2026-02-28T11:53:41,909 Created temporary directory: /tmp/pip-ephem-wheel-cache-uhfn0ufy
2026-02-28T11:53:41,911 Created temporary directory: /tmp/pip-build-tracker-cv1rhld_
2026-02-28T11:53:41,912 Initialized build tracking at /tmp/pip-build-tracker-cv1rhld_
2026-02-28T11:53:41,912 Created build tracker: /tmp/pip-build-tracker-cv1rhld_
2026-02-28T11:53:41,912 Entered build tracker: /tmp/pip-build-tracker-cv1rhld_
2026-02-28T11:53:41,913 Created temporary directory: /tmp/pip-wheel-bketpnp5
2026-02-28T11:53:41,916 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-02-28T11:53:41,918 Created temporary directory: /tmp/pip-ephem-wheel-cache-2t5aadoo
2026-02-28T11:53:41,942 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-02-28T11:53:41,946 2 location(s) to search for versions of nrpcalc:
2026-02-28T11:53:41,946 * https://pypi.org/simple/nrpcalc/
2026-02-28T11:53:41,946 * https://www.piwheels.org/simple/nrpcalc/
2026-02-28T11:53:41,947 Fetching project page and analyzing links: https://pypi.org/simple/nrpcalc/
2026-02-28T11:53:41,947 Getting page https://pypi.org/simple/nrpcalc/
2026-02-28T11:53:41,949 Found index url https://pypi.org/simple
2026-02-28T11:53:42,167 Fetched page https://pypi.org/simple/nrpcalc/ as application/vnd.pypi.simple.v1+json
2026-02-28T11:53:42,170   Link requires a different Python (3.11.2 not in: '>=2.7, <3.0.*'): https://files.pythonhosted.org/packages/c5/a4/6a403b7588caa3094914c8e28a35b4a6cbd2e343b95e6b7a1f87efefc221/nrpcalc-1.1.22.tar.gz (from https://pypi.org/simple/nrpcalc/) (requires-python:>=2.7, <3.0.*)
2026-02-28T11:53:42,170   Skipping link: 1.1.22 Requires-Python >=2.7, <3.0.*: https://files.pythonhosted.org/packages/c5/a4/6a403b7588caa3094914c8e28a35b4a6cbd2e343b95e6b7a1f87efefc221/nrpcalc-1.1.22.tar.gz (from https://pypi.org/simple/nrpcalc/) (requires-python:>=2.7, <3.0.*)
2026-02-28T11:53:42,171   Skipping link: No binaries permitted for nrpcalc: https://files.pythonhosted.org/packages/50/45/58c3f2e35784ce8268fd81ced9239b2decd32599b633d1a255f170d407be/nrpcalc-1.6.3-py3-none-any.whl (from https://pypi.org/simple/nrpcalc/) (requires-python:!=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*, >=3.6.*, <4.0.*)
2026-02-28T11:53:42,173   Found link https://files.pythonhosted.org/packages/85/a6/ff15f61f62b64717d5e76f75634a3aa0aa252c64ea88c3a286f28c12ae29/nrpcalc-1.6.3.tar.gz (from https://pypi.org/simple/nrpcalc/) (requires-python:!=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*, >=3.6.*, <4.0.*), version: 1.6.3
2026-02-28T11:53:42,174   Skipping link: No binaries permitted for nrpcalc: https://files.pythonhosted.org/packages/e4/25/b062ff19f75a509534714c7f88627fdf9be7bebe50da9be7acd1c1a385f7/nrpcalc-1.7.5-py3-none-any.whl (from https://pypi.org/simple/nrpcalc/) (requires-python:<4,>=3.6)
2026-02-28T11:53:42,175   Found link https://files.pythonhosted.org/packages/fc/65/75e4b638eef347bb8bdd59fee2f2f1dd32ec60614edbd03b1ebc2122a696/nrpcalc-1.7.5.tar.gz (from https://pypi.org/simple/nrpcalc/) (requires-python:<4,>=3.6), version: 1.7.5
2026-02-28T11:53:42,175   Skipping link: No binaries permitted for nrpcalc: https://files.pythonhosted.org/packages/86/81/dbc7556359fc74e9a2004fbe70b29a38b00c0a2b03701f63f0f5d1b3b2d8/nrpcalc-1.7.6-py3-none-any.whl (from https://pypi.org/simple/nrpcalc/) (requires-python:<4,>=3.8)
