2026-03-02T15:13:53,544 Created temporary directory: /tmp/pip-ephem-wheel-cache-lkftee5e 2026-03-02T15:13:53,546 Created temporary directory: /tmp/pip-build-tracker-plf45rxa 2026-03-02T15:13:53,547 Initialized build tracking at /tmp/pip-build-tracker-plf45rxa 2026-03-02T15:13:53,547 Created build tracker: /tmp/pip-build-tracker-plf45rxa 2026-03-02T15:13:53,548 Entered build tracker: /tmp/pip-build-tracker-plf45rxa 2026-03-02T15:13:53,549 Created temporary directory: /tmp/pip-wheel-hefu8uqo 2026-03-02T15:13:53,552 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-03-02T15:13:53,554 Created temporary directory: /tmp/pip-ephem-wheel-cache-05yav68s 2026-03-02T15:13:53,579 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-03-02T15:13:53,583 2 location(s) to search for versions of pytom-match-pick: 2026-03-02T15:13:53,583 * https://pypi.org/simple/pytom-match-pick/ 2026-03-02T15:13:53,583 * https://www.piwheels.org/simple/pytom-match-pick/ 2026-03-02T15:13:53,584 Fetching project page and analyzing links: https://pypi.org/simple/pytom-match-pick/ 2026-03-02T15:13:53,584 Getting page https://pypi.org/simple/pytom-match-pick/ 2026-03-02T15:13:53,586 Found index url https://pypi.org/simple 2026-03-02T15:13:53,812 Fetched page https://pypi.org/simple/pytom-match-pick/ as application/vnd.pypi.simple.v1+json 2026-03-02T15:13:53,820 Found link 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https://files.pythonhosted.org/packages/77/6b/be3e904b90ef18f7d278bf93f342204825ebf626297fff0120b90c285def/pytom_match_pick-0.5.0-py3-none-any.whl (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.9) 2026-03-02T15:13:53,824 Found link https://files.pythonhosted.org/packages/27/c2/bf63df003e0bc960ae914788abdbfdc50b7f801dbe0bebb1236e0fd2a71c/pytom-match-pick-0.6.0.tar.gz (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.9), version: 0.6.0 2026-03-02T15:13:53,824 Skipping link: No binaries permitted for pytom-match-pick: https://files.pythonhosted.org/packages/cd/a4/9d13299f41e923277c5261898b88f793393f75e512d58509fc185a824828/pytom_match_pick-0.6.0-py3-none-any.whl (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.9) 2026-03-02T15:13:53,825 Skipping link: No binaries permitted for pytom-match-pick: https://files.pythonhosted.org/packages/b3/14/7cf120f1678587bde0a854121312a9d4ca1eec5def50edff56eefeff2d42/pytom_match_pick-0.7.0-py3-none-any.whl (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.9) 2026-03-02T15:13:53,826 Found link https://files.pythonhosted.org/packages/0d/13/75f2a190e7434d5cc1b193139ed4e818a81d7a68b1388da188b248e0aa58/pytom_match_pick-0.7.0.tar.gz (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.9), version: 0.7.0 2026-03-02T15:13:53,827 Skipping link: No binaries permitted for pytom-match-pick: https://files.pythonhosted.org/packages/47/41/02ad9fdfbf3dfeb1530031e448fba60b28c13f15aa5663a138c138f8bac2/pytom_match_pick-0.7.1-py3-none-any.whl (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.9) 2026-03-02T15:13:53,828 Found link https://files.pythonhosted.org/packages/0d/a4/250695551905248a2ce2bf7a76cd69bfbe2ed80fee05e62ab13b5de941bd/pytom_match_pick-0.7.1.tar.gz (from 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https://files.pythonhosted.org/packages/dc/22/f37ede1560078567bab299973ffdb47dca195964f00bf51d738171580f90/pytom_match_pick-0.7.8.tar.gz (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.10), version: 0.7.8 2026-03-02T15:13:53,832 Skipping link: No binaries permitted for pytom-match-pick: https://files.pythonhosted.org/packages/7d/2c/ba4cf9c7d54dfa35619f9e69502ac6254cbd222089e0ca2168327ef5a0bd/pytom_match_pick-0.7.9-py3-none-any.whl (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.10) 2026-03-02T15:13:53,833 Found link https://files.pythonhosted.org/packages/c4/be/0c5d387b4a3abf34944d46e033e4e989e7dc337570738822d3520ff21379/pytom_match_pick-0.7.9.tar.gz (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.10), version: 0.7.9 2026-03-02T15:13:53,833 Skipping link: No binaries permitted for pytom-match-pick: https://files.pythonhosted.org/packages/93/1b/b42104dde349464c6e9fa413a3694aff98e957d782184d75c3eeb2f0a66f/pytom_match_pick-0.7.10-py3-none-any.whl (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.10) 2026-03-02T15:13:53,834 Found link https://files.pythonhosted.org/packages/29/65/a35d7764ed9f9605592005751dd1c7749f815f3f009c71c59eaac9a5f409/pytom_match_pick-0.7.10.tar.gz (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.10), version: 0.7.10 2026-03-02T15:13:53,835 Skipping link: No binaries permitted for pytom-match-pick: https://files.pythonhosted.org/packages/69/22/3c32fb46f689ee65dc64fc1eb9f39d14b28785224236ff758857a9ef1806/pytom_match_pick-0.7.11-py3-none-any.whl (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.10) 2026-03-02T15:13:53,836 Found link https://files.pythonhosted.org/packages/2e/f2/b23ed374e4256b1cabad9a5914bf5e4fdca8d0a3a7431867cda12b897621/pytom_match_pick-0.7.11.tar.gz (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.10), version: 0.7.11 2026-03-02T15:13:53,837 Skipping link: No binaries permitted for pytom-match-pick: https://files.pythonhosted.org/packages/7e/d5/adec8d12669829ef37648569d5f6997a2ea3ab1ff3e525bf7fe83b291cee/pytom_match_pick-0.8.0-py3-none-any.whl (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.10) 2026-03-02T15:13:53,838 Found link https://files.pythonhosted.org/packages/1e/b4/47edffa0d3c98612b5090be821c4a672a9e217ac47318615941301329965/pytom_match_pick-0.8.0.tar.gz (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.10), version: 0.8.0 2026-03-02T15:13:53,838 Skipping link: No binaries permitted for pytom-match-pick: https://files.pythonhosted.org/packages/95/f9/1cd133200aec75733b9091373ffa0570f42637dcf477fd545cc0848d8371/pytom_match_pick-0.9.0-py3-none-any.whl (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.10) 2026-03-02T15:13:53,839 Found link https://files.pythonhosted.org/packages/36/eb/10652a1e5c9d66922231978831c351bf21a0f815c0a4798fc41b48b970a1/pytom_match_pick-0.9.0.tar.gz (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.10), version: 0.9.0 2026-03-02T15:13:53,840 Skipping link: No binaries permitted for pytom-match-pick: https://files.pythonhosted.org/packages/ef/7d/f5eb0e6da88b7a73bea9e410cb8c798cfab7272a586f3c83fe6c661b9b2d/pytom_match_pick-0.10.0-py3-none-any.whl (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.11) 2026-03-02T15:13:53,841 Found link https://files.pythonhosted.org/packages/7a/21/ffe14c7369dcb3e4b6a3528d87a7db848184e7847ade39f04b0e318b5c45/pytom_match_pick-0.10.0.tar.gz (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.11), version: 0.10.0 2026-03-02T15:13:53,842 Skipping link: No binaries permitted for pytom-match-pick: https://files.pythonhosted.org/packages/06/60/6b7173e6087bd5ba2e96e1b0d33fef499e15393c7c386d4324af8a51b6a9/pytom_match_pick-0.11.0-py3-none-any.whl (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.11) 2026-03-02T15:13:53,842 Found link https://files.pythonhosted.org/packages/9a/b1/c2fec81e88d8f1b71b25e4b0a099bee6ddf369de023eb5bec375857d872d/pytom_match_pick-0.11.0.tar.gz (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.11), version: 0.11.0 2026-03-02T15:13:53,843 Skipping link: No binaries permitted for pytom-match-pick: https://files.pythonhosted.org/packages/0d/f7/11c1363049661abcd70765e29eb667e54f027271dd2e4cb1d289cb1d60a4/pytom_match_pick-0.11.1-py3-none-any.whl (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.11) 2026-03-02T15:13:53,844 Found link https://files.pythonhosted.org/packages/80/db/6d062fb6fb8652bd11d22fda1d5d2f98deb2a0b66eb65ae9abf4d1678164/pytom_match_pick-0.11.1.tar.gz (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.11), version: 0.11.1 2026-03-02T15:13:53,844 Skipping link: No binaries permitted for pytom-match-pick: https://files.pythonhosted.org/packages/d1/20/8a7a63294877a5cf0711a4098b1ebc712dccccf0ec2a58e74df4f3b8b9a3/pytom_match_pick-0.12.0-py3-none-any.whl (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.11) 2026-03-02T15:13:53,845 Found link https://files.pythonhosted.org/packages/88/5a/3ace00117d1b748bbd1a01824ed639fc7e139b26123f42f983b9973b8eb3/pytom_match_pick-0.12.0.tar.gz (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.11), version: 0.12.0 2026-03-02T15:13:53,846 