2026-03-04T20:17:20,272 Created temporary directory: /tmp/pip-ephem-wheel-cache-qbgkse8y 2026-03-04T20:17:20,274 Created temporary directory: /tmp/pip-build-tracker-sphzqp6f 2026-03-04T20:17:20,275 Initialized build tracking at /tmp/pip-build-tracker-sphzqp6f 2026-03-04T20:17:20,275 Created build tracker: /tmp/pip-build-tracker-sphzqp6f 2026-03-04T20:17:20,275 Entered build tracker: /tmp/pip-build-tracker-sphzqp6f 2026-03-04T20:17:20,276 Created temporary directory: /tmp/pip-wheel-thk7ig3e 2026-03-04T20:17:20,279 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-03-04T20:17:20,282 Created temporary directory: /tmp/pip-ephem-wheel-cache-oqtkhvl0 2026-03-04T20:17:20,304 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-03-04T20:17:20,307 2 location(s) to search for versions of orange3-singlecell: 2026-03-04T20:17:20,307 * https://pypi.org/simple/orange3-singlecell/ 2026-03-04T20:17:20,307 * https://www.piwheels.org/simple/orange3-singlecell/ 2026-03-04T20:17:20,308 Fetching project page and analyzing links: https://pypi.org/simple/orange3-singlecell/ 2026-03-04T20:17:20,309 Getting page https://pypi.org/simple/orange3-singlecell/ 2026-03-04T20:17:20,310 Found index url https://pypi.org/simple 2026-03-04T20:17:20,526 Fetched page https://pypi.org/simple/orange3-singlecell/ as application/vnd.pypi.simple.v1+json 2026-03-04T20:17:20,532 Found link https://files.pythonhosted.org/packages/5b/95/54260cf07df572e565ee6acea472bebfbed0da57913b996797ad285ea4b1/Orange3-SingleCell-0.8.1.tar.gz (from https://pypi.org/simple/orange3-singlecell/), version: 0.8.1 2026-03-04T20:17:20,533 Found link https://files.pythonhosted.org/packages/4c/48/0039869278cce8c99a42617108f3cecd0dee986b8db555a8a4993372a7db/Orange3-SingleCell-0.8.2.tar.gz (from https://pypi.org/simple/orange3-singlecell/), version: 0.8.2 2026-03-04T20:17:20,534 Found link https://files.pythonhosted.org/packages/2b/8c/605f592e766cd135eecd5b228a5c16e54efdbf47e9bff0d9ebc84db14474/Orange3-SingleCell-0.9.0.tar.gz (from https://pypi.org/simple/orange3-singlecell/), version: 0.9.0 2026-03-04T20:17:20,534 Found link https://files.pythonhosted.org/packages/67/2b/412646f09d09f037cfef782531ab48d7f4e527f6d66e13c81ea897723364/Orange3-SingleCell-0.9.1.tar.gz (from https://pypi.org/simple/orange3-singlecell/), version: 0.9.1 2026-03-04T20:17:20,535 Found link https://files.pythonhosted.org/packages/4d/1e/c218913869d1cfb037dee0a98dea81608f12075728daf8bbd7d260628af7/Orange3-SingleCell-0.9.5.tar.gz (from https://pypi.org/simple/orange3-singlecell/), version: 0.9.5 2026-03-04T20:17:20,536 Found link https://files.pythonhosted.org/packages/7d/39/ed0faf7e4aab314bb2f1106447afc8c085ac109bba75b1ba99c074037622/Orange3-SingleCell-1.0.0.tar.gz (from https://pypi.org/simple/orange3-singlecell/), version: 1.0.0 2026-03-04T20:17:20,537 Found link https://files.pythonhosted.org/packages/38/54/6704ce255be73bddbe97f027a5f796ac1ddc38b9847e87cf7a6d8ccbf847/Orange3-SingleCell-1.1.0.tar.gz (from https://pypi.org/simple/orange3-singlecell/), version: 1.1.0 2026-03-04T20:17:20,538 Found link https://files.pythonhosted.org/packages/dc/f2/34625edfeeec8ed2c0144693b0b42c7e7b50168bd869e61931eb18648379/Orange3-SingleCell-1.2.0.tar.gz (from https://pypi.org/simple/orange3-singlecell/) (requires-python:>=3.6), version: 1.2.0 2026-03-04T20:17:20,539 Skipping link: No binaries permitted for orange3-singlecell: https://files.pythonhosted.org/packages/c9/63/f8a52b0426e95cfc34a312d5f8a902f75aeb45bb8aa4c5f0303af1ab25de/Orange3_SingleCell-1.2.0-py3-none-any.whl (from https://pypi.org/simple/orange3-singlecell/) (requires-python:>=3.6) 2026-03-04T20:17:20,540 Found link https://files.pythonhosted.org/packages/63/2c/b7fdb135fac07456a3d16e84d977faf6b8a10e5535eae2b72076e69e13cf/Orange3-SingleCell-1.3.0.tar.gz (from https://pypi.org/simple/orange3-singlecell/) (requires-python:>=3.6), version: 1.3.0 2026-03-04T20:17:20,540 Skipping link: No binaries permitted for orange3-singlecell: https://files.pythonhosted.org/packages/1f/18/7f0dca3edcb871e3df638818baca2dd57ee6001c56bd6c73f697074afba3/Orange3_SingleCell-1.3.0-py3-none-any.whl (from https://pypi.org/simple/orange3-singlecell/) (requires-python:>=3.6) 2026-03-04T20:17:20,542 Found link https://files.pythonhosted.org/packages/6c/e2/a435e6c9f0c0e45a1b0bc8869a1c9df005656e41e29324e4e8518dbf65bf/Orange3-SingleCell-1.4.0.tar.gz (from https://pypi.org/simple/orange3-singlecell/) (requires-python:>=3.6), version: 1.4.0 2026-03-04T20:17:20,542 Skipping link: No binaries permitted for orange3-singlecell: https://files.pythonhosted.org/packages/b1/62/03222dac7c4272031c896f217e74e12c99e65b3333f578f4677501c014ec/Orange3_SingleCell-1.4.0-py3-none-any.whl (from https://pypi.org/simple/orange3-singlecell/) (requires-python:>=3.6) 2026-03-04T20:17:20,543 Found link https://files.pythonhosted.org/packages/83/b0/f6d9903bc780be4950342b5b132ae1a62ff1d3ec137ff3d8724cbfb4c9d8/Orange3-SingleCell-1.5.0.tar.gz (from https://pypi.org/simple/orange3-singlecell/) (requires-python:>=3.6), version: 1.5.0 2026-03-04T20:17:20,544 Skipping link: No binaries permitted for orange3-singlecell: https://files.pythonhosted.org/packages/d6/6c/18b1edb84a6765f44c3f50510959ca3638e215dced4597c1a856ea51df38/Orange3_SingleCell-1.5.0-py3-none-any.whl (from https://pypi.org/simple/orange3-singlecell/) (requires-python:>=3.6) 2026-03-04T20:17:20,545 Found link https://files.pythonhosted.org/packages/c1/dd/c7e76c4a3cf5d08aa5ffb5c10472a6a0e6aa3900c2287b9400413a2eaf41/Orange3-SingleCell-1.6.0.tar.gz (from https://pypi.org/simple/orange3-singlecell/) (requires-python:>=3.6), version: 1.6.0 2026-03-04T20:17:20,545 Skipping link: No binaries permitted for orange3-singlecell: https://files.pythonhosted.org/packages/e8/5b/dac38da3d108dbbbf87b4567b331bf444b47d71ef41978ec4f358bfebf5c/Orange3_SingleCell-1.6.0-py3-none-any.whl (from https://pypi.org/simple/orange3-singlecell/) (requires-python:>=3.6) 2026-03-04T20:17:20,546 Skipping link: No binaries permitted for orange3-singlecell: https://files.pythonhosted.org/packages/88/d9/7f579472fcecb3f540f6ec0c4e0f7809727948f8e7ecb85705f154928d61/Orange3_SingleCell-1.7.0-py3-none-any.whl (from https://pypi.org/simple/orange3-singlecell/) (requires-python:>=3.6) 2026-03-04T20:17:20,547 Found link https://files.pythonhosted.org/packages/d5/87/1b1a469eb89935f0b8df90b610d2b31b7c52749e0c20378cde95b5e20774/orange3_singlecell-1.7.0.tar.gz (from https://pypi.org/simple/orange3-singlecell/) (requires-python:>=3.6), version: 1.7.0 2026-03-04T20:17:20,548 Skipping link: No binaries permitted for orange3-singlecell: https://files.pythonhosted.org/packages/c4/73/eb9681758ee2937d3f153179f862d995b576197f4c807e3cc79b9e90b218/Orange3_SingleCell-1.7.1-py3-none-any.whl (from https://pypi.org/simple/orange3-singlecell/) (requires-python:>=3.6) 2026-03-04T20:17:20,549 Found link https://files.pythonhosted.org/packages/f2/1f/43c56efa73dfd1e9c18ed46ef03ff24f00a1872a86d1d5cd8e9d9e009d7d/orange3_singlecell-1.7.1.tar.gz (from https://pypi.org/simple/orange3-singlecell/) (requires-python:>=3.6), version: 1.7.1 2026-03-04T20:17:20,550 Skipping link: No binaries permitted for orange3-singlecell: https://files.pythonhosted.org/packages/13/03/b0ca0be1c9a5405de2546f3b85ee04ade001005d035a04711ff5f2d04760/Orange3_SingleCell-1.7.2-py3-none-any.whl (from https://pypi.org/simple/orange3-singlecell/) (requires-python:>=3.6) 2026-03-04T20:17:20,551 Found link https://files.pythonhosted.org/packages/72/85/0f6f5b459853b3755f25c82b519f313235de010730c1550abd40e5d585cc/orange3_singlecell-1.7.2.tar.gz (from https://pypi.org/simple/orange3-singlecell/) (requires-python:>=3.6), version: 1.7.2 2026-03-04T20:17:20,551 Skipping link: No binaries permitted for orange3-singlecell: https://files.pythonhosted.org/packages/76/99/97056cd0fcafa00400d5ec12d58cb1d4510d1ea8a527b1749a6512b7d613/orange3_singlecell-1.7.3-py3-none-any.whl (from https://pypi.org/simple/orange3-singlecell/) (requires-python:>=3.6) 2026-03-04T20:17:20,552 Found link https://files.pythonhosted.org/packages/cd/47/7abd3e12870ebb7e23f20e19689c6499b0e704a0c52af492a5a97dc721ec/orange3_singlecell-1.7.3.tar.gz (from https://pypi.org/simple/orange3-singlecell/) (requires-python:>=3.6), version: 1.7.3 2026-03-04T20:17:20,554 Skipping link: No binaries permitted for orange3-singlecell: https://files.pythonhosted.org/packages/ad/6a/b6c584062e51e4c3fbfc1d183c5e5a75d54e099db9300bc39f5b24d9c943/orange3_singlecell-1.7.4-py3-none-any.whl (from https://pypi.org/simple/orange3-singlecell/) (requires-python:>=3.6) 2026-03-04T20:17:20,554 Found link https://files.pythonhosted.org/packages/ec/71/5eb827fa62ac413a9b3af817083fcd8ed0e391b0d07cb73a4bd2d05f7a66/orange3_singlecell-1.7.4.tar.gz (from https://pypi.org/simple/orange3-singlecell/) (requires-python:>=3.6), version: 1.7.4 2026-03-04T20:17:20,555 Fetching project page and analyzing