2026-03-05T02:20:11,247 Created temporary directory: /tmp/pip-ephem-wheel-cache-6pomdv9t 2026-03-05T02:20:11,248 Created temporary directory: /tmp/pip-build-tracker-85w603vq 2026-03-05T02:20:11,249 Initialized build tracking at /tmp/pip-build-tracker-85w603vq 2026-03-05T02:20:11,249 Created build tracker: /tmp/pip-build-tracker-85w603vq 2026-03-05T02:20:11,250 Entered build tracker: /tmp/pip-build-tracker-85w603vq 2026-03-05T02:20:11,251 Created temporary directory: /tmp/pip-wheel-hlth4pme 2026-03-05T02:20:11,253 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-03-05T02:20:11,256 Created temporary directory: /tmp/pip-ephem-wheel-cache-n2nxis_w 2026-03-05T02:20:11,277 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-03-05T02:20:11,281 2 location(s) to search for versions of chemiscope: 2026-03-05T02:20:11,281 * https://pypi.org/simple/chemiscope/ 2026-03-05T02:20:11,281 * https://www.piwheels.org/simple/chemiscope/ 2026-03-05T02:20:11,282 Fetching project page and analyzing links: https://pypi.org/simple/chemiscope/ 2026-03-05T02:20:11,282 Getting page https://pypi.org/simple/chemiscope/ 2026-03-05T02:20:11,284 Found index url https://pypi.org/simple 2026-03-05T02:20:11,504 Fetched page https://pypi.org/simple/chemiscope/ as application/vnd.pypi.simple.v1+json 2026-03-05T02:20:11,517 Found link https://files.pythonhosted.org/packages/44/91/d21bf53cb6f46b7bf4eeabb8adf1f33c6077f0cd70fe19a593ad9e5102d6/chemiscope-0.3.0b1.tar.gz (from 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hashes to check 1 links for project 'chemiscope': discarding no candidates 2026-03-05T02:20:11,795 Collecting chemiscope==1.0.1 2026-03-05T02:20:11,798 Created temporary directory: /tmp/pip-unpack-o_0_e8z3 2026-03-05T02:20:12,126 Downloading chemiscope-1.0.1.tar.gz (5.0 MB) 2026-03-05T02:20:13,592 Added chemiscope==1.0.1 from https://files.pythonhosted.org/packages/40/93/71bcb280b9b4cf4352ece31aa28511d272db0b1bd7b3366573a6f4fb43c3/chemiscope-1.0.1.tar.gz to build tracker '/tmp/pip-build-tracker-85w603vq' 2026-03-05T02:20:13,599 Created temporary directory: /tmp/pip-build-env-336wadwx 2026-03-05T02:20:13,603 Installing build dependencies: started 2026-03-05T02:20:13,604 Running command pip subprocess to install build dependencies 2026-03-05T02:20:14,765 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2026-03-05T02:20:15,315 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-03-05T02:20:15,338 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-03-05T02:20:17,048 Collecting setuptools 2026-03-05T02:20:17,128 Using cached https://www.piwheels.org/simple/setuptools/setuptools-82.0.0-py3-none-any.whl (1.0 MB) 2026-03-05T02:20:17,398 Collecting wheel 2026-03-05T02:20:17,412 Using cached https://www.piwheels.org/simple/wheel/wheel-0.46.3-py3-none-any.whl (30 kB) 2026-03-05T02:20:18,713 Collecting jupyterlab>=4.0 2026-03-05T02:20:19,578 Using cached https://www.piwheels.org/simple/jupyterlab/jupyterlab-4.5.5-py3-none-any.whl (12.4 MB) 2026-03-05T02:20:20,141 Collecting packaging>=24.0 2026-03-05T02:20:20,157 Using cached https://www.piwheels.org/simple/packaging/packaging-26.0-