Skipping link: No binaries permitted for pytom-match-pick: https://files.pythonhosted.org/packages/23/c1/176b09bc87aaa2fa99727d1118d5fb18bda759237a7b468930f4f57132fc/pytom_match_pick-0.12.1-py3-none-any.whl (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.11) 2026-03-02T15:13:53,847 Found link https://files.pythonhosted.org/packages/f5/78/70d02cb0b25aa7aca547888bd14aa6aa96ee4165d50070b1195cb055fe41/pytom_match_pick-0.12.1.tar.gz (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.11), version: 0.12.1 2026-03-02T15:13:53,848 Skipping link: No binaries permitted for pytom-match-pick: https://files.pythonhosted.org/packages/09/3e/fbb94bbde4fa755e5167d1f94ef7f1e9b2042ca3f18e2023794100b00576/pytom_match_pick-0.13.0-py3-none-any.whl (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.11) 2026-03-02T15:13:53,849 Found link https://files.pythonhosted.org/packages/c4/76/2eec0732913b08b04099ff44dfdecfd5370c820fb1b8215481cdbc71ccb1/pytom_match_pick-0.13.0.tar.gz (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.11), version: 0.13.0 2026-03-02T15:13:53,850 Fetching project page and analyzing links: https://www.piwheels.org/simple/pytom-match-pick/ 2026-03-02T15:13:53,850 Getting page https://www.piwheels.org/simple/pytom-match-pick/ 2026-03-02T15:13:53,852 Found index url https://www.piwheels.org/simple 2026-03-02T15:13:54,022 Fetched page https://www.piwheels.org/simple/pytom-match-pick/ as text/html 2026-03-02T15:13:54,028 Skipping link: No binaries permitted for pytom-match-pick: https://archive1.piwheels.org/simple/pytom-match-pick/pytom_match_pick-0.12.1-py3-none-any.whl#sha256=8e8a0066378ebf6fd114c5aa826ee1fb89bda3c7993e590d15b024684735ab8c (from https://www.piwheels.org/simple/pytom-match-pick/) (requires-python:>=3.11) 2026-03-02T15:13:54,029 Skipping link: No binaries permitted for pytom-match-pick: https://archive1.piwheels.org/simple/pytom-match-pick/pytom_match_pick-0.12.0-py3-none-any.whl#sha256=493a8f47e01e5997ece45c04f911aefb36978a88016bd5318000f8f6427b8a35 (from https://www.piwheels.org/simple/pytom-match-pick/) (requires-python:>=3.11) 2026-03-02T15:13:54,029 Skipping link: No binaries permitted for pytom-match-pick: https://archive1.piwheels.org/simple/pytom-match-pick/pytom_match_pick-0.11.1-py3-none-any.whl#sha256=9ea3ce41a376085ea1395999ed7ea2a93ecabdf5fa1de70b2d0ff9b9a545df3b (from https://www.piwheels.org/simple/pytom-match-pick/) (requires-python:>=3.11) 2026-03-02T15:13:54,030 Skipping link: No binaries permitted for pytom-match-pick: https://archive1.piwheels.org/simple/pytom-match-pick/pytom_match_pick-0.11.0-py3-none-any.whl#sha256=69ee84d80e42e7007e4b77f690fecdf9f8367bc21076bba7525160b5f93240e6 (from https://www.piwheels.org/simple/pytom-match-pick/) (requires-python:>=3.11) 2026-03-02T15:13:54,030 Skipping link: No binaries permitted for pytom-match-pick: https://archive1.piwheels.org/simple/pytom-match-pick/pytom_match_pick-0.10.0-py3-none-any.whl#sha256=f2024a5c58429dc3720fce8c6b77a2fe70b87172a93e37424645189bd4a7b9f4 (from https://www.piwheels.org/simple/pytom-match-pick/) (requires-python:>=3.11) 2026-03-02T15:13:54,031 Skipping link: No binaries permitted for pytom-match-pick: https://archive1.piwheels.org/simple/pytom-match-pick/pytom_match_pick-0.9.0-py3-none-any.whl#sha256=d43a4f2de828aa00b8f286422fa98e91f58a3d73963f9b00005496a0b3bdbe61 (from https://www.piwheels.org/simple/pytom-match-pick/) (requires-python:>=3.10) 2026-03-02T15:13:54,031 Skipping link: No binaries permitted for pytom-match-pick: https://archive1.piwheels.org/simple/pytom-match-pick/pytom_match_pick-0.8.0-py3-none-any.whl#sha256=f5a77bb5f3196d3e9cc4106b2420679870b3c7a9af90981292cb60ac3fdd174b (from https://www.piwheels.org/simple/pytom-match-pick/) (requires-python:>=3.10) 2026-03-02T15:13:54,032 Skipping link: No binaries permitted for pytom-match-pick: https://archive1.piwheels.org/simple/pytom-match-pick/pytom_match_pick-0.7.11-py3-none-any.whl#sha256=fcb7aae2a3c96808d8ee28280ce461c4a775cd7964fb773eaca9b4af86a83143 (from https://www.piwheels.org/simple/pytom-match-pick/) (requires-python:>=3.10) 2026-03-02T15:13:54,033 Skipping link: No