2026-02-28T11:53:42,176   Found link https://files.pythonhosted.org/packages/07/9e/618cd0539d897660a956228922279f985ebe448f383e1c6f5ea6623d7f74/nrpcalc-1.7.6.tar.gz (from https://pypi.org/simple/nrpcalc/) (requires-python:<4,>=3.8), version: 1.7.6
2026-02-28T11:53:42,177 Fetching project page and analyzing links: https://www.piwheels.org/simple/nrpcalc/
2026-02-28T11:53:42,178 Getting page https://www.piwheels.org/simple/nrpcalc/
2026-02-28T11:53:42,179 Found index url https://www.piwheels.org/simple
2026-02-28T11:53:42,336 Fetched page https://www.piwheels.org/simple/nrpcalc/ as text/html
2026-02-28T11:53:42,338   Skipping link: No binaries permitted for nrpcalc: https://archive1.piwheels.org/simple/nrpcalc/nrpcalc-1.7.5-py3-none-any.whl#sha256=48ea422a5d37806a169b97581aacbdde0e6b5a0997f5a91b6956693f863ab7b2 (from https://www.piwheels.org/simple/nrpcalc/) (requires-python:>=3.6, <4)
2026-02-28T11:53:42,338   Skipping link: No binaries permitted for nrpcalc: https://archive1.piwheels.org/simple/nrpcalc/nrpcalc-1.6.3-py3-none-any.whl#sha256=b69cdacb7dba482616d9c5a2963647b955045ee74695b04296c7b9ee6cfd10ce (from https://www.piwheels.org/simple/nrpcalc/) (requires-python:!=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*, >=3.6.*, <4.0.*)
2026-02-28T11:53:42,339 Skipping link: not a file: https://www.piwheels.org/simple/nrpcalc/
2026-02-28T11:53:42,339 Skipping link: not a file: https://pypi.org/simple/nrpcalc/
2026-02-28T11:53:42,360 Given no hashes to check 1 links for project 'nrpcalc': discarding no candidates
2026-02-28T11:53:42,380 Collecting nrpcalc==1.7.6
2026-02-28T11:53:42,382   Created temporary directory: /tmp/pip-unpack-wb6nn5gy
2026-02-28T11:53:42,516   Downloading nrpcalc-1.7.6.tar.gz (43 kB)
2026-02-28T11:53:42,621   Added nrpcalc==1.7.6 from https://files.pythonhosted.org/packages/07/9e/618cd0539d897660a956228922279f985ebe448f383e1c6f5ea6623d7f74/nrpcalc-1.7.6.tar.gz to build tracker '/tmp/pip-build-tracker-cv1rhld_'
2026-02-28T11:53:42,626   Created temporary directory: /tmp/pip-build-env-b0u52jzd
2026-02-28T11:53:42,631   Installing build dependencies: started
2026-02-28T11:53:42,632   Running command pip subprocess to install build dependencies
2026-02-28T11:53:42,663   Error processing line 1 of /home/piwheels/.local/lib/python3.11/site-packages/cntimer.pth:

2026-02-28T11:53:42,703     Traceback (most recent call last):
2026-02-28T11:53:42,704       File "<frozen site>", line 192, in addpackage
2026-02-28T11:53:42,704       File "<string>", line 1, in <module>
2026-02-28T11:53:42,705     ModuleNotFoundError: No module named 'cntimer'

2026-02-28T11:53:42,706   Remainder of file ignored
2026-02-28T11:53:43,804   Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11)
2026-02-28T11:53:44,380   DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2026-02-28T11:53:44,405   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2026-02-28T11:53:46,134   Collecting setuptools>=61
2026-02-28T11:53:46,239     Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.0-py3-none-any.whl (1.0 MB)
2026-02-28T11:53:46,513   Collecting wheel
2026-02-28T11:53:46,528     Using cached https://www.piwheels.org/simple/wheel/wheel-0.46.3-py3-none-any.whl (30 kB)
2026-02-28T11:53:46,714   Collecting packaging>=24.0
2026-02-28T11:53:46,729     Using cached https://www.piwheels.org/simple/packaging/packaging-26.0-py3-none-any.whl (74 kB)