links: https://www.piwheels.org/simple/orange3-singlecell/ 2026-03-04T20:17:20,556 Getting page https://www.piwheels.org/simple/orange3-singlecell/ 2026-03-04T20:17:20,557 Found index url https://www.piwheels.org/simple 2026-03-04T20:17:20,710 Fetched page https://www.piwheels.org/simple/orange3-singlecell/ as text/html 2026-03-04T20:17:20,716 Skipping link: No binaries permitted for orange3-singlecell: https://archive1.piwheels.org/simple/orange3-singlecell/orange3_singlecell-1.7.3-py3-none-any.whl#sha256=f2d7210573c7810471438db7cca23f94cad890e96e98f56d7bac5b50d3899da4 (from https://www.piwheels.org/simple/orange3-singlecell/) (requires-python:>=3.6) 2026-03-04T20:17:20,716 Skipping link: No binaries permitted for orange3-singlecell: https://archive1.piwheels.org/simple/orange3-singlecell/Orange3_SingleCell-1.7.2-py3-none-any.whl#sha256=2ee3aad8c70a47501888cf554a76ef27bb55cc08954903e5651bcaa046f492d1 (from https://www.piwheels.org/simple/orange3-singlecell/) (requires-python:>=3.6) 2026-03-04T20:17:20,717 Skipping link: No binaries permitted for orange3-singlecell: https://archive1.piwheels.org/simple/orange3-singlecell/Orange3_SingleCell-1.7.1-py3-none-any.whl#sha256=8da2ba6adb3e7e5598b545fb214f2ac0047cd44aaa6bbdacab2c6cf792ab0521 (from https://www.piwheels.org/simple/orange3-singlecell/) (requires-python:>=3.6) 2026-03-04T20:17:20,717 Skipping link: No binaries permitted for orange3-singlecell: https://archive1.piwheels.org/simple/orange3-singlecell/Orange3_SingleCell-1.7.0-py3-none-any.whl#sha256=50f0a0c53df40f2317a673a2dccf590ac849182eaf1c27fc11cd22011cc48eae (from https://www.piwheels.org/simple/orange3-singlecell/) (requires-python:>=3.6) 2026-03-04T20:17:20,718 Skipping link: No binaries permitted for orange3-singlecell: https://archive1.piwheels.org/simple/orange3-singlecell/Orange3_SingleCell-1.6.0-py3-none-any.whl#sha256=ffdee9a23abbf2afa22172aed81c030fd637c04879568bf148dc284894c1f050 (from https://www.piwheels.org/simple/orange3-singlecell/) (requires-python:>=3.6) 2026-03-04T20:17:20,719 Skipping link: No binaries permitted for orange3-singlecell: https://archive1.piwheels.org/simple/orange3-singlecell/Orange3_SingleCell-1.5.0-py3-none-any.whl#sha256=679bb4410d23c305025726b5566d50cb102d9dcf9dece9c6440c41c98f34ab68 (from https://www.piwheels.org/simple/orange3-singlecell/) (requires-python:>=3.6) 2026-03-04T20:17:20,719 Skipping link: No binaries permitted for orange3-singlecell: https://archive1.piwheels.org/simple/orange3-singlecell/Orange3_SingleCell-1.4.0-py3-none-any.whl#sha256=ee40ad9ae8e46f60a4f51b86ef07dcaeac5391f1e39ed564bee1bf4436d7f95d (from https://www.piwheels.org/simple/orange3-singlecell/) (requires-python:>=3.6) 2026-03-04T20:17:20,720 Skipping link: No binaries permitted for orange3-singlecell: https://archive1.piwheels.org/simple/orange3-singlecell/Orange3_SingleCell-1.3.0-py3-none-any.whl#sha256=35c1d357dc17b5dfc75411f43e1da47763253f1286d9444894133c6cd3b4f405 (from https://www.piwheels.org/simple/orange3-singlecell/) (requires-python:>=3.6) 2026-03-04T20:17:20,720 Skipping link: No binaries permitted for orange3-singlecell: https://archive1.piwheels.org/simple/orange3-singlecell/Orange3_SingleCell-1.2.0-py3-none-any.whl#sha256=1b1af16389f98cf31245ae881e9e34a278f9471edb9d0e35245a93229ca805c7 (from https://www.piwheels.org/simple/orange3-singlecell/) (requires-python:>=3.6) 2026-03-04T20:17:20,721 Skipping link: No binaries permitted for orange3-singlecell: https://archive1.piwheels.org/simple/orange3-singlecell/Orange3_SingleCell-1.1.0-py3-none-any.whl#sha256=df867ea07d049d0ce1dbb85b9780c70d50e109587590b7a02739747f92658b44 (from https://www.piwheels.org/simple/orange3-singlecell/) 2026-03-04T20:17:20,722 Skipping link: No binaries permitted for orange3-singlecell: https://archive1.piwheels.org/simple/orange3-singlecell/Orange3_SingleCell-1.0.0-py3-none-any.whl#sha256=f2846acab85ad1dc34638d1b784a37e2c9c2c66041833334cc253d96fd7e57ae (from https://www.piwheels.org/simple/orange3-singlecell/) 2026-03-04T20:17:20,722 Skipping link: No binaries permitted for orange3-singlecell: https://archive1.piwheels.org/simple/orange3-singlecell/Orange3_SingleCell-0.9.5-py3-none-any.whl#sha256=0d0478042b83eed708e02cdf9337d0b8e3685632738ade998595015b8acaa989 (from https://www.piwheels.org/simple/orange3-singlecell/) 2026-03-04T20:17:20,723 Skipping link: No binaries permitted for orange3-singlecell: https://archive1.piwheels.org/simple/orange3-singlecell/Orange3_SingleCell-0.9.1-py3-none-any.whl#sha256=517005c2ae19f73119ce95dc7047dcd26655fe743c057b1efa429a97da3654d4 (from https://www.piwheels.org/simple/orange3-singlecell/) 2026-03-04T20:17:20,723 Skipping link: No binaries permitted for orange3-singlecell: https://archive1.piwheels.org/simple/orange3-singlecell/Orange3_SingleCell-0.9.0-py3-none-any.whl#sha256=698da6cc3ec4ab8d8e315726dd8d17025e644a02c1b5ae95a58ab37325b6f28f (from https://www.piwheels.org/simple/orange3-singlecell/) 2026-03-04T20:17:20,724 Skipping link: No binaries permitted for orange3-singlecell: https://archive1.piwheels.org/simple/orange3-singlecell/Orange3_SingleCell-0.8.2-py3-none-any.whl#sha256=77220d3293b3c4db61349d2bec1fbe95f0dc663fb31bd7ad4943942350ca72df (from https://www.piwheels.org/simple/orange3-singlecell/) 2026-03-04T20:17:20,724 Skipping link: No binaries permitted for orange3-singlecell: https://archive1.piwheels.org/simple/orange3-singlecell/Orange3_SingleCell-0.8.1-py3-none-any.whl#sha256=98475e522fb1f37626bdbd1bd5e1265e81180bd57ed6857f58afe58015b1e70c (from https://www.piwheels.org/simple/orange3-singlecell/) 2026-03-04T20:17:20,725 Skipping link: not a file: https://www.piwheels.org/simple/orange3-singlecell/ 2026-03-04T20:17:20,726 Skipping link: not a file: https://pypi.org/simple/orange3-singlecell/ 2026-03-04T20:17:20,747 Given no hashes to check 1 links for project 'orange3-singlecell': discarding no candidates 2026-03-04T20:17:20,765 Collecting orange3-singlecell==1.7.4 2026-03-04T20:17:20,768 Created temporary directory: /tmp/pip-unpack-htolwrp6 2026-03-04T20:17:20,902 Downloading orange3_singlecell-1.7.4.tar.gz (2.6 MB) 2026-03-04T20:17:21,908 Added orange3-singlecell==1.7.4 from https://files.pythonhosted.org/packages/ec/71/5eb827fa62ac413a9b3af817083fcd8ed0e391b0d07cb73a4bd2d05f7a66/orange3_singlecell-1.7.4.tar.gz to build tracker '/tmp/pip-build-tracker-sphzqp6f' 2026-03-04T20:17:21,912 Created temporary directory: /tmp/pip-build-env-jzvtsjzl 2026-03-04T20:17:21,917 Installing build dependencies: started 2026-03-04T20:17:21,918 Running command pip subprocess to install build dependencies 2026-03-04T20:17:23,060 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-03-04T20:17:23,673 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-03-04T20:17:23,697 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-03-04T20:17:25,447 Collecting setuptools 2026-03-04T20:17:25,539 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.0-py3-none-any.whl (1.0 MB) 2026-03-04T20:17:25,952 Collecting setuptools-scm 2026-03-04T20:17:25,971 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-9.2.2-py3-none-any.whl (62 kB) 2026-03-04T20:17:26,236 Collecting wheel 2026-03-04T20:17:26,252 Using cached https://www.piwheels.org/simple/wheel/wheel-0.46.3-py3-none-any.whl (30 kB) 2026-03-04T20:17:26,449 Collecting packaging>=20 2026-03-04T20:17:26,465 Using cached https://www.piwheels.org/simple/packaging/packaging-26.0-py3-none-any.whl (74 kB) 2026-03-04T20:17:29,435 Installing collected packages: setuptools, packaging, wheel, setuptools-scm 2026-03-04T20:17:32,907 Creating /tmp/pip-build-env-jzvtsjzl/overlay/local/bin 2026-03-04T20:17:32,909 changing mode of /tmp/pip-build-env-jzvtsjzl/overlay/local/bin/wheel to 755 2026-03-04T20:17:33,179 changing mode of /tmp/pip-build-env-jzvtsjzl/overlay/local/bin/setuptools-scm to 755 2026-03-04T20:17:33,218 Successfully installed packaging-26.0 setuptools-82.0.0 setuptools-scm-9.2.2 wheel-0.46.3 2026-03-04T20:17:33,509 Installing build dependencies: finished with status 'done' 2026-03-04T20:17:33,515 Getting requirements to build wheel: started 2026-03-04T20:17:33,516 Running command Getting requirements to build wheel 2026-03-04T20:17:34,064 /tmp/pip-build-env-jzvtsjzl/overlay/local/lib/python3.11/dist-packages/setuptools/config/setupcfg.py:296: _DeprecatedConfig: Deprecated config in `setup.cfg` 2026-03-04T20:17:34,064 !! 2026-03-04T20:17:34,065 ******************************************************************************** 2026-03-04T20:17:34,065 The namespace_packages parameter is deprecated, consider using implicit namespaces instead (PEP 420). 2026-03-04T20:17:34,067 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2026-03-04T20:17:34,067 ******************************************************************************** 2026-03-04T20:17:34,068 !! 