-0.5.0.tar.gz from build tracker '/tmp/pip-build-tracker-ur1wu91s'
2026-02-16T22:08:22,365 Created temporary directory: /tmp/pip-unpack-1s528fm_
2026-02-16T22:08:22,366 Building wheels for collected packages: tome-mcp
2026-02-16T22:08:22,370   Created temporary directory: /tmp/pip-wheel-v_8j_2bb
2026-02-16T22:08:22,371   Destination directory: /tmp/pip-wheel-v_8j_2bb
2026-02-16T22:08:22,373   Building wheel for tome-mcp (pyproject.toml): started
2026-02-16T22:08:22,374   Running command Building wheel for tome-mcp (pyproject.toml)
2026-02-16T22:08:22,969   toml section missing PosixPath('pyproject.toml') does not contain a tool.setuptools_scm section
2026-02-16T22:08:23,005   /tmp/pip-build-env-q948i0eh/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated
2026-02-16T22:08:23,006   !!

2026-02-16T22:08:23,007           ********************************************************************************
2026-02-16T22:08:23,008           Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0).

2026-02-16T22:08:23,009           By 2027-Feb-18, you need to update your project and remove deprecated calls
2026-02-16T22:08:23,009           or your builds will no longer be supported.

2026-02-16T22:08:23,010           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-02-16T22:08:23,011           ********************************************************************************

2026-02-16T22:08:23,012   !!
2026-02-16T22:08:23,013     corresp(dist, value, root_dir)
2026-02-16T22:08:23,078   /tmp/pip-build-env-q948i0eh/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-02-16T22:08:23,079   !!

2026-02-16T22:08:23,080           ********************************************************************************
2026-02-16T22:08:23,081           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-02-16T22:08:23,082           License :: OSI Approved :: GNU Affero General Public License v3 or later (AGPLv3+)

2026-02-16T22:08:23,083           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-02-16T22:08:23,084           ********************************************************************************

2026-02-16T22:08:23,085   !!
2026-02-16T22:08:23,086     dist._finalize_license_expression()
2026-02-16T22:08:23,086   /tmp/pip-build-env-q948i0eh/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2026-02-16T22:08:23,087   !!

2026-02-16T22:08:23,088           ********************************************************************************
2026-02-16T22:08:23,089           Please consider removing the following classifiers in favor of a SPDX license expression:

2026-02-16T22:08:23,090           License :: OSI Approved :: GNU Affero General Public License v3 or later (AGPLv3+)

2026-02-16T22:08:23,091           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2026-02-16T22:08:23,092           ********************************************************************************