binaries permitted for pytom-match-pick: 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https://archive1.piwheels.org/simple/pytom-match-pick/pytom_match_pick-0.7.2-py3-none-any.whl#sha256=3db888a58c6dd08f07f4c785bd0f06910b7dfd23843b96a96e90a53597fe9b81 (from https://www.piwheels.org/simple/pytom-match-pick/) (requires-python:>=3.9) 2026-03-02T15:13:54,035 Skipping link: No binaries permitted for pytom-match-pick: https://archive1.piwheels.org/simple/pytom-match-pick/pytom_match_pick-0.7.1-py3-none-any.whl#sha256=2d8c4573029bbf0c16a1bb6d747c8131ac8e8c2f6f87ae7c94ff5f5271a43a16 (from https://www.piwheels.org/simple/pytom-match-pick/) (requires-python:>=3.9) 2026-03-02T15:13:54,036 Skipping link: No binaries permitted for pytom-match-pick: https://archive1.piwheels.org/simple/pytom-match-pick/pytom_match_pick-0.7.0-py3-none-any.whl#sha256=a252bdbc4e0df9a4417b30e3a0f8a1d894feb7ce0f106717dd019fbfff9eed43 (from https://www.piwheels.org/simple/pytom-match-pick/) (requires-python:>=3.9) 2026-03-02T15:13:54,037 Skipping link: No binaries permitted for pytom-match-pick: https://archive1.piwheels.org/simple/pytom-match-pick/pytom_match_pick-0.6.0-py3-none-any.whl#sha256=e37348bec06b4b7a2f06b2904dba5cfc3485a84dfbfb73a61ab9c49dbe60aa08 (from https://www.piwheels.org/simple/pytom-match-pick/) (requires-python:>=3.9) 2026-03-02T15:13:54,037 Skipping link: No binaries permitted for pytom-match-pick: https://archive1.piwheels.org/simple/pytom-match-pick/pytom_match_pick-0.5.0-py3-none-any.whl#sha256=929ad4bcee62521a0e83bc99688468940d4a6fcf362c71a9c8d14320e0f1ba0c (from https://www.piwheels.org/simple/pytom-match-pick/) (requires-python:>=3.9) 2026-03-02T15:13:54,038 Skipping link: No binaries permitted for pytom-match-pick: https://archive1.piwheels.org/simple/pytom-match-pick/pytom_match_pick-0.4.3-py3-none-any.whl#sha256=69aeea6091ab5fb0f7e1a58bfe86631c6c71e95d296b7e55b12701cc1fd02e7a (from https://www.piwheels.org/simple/pytom-match-pick/) (requires-python:>=3.9) 2026-03-02T15:13:54,038 Skipping link: not a file: https://www.piwheels.org/simple/pytom-match-pick/ 2026-03-02T15:13:54,039 Skipping link: not a file: https://pypi.org/simple/pytom-match-pick/ 2026-03-02T15:13:54,062 Given no hashes to check 1 links for project 'pytom-match-pick': discarding no candidates 2026-03-02T15:13:54,082 Collecting pytom-match-pick==0.13.0 2026-03-02T15:13:54,084 Created temporary directory: /tmp/pip-unpack-mltvhwud 2026-03-02T15:13:54,228 Downloading pytom_match_pick-0.13.0.tar.gz (102 kB) 2026-03-02T15:13:54,391 Added pytom-match-pick==0.13.0 from https://files.pythonhosted.org/packages/c4/76/2eec0732913b08b04099ff44dfdecfd5370c820fb1b8215481cdbc71ccb1/pytom_match_pick-0.13.0.tar.gz to build tracker '/tmp/pip-build-tracker-plf45rxa' 2026-03-02T15:13:54,395 Created temporary directory: /tmp/pip-build-env-3lc2y4qq 2026-03-02T15:13:54,400 Installing build dependencies: started 2026-03-02T15:13:54,401 Running command pip subprocess to install build dependencies 2026-03-02T15:13:55,550 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-03-02T15:13:56,126 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-03-02T15:13:56,151 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-03-02T15:13:57,872 Collecting setuptools 2026-03-02T15:13:57,947 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.0-py3-none-any.whl (1.0 MB) 2026-03-02T15:14:00,909 Installing collected packages: setuptools 2026-03-02T15:14:03,945 Successfully installed setuptools-82.0.0 2026-03-02T15:14:04,212 Installing build dependencies: finished with status 'done' 2026-03-02T15:14:04,219 Getting requirements to build wheel: started 2026-03-02T15:14:04,220 Running command Getting requirements to build wheel 2026-03-02T15:14:04,815 `pytom_tm.entry_points:estimate_roc [plotting]` - using extras for entry points is not recommended 2026-03-02T15:14:04,819 /tmp/pip-build-env-3lc2y4qq/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-03-02T15:14:04,820 !! 2026-03-02T15:14:04,821 ******************************************************************************** 2026-03-02T15:14:04,821 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-03-02T15:14:04,822 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-03-02T15:14:04,823 or your builds will no longer be supported. 