2026-03-04T20:17:34,069 parsed = self.parsers.get(option_name, lambda x: x)(value) 2026-03-04T20:17:34,161 Getting requirements to build wheel: finished with status 'done' 2026-03-04T20:17:34,185 Created temporary directory: /tmp/pip-modern-metadata-yta0z__p 2026-03-04T20:17:34,188 Preparing metadata (pyproject.toml): started 2026-03-04T20:17:34,189 Running command Preparing metadata (pyproject.toml) 2026-03-04T20:17:34,773 toml section missing PosixPath('pyproject.toml') does not contain a tool.setuptools_scm section 2026-03-04T20:17:34,797 toml section missing PosixPath('pyproject.toml') does not contain a tool.setuptools_scm section 2026-03-04T20:17:34,802 /tmp/pip-build-env-jzvtsjzl/overlay/local/lib/python3.11/dist-packages/setuptools/config/setupcfg.py:296: _DeprecatedConfig: Deprecated config in `setup.cfg` 2026-03-04T20:17:34,802 !! 2026-03-04T20:17:34,803 ******************************************************************************** 2026-03-04T20:17:34,804 The namespace_packages parameter is deprecated, consider using implicit namespaces instead (PEP 420). 2026-03-04T20:17:34,805 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2026-03-04T20:17:34,806 ******************************************************************************** 2026-03-04T20:17:34,807 !! 2026-03-04T20:17:34,807 parsed = self.parsers.get(option_name, lambda x: x)(value) 2026-03-04T20:17:34,840 running dist_info 2026-03-04T20:17:34,854 creating /tmp/pip-modern-metadata-yta0z__p/Orange3_SingleCell.egg-info 2026-03-04T20:17:34,855 writing /tmp/pip-modern-metadata-yta0z__p/Orange3_SingleCell.egg-info/PKG-INFO 2026-03-04T20:17:34,860 writing dependency_links to /tmp/pip-modern-metadata-yta0z__p/Orange3_SingleCell.egg-info/dependency_links.txt 2026-03-04T20:17:34,862 writing entry points to /tmp/pip-modern-metadata-yta0z__p/Orange3_SingleCell.egg-info/entry_points.txt 2026-03-04T20:17:34,863 writing namespace_packages to /tmp/pip-modern-metadata-yta0z__p/Orange3_SingleCell.egg-info/namespace_packages.txt 2026-03-04T20:17:34,865 writing requirements to /tmp/pip-modern-metadata-yta0z__p/Orange3_SingleCell.egg-info/requires.txt 2026-03-04T20:17:34,866 writing top-level names to /tmp/pip-modern-metadata-yta0z__p/Orange3_SingleCell.egg-info/top_level.txt 2026-03-04T20:17:34,868 writing manifest file '/tmp/pip-modern-metadata-yta0z__p/Orange3_SingleCell.egg-info/SOURCES.txt' 2026-03-04T20:17:34,930 listing git files failed - pretending there aren't any 2026-03-04T20:17:34,934 reading manifest file '/tmp/pip-modern-metadata-yta0z__p/Orange3_SingleCell.egg-info/SOURCES.txt' 2026-03-04T20:17:34,937 adding license file 'LICENSE' 2026-03-04T20:17:34,941 writing manifest file '/tmp/pip-modern-metadata-yta0z__p/Orange3_SingleCell.egg-info/SOURCES.txt' 2026-03-04T20:17:34,942 creating '/tmp/pip-modern-metadata-yta0z__p/orange3_singlecell-1.7.4.dist-info' 2026-03-04T20:17:35,078 Preparing metadata (pyproject.toml): finished with status 'done' 2026-03-04T20:17:35,083 Source in /tmp/pip-wheel-thk7ig3e/orange3-singlecell_1f84478591ab426a88467ec2b432dcd5 has version 1.7.4, which satisfies requirement orange3-singlecell==1.7.4 from https://files.pythonhosted.org/packages/ec/71/5eb827fa62ac413a9b3af817083fcd8ed0e391b0d07cb73a4bd2d05f7a66/orange3_singlecell-1.7.4.tar.gz 2026-03-04T20:17:35,084 Removed orange3-singlecell==1.7.4 from https://files.pythonhosted.org/packages/ec/71/5eb827fa62ac413a9b3af817083fcd8ed0e391b0d07cb73a4bd2d05f7a66/orange3_singlecell-1.7.4.tar.gz from build tracker '/tmp/pip-build-tracker-sphzqp6f' 2026-03-04T20:17:35,089 Created temporary directory: /tmp/pip-unpack-nqpp6s5m 2026-03-04T20:17:35,090 Building wheels for collected packages: orange3-singlecell 2026-03-04T20:17:35,094 Created temporary directory: /tmp/pip-wheel-20hjl_h6 2026-03-04T20:17:35,095 Destination directory: /tmp/pip-wheel-20hjl_h6 2026-03-04T20:17:35,097 Building wheel for orange3-singlecell (pyproject.toml): started 2026-03-04T20:17:35,099 Running command Building wheel for orange3-singlecell (pyproject.toml) 2026-03-04T20:17:35,668 toml section missing PosixPath('pyproject.toml') does not contain a tool.setuptools_scm section 2026-03-04T20:17:35,691 toml section missing PosixPath('pyproject.toml') does not contain a tool.setuptools_scm section 2026-03-04T20:17:35,695 /tmp/pip-build-env-jzvtsjzl/overlay/local/lib/python3.11/dist-packages/setuptools/config/setupcfg.py:296: _DeprecatedConfig: Deprecated config in `setup.cfg` 2026-03-04T20:17:35,695 !! 2026-03-04T20:17:35,696 ******************************************************************************** 2026-03-04T20:17:35,697 The namespace_packages parameter is deprecated, consider using implicit namespaces instead (PEP 420). 2026-03-04T20:17:35,698 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2026-03-04T20:17:35,698 ******************************************************************************** 2026-03-04T20:17:35,699 !! 2026-03-04T20:17:35,700 parsed = self.parsers.get(option_name, lambda x: x)(value) 2026-03-04T20:17:35,730 running bdist_wheel 2026-03-04T20:17:35,763 running build 2026-03-04T20:17:35,763 running build_py 2026-03-04T20:17:35,774 creating build/lib/orangecontrib 2026-03-04T20:17:35,776 copying orangecontrib/__init__.py -> build/lib/orangecontrib 2026-03-04T20:17:35,778 creating build/lib/orangecontrib/single_cell 2026-03-04T20:17:35,779 copying orangecontrib/single_cell/reader.py -> build/lib/orangecontrib/single_cell 2026-03-04T20:17:35,781 copying orangecontrib/single_cell/__init__.py -> build/lib/orangecontrib/single_cell 2026-03-04T20:17:35,784 creating build/lib/orangecontrib/single_cell/widgets 2026-03-04T20:17:35,785 copying orangecontrib/single_cell/widgets/owharmony.py -> build/lib/orangecontrib/single_cell/widgets 2026-03-04T20:17:35,788 copying orangecontrib/single_cell/widgets/owaligndatasets.py -> build/lib/orangecontrib/single_cell/widgets 2026-03-04T20:17:35,790 copying orangecontrib/single_cell/widgets/owloaddata.py -> build/lib/orangecontrib/single_cell/widgets 2026-03-04T20:17:35,793 copying orangecontrib/single_cell/widgets/contingency_table.py -> build/lib/orangecontrib/single_cell/widgets 2026-03-04T20:17:35,796 copying orangecontrib/single_cell/widgets/owbatchnorm.py -> build/lib/orangecontrib/single_cell/widgets 2026-03-04T20:17:35,798 copying orangecontrib/single_cell/widgets/owscorecells.py -> build/lib/orangecontrib/single_cell/widgets 2026-03-04T20:17:35,801 copying orangecontrib/single_cell/widgets/owdotmatrix.py -> build/lib/orangecontrib/single_cell/widgets 2026-03-04T20:17:35,803 copying orangecontrib/single_cell/widgets/load_data.py -> build/lib/orangecontrib/single_cell/widgets 2026-03-04T20:17:35,806 copying orangecontrib/single_cell/widgets/owdropout.py -> build/lib/orangecontrib/single_cell/widgets 2026-03-04T20:17:35,809 copying orangecontrib/single_cell/widgets/owfilter.py -> build/lib/orangecontrib/single_cell/widgets 2026-03-04T20:17:35,813 copying orangecontrib/single_cell/widgets/owscoregenes.py -> build/lib/orangecontrib/single_cell/widgets 2026-03-04T20:17:35,815 copying orangecontrib/single_cell/widgets/owspatialautocorrelation.py -> build/lib/orangecontrib/single_cell/widgets 2026-03-04T20:17:35,817 copying orangecontrib/single_cell/widgets/owmultisample.py -> build/lib/orangecontrib/single_cell/widgets 2026-03-04T20:17:35,820 copying orangecontrib/single_cell/widgets/owscpreprocess.py -> build/lib/orangecontrib/single_cell/widgets 2026-03-04T20:17:35,823 copying orangecontrib/single_cell/widgets/__init__.py -> build/lib/orangecontrib/single_cell/widgets 2026-03-04T20:17:35,825 copying orangecontrib/single_cell/widgets/owscdatasets.py -> build/lib/orangecontrib/single_cell/widgets 2026-03-04T20:17:35,827 creating build/lib/orangecontrib/single_cell/tests 2026-03-04T20:17:35,828 copying orangecontrib/single_cell/tests/test_owaligndatasets.py -> build/lib/orangecontrib/single_cell/tests 2026-03-04T20:17:35,830 copying orangecontrib/single_cell/tests/test_owgenerank.py -> build/lib/orangecontrib/single_cell/tests 2026-03-04T20:17:35,832 copying orangecontrib/single_cell/tests/test_owloaddata.py -> build/lib/orangecontrib/single_cell/tests 2026-03-04T20:17:35,835 copying orangecontrib/single_cell/tests/test_owscorecells.py -> build/lib/orangecontrib/single_cell/tests 2026-03-04T20:17:35,837 copying orangecontrib/single_cell/tests/test_owdropout.py -> build/lib/orangecontrib/single_cell/tests 2026-03-04T20:17:35,839 copying orangecontrib/single_cell/tests/test_owscpreprocess.py -> build/lib/orangecontrib/single_cell/tests 2026-03-04T20:17:35,842 copying orangecontrib/single_cell/tests/test_owfilter.py -> build/lib/orangecontrib/single_cell/tests 2026-03-04T20:17:35,843 copying orangecontrib/single_cell/tests/test_owscoregenes.py -> build/lib/orangecontrib/single_cell/tests 2026-03-04T20:17:35,845 copying