2026-02-16T22:08:23,093   !!
2026-02-16T22:08:23,093     self._finalize_license_expression()
2026-02-16T22:08:23,094   running bdist_wheel
2026-02-16T22:08:23,108   running build
2026-02-16T22:08:23,109   running build_py
2026-02-16T22:08:23,117   creating build/lib/tome
2026-02-16T22:08:23,120   copying src/tome/extract.py -> build/lib/tome
2026-02-16T22:08:23,123   copying src/tome/needful.py -> build/lib/tome
2026-02-16T22:08:23,126   copying src/tome/manifest.py -> build/lib/tome
2026-02-16T22:08:23,128   copying src/tome/slug.py -> build/lib/tome
2026-02-16T22:08:23,130   copying src/tome/git_diff.py -> build/lib/tome
2026-02-16T22:08:23,132   copying src/tome/http.py -> build/lib/tome
2026-02-16T22:08:23,134   copying src/tome/rejected_dois.py -> build/lib/tome
2026-02-16T22:08:23,136   copying src/tome/grep_raw.py -> build/lib/tome
2026-02-16T22:08:23,138   copying src/tome/filelock.py -> build/lib/tome
2026-02-16T22:08:23,140   copying src/tome/server.py -> build/lib/tome
2026-02-16T22:08:23,145   copying src/tome/paths.py -> build/lib/tome
2026-02-16T22:08:23,147   copying src/tome/__main__.py -> build/lib/tome
2026-02-16T22:08:23,149   copying src/tome/figures.py -> build/lib/tome
2026-02-16T22:08:23,151   copying src/tome/openalex.py -> build/lib/tome
2026-02-16T22:08:23,153   copying src/tome/find_text.py -> build/lib/tome
2026-02-16T22:08:23,156   copying src/tome/checksum.py -> build/lib/tome
2026-02-16T22:08:23,157   copying src/tome/crossref.py -> build/lib/tome
2026-02-16T22:08:23,159   copying src/tome/bib.py -> build/lib/tome
2026-02-16T22:08:23,162   copying src/tome/semantic_scholar.py -> build/lib/tome
2026-02-16T22:08:23,165   copying src/tome/identify.py -> build/lib/tome
2026-02-16T22:08:23,167   copying src/tome/errors.py -> build/lib/tome
2026-02-16T22:08:23,169   copying src/tome/guide.py -> build/lib/tome
2026-02-16T22:08:23,172   copying src/tome/ingest.py -> build/lib/tome
2026-02-16T22:08:23,174   copying src/tome/__init__.py -> build/lib/tome
2026-02-16T22:08:23,176   copying src/tome/call_log.py -> build/lib/tome
2026-02-16T22:08:23,178   copying src/tome/file_meta.py -> build/lib/tome
2026-02-16T22:08:23,180   copying src/tome/config.py -> build/lib/tome
2026-02-16T22:08:23,183   copying src/tome/summaries.py -> build/lib/tome
2026-02-16T22:08:23,185   copying src/tome/s2ag_cli.py -> build/lib/tome
2026-02-16T22:08:23,187   copying src/tome/latex.py -> build/lib/tome
2026-02-16T22:08:23,190   copying src/tome/index.py -> build/lib/tome
2026-02-16T22:08:23,192   copying src/tome/validate_vault.py -> build/lib/tome
2026-02-16T22:08:23,195   copying src/tome/toc.py -> build/lib/tome
2026-02-16T22:08:23,197   copying src/tome/s2ag.py -> build/lib/tome
2026-02-16T22:08:23,200   copying src/tome/unpaywall.py -> build/lib/tome
2026-02-16T22:08:23,202   copying src/tome/notes.py -> build/lib/tome
2026-02-16T22:08:23,204   copying src/tome/chunk.py -> build/lib/tome
2026-02-16T22:08:23,207   copying src/tome/cite_tree.py -> build/lib/tome
2026-02-16T22:08:23,210   copying src/tome/analysis.py -> build/lib/tome
2026-02-16T22:08:23,212   copying src/tome/store.py -> build/lib/tome
2026-02-16T22:08:23,214   copying src/tome/validate.py -> build/lib/tome
2026-02-16T22:08:23,216   copying src/tome/vault.py -> build/lib/tome
2026-02-16T22:08:23,219   copying src/tome/issues.py -> build/lib/tome
2026-02-16T22:08:23,222   running egg_info
2026-02-16T22:08:23,234   writing src/tome_mcp.egg-info/PKG-INFO
2026-02-16T22:08:23,240   writing dependency_links to src/tome_mcp.egg-info/dependency_links.txt
2026-02-16T22:08:23,241   writing entry points to src/tome_mcp.egg-info/entry_points.txt
2026-02-16T22:08:23,244   writing requirements to src/tome_mcp.egg-info/requires.txt
2026-02-16T22:08:23,245   writing top-level names to src/tome_mcp.egg-info/top_level.txt
2026-02-16T22:08:23,279   listing git files failed - pretending there aren't any