2026-02-28T11:53:50,207   Installing collected packages: setuptools, packaging, wheel
2026-02-28T11:53:53,522     Creating /tmp/pip-build-env-b0u52jzd/overlay/local/bin
2026-02-28T11:53:53,524     changing mode of /tmp/pip-build-env-b0u52jzd/overlay/local/bin/wheel to 755
2026-02-28T11:53:53,545   Successfully installed packaging-26.0 setuptools-82.0.0 wheel-0.46.3
2026-02-28T11:53:53,825   Installing build dependencies: finished with status 'done'
2026-02-28T11:53:53,832   Getting requirements to build wheel: started
2026-02-28T11:53:53,833   Running command Getting requirements to build wheel
2026-02-28T11:53:54,531   running egg_info
2026-02-28T11:53:54,536   writing nrpcalc.egg-info/PKG-INFO
2026-02-28T11:53:54,541   writing dependency_links to nrpcalc.egg-info/dependency_links.txt
2026-02-28T11:53:54,543   writing requirements to nrpcalc.egg-info/requires.txt
2026-02-28T11:53:54,544   writing top-level names to nrpcalc.egg-info/top_level.txt
2026-02-28T11:53:54,564   reading manifest file 'nrpcalc.egg-info/SOURCES.txt'
2026-02-28T11:53:54,567   adding license file 'LICENSE'
2026-02-28T11:53:54,570   writing manifest file 'nrpcalc.egg-info/SOURCES.txt'
2026-02-28T11:53:54,667   Getting requirements to build wheel: finished with status 'done'
2026-02-28T11:53:54,670   Created temporary directory: /tmp/pip-modern-metadata-aaibbkeg
2026-02-28T11:53:54,673   Preparing metadata (pyproject.toml): started
2026-02-28T11:53:54,674   Running command Preparing metadata (pyproject.toml)
2026-02-28T11:53:55,365   running dist_info
2026-02-28T11:53:55,375   creating /tmp/pip-modern-metadata-aaibbkeg/nrpcalc.egg-info
2026-02-28T11:53:55,377   writing /tmp/pip-modern-metadata-aaibbkeg/nrpcalc.egg-info/PKG-INFO
2026-02-28T11:53:55,381   writing dependency_links to /tmp/pip-modern-metadata-aaibbkeg/nrpcalc.egg-info/dependency_links.txt
2026-02-28T11:53:55,383   writing requirements to /tmp/pip-modern-metadata-aaibbkeg/nrpcalc.egg-info/requires.txt
2026-02-28T11:53:55,384   writing top-level names to /tmp/pip-modern-metadata-aaibbkeg/nrpcalc.egg-info/top_level.txt
2026-02-28T11:53:55,386   writing manifest file '/tmp/pip-modern-metadata-aaibbkeg/nrpcalc.egg-info/SOURCES.txt'
2026-02-28T11:53:55,404   reading manifest file '/tmp/pip-modern-metadata-aaibbkeg/nrpcalc.egg-info/SOURCES.txt'
2026-02-28T11:53:55,406   adding license file 'LICENSE'
2026-02-28T11:53:55,409   writing manifest file '/tmp/pip-modern-metadata-aaibbkeg/nrpcalc.egg-info/SOURCES.txt'
2026-02-28T11:53:55,410   creating '/tmp/pip-modern-metadata-aaibbkeg/nrpcalc-1.7.6.dist-info'
2026-02-28T11:53:55,534   Preparing metadata (pyproject.toml): finished with status 'done'
2026-02-28T11:53:55,539   Source in /tmp/pip-wheel-bketpnp5/nrpcalc_9bc3aba377f94a4f86d026255d6daf2c has version 1.7.6, which satisfies requirement nrpcalc==1.7.6 from https://files.pythonhosted.org/packages/07/9e/618cd0539d897660a956228922279f985ebe448f383e1c6f5ea6623d7f74/nrpcalc-1.7.6.tar.gz
2026-02-28T11:53:55,540   Removed nrpcalc==1.7.6 from https://files.pythonhosted.org/packages/07/9e/618cd0539d897660a956228922279f985ebe448f383e1c6f5ea6623d7f74/nrpcalc-1.7.6.tar.gz from build tracker '/tmp/pip-build-tracker-cv1rhld_'
2026-02-28T11:53:55,547 Created temporary directory: /tmp/pip-unpack-psq88ru1
2026-02-28T11:53:55,548 Building wheels for collected packages: nrpcalc
2026-02-28T11:53:55,553   Created temporary directory: /tmp/pip-wheel-nkubuk1v