orangecontrib/single_cell/tests/test_load_data.py -> build/lib/orangecontrib/single_cell/tests 2026-03-04T20:17:35,848 copying orangecontrib/single_cell/tests/test_owmultisample.py -> build/lib/orangecontrib/single_cell/tests 2026-03-04T20:17:35,850 copying orangecontrib/single_cell/tests/test_owspatialautocorrelation.py -> build/lib/orangecontrib/single_cell/tests 2026-03-04T20:17:35,852 copying orangecontrib/single_cell/tests/test_owdotmatrix.py -> build/lib/orangecontrib/single_cell/tests 2026-03-04T20:17:35,854 copying orangecontrib/single_cell/tests/test_owdatasets.py -> build/lib/orangecontrib/single_cell/tests 2026-03-04T20:17:35,856 copying orangecontrib/single_cell/tests/test_owbatchnorm.py -> build/lib/orangecontrib/single_cell/tests 2026-03-04T20:17:35,858 copying orangecontrib/single_cell/tests/__init__.py -> build/lib/orangecontrib/single_cell/tests 2026-03-04T20:17:35,860 creating build/lib/orangecontrib/single_cell/preprocess 2026-03-04T20:17:35,861 copying orangecontrib/single_cell/preprocess/cca.py -> build/lib/orangecontrib/single_cell/preprocess 2026-03-04T20:17:35,863 copying orangecontrib/single_cell/preprocess/scbnorm.py -> build/lib/orangecontrib/single_cell/preprocess 2026-03-04T20:17:35,866 copying orangecontrib/single_cell/preprocess/clusteranalysis.py -> build/lib/orangecontrib/single_cell/preprocess 2026-03-04T20:17:35,869 copying orangecontrib/single_cell/preprocess/alignment.py -> build/lib/orangecontrib/single_cell/preprocess 2026-03-04T20:17:35,871 copying orangecontrib/single_cell/preprocess/harmony_full_numpy.py -> build/lib/orangecontrib/single_cell/preprocess 2026-03-04T20:17:35,873 copying orangecontrib/single_cell/preprocess/harmony_preprocess.py -> build/lib/orangecontrib/single_cell/preprocess 2026-03-04T20:17:35,875 copying orangecontrib/single_cell/preprocess/biweight.py -> build/lib/orangecontrib/single_cell/preprocess 2026-03-04T20:17:35,877 copying orangecontrib/single_cell/preprocess/scpreprocess.py -> build/lib/orangecontrib/single_cell/preprocess 2026-03-04T20:17:35,880 copying orangecontrib/single_cell/preprocess/__init__.py -> build/lib/orangecontrib/single_cell/preprocess 2026-03-04T20:17:35,882 creating build/lib/orangecontrib/single_cell/tests/preprocess 2026-03-04T20:17:35,884 copying orangecontrib/single_cell/tests/preprocess/test_scbnorm.py -> build/lib/orangecontrib/single_cell/tests/preprocess 2026-03-04T20:17:35,886 copying orangecontrib/single_cell/tests/preprocess/test_scpreprocess.py -> build/lib/orangecontrib/single_cell/tests/preprocess 2026-03-04T20:17:35,888 copying orangecontrib/single_cell/tests/preprocess/test_alignment.py -> build/lib/orangecontrib/single_cell/tests/preprocess 2026-03-04T20:17:35,890 copying orangecontrib/single_cell/tests/preprocess/test_cca.py -> build/lib/orangecontrib/single_cell/tests/preprocess 2026-03-04T20:17:35,892 copying orangecontrib/single_cell/tests/preprocess/__init__.py -> build/lib/orangecontrib/single_cell/tests/preprocess 2026-03-04T20:17:35,893 running egg_info 2026-03-04T20:17:35,906 writing Orange3_SingleCell.egg-info/PKG-INFO 2026-03-04T20:17:35,910 writing dependency_links to Orange3_SingleCell.egg-info/dependency_links.txt 2026-03-04T20:17:35,912 writing entry points to Orange3_SingleCell.egg-info/entry_points.txt 2026-03-04T20:17:35,913 writing namespace_packages to Orange3_SingleCell.egg-info/namespace_packages.txt 2026-03-04T20:17:35,916 writing requirements to Orange3_SingleCell.egg-info/requires.txt 2026-03-04T20:17:35,917 writing top-level names to Orange3_SingleCell.egg-info/top_level.txt 2026-03-04T20:17:35,957 listing git files failed - pretending there aren't any 2026-03-04T20:17:35,962 reading manifest file 'Orange3_SingleCell.egg-info/SOURCES.txt' 2026-03-04T20:17:35,988 adding license file 'LICENSE' 2026-03-04T20:17:35,996 writing manifest file 'Orange3_SingleCell.egg-info/SOURCES.txt' 2026-03-04T20:17:36,000 /tmp/pip-build-env-jzvtsjzl/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'orangecontrib.single_cell.preprocess.data' is absent from the `packages` configuration. 2026-03-04T20:17:36,001 !! 2026-03-04T20:17:36,002 ******************************************************************************** 2026-03-04T20:17:36,002 ############################ 2026-03-04T20:17:36,003 # Package would be ignored # 2026-03-04T20:17:36,003 ############################ 2026-03-04T20:17:36,004 Python recognizes 'orangecontrib.single_cell.preprocess.data' as an importable package[^1], 2026-03-04T20:17:36,005 but it is absent from setuptools' `packages` configuration. 2026-03-04T20:17:36,006 This leads to an ambiguous overall configuration. If you want to distribute this 2026-03-04T20:17:36,006 package, please make sure that 'orangecontrib.single_cell.preprocess.data' is explicitly added 2026-03-04T20:17:36,007 to the `packages` configuration field. 2026-03-04T20:17:36,008 Alternatively, you can also rely on setuptools' discovery methods 2026-03-04T20:17:36,009 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-03-04T20:17:36,009 instead of `find_packages(...)`/`find:`). 2026-03-04T20:17:36,010 You can read more about "package discovery" on setuptools documentation page: 2026-03-04T20:17:36,010 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-03-04T20:17:36,011 If you don't want 'orangecontrib.single_cell.preprocess.data' to be distributed and are 2026-03-04T20:17:36,012 already explicitly excluding 'orangecontrib.single_cell.preprocess.data' via 2026-03-04T20:17:36,012 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-03-04T20:17:36,012 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-03-04T20:17:36,013 combination with a more fine grained `package-data` configuration. 2026-03-04T20:17:36,014 You can read more about "package data files" on setuptools documentation page: 2026-03-04T20:17:36,014 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-03-04T20:17:36,016 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-03-04T20:17:36,016 even if it does not contain any `.py` files. 2026-03-04T20:17:36,017 On the other hand, currently there is no concept of package data 2026-03-04T20:17:36,017 directory, all directories are treated like packages. 2026-03-04T20:17:36,018 ******************************************************************************** 2026-03-04T20:17:36,019 !! 2026-03-04T20:17:36,019 check.warn(importable) 2026-03-04T20:17:36,020 /tmp/pip-build-env-jzvtsjzl/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'orangecontrib.single_cell.tests.data' is absent from the `packages` configuration. 2026-03-04T20:17:36,020 !! 2026-03-04T20:17:36,021 ******************************************************************************** 2026-03-04T20:17:36,022 ############################ 2026-03-04T20:17:36,022 # Package would be ignored # 2026-03-04T20:17:36,023 ############################ 2026-03-04T20:17:36,023 Python recognizes 'orangecontrib.single_cell.tests.data' as an importable package[^1], 2026-03-04T20:17:36,024 but it is absent from setuptools' `packages` configuration. 2026-03-04T20:17:36,025 This leads to an ambiguous overall configuration. If you want to distribute this 2026-03-04T20:17:36,026 package, please make sure that 'orangecontrib.single_cell.tests.data' is explicitly added 2026-03-04T20:17:36,026 to the `packages` configuration field. 2026-03-04T20:17:36,027 Alternatively, you can also rely on setuptools' discovery methods 2026-03-04T20:17:36,028 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-03-04T20:17:36,028 instead of `find_packages(...)`/`find:`). 2026-03-04T20:17:36,029 You can read more about "package discovery" on setuptools documentation page: 2026-03-04T20:17:36,030 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-03-04T20:17:36,031 If you don't want 'orangecontrib.single_cell.tests.data' to be distributed and are 2026-03-04T20:17:36,032 already explicitly excluding 'orangecontrib.single_cell.tests.data' via 2026-03-04T20:17:36,033 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-03-04T20:17:36,033 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-03-04T20:17:36,034 combination with a more fine grained `package-data` configuration. 2026-03-04T20:17:36,035 You can read more about "package data files" on setuptools documentation page: 2026-03-04T20:17:36,036 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-03-04T20:17:36,037 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-03-04T20:17:36,038 even if it does not contain any `.py` files. 2026-03-04T20:17:36,038 On the other hand, currently there is no concept of package data 2026-03-04T20:17:36,039 directory, all directories are treated like packages. 2026-03-04T20:17:36,039 ******************************************************************************** 2026-03-04T20:17:36,040 !! 