2026-03-02T15:14:04,824 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-03-02T15:14:04,824 ******************************************************************************** 2026-03-02T15:14:04,825 !! 2026-03-02T15:14:04,825 corresp(dist, value, root_dir) 2026-03-02T15:14:04,905 /tmp/pip-build-env-3lc2y4qq/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-03-02T15:14:04,906 !! 2026-03-02T15:14:04,907 ******************************************************************************** 2026-03-02T15:14:04,907 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-03-02T15:14:04,909 License :: OSI Approved :: GNU General Public License v2 (GPLv2) 2026-03-02T15:14:04,910 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-03-02T15:14:04,910 ******************************************************************************** 2026-03-02T15:14:04,911 !! 2026-03-02T15:14:04,912 dist._finalize_license_expression() 2026-03-02T15:14:04,913 /tmp/pip-build-env-3lc2y4qq/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-03-02T15:14:04,913 !! 2026-03-02T15:14:04,914 ******************************************************************************** 2026-03-02T15:14:04,915 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-03-02T15:14:04,916 License :: OSI Approved :: GNU General Public License v2 (GPLv2) 2026-03-02T15:14:04,918 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-03-02T15:14:04,919 ******************************************************************************** 2026-03-02T15:14:04,920 !! 2026-03-02T15:14:04,921 self._finalize_license_expression() 2026-03-02T15:14:04,924 running egg_info 2026-03-02T15:14:04,930 writing src/pytom_match_pick.egg-info/PKG-INFO 2026-03-02T15:14:04,937 writing dependency_links to src/pytom_match_pick.egg-info/dependency_links.txt 2026-03-02T15:14:04,939 writing entry points to src/pytom_match_pick.egg-info/entry_points.txt 2026-03-02T15:14:04,943 writing requirements to src/pytom_match_pick.egg-info/requires.txt 2026-03-02T15:14:04,944 writing top-level names to src/pytom_match_pick.egg-info/top_level.txt 2026-03-02T15:14:04,965 reading manifest file 'src/pytom_match_pick.egg-info/SOURCES.txt' 2026-03-02T15:14:04,969 reading manifest template 'MANIFEST.in' 2026-03-02T15:14:04,971 adding license file 'LICENSE' 2026-03-02T15:14:04,975 writing manifest file 'src/pytom_match_pick.egg-info/SOURCES.txt' 2026-03-02T15:14:05,073 Getting requirements to build wheel: finished with status 'done' 2026-03-02T15:14:05,077 Created temporary directory: /tmp/pip-modern-metadata-b38ql6n4 2026-03-02T15:14:05,079 Preparing metadata (pyproject.toml): started 2026-03-02T15:14:05,080 Running command Preparing metadata (pyproject.toml) 2026-03-02T15:14:05,642 `pytom_tm.entry_points:estimate_roc [plotting]` - using extras for entry points is not recommended 2026-03-02T15:14:05,646 /tmp/pip-build-env-3lc2y4qq/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-03-02T15:14:05,647 !! 2026-03-02T15:14:05,648 ******************************************************************************** 2026-03-02T15:14:05,649 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-03-02T15:14:05,650 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-03-02T15:14:05,650 or your builds will no longer be supported. 2026-03-02T15:14:05,651 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-03-02T15:14:05,651 ******************************************************************************** 2026-03-02T15:14:05,652 !! 2026-03-02T15:14:05,653 corresp(dist, value, root_dir) 2026-03-02T15:14:05,728 /tmp/pip-build-env-3lc2y4qq/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-03-02T15:14:05,729 !! 2026-03-02T15:14:05,730 ******************************************************************************** 2026-03-02T15:14:05,731 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-03-02T15:14:05,732 License :: OSI Approved :: GNU General Public License v2 (GPLv2) 2026-03-02T15:14:05,733 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-03-02T15:14:05,733 ******************************************************************************** 2026-03-02T15:14:05,734 !! 