2026-02-28T11:53:55,553   Destination directory: /tmp/pip-wheel-nkubuk1v
2026-02-28T11:53:55,556   Building wheel for nrpcalc (pyproject.toml): started
2026-02-28T11:53:55,557   Running command Building wheel for nrpcalc (pyproject.toml)
2026-02-28T11:53:56,190   running bdist_wheel
2026-02-28T11:53:56,208   running build
2026-02-28T11:53:56,208   running build_py
2026-02-28T11:53:56,214   creating build/lib/nrpcalc
2026-02-28T11:53:56,217   copying nrpcalc/__init__.py -> build/lib/nrpcalc
2026-02-28T11:53:56,219   copying nrpcalc/nrpcalc.py -> build/lib/nrpcalc
2026-02-28T11:53:56,222   creating build/lib/nrpcalc/base
2026-02-28T11:53:56,223   copying nrpcalc/base/kmerSetArray.py -> build/lib/nrpcalc/base
2026-02-28T11:53:56,225   copying nrpcalc/base/projector.py -> build/lib/nrpcalc/base
2026-02-28T11:53:56,228   copying nrpcalc/base/berno.py -> build/lib/nrpcalc/base
2026-02-28T11:53:56,230   copying nrpcalc/base/__init__.py -> build/lib/nrpcalc/base
2026-02-28T11:53:56,231   copying nrpcalc/base/maker.py -> build/lib/nrpcalc/base
2026-02-28T11:53:56,234   copying nrpcalc/base/synthesis.py -> build/lib/nrpcalc/base
2026-02-28T11:53:56,237   copying nrpcalc/base/hgraph.py -> build/lib/nrpcalc/base
2026-02-28T11:53:56,240   copying nrpcalc/base/vercov.py -> build/lib/nrpcalc/base
2026-02-28T11:53:56,243   copying nrpcalc/base/makerchecks.py -> build/lib/nrpcalc/base
2026-02-28T11:53:56,245   copying nrpcalc/base/recovery.py -> build/lib/nrpcalc/base
2026-02-28T11:53:56,248   copying nrpcalc/base/finder.py -> build/lib/nrpcalc/base
2026-02-28T11:53:56,250   copying nrpcalc/base/kmerSetDB.py -> build/lib/nrpcalc/base
2026-02-28T11:53:56,253   copying nrpcalc/base/utils.py -> build/lib/nrpcalc/base
2026-02-28T11:53:56,255   running egg_info
2026-02-28T11:53:56,265   writing nrpcalc.egg-info/PKG-INFO
2026-02-28T11:53:56,268   writing dependency_links to nrpcalc.egg-info/dependency_links.txt
2026-02-28T11:53:56,270   writing requirements to nrpcalc.egg-info/requires.txt
2026-02-28T11:53:56,271   writing top-level names to nrpcalc.egg-info/top_level.txt
2026-02-28T11:53:56,281   reading manifest file 'nrpcalc.egg-info/SOURCES.txt'
2026-02-28T11:53:56,285   adding license file 'LICENSE'
2026-02-28T11:53:56,289   writing manifest file 'nrpcalc.egg-info/SOURCES.txt'
2026-02-28T11:53:56,302   installing to build/bdist.linux-armv7l/wheel
2026-02-28T11:53:56,303   running install
2026-02-28T11:53:56,327   running install_lib
2026-02-28T11:53:56,334   creating build/bdist.linux-armv7l/wheel
2026-02-28T11:53:56,336   creating build/bdist.linux-armv7l/wheel/nrpcalc
2026-02-28T11:53:56,338   copying build/lib/nrpcalc/__init__.py -> build/bdist.linux-armv7l/wheel/./nrpcalc
2026-02-28T11:53:56,341   creating build/bdist.linux-armv7l/wheel/nrpcalc/base
2026-02-28T11:53:56,342   copying build/lib/nrpcalc/base/kmerSetArray.py -> build/bdist.linux-armv7l/wheel/./nrpcalc/base
2026-02-28T11:53:56,344   copying build/lib/nrpcalc/base/projector.py -> build/bdist.linux-armv7l/wheel/./nrpcalc/base
2026-02-28T11:53:56,346   copying build/lib/nrpcalc/base/berno.py -> build/bdist.linux-armv7l/wheel/./nrpcalc/base
2026-02-28T11:53:56,349   copying build/lib/nrpcalc/base/__init__.py -> build/bdist.linux-armv7l/wheel/./nrpcalc/base
2026-02-28T11:53:56,350   copying build/lib/nrpcalc/base/maker.py -> build/bdist.linux-armv7l/wheel/./nrpcalc/base