2026-03-04T20:17:36,041 check.warn(importable) 2026-03-04T20:17:36,041 /tmp/pip-build-env-jzvtsjzl/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'orangecontrib.single_cell.widgets.icons' is absent from the `packages` configuration. 2026-03-04T20:17:36,042 !! 2026-03-04T20:17:36,042 ******************************************************************************** 2026-03-04T20:17:36,043 ############################ 2026-03-04T20:17:36,043 # Package would be ignored # 2026-03-04T20:17:36,044 ############################ 2026-03-04T20:17:36,044 Python recognizes 'orangecontrib.single_cell.widgets.icons' as an importable package[^1], 2026-03-04T20:17:36,045 but it is absent from setuptools' `packages` configuration. 2026-03-04T20:17:36,046 This leads to an ambiguous overall configuration. If you want to distribute this 2026-03-04T20:17:36,046 package, please make sure that 'orangecontrib.single_cell.widgets.icons' is explicitly added 2026-03-04T20:17:36,047 to the `packages` configuration field. 2026-03-04T20:17:36,047 Alternatively, you can also rely on setuptools' discovery methods 2026-03-04T20:17:36,048 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-03-04T20:17:36,048 instead of `find_packages(...)`/`find:`). 2026-03-04T20:17:36,049 You can read more about "package discovery" on setuptools documentation page: 2026-03-04T20:17:36,050 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-03-04T20:17:36,051 If you don't want 'orangecontrib.single_cell.widgets.icons' to be distributed and are 2026-03-04T20:17:36,052 already explicitly excluding 'orangecontrib.single_cell.widgets.icons' via 2026-03-04T20:17:36,052 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-03-04T20:17:36,053 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-03-04T20:17:36,053 combination with a more fine grained `package-data` configuration. 2026-03-04T20:17:36,054 You can read more about "package data files" on setuptools documentation page: 2026-03-04T20:17:36,055 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-03-04T20:17:36,057 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-03-04T20:17:36,057 even if it does not contain any `.py` files. 2026-03-04T20:17:36,057 On the other hand, currently there is no concept of package data 2026-03-04T20:17:36,058 directory, all directories are treated like packages. 2026-03-04T20:17:36,058 ******************************************************************************** 2026-03-04T20:17:36,060 !! 2026-03-04T20:17:36,060 check.warn(importable) 2026-03-04T20:17:36,061 creating build/lib/orangecontrib/single_cell/widgets/icons 2026-03-04T20:17:36,061 copying orangecontrib/single_cell/widgets/icons/AlignDatasets.svg -> build/lib/orangecontrib/single_cell/widgets/icons 2026-03-04T20:17:36,062 copying orangecontrib/single_cell/widgets/icons/BatchEffectRemoval.svg -> build/lib/orangecontrib/single_cell/widgets/icons 2026-03-04T20:17:36,062 copying orangecontrib/single_cell/widgets/icons/Binarize.svg -> build/lib/orangecontrib/single_cell/widgets/icons 2026-03-04T20:17:36,063 copying orangecontrib/single_cell/widgets/icons/DotMatrix.svg -> build/lib/orangecontrib/single_cell/widgets/icons 2026-03-04T20:17:36,063 copying orangecontrib/single_cell/widgets/icons/Dropout.svg -> build/lib/orangecontrib/single_cell/widgets/icons 2026-03-04T20:17:36,063 copying orangecontrib/single_cell/widgets/icons/Filter.svg -> build/lib/orangecontrib/single_cell/widgets/icons 2026-03-04T20:17:36,064 copying orangecontrib/single_cell/widgets/icons/LoadData.svg -> build/lib/orangecontrib/single_cell/widgets/icons 2026-03-04T20:17:36,064 copying orangecontrib/single_cell/widgets/icons/LogarithmicScale.svg -> build/lib/orangecontrib/single_cell/widgets/icons 2026-03-04T20:17:36,065 copying orangecontrib/single_cell/widgets/icons/MarkerGenes.svg -> build/lib/orangecontrib/single_cell/widgets/icons 2026-03-04T20:17:36,065 copying orangecontrib/single_cell/widgets/icons/MultiSample.svg -> build/lib/orangecontrib/single_cell/widgets/icons 2026-03-04T20:17:36,065 copying orangecontrib/single_cell/widgets/icons/Normalize.svg -> build/lib/orangecontrib/single_cell/widgets/icons 2026-03-04T20:17:36,066 copying orangecontrib/single_cell/widgets/icons/Rank.svg -> build/lib/orangecontrib/single_cell/widgets/icons 2026-03-04T20:17:36,066 copying orangecontrib/single_cell/widgets/icons/ScoreCells.svg -> build/lib/orangecontrib/single_cell/widgets/icons 2026-03-04T20:17:36,067 copying orangecontrib/single_cell/widgets/icons/ScoreGenes.svg -> build/lib/orangecontrib/single_cell/widgets/icons 2026-03-04T20:17:36,067 copying orangecontrib/single_cell/widgets/icons/SelectGenes.svg -> build/lib/orangecontrib/single_cell/widgets/icons 2026-03-04T20:17:36,068 copying orangecontrib/single_cell/widgets/icons/SingleCellDatasets.svg -> build/lib/orangecontrib/single_cell/widgets/icons 2026-03-04T20:17:36,068 copying orangecontrib/single_cell/widgets/icons/SingleCellPreprocess.svg -> build/lib/orangecontrib/single_cell/widgets/icons 2026-03-04T20:17:36,069 copying orangecontrib/single_cell/widgets/icons/SpatialAutocorrelation.svg -> build/lib/orangecontrib/single_cell/widgets/icons 2026-03-04T20:17:36,069 copying orangecontrib/single_cell/widgets/icons/Standardize.svg -> build/lib/orangecontrib/single_cell/widgets/icons 2026-03-04T20:17:36,070 copying orangecontrib/single_cell/widgets/icons/VCFFile.svg -> build/lib/orangecontrib/single_cell/widgets/icons 2026-03-04T20:17:36,070 copying orangecontrib/single_cell/widgets/icons/category.svg -> build/lib/orangecontrib/single_cell/widgets/icons 2026-03-04T20:17:36,071 creating build/lib/orangecontrib/single_cell/tests/data 2026-03-04T20:17:36,072 copying orangecontrib/single_cell/tests/data/DATA_MATRIX_LOG_TPM.txt -> build/lib/orangecontrib/single_cell/tests/data 2026-03-04T20:17:36,074 copying orangecontrib/single_cell/tests/data/data.csv -> build/lib/orangecontrib/single_cell/tests/data 2026-03-04T20:17:36,076 copying orangecontrib/single_cell/tests/data/data.loom -> build/lib/orangecontrib/single_cell/tests/data 2026-03-04T20:17:36,079 copying orangecontrib/single_cell/tests/data/data.pkl -> build/lib/orangecontrib/single_cell/tests/data 2026-03-04T20:17:36,082 copying orangecontrib/single_cell/tests/data/data.txt.gz -> build/lib/orangecontrib/single_cell/tests/data 2026-03-04T20:17:36,084 copying orangecontrib/single_cell/tests/data/data.xls -> build/lib/orangecontrib/single_cell/tests/data 2026-03-04T20:17:36,087 copying orangecontrib/single_cell/tests/data/data.xlsx -> build/lib/orangecontrib/single_cell/tests/data 2026-03-04T20:17:36,089 copying orangecontrib/single_cell/tests/data/data_dense.h5ad -> build/lib/orangecontrib/single_cell/tests/data 2026-03-04T20:17:36,092 copying orangecontrib/single_cell/tests/data/data_sparse.h5ad -> build/lib/orangecontrib/single_cell/tests/data 2026-03-04T20:17:36,095 copying orangecontrib/single_cell/tests/data/dermatology.tab -> build/lib/orangecontrib/single_cell/tests/data 2026-03-04T20:17:36,098 copying orangecontrib/single_cell/tests/data/lib.cell.count -> build/lib/orangecontrib/single_cell/tests/data 2026-03-04T20:17:36,100 copying orangecontrib/single_cell/tests/data/lib.cell.meta -> build/lib/orangecontrib/single_cell/tests/data 2026-03-04T20:17:36,102 creating build/lib/orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-A 2026-03-04T20:17:36,104 copying orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-A/barcodes.tsv -> build/lib/orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-A 2026-03-04T20:17:36,106 copying orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-A/genes.tsv -> build/lib/orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-A 2026-03-04T20:17:36,109 copying orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-A/matrix.mtx -> build/lib/orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-A 2026-03-04T20:17:36,111 creating build/lib/orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-B 2026-03-04T20:17:36,112 copying orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-B/barcodes.tsv -> build/lib/orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-B 2026-03-04T20:17:36,115 copying orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-B/genes.tsv -> build/lib/orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-B 2026-03-04T20:17:36,117 copying orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-B/matrix.mtx -> build/lib/orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-B 2026-03-04T20:17:36,120 creating build/lib/orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-C 2026-03-04T20:17:36,121 copying orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-C/barcodes.tsv -> build/lib/orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-C 2026-03-04T20:17:36,123 copying orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-C/genes.tsv -> build/lib/orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-C 2026-03-04T20:17:36,127 copying orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-C/matrix.mtx -> build/lib/orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-C 2026-03-04T20:17:36,129 creating build/lib/orangecontrib/single_cell/tests/data/10x/hg19 2026-03-04T20:17:36,131 copying orangecontrib/single_cell/tests/data/10x/hg19/barcodes.tsv -> build/lib/orangecontrib/single_cell/tests/data/10x/hg19 2026-03-04T20:17:36,133 copying orangecontrib/single_cell/tests/data/10x/hg19/genes.tsv -> build/lib/orangecontrib/single_cell/tests/data/10x/hg19 2026-03-04T20:17:36,136 copying orangecontrib/single_cell/tests/data/10x/hg19/matrix.mtx -> build/lib/orangecontrib/single_cell/tests/data/10x/hg19 2026-03-04T20:17:36,138 creating build/lib/orangecontrib/single_cell/tests/data/10x/mm10 2026-03-04T20:17:36,139 copying orangecontrib/single_cell/tests/data/10x/mm10/barcodes.tsv -> build/lib/orangecontrib/single_cell/tests/data/10x/mm10 2026-03-04T20:17:36,142 copying orangecontrib/single_cell/tests/data/10x/mm10/genes.tsv -> build/lib/orangecontrib/single_cell/tests/data/10x/mm10 2026-03-04T20:17:36,144 copying orangecontrib/single_cell/tests/data/10x/mm10/matrix.mtx -> build/lib/orangecontrib/single_cell/tests/data/10x/mm10 2026-03-04T20:17:36,146 creating build/lib/orangecontrib/single_cell/preprocess/data 2026-03-04T20:17:36,147 copying orangecontrib/single_cell/preprocess/data/bone_marrow_louvain.pickle -> build/lib/orangecontrib/single_cell/preprocess/data 2026-03-04T20:17:36,355 installing to build/bdist.linux-armv7l/wheel 2026-03-04T20:17:36,356 running install 2026-03-04T20:17:36,379 running install_lib 2026-03-04T20:17:36,389 Skipping installation of build/bdist.linux-armv7l/wheel/./orangecontrib/__init__.py (namespace package) 2026-03-04T20:17:36,390 copying orangecontrib/single_cell/reader.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell 2026-03-04T20:17:36,394 copying orangecontrib/single_cell/__init__.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell 2026-03-04T20:17:36,396 copying orangecontrib/single_cell/widgets/owharmony.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/widgets 2026-03-04T20:17:36,399 copying orangecontrib/single_cell/widgets/owaligndatasets.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/widgets 2026-03-04T20:17:36,402 copying orangecontrib/single_cell/widgets/owloaddata.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/widgets 2026-03-04T20:17:36,405 copying orangecontrib/single_cell/widgets/contingency_table.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/widgets 2026-03-04T20:17:36,408 copying orangecontrib/single_cell/widgets/owbatchnorm.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/widgets 2026-03-04T20:17:36,411 copying orangecontrib/single_cell/widgets/owscorecells.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/widgets 2026-03-04T20:17:36,413 copying orangecontrib/single_cell/widgets/owdotmatrix.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/widgets 2026-03-04T20:17:36,416 copying orangecontrib/single_cell/widgets/load_data.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/widgets 2026-03-04T20:17:36,419 copying orangecontrib/single_cell/widgets/owdropout.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/widgets 2026-03-04T20:17:36,422 copying orangecontrib/single_cell/widgets/owfilter.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/widgets 2026-03-04T20:17:36,425 copying orangecontrib/single_cell/widgets/owscoregenes.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/widgets 2026-03-04T20:17:36,427 copying orangecontrib/single_cell/widgets/owspatialautocorrelation.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/widgets 2026-03-04T20:17:36,430 copying orangecontrib/single_cell/widgets/owmultisample.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/widgets 2026-03-04T20:17:36,433 copying orangecontrib/single_cell/widgets/owscpreprocess.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/widgets 2026-03-04T20:17:36,436 copying orangecontrib/single_cell/widgets/__init__.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/widgets 2026-03-04T20:17:36,438 copying orangecontrib/single_cell/widgets/owscdatasets.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/widgets 2026-03-04T20:17:36,441 copying orangecontrib/single_cell/widgets/icons/Dropout.svg -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/widgets/icons 2026-03-04T20:17:36,444 copying orangecontrib/single_cell/widgets/icons/VCFFile.svg -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/widgets/icons 2026-03-04T20:17:36,446 copying orangecontrib/single_cell/widgets/icons/ScoreCells.svg -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/widgets/icons 2026-03-04T20:17:36,448 copying orangecontrib/single_cell/widgets/icons/SingleCellDatasets.svg -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/widgets/icons 2026-03-04T20:17:36,450 copying orangecontrib/single_cell/widgets/icons/AlignDatasets.svg -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/widgets/icons 2026-03-04T20:17:36,452 copying orangecontrib/single_cell/widgets/icons/MarkerGenes.svg -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/widgets/icons 2026-03-04T20:17:36,455 copying orangecontrib/single_cell/widgets/icons/SpatialAutocorrelation.svg -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/widgets/icons 2026-03-04T20:17:36,457 copying orangecontrib/single_cell/widgets/icons/Rank.svg -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/widgets/icons 2026-03-04T20:17:36,459 copying orangecontrib/single_cell/widgets/icons/MultiSample.svg -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/widgets/icons 2026-03-04T20:17:36,461 copying orangecontrib/single_cell/widgets/icons/category.svg -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/widgets/icons 2026-03-04T20:17:36,463 copying orangecontrib/single_cell/widgets/icons/SingleCellPreprocess.svg -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/widgets/icons 2026-03-04T20:17:36,465 copying orangecontrib/single_cell/widgets/icons/LogarithmicScale.svg -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/widgets/icons 2026-03-04T20:17:36,467 copying orangecontrib/single_cell/widgets/icons/DotMatrix.svg -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/widgets/icons 2026-03-04T20:17:36,469 copying orangecontrib/single_cell/widgets/icons/Standardize.svg -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/widgets/icons 2026-03-04T20:17:36,471 copying orangecontrib/single_cell/widgets/icons/Normalize.svg -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/widgets/icons 2026-03-04T20:17:36,473 copying orangecontrib/single_cell/widgets/icons/BatchEffectRemoval.svg -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/widgets/icons 2026-03-04T20:17:36,475 copying orangecontrib/single_cell/widgets/icons/Binarize.svg -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/widgets/icons 2026-03-04T20:17:36,479 copying orangecontrib/single_cell/widgets/icons/SelectGenes.svg -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/widgets/icons 2026-03-04T20:17:36,482 copying orangecontrib/single_cell/widgets/icons/LoadData.svg -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/widgets/icons 2026-03-04T20:17:36,483 copying orangecontrib/single_cell/widgets/icons/Filter.svg -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/widgets/icons 2026-03-04T20:17:36,485 copying orangecontrib/single_cell/widgets/icons/ScoreGenes.svg -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/widgets/icons 2026-03-04T20:17:36,488 copying orangecontrib/single_cell/tests/test_owaligndatasets.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests 2026-03-04T20:17:36,490 copying orangecontrib/single_cell/tests/test_owgenerank.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests 2026-03-04T20:17:36,493 copying orangecontrib/single_cell/tests/test_owloaddata.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests 2026-03-04T20:17:36,496 copying orangecontrib/single_cell/tests/test_owscorecells.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests 2026-03-04T20:17:36,498 copying orangecontrib/single_cell/tests/test_owdropout.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests 2026-03-04T20:17:36,501 copying orangecontrib/single_cell/tests/test_owscpreprocess.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests 2026-03-04T20:17:36,504 copying orangecontrib/single_cell/tests/test_owfilter.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests 2026-03-04T20:17:36,507 copying orangecontrib/single_cell/tests/test_owscoregenes.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests 2026-03-04T20:17:36,509 copying orangecontrib/single_cell/tests/test_load_data.