2026-03-02T15:14:05,735 dist._finalize_license_expression() 2026-03-02T15:14:05,735 /tmp/pip-build-env-3lc2y4qq/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-03-02T15:14:05,736 !! 2026-03-02T15:14:05,737 ******************************************************************************** 2026-03-02T15:14:05,738 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-03-02T15:14:05,739 License :: OSI Approved :: GNU General Public License v2 (GPLv2) 2026-03-02T15:14:05,741 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-03-02T15:14:05,741 ******************************************************************************** 2026-03-02T15:14:05,743 !! 2026-03-02T15:14:05,743 self._finalize_license_expression() 2026-03-02T15:14:05,744 running dist_info 2026-03-02T15:14:05,754 creating /tmp/pip-modern-metadata-b38ql6n4/pytom_match_pick.egg-info 2026-03-02T15:14:05,755 writing /tmp/pip-modern-metadata-b38ql6n4/pytom_match_pick.egg-info/PKG-INFO 2026-03-02T15:14:05,762 writing dependency_links to /tmp/pip-modern-metadata-b38ql6n4/pytom_match_pick.egg-info/dependency_links.txt 2026-03-02T15:14:05,764 writing entry points to /tmp/pip-modern-metadata-b38ql6n4/pytom_match_pick.egg-info/entry_points.txt 2026-03-02T15:14:05,766 writing requirements to /tmp/pip-modern-metadata-b38ql6n4/pytom_match_pick.egg-info/requires.txt 2026-03-02T15:14:05,768 writing top-level names to /tmp/pip-modern-metadata-b38ql6n4/pytom_match_pick.egg-info/top_level.txt 2026-03-02T15:14:05,769 writing manifest file '/tmp/pip-modern-metadata-b38ql6n4/pytom_match_pick.egg-info/SOURCES.txt' 2026-03-02T15:14:05,788 reading manifest file '/tmp/pip-modern-metadata-b38ql6n4/pytom_match_pick.egg-info/SOURCES.txt' 2026-03-02T15:14:05,790 reading manifest template 'MANIFEST.in' 2026-03-02T15:14:05,791 adding license file 'LICENSE' 2026-03-02T15:14:05,794 writing manifest file '/tmp/pip-modern-metadata-b38ql6n4/pytom_match_pick.egg-info/SOURCES.txt' 2026-03-02T15:14:05,795 creating '/tmp/pip-modern-metadata-b38ql6n4/pytom_match_pick-0.13.0.dist-info' 2026-03-02T15:14:05,923 Preparing metadata (pyproject.toml): finished with status 'done' 2026-03-02T15:14:05,932 Source in /tmp/pip-wheel-hefu8uqo/pytom-match-pick_d5ce0e3610094f1284c07891596c6439 has version 0.13.0, which satisfies requirement pytom-match-pick==0.13.0 from https://files.pythonhosted.org/packages/c4/76/2eec0732913b08b04099ff44dfdecfd5370c820fb1b8215481cdbc71ccb1/pytom_match_pick-0.13.0.tar.gz 2026-03-02T15:14:05,933 Removed pytom-match-pick==0.13.0 from https://files.pythonhosted.org/packages/c4/76/2eec0732913b08b04099ff44dfdecfd5370c820fb1b8215481cdbc71ccb1/pytom_match_pick-0.13.0.tar.gz from build tracker '/tmp/pip-build-tracker-plf45rxa' 2026-03-02T15:14:05,946 Created temporary directory: /tmp/pip-unpack-6zud4aza 2026-03-02T15:14:05,947 Building wheels for collected packages: pytom-match-pick 2026-03-02T15:14:05,951 Created temporary directory: /tmp/pip-wheel-r2seah9z 2026-03-02T15:14:05,952 Destination directory: /tmp/pip-wheel-r2seah9z 2026-03-02T15:14:05,954 Building wheel for pytom-match-pick (pyproject.toml): started 2026-03-02T15:14:05,955 Running command Building wheel for pytom-match-pick (pyproject.toml) 2026-03-02T15:14:06,531 `pytom_tm.entry_points:estimate_roc [plotting]` - using extras for entry points is not recommended 2026-03-02T15:14:06,535 /tmp/pip-build-env-3lc2y4qq/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-03-02T15:14:06,536 !! 2026-03-02T15:14:06,537 ******************************************************************************** 2026-03-02T15:14:06,537 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-03-02T15:14:06,538 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-03-02T15:14:06,539 or your builds will no longer be supported. 2026-03-02T15:14:06,540 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-03-02T15:14:06,541 ******************************************************************************** 2026-03-02T15:14:06,542 !! 