2026-02-28T11:53:56,356   copying build/lib/nrpcalc/base/synthesis.py -> build/bdist.linux-armv7l/wheel/./nrpcalc/base
2026-02-28T11:53:56,579   copying build/lib/nrpcalc/base/hgraph.py -> build/bdist.linux-armv7l/wheel/./nrpcalc/base
2026-02-28T11:53:56,581   copying build/lib/nrpcalc/base/vercov.py -> build/bdist.linux-armv7l/wheel/./nrpcalc/base
2026-02-28T11:53:56,584   copying build/lib/nrpcalc/base/makerchecks.py -> build/bdist.linux-armv7l/wheel/./nrpcalc/base
2026-02-28T11:53:56,586   copying build/lib/nrpcalc/base/recovery.py -> build/bdist.linux-armv7l/wheel/./nrpcalc/base
2026-02-28T11:53:56,588   copying build/lib/nrpcalc/base/finder.py -> build/bdist.linux-armv7l/wheel/./nrpcalc/base
2026-02-28T11:53:56,591   copying build/lib/nrpcalc/base/kmerSetDB.py -> build/bdist.linux-armv7l/wheel/./nrpcalc/base
2026-02-28T11:53:56,593   copying build/lib/nrpcalc/base/utils.py -> build/bdist.linux-armv7l/wheel/./nrpcalc/base
2026-02-28T11:53:56,596   copying build/lib/nrpcalc/nrpcalc.py -> build/bdist.linux-armv7l/wheel/./nrpcalc
2026-02-28T11:53:56,598   running install_egg_info
2026-02-28T11:53:56,603   Copying nrpcalc.egg-info to build/bdist.linux-armv7l/wheel/./nrpcalc-1.7.6-py3.11.egg-info
2026-02-28T11:53:56,615   running install_scripts
2026-02-28T11:53:56,627   creating build/bdist.linux-armv7l/wheel/nrpcalc-1.7.6.dist-info/WHEEL
2026-02-28T11:53:56,630   creating '/tmp/pip-wheel-nkubuk1v/.tmp-mi9dcfeq/nrpcalc-1.7.6-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2026-02-28T11:53:56,632   adding 'nrpcalc/__init__.py'
2026-02-28T11:53:56,635   adding 'nrpcalc/nrpcalc.py'
2026-02-28T11:53:56,638   adding 'nrpcalc/base/__init__.py'
2026-02-28T11:53:56,639   adding 'nrpcalc/base/berno.py'
2026-02-28T11:53:56,641   adding 'nrpcalc/base/finder.py'
2026-02-28T11:53:56,642   adding 'nrpcalc/base/hgraph.py'
2026-02-28T11:53:56,644   adding 'nrpcalc/base/kmerSetArray.py'
2026-02-28T11:53:56,646   adding 'nrpcalc/base/kmerSetDB.py'
2026-02-28T11:53:56,652   adding 'nrpcalc/base/maker.py'
2026-02-28T11:53:56,654   adding 'nrpcalc/base/makerchecks.py'
2026-02-28T11:53:56,655   adding 'nrpcalc/base/projector.py'
2026-02-28T11:53:56,657   adding 'nrpcalc/base/recovery.py'
2026-02-28T11:53:56,659   adding 'nrpcalc/base/synthesis.py'
2026-02-28T11:53:56,660   adding 'nrpcalc/base/utils.py'
2026-02-28T11:53:56,662   adding 'nrpcalc/base/vercov.py'
2026-02-28T11:53:56,665   adding 'nrpcalc-1.7.6.dist-info/licenses/LICENSE'
2026-02-28T11:53:56,667   adding 'nrpcalc-1.7.6.dist-info/METADATA'
2026-02-28T11:53:56,668   adding 'nrpcalc-1.7.6.dist-info/WHEEL'
2026-02-28T11:53:56,669   adding 'nrpcalc-1.7.6.dist-info/top_level.txt'
2026-02-28T11:53:56,670   adding 'nrpcalc-1.7.6.dist-info/RECORD'
2026-02-28T11:53:56,672   removing build/bdist.linux-armv7l/wheel
2026-02-28T11:53:56,776   Building wheel for nrpcalc (pyproject.toml): finished with status 'done'
2026-02-28T11:53:56,782   Created wheel for nrpcalc: filename=nrpcalc-1.7.6-py3-none-any.whl size=42906 sha256=0c034c9984435a967db1973dfc313002f9f828d101c3bf89a9782b4e34689b6d
2026-02-28T11:53:56,783   Stored in directory: /tmp/pip-ephem-wheel-cache-2t5aadoo/wheels/bf/ed/b1/8efc68919b1cae1db60ec41d923791036a8b3b7bb9146abe41
2026-02-28T11:53:56,796 Successfully built nrpcalc
2026-02-28T11:53:56,800 Removed build tracker: '/tmp/pip-build-tracker-cv1rhld_'