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests 2026-03-04T20:17:36,512 copying orangecontrib/single_cell/tests/test_owmultisample.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests 2026-03-04T20:17:36,515 copying orangecontrib/single_cell/tests/test_owspatialautocorrelation.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests 2026-03-04T20:17:36,517 copying orangecontrib/single_cell/tests/test_owdotmatrix.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests 2026-03-04T20:17:36,520 copying orangecontrib/single_cell/tests/test_owdatasets.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests 2026-03-04T20:17:36,523 copying orangecontrib/single_cell/tests/test_owbatchnorm.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests 2026-03-04T20:17:36,525 copying orangecontrib/single_cell/tests/__init__.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests 2026-03-04T20:17:36,528 copying orangecontrib/single_cell/tests/data/data.csv -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests/data 2026-03-04T20:17:36,531 copying orangecontrib/single_cell/tests/data/data_sparse.h5ad -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests/data 2026-03-04T20:17:36,534 copying orangecontrib/single_cell/tests/data/data.xlsx -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests/data 2026-03-04T20:17:36,537 copying orangecontrib/single_cell/tests/data/lib.cell.count -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests/data 2026-03-04T20:17:36,540 copying orangecontrib/single_cell/tests/data/data_dense.h5ad -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests/data 2026-03-04T20:17:36,543 copying orangecontrib/single_cell/tests/data/data.loom -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests/data 2026-03-04T20:17:36,546 copying orangecontrib/single_cell/tests/data/data.txt.gz -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests/data 2026-03-04T20:17:36,548 copying orangecontrib/single_cell/tests/data/data.pkl -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests/data 2026-03-04T20:17:36,551 copying orangecontrib/single_cell/tests/data/dermatology.tab -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests/data 2026-03-04T20:17:36,554 copying orangecontrib/single_cell/tests/data/DATA_MATRIX_LOG_TPM.txt -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests/data 2026-03-04T20:17:36,556 copying orangecontrib/single_cell/tests/data/lib.cell.meta -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests/data 2026-03-04T20:17:36,559 copying orangecontrib/single_cell/tests/data/data.xls -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests/data 2026-03-04T20:17:36,563 copying orangecontrib/single_cell/tests/data/10x/mm10/barcodes.tsv -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests/data/10x/mm10 2026-03-04T20:17:36,566 copying orangecontrib/single_cell/tests/data/10x/mm10/genes.tsv -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests/data/10x/mm10 2026-03-04T20:17:36,568 copying orangecontrib/single_cell/tests/data/10x/mm10/matrix.mtx -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests/data/10x/mm10 2026-03-04T20:17:36,571 copying orangecontrib/single_cell/tests/data/10x/hg19/barcodes.tsv -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests/data/10x/hg19 2026-03-04T20:17:36,574 copying orangecontrib/single_cell/tests/data/10x/hg19/genes.tsv -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests/data/10x/hg19 2026-03-04T20:17:36,576 copying orangecontrib/single_cell/tests/data/10x/hg19/matrix.mtx -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests/data/10x/hg19 2026-03-04T20:17:36,580 copying orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-B/barcodes.tsv -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-B 2026-03-04T20:17:36,583 copying orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-B/genes.tsv -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-B 2026-03-04T20:17:36,586 copying orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-B/matrix.mtx -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-B 2026-03-04T20:17:36,589 copying orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-A/barcodes.tsv -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-A 2026-03-04T20:17:36,592 copying orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-A/genes.tsv -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-A 2026-03-04T20:17:36,595 copying orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-A/matrix.mtx -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-A 2026-03-04T20:17:36,598 copying orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-C/barcodes.tsv -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-C 2026-03-04T20:17:36,601 copying orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-C/genes.tsv -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-C 2026-03-04T20:17:36,604 copying orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-C/matrix.mtx -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-C 2026-03-04T20:17:36,607 copying orangecontrib/single_cell/tests/preprocess/test_scbnorm.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests/preprocess 2026-03-04T20:17:36,611 copying orangecontrib/single_cell/tests/preprocess/test_scpreprocess.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests/preprocess 2026-03-04T20:17:36,614 copying orangecontrib/single_cell/tests/preprocess/test_alignment.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests/preprocess 2026-03-04T20:17:36,616 copying orangecontrib/single_cell/tests/preprocess/test_cca.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests/preprocess 2026-03-04T20:17:36,618 copying orangecontrib/single_cell/tests/preprocess/__init__.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/tests/preprocess 2026-03-04T20:17:36,621 copying orangecontrib/single_cell/preprocess/cca.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/preprocess 2026-03-04T20:17:36,624 copying orangecontrib/single_cell/preprocess/scbnorm.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/preprocess 2026-03-04T20:17:36,627 copying orangecontrib/single_cell/preprocess/clusteranalysis.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/preprocess 2026-03-04T20:17:36,630 copying orangecontrib/single_cell/preprocess/alignment.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/preprocess 2026-03-04T20:17:36,633 copying orangecontrib/single_cell/preprocess/harmony_full_numpy.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/preprocess 2026-03-04T20:17:36,635 copying orangecontrib/single_cell/preprocess/harmony_preprocess.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/preprocess 2026-03-04T20:17:36,638 copying orangecontrib/single_cell/preprocess/biweight.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/preprocess 2026-03-04T20:17:36,641 copying orangecontrib/single_cell/preprocess/scpreprocess.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/preprocess 2026-03-04T20:17:36,644 copying orangecontrib/single_cell/preprocess/__init__.py -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/preprocess 2026-03-04T20:17:36,647 copying orangecontrib/single_cell/preprocess/data/bone_marrow_louvain.pickle -> build/bdist.linux-armv7l/wheel/./orangecontrib/single_cell/preprocess/data 2026-03-04T20:17:36,773 running install_egg_info 2026-03-04T20:17:36,786 Copying Orange3_SingleCell.egg-info to build/bdist.linux-armv7l/wheel/./Orange3_SingleCell-1.7.4-py3.11.egg-info 2026-03-04T20:17:36,804 Installing build/bdist.linux-armv7l/wheel/./Orange3_SingleCell-1.7.4-py3.11-nspkg.pth 2026-03-04T20:17:36,806 running install_scripts 2026-03-04T20:17:36,822 creating build/bdist.linux-armv7l/wheel/orange3_singlecell-1.7.4.dist-info/WHEEL 2026-03-04T20:17:36,826 creating '/tmp/pip-wheel-20hjl_h6/.tmp-5qvwnblc/orange3_singlecell-1.7.4-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-03-04T20:17:36,828 adding 'Orange3_SingleCell-1.7.4-py3.11-nspkg.pth' 2026-03-04T20:17:36,832 adding 'orange3_singlecell-1.7.4.dist-info/licenses/LICENSE' 2026-03-04T20:17:36,834 adding 'orangecontrib/single_cell/__init__.py' 2026-03-04T20:17:36,836 adding 'orangecontrib/single_cell/reader.py' 2026-03-04T20:17:36,839 adding 'orangecontrib/single_cell/preprocess/__init__.py' 2026-03-04T20:17:36,841 adding 'orangecontrib/single_cell/preprocess/alignment.py' 2026-03-04T20:17:36,846 adding 'orangecontrib/single_cell/preprocess/biweight.py' 2026-03-04T20:17:36,849 adding 'orangecontrib/single_cell/preprocess/cca.py' 2026-03-04T20:17:36,852 adding 'orangecontrib/single_cell/preprocess/clusteranalysis.py' 2026-03-04T20:17:36,855 adding 'orangecontrib/single_cell/preprocess/harmony_full_numpy.py' 2026-03-04T20:17:36,856 adding 'orangecontrib/single_cell/preprocess/harmony_preprocess.py' 