2026-03-02T15:14:06,543 corresp(dist, value, root_dir) 2026-03-02T15:14:06,607 /tmp/pip-build-env-3lc2y4qq/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-03-02T15:14:06,607 !! 2026-03-02T15:14:06,609 ******************************************************************************** 2026-03-02T15:14:06,609 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-03-02T15:14:06,610 License :: OSI Approved :: GNU General Public License v2 (GPLv2) 2026-03-02T15:14:06,611 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-03-02T15:14:06,612 ******************************************************************************** 2026-03-02T15:14:06,613 !! 2026-03-02T15:14:06,614 dist._finalize_license_expression() 2026-03-02T15:14:06,614 /tmp/pip-build-env-3lc2y4qq/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-03-02T15:14:06,615 !! 2026-03-02T15:14:06,616 ******************************************************************************** 2026-03-02T15:14:06,617 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-03-02T15:14:06,618 License :: OSI Approved :: GNU General Public License v2 (GPLv2) 2026-03-02T15:14:06,620 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-03-02T15:14:06,620 ******************************************************************************** 2026-03-02T15:14:06,622 !! 2026-03-02T15:14:06,622 self._finalize_license_expression() 2026-03-02T15:14:06,623 running bdist_wheel 2026-03-02T15:14:06,634 running build 2026-03-02T15:14:06,634 running build_py 2026-03-02T15:14:06,640 creating build/lib/pytom_tm 2026-03-02T15:14:06,643 copying src/pytom_tm/correlation.py -> build/lib/pytom_tm 2026-03-02T15:14:06,645 copying src/pytom_tm/utils.py -> build/lib/pytom_tm 2026-03-02T15:14:06,647 copying src/pytom_tm/plotting.py -> build/lib/pytom_tm 2026-03-02T15:14:06,649 copying src/pytom_tm/weights.py -> build/lib/pytom_tm 2026-03-02T15:14:06,652 copying src/pytom_tm/dataclass.py -> build/lib/pytom_tm 2026-03-02T15:14:06,654 copying src/pytom_tm/tmjob.py -> build/lib/pytom_tm 2026-03-02T15:14:06,657 copying src/pytom_tm/merge_stars.py -> build/lib/pytom_tm 2026-03-02T15:14:06,659 copying src/pytom_tm/json.py -> build/lib/pytom_tm 2026-03-02T15:14:06,661 copying src/pytom_tm/extract.py -> build/lib/pytom_tm 2026-03-02T15:14:06,663 copying src/pytom_tm/matching.py -> build/lib/pytom_tm 2026-03-02T15:14:06,666 copying src/pytom_tm/__init__.py -> build/lib/pytom_tm 2026-03-02T15:14:06,668 copying src/pytom_tm/entry_points.py -> build/lib/pytom_tm 2026-03-02T15:14:06,671 copying src/pytom_tm/mask.py -> build/lib/pytom_tm 2026-03-02T15:14:06,673 copying src/pytom_tm/template.py -> build/lib/pytom_tm 2026-03-02T15:14:06,675 copying src/pytom_tm/parallel.py -> build/lib/pytom_tm 2026-03-02T15:14:06,677 copying src/pytom_tm/angles.py -> build/lib/pytom_tm 2026-03-02T15:14:06,679 copying src/pytom_tm/io.py -> build/lib/pytom_tm 2026-03-02T15:14:06,682 running egg_info 2026-03-02T15:14:06,691 writing src/pytom_match_pick.egg-info/PKG-INFO 2026-03-02T15:14:06,698 writing dependency_links to src/pytom_match_pick.egg-info/dependency_links.txt 2026-03-02T15:14:06,700 writing entry points to src/pytom_match_pick.egg-info/entry_points.txt 2026-03-02T15:14:06,702 writing requirements to src/pytom_match_pick.egg-info/requires.txt 2026-03-02T15:14:06,704 writing top-level names to src/pytom_match_pick.egg-info/top_level.txt 2026-03-02T15:14:06,713 reading manifest file 'src/pytom_match_pick.egg-info/SOURCES.txt' 2026-03-02T15:14:06,718 reading manifest template 'MANIFEST.in' 2026-03-02T15:14:06,719 adding license file 'LICENSE' 2026-03-02T15:14:06,723 writing manifest file 'src/pytom_match_pick.egg-info/SOURCES.txt' 2026-03-02T15:14:06,736 installing to build/bdist.linux-armv7l/wheel 2026-03-02T15:14:06,737 running install 2026-03-02T15:14:06,760 running install_lib 2026-03-02T15:14:06,766 creating build/bdist.linux-armv7l/wheel 2026-03-02T15:14:06,769 creating build/bdist.linux-armv7l/wheel/pytom_tm 2026-03-02T15:14:06,770 copying build/lib/pytom_tm/correlation.py -> build/bdist.linux-armv7l/wheel/./pytom_tm 2026-03-02T15:14:06,773 copying build/lib/pytom_tm/utils.py -> build/bdist.linux-armv7l/wheel/./pytom_tm 