2026-02-16T22:08:23,285   reading manifest file 'src/tome_mcp.egg-info/SOURCES.txt'
2026-02-16T22:08:23,293   adding license file 'LICENSE'
2026-02-16T22:08:23,299   writing manifest file 'src/tome_mcp.egg-info/SOURCES.txt'
2026-02-16T22:08:23,305   copying src/tome/py.typed -> build/lib/tome
2026-02-16T22:08:23,307   creating build/lib/tome/docs
2026-02-16T22:08:23,308   copying src/tome/docs/configuration.md -> build/lib/tome/docs
2026-02-16T22:08:23,310   copying src/tome/docs/directory-layout.md -> build/lib/tome/docs
2026-02-16T22:08:23,313   copying src/tome/docs/document-analysis.md -> build/lib/tome/docs
2026-02-16T22:08:23,315   copying src/tome/docs/exploration.md -> build/lib/tome/docs
2026-02-16T22:08:23,318   copying src/tome/docs/getting-started.md -> build/lib/tome/docs
2026-02-16T22:08:23,320   copying src/tome/docs/needful.md -> build/lib/tome/docs
2026-02-16T22:08:23,322   copying src/tome/docs/notes.md -> build/lib/tome/docs
2026-02-16T22:08:23,324   copying src/tome/docs/paper-workflow.md -> build/lib/tome/docs
2026-02-16T22:08:23,327   copying src/tome/docs/reporting-issues.md -> build/lib/tome/docs
2026-02-16T22:08:23,329   copying src/tome/docs/review-cycle.md -> build/lib/tome/docs
2026-02-16T22:08:23,331   copying src/tome/docs/search.md -> build/lib/tome/docs
2026-02-16T22:08:23,346   installing to build/bdist.linux-armv7l/wheel
2026-02-16T22:08:23,347   running install
2026-02-16T22:08:23,370   running install_lib
2026-02-16T22:08:23,377   creating build/bdist.linux-armv7l/wheel
2026-02-16T22:08:23,379   creating build/bdist.linux-armv7l/wheel/tome
2026-02-16T22:08:23,381   copying build/lib/tome/extract.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:08:23,383   copying build/lib/tome/needful.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:08:23,386   copying build/lib/tome/manifest.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:08:23,388   copying build/lib/tome/slug.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:08:23,390   copying build/lib/tome/git_diff.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:08:23,392   copying build/lib/tome/http.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:08:23,394   copying build/lib/tome/rejected_dois.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:08:23,396   copying build/lib/tome/grep_raw.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:08:23,398   copying build/lib/tome/filelock.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:08:23,400   copying build/lib/tome/server.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:08:23,405   copying build/lib/tome/paths.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:08:23,407   copying build/lib/tome/__main__.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:08:23,408   copying build/lib/tome/figures.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:08:23,411   copying build/lib/tome/openalex.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:08:23,413   copying build/lib/tome/find_text.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:08:23,415   copying build/lib/tome/checksum.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:08:23,417   copying build/lib/tome/crossref.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:08:23,419   copying build/lib/tome/bib.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:08:23,422   copying build/lib/tome/semantic_scholar.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:08:23,424   copying build/lib/tome/identify.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:08:23,426   copying build/lib/tome/py.typed -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:08:23,428   copying build/lib/tome/errors.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:08:23,431   copying build/lib/tome/guide.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:08:23,433   copying build/lib/tome/ingest.