2026-03-04T20:17:36,858 adding 'orangecontrib/single_cell/preprocess/scbnorm.py' 2026-03-04T20:17:36,860 adding 'orangecontrib/single_cell/preprocess/scpreprocess.py' 2026-03-04T20:17:37,115 adding 'orangecontrib/single_cell/preprocess/data/bone_marrow_louvain.pickle' 2026-03-04T20:17:37,168 adding 'orangecontrib/single_cell/tests/__init__.py' 2026-03-04T20:17:37,169 adding 'orangecontrib/single_cell/tests/test_load_data.py' 2026-03-04T20:17:37,171 adding 'orangecontrib/single_cell/tests/test_owaligndatasets.py' 2026-03-04T20:17:37,172 adding 'orangecontrib/single_cell/tests/test_owbatchnorm.py' 2026-03-04T20:17:37,173 adding 'orangecontrib/single_cell/tests/test_owdatasets.py' 2026-03-04T20:17:37,175 adding 'orangecontrib/single_cell/tests/test_owdotmatrix.py' 2026-03-04T20:17:37,176 adding 'orangecontrib/single_cell/tests/test_owdropout.py' 2026-03-04T20:17:37,178 adding 'orangecontrib/single_cell/tests/test_owfilter.py' 2026-03-04T20:17:37,179 adding 'orangecontrib/single_cell/tests/test_owgenerank.py' 2026-03-04T20:17:37,181 adding 'orangecontrib/single_cell/tests/test_owloaddata.py' 2026-03-04T20:17:37,183 adding 'orangecontrib/single_cell/tests/test_owmultisample.py' 2026-03-04T20:17:37,184 adding 'orangecontrib/single_cell/tests/test_owscorecells.py' 2026-03-04T20:17:37,185 adding 'orangecontrib/single_cell/tests/test_owscoregenes.py' 2026-03-04T20:17:37,187 adding 'orangecontrib/single_cell/tests/test_owscpreprocess.py' 2026-03-04T20:17:37,188 adding 'orangecontrib/single_cell/tests/test_owspatialautocorrelation.py' 2026-03-04T20:17:37,190 adding 'orangecontrib/single_cell/tests/data/DATA_MATRIX_LOG_TPM.txt' 2026-03-04T20:17:37,191 adding 'orangecontrib/single_cell/tests/data/data.csv' 2026-03-04T20:17:37,193 adding 'orangecontrib/single_cell/tests/data/data.loom' 2026-03-04T20:17:37,195 adding 'orangecontrib/single_cell/tests/data/data.pkl' 2026-03-04T20:17:37,196 adding 'orangecontrib/single_cell/tests/data/data.txt.gz' 2026-03-04T20:17:37,199 adding 'orangecontrib/single_cell/tests/data/data.xls' 2026-03-04T20:17:37,201 adding 'orangecontrib/single_cell/tests/data/data.xlsx' 2026-03-04T20:17:37,203 adding 'orangecontrib/single_cell/tests/data/data_dense.h5ad' 2026-03-04T20:17:37,205 adding 'orangecontrib/single_cell/tests/data/data_sparse.h5ad' 2026-03-04T20:17:37,210 adding 'orangecontrib/single_cell/tests/data/dermatology.tab' 2026-03-04T20:17:37,212 adding 'orangecontrib/single_cell/tests/data/lib.cell.count' 2026-03-04T20:17:37,213 adding 'orangecontrib/single_cell/tests/data/lib.cell.meta' 2026-03-04T20:17:37,215 adding 'orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-A/barcodes.tsv' 2026-03-04T20:17:37,218 adding 'orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-A/genes.tsv' 2026-03-04T20:17:37,221 adding 'orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-A/matrix.mtx' 2026-03-04T20:17:37,223 adding 'orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-B/barcodes.tsv' 2026-03-04T20:17:37,225 adding 'orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-B/genes.tsv' 2026-03-04T20:17:37,228 adding 'orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-B/matrix.mtx' 2026-03-04T20:17:37,230 adding 'orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-C/barcodes.tsv' 2026-03-04T20:17:37,232 adding 'orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-C/genes.tsv' 2026-03-04T20:17:37,235 adding 'orangecontrib/single_cell/tests/data/010-Showcase-LoadDataM-Data/batch-C/matrix.mtx' 2026-03-04T20:17:37,237 adding 'orangecontrib/single_cell/tests/data/10x/hg19/barcodes.tsv' 2026-03-04T20:17:37,238 adding 'orangecontrib/single_cell/tests/data/10x/hg19/genes.tsv' 2026-03-04T20:17:37,239 adding 'orangecontrib/single_cell/tests/data/10x/hg19/matrix.mtx' 2026-03-04T20:17:37,241 adding 'orangecontrib/single_cell/tests/data/10x/mm10/barcodes.tsv' 2026-03-04T20:17:37,242 adding 'orangecontrib/single_cell/tests/data/10x/mm10/genes.tsv' 2026-03-04T20:17:37,243 adding 'orangecontrib/single_cell/tests/data/10x/mm10/matrix.mtx' 2026-03-04T20:17:37,245 adding 'orangecontrib/single_cell/tests/preprocess/__init__.py' 2026-03-04T20:17:37,246 adding 'orangecontrib/single_cell/tests/preprocess/test_alignment.py' 2026-03-04T20:17:37,248 adding 'orangecontrib/single_cell/tests/preprocess/test_cca.py' 2026-03-04T20:17:37,249 adding 'orangecontrib/single_cell/tests/preprocess/test_scbnorm.py' 2026-03-04T20:17:37,251 adding 'orangecontrib/single_cell/tests/preprocess/test_scpreprocess.py' 2026-03-04T20:17:37,253 adding 'orangecontrib/single_cell/widgets/__init__.py' 2026-03-04T20:17:37,255 adding 'orangecontrib/single_cell/widgets/contingency_table.py' 2026-03-04T20:17:37,259 adding 'orangecontrib/single_cell/widgets/load_data.py' 2026-03-04T20:17:37,262 adding 'orangecontrib/single_cell/widgets/owaligndatasets.py' 2026-03-04T20:17:37,264 adding 'orangecontrib/single_cell/widgets/owbatchnorm.py' 2026-03-04T20:17:37,267 adding 'orangecontrib/single_cell/widgets/owdotmatrix.py' 2026-03-04T20:17:37,269 adding 'orangecontrib/single_cell/widgets/owdropout.py' 2026-03-04T20:17:37,274 adding 'orangecontrib/single_cell/widgets/owfilter.py' 2026-03-04T20:17:37,276 adding 'orangecontrib/single_cell/widgets/owharmony.py' 2026-03-04T20:17:37,279 adding 'orangecontrib/single_cell/widgets/owloaddata.py' 2026-03-04T20:17:37,282 adding 'orangecontrib/single_cell/widgets/owmultisample.py' 2026-03-04T20:17:37,283 adding 'orangecontrib/single_cell/widgets/owscdatasets.py' 2026-03-04T20:17:37,285 adding 'orangecontrib/single_cell/widgets/owscorecells.py' 2026-03-04T20:17:37,289 adding 'orangecontrib/single_cell/widgets/owscoregenes.py' 2026-03-04T20:17:37,292 adding 'orangecontrib/single_cell/widgets/owscpreprocess.py' 2026-03-04T20:17:37,294 adding 'orangecontrib/single_cell/widgets/owspatialautocorrelation.py' 2026-03-04T20:17:37,296 adding 'orangecontrib/single_cell/widgets/icons/AlignDatasets.svg' 2026-03-04T20:17:37,297 adding 'orangecontrib/single_cell/widgets/icons/BatchEffectRemoval.svg' 2026-03-04T20:17:37,298 adding 'orangecontrib/single_cell/widgets/icons/Binarize.svg' 2026-03-04T20:17:37,300 adding 'orangecontrib/single_cell/widgets/icons/DotMatrix.svg' 2026-03-04T20:17:37,301 adding 'orangecontrib/single_cell/widgets/icons/Dropout.svg' 2026-03-04T20:17:37,302 adding 'orangecontrib/single_cell/widgets/icons/Filter.svg' 2026-03-04T20:17:37,303 adding 'orangecontrib/single_cell/widgets/icons/LoadData.svg' 2026-03-04T20:17:37,305 adding 'orangecontrib/single_cell/widgets/icons/LogarithmicScale.svg' 2026-03-04T20:17:37,306 adding 'orangecontrib/single_cell/widgets/icons/MarkerGenes.svg' 2026-03-04T20:17:37,307 adding 'orangecontrib/single_cell/widgets/icons/MultiSample.svg' 2026-03-04T20:17:37,309 adding 'orangecontrib/single_cell/widgets/icons/Normalize.svg' 2026-03-04T20:17:37,310 adding 'orangecontrib/single_cell/widgets/icons/Rank.svg' 2026-03-04T20:17:37,311 adding 'orangecontrib/single_cell/widgets/icons/ScoreCells.svg' 2026-03-04T20:17:37,312 adding 'orangecontrib/single_cell/widgets/icons/ScoreGenes.svg' 2026-03-04T20:17:37,314 adding 'orangecontrib/single_cell/widgets/icons/SelectGenes.svg' 2026-03-04T20:17:37,315 adding 'orangecontrib/single_cell/widgets/icons/SingleCellDatasets.svg' 2026-03-04T20:17:37,317 adding 'orangecontrib/single_cell/widgets/icons/SingleCellPreprocess.svg' 2026-03-04T20:17:37,318 adding 'orangecontrib/single_cell/widgets/icons/SpatialAutocorrelation.svg' 2026-03-04T20:17:37,319 adding 'orangecontrib/single_cell/widgets/icons/Standardize.svg' 2026-03-04T20:17:37,320 adding 'orangecontrib/single_cell/widgets/icons/VCFFile.svg' 2026-03-04T20:17:37,322 adding 'orangecontrib/single_cell/widgets/icons/category.svg' 2026-03-04T20:17:37,323 adding 'orange3_singlecell-1.7.4.dist-info/METADATA' 2026-03-04T20:17:37,324 adding 'orange3_singlecell-1.7.4.dist-info/WHEEL' 2026-03-04T20:17:37,325 adding 'orange3_singlecell-1.7.4.dist-info/entry_points.txt' 2026-03-04T20:17:37,326 adding 'orange3_singlecell-1.7.4.dist-info/namespace_packages.txt' 2026-03-04T20:17:37,327 adding 'orange3_singlecell-1.7.4.dist-info/top_level.txt' 2026-03-04T20:17:37,329 adding 'orange3_singlecell-1.7.4.dist-info/RECORD' 2026-03-04T20:17:37,343 removing build/bdist.linux-armv7l/wheel 2026-03-04T20:17:37,473 Building wheel for orange3-singlecell (pyproject.toml): finished with status 'done' 2026-03-04T20:17:37,498 Created wheel for orange3-singlecell: filename=orange3_singlecell-1.7.4-py3-none-any.whl size=805318 sha256=51c0ced28361ea75d05da2fc2abd3e777cbd83c5db3a531148ce6d169ce09790 2026-03-04T20:17:37,499 Stored in directory: /tmp/pip-ephem-wheel-cache-oqtkhvl0/wheels/e2/aa/db/55efd09403900929222751473484a95b6c3593605b5c35cceb 2026-03-04T20:17:37,513 Successfully built orange3-singlecell 2026-03-04T20:17:37,535 Removed build tracker: '/tmp/pip-build-tracker-sphzqp6f'