2026-03-02T15:14:06,775 copying build/lib/pytom_tm/plotting.py -> build/bdist.linux-armv7l/wheel/./pytom_tm 2026-03-02T15:14:06,778 copying build/lib/pytom_tm/weights.py -> build/bdist.linux-armv7l/wheel/./pytom_tm 2026-03-02T15:14:06,781 copying build/lib/pytom_tm/dataclass.py -> build/bdist.linux-armv7l/wheel/./pytom_tm 2026-03-02T15:14:06,784 copying build/lib/pytom_tm/tmjob.py -> build/bdist.linux-armv7l/wheel/./pytom_tm 2026-03-02T15:14:06,787 copying build/lib/pytom_tm/merge_stars.py -> build/bdist.linux-armv7l/wheel/./pytom_tm 2026-03-02T15:14:06,790 copying build/lib/pytom_tm/json.py -> build/bdist.linux-armv7l/wheel/./pytom_tm 2026-03-02T15:14:06,792 copying build/lib/pytom_tm/extract.py -> build/bdist.linux-armv7l/wheel/./pytom_tm 2026-03-02T15:14:06,795 copying build/lib/pytom_tm/matching.py -> build/bdist.linux-armv7l/wheel/./pytom_tm 2026-03-02T15:14:06,798 copying build/lib/pytom_tm/__init__.py -> build/bdist.linux-armv7l/wheel/./pytom_tm 2026-03-02T15:14:06,800 copying build/lib/pytom_tm/entry_points.py -> build/bdist.linux-armv7l/wheel/./pytom_tm 2026-03-02T15:14:06,804 copying build/lib/pytom_tm/mask.py -> build/bdist.linux-armv7l/wheel/./pytom_tm 2026-03-02T15:14:06,806 copying build/lib/pytom_tm/template.py -> build/bdist.linux-armv7l/wheel/./pytom_tm 2026-03-02T15:14:06,809 copying build/lib/pytom_tm/parallel.py -> build/bdist.linux-armv7l/wheel/./pytom_tm 2026-03-02T15:14:06,811 copying build/lib/pytom_tm/angles.py -> build/bdist.linux-armv7l/wheel/./pytom_tm 2026-03-02T15:14:06,814 copying build/lib/pytom_tm/io.py -> build/bdist.linux-armv7l/wheel/./pytom_tm 2026-03-02T15:14:06,817 running install_egg_info 2026-03-02T15:14:06,822 Copying src/pytom_match_pick.egg-info to build/bdist.linux-armv7l/wheel/./pytom_match_pick-0.13.0-py3.11.egg-info 2026-03-02T15:14:06,834 running install_scripts 2026-03-02T15:14:06,848 creating build/bdist.linux-armv7l/wheel/pytom_match_pick-0.13.0.dist-info/WHEEL 2026-03-02T15:14:06,851 creating '/tmp/pip-wheel-r2seah9z/.tmp-v4djjngl/pytom_match_pick-0.13.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-03-02T15:14:06,856 adding 'pytom_match_pick-0.13.0.dist-info/licenses/LICENSE' 2026-03-02T15:14:06,859 adding 'pytom_tm/__init__.py' 2026-03-02T15:14:06,860 adding 'pytom_tm/angles.py' 2026-03-02T15:14:06,862 adding 'pytom_tm/correlation.py' 2026-03-02T15:14:06,863 adding 'pytom_tm/dataclass.py' 2026-03-02T15:14:06,868 adding 'pytom_tm/entry_points.py' 2026-03-02T15:14:06,871 adding 'pytom_tm/extract.py' 2026-03-02T15:14:06,874 adding 'pytom_tm/io.py' 2026-03-02T15:14:06,876 adding 'pytom_tm/json.py' 2026-03-02T15:14:06,877 adding 'pytom_tm/mask.py' 2026-03-02T15:14:06,879 adding 'pytom_tm/matching.py' 2026-03-02T15:14:06,881 adding 'pytom_tm/merge_stars.py' 2026-03-02T15:14:06,882 adding 'pytom_tm/parallel.py' 2026-03-02T15:14:06,885 adding 'pytom_tm/plotting.py' 2026-03-02T15:14:06,886 adding 'pytom_tm/template.py' 2026-03-02T15:14:06,891 adding 'pytom_tm/tmjob.py' 2026-03-02T15:14:06,893 adding 'pytom_tm/utils.py' 2026-03-02T15:14:06,896 adding 'pytom_tm/weights.py' 2026-03-02T15:14:06,900 adding 'pytom_match_pick-0.13.0.dist-info/METADATA' 2026-03-02T15:14:06,902 adding 'pytom_match_pick-0.13.0.dist-info/WHEEL' 2026-03-02T15:14:06,903 adding 'pytom_match_pick-0.13.0.dist-info/entry_points.txt' 2026-03-02T15:14:06,904 adding 'pytom_match_pick-0.13.0.dist-info/top_level.txt' 2026-03-02T15:14:06,905 adding 'pytom_match_pick-0.13.0.dist-info/RECORD' 2026-03-02T15:14:06,907 removing build/bdist.linux-armv7l/wheel 2026-03-02T15:14:07,018 Building wheel for pytom-match-pick (pyproject.toml): finished with status 'done' 2026-03-02T15:14:07,024 Created wheel for pytom-match-pick: filename=pytom_match_pick-0.13.0-py3-none-any.whl size=79747 sha256=10077e954ad619cba24be67614d5dc67fa53c29d4679fdfdb2f890b11bb8e497 2026-03-02T15:14:07,025 Stored in directory: /tmp/pip-ephem-wheel-cache-05yav68s/wheels/0b/21/0a/9e904f3f52b0a5195074fa89603372726236a72e32a561a68c 2026-03-02T15:14:07,050 Successfully built pytom-match-pick 2026-03-02T15:14:07,054 Removed build tracker: '/tmp/pip-build-tracker-plf45rxa'