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:08:23,435   copying build/lib/tome/__init__.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:08:23,437   copying build/lib/tome/call_log.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:08:23,439   copying build/lib/tome/file_meta.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:08:23,441   copying build/lib/tome/config.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:08:23,443   copying build/lib/tome/summaries.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:08:23,446   copying build/lib/tome/s2ag_cli.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:08:23,448   copying build/lib/tome/latex.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:08:23,450   copying build/lib/tome/index.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:08:23,453   copying build/lib/tome/validate_vault.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:08:23,455   copying build/lib/tome/toc.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:08:23,458   copying build/lib/tome/s2ag.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:08:23,461   copying build/lib/tome/unpaywall.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:08:23,463   copying build/lib/tome/notes.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:08:23,465   copying build/lib/tome/chunk.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:08:23,467   copying build/lib/tome/cite_tree.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:08:23,469   copying build/lib/tome/analysis.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:08:23,472   copying build/lib/tome/store.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:08:23,474   copying build/lib/tome/validate.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:08:23,476   copying build/lib/tome/vault.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:08:23,479   creating build/bdist.linux-armv7l/wheel/tome/docs
2026-02-16T22:08:23,480   copying build/lib/tome/docs/search.md -> build/bdist.linux-armv7l/wheel/./tome/docs
2026-02-16T22:08:23,482   copying build/lib/tome/docs/notes.md -> build/bdist.linux-armv7l/wheel/./tome/docs
2026-02-16T22:08:23,484   copying build/lib/tome/docs/getting-started.md -> build/bdist.linux-armv7l/wheel/./tome/docs
2026-02-16T22:08:23,486   copying build/lib/tome/docs/configuration.md -> build/bdist.linux-armv7l/wheel/./tome/docs
2026-02-16T22:08:23,488   copying build/lib/tome/docs/document-analysis.md -> build/bdist.linux-armv7l/wheel/./tome/docs
2026-02-16T22:08:23,490   copying build/lib/tome/docs/paper-workflow.md -> build/bdist.linux-armv7l/wheel/./tome/docs
2026-02-16T22:08:23,492   copying build/lib/tome/docs/reporting-issues.md -> build/bdist.linux-armv7l/wheel/./tome/docs
2026-02-16T22:08:23,494   copying build/lib/tome/docs/exploration.md -> build/bdist.linux-armv7l/wheel/./tome/docs
2026-02-16T22:08:23,496   copying build/lib/tome/docs/review-cycle.md -> build/bdist.linux-armv7l/wheel/./tome/docs
2026-02-16T22:08:23,498   copying build/lib/tome/docs/directory-layout.md -> build/bdist.linux-armv7l/wheel/./tome/docs
2026-02-16T22:08:23,499   copying build/lib/tome/docs/needful.md -> build/bdist.linux-armv7l/wheel/./tome/docs
2026-02-16T22:08:23,501   copying build/lib/tome/issues.py -> build/bdist.linux-armv7l/wheel/./tome
2026-02-16T22:08:23,504   running install_egg_info
2026-02-16T22:08:23,510   Copying src/tome_mcp.egg-info to build/bdist.linux-armv7l/wheel/./tome_mcp-0.5.0-py3.11.egg-info
2026-02-16T22:08:23,522   running install_scripts
2026-02-16T22:08:23,536   creating build/bdist.linux-armv7l/wheel/tome_mcp-0.5.0.dist-info/WHEEL
2026-02-16T22:08:23,539   creating '/tmp/pip-wheel-v_8j_2bb/.tmp-iwpe6rze/tome_mcp-0.5.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2026-02-16T22:08:23,541   adding 'tome/__init__.py'
2026-02-16T22:08:23,543   adding 'tome/__main__.py'
2026-02-16T22:08:23,546   adding 'tome/analysis.py'
2026-02-16T22:08:23,548   adding 'tome/bib.py'
2026-02-16T22:08:23,549   adding 'tome/call_log.py'
2026-02-16T22:08:23,551   adding 'tome/checksum.py'
2026-02-16T22:08:23,552   adding 'tome/chunk.py'
2026-02-16T22:08:23,555   adding 'tome/cite_tree.py'
2026-02-16T22:08:23,557   adding 'tome/config.py'
2026-02-16T22:08:23,558   adding 'tome/crossref.py'
2026-02-16T22:08:23,560   adding 'tome/errors.py'
2026-02-16T22:08:23,563   adding 'tome/extract.py'
2026-02-16T22:08:23,565   adding 'tome/figures.py'
2026-02-16T22:08:23,566   adding 'tome/file_meta.py'
2026-02-16T22:08:23,568   adding 'tome/filelock.py'
2026-02-16T22:08:23,570   adding 'tome/find_text.py'
2026-02-16T22:08:23,572   adding 'tome/git_diff.py'
2026-02-16T22:08:23,574   adding 'tome/grep_raw.py'
2026-02-16T22:08:23,576   adding 'tome/guide.py'
2026-02-16T22:08:23,577   adding 'tome/http.py'
2026-02-16T22:08:23,578   adding 'tome/identify.py'
2026-02-16T22:08:23,580   adding 'tome/index.py'
2026-02-16T22:08:23,582   adding 'tome/ingest.py'
2026-02-16T22:08:23,584   adding 'tome/issues.py'
2026-02-16T22:08:23,585   adding 'tome/latex.py'
2026-02-16T22:08:23,587   adding 'tome/manifest.py'
2026-02-16T22:08:23,588   adding 'tome/needful.py'
2026-02-16T22:08:23,590   adding 'tome/notes.py'
2026-02-16T22:08:23,591   adding 'tome/openalex.py'
2026-02-16T22:08:23,592   adding 'tome/paths.py'
2026-02-16T22:08:23,593   adding 'tome/py.typed'
2026-02-16T22:08:23,595   adding 'tome/rejected_dois.py'
2026-02-16T22:08:23,598   adding 'tome/s2ag.py'
2026-02-16T22:08:23,600   adding 'tome/s2ag_cli.py'
2026-02-16T22:08:23,602   adding 'tome/semantic_scholar.py'
2026-02-16T22:08:23,621   adding 'tome/server.py'
2026-02-16T22:08:23,624   adding 'tome/slug.py'
2026-02-16T22:08:23,626   adding 'tome/store.py'
2026-02-16T22:08:23,627   adding 'tome/summaries.py'
2026-02-16T22:08:23,631   adding 'tome/toc.py'
2026-02-16T22:08:23,632   adding 'tome/unpaywall.py'
2026-02-16T22:08:23,634   adding 'tome/validate.py'
2026-02-16T22:08:23,636   adding 'tome/validate_vault.py'
2026-02-16T22:08:23,640   adding 'tome/vault.py'
2026-02-16T22:08:23,642   adding 'tome/docs/configuration.md'
2026-02-16T22:08:23,643   adding 'tome/docs/directory-layout.md'
2026-02-16T22:08:23,645   adding 'tome/docs/document-analysis.md'
2026-02-16T22:08:23,646   adding 'tome/docs/exploration.md'
2026-02-16T22:08:23,647   adding 'tome/docs/getting-started.md'
2026-02-16T22:08:23,649   adding 'tome/docs/needful.md'
2026-02-16T22:08:23,650   adding 'tome/docs/notes.md'
2026-02-16T22:08:23,651   adding 'tome/docs/paper-workflow.md'
2026-02-16T22:08:23,653   adding 'tome/docs/reporting-issues.md'
2026-02-16T22:08:23,654   adding 'tome/docs/review-cycle.md'
2026-02-16T22:08:23,655   adding 'tome/docs/search.md'
2026-02-16T22:08:23,663   adding 'tome_mcp-0.5.0.dist-info/licenses/LICENSE'
2026-02-16T22:08:23,666   adding 'tome_mcp-0.5.0.dist-info/METADATA'
2026-02-16T22:08:23,668   adding 'tome_mcp-0.5.0.dist-info/WHEEL'
2026-02-16T22:08:23,669   adding 'tome_mcp-0.5.0.dist-info/entry_points.txt'
2026-02-16T22:08:23,669   adding 'tome_mcp-0.5.0.dist-info/top_level.txt'
2026-02-16T22:08:23,671   adding 'tome_mcp-0.5.0.dist-info/RECORD'
2026-02-16T22:08:23,675   removing build/bdist.linux-armv7l/wheel
2026-02-16T22:08:23,792   Building wheel for tome-mcp (pyproject.toml): finished with status 'done'
2026-02-16T22:08:23,802   Created wheel for tome-mcp: filename=tome_mcp-0.5.0-py3-none-any.whl size=193498 sha256=7334bbbfad503ce6a381fc5f0032c5a6bbf107778a28ff46f6974207a5b89f31
2026-02-16T22:08:23,803   Stored in directory: /tmp/pip-ephem-wheel-cache-c4pyfxsc/wheels/58/98/e1/122f90d6426f8a6c85508f49a76789d9e4c0d8cf3012dfc104
2026-02-16T22:08:23,821 Successfully built tome-mcp
2026-02-16T22:08:23,831 Removed build tracker: '/tmp/pip-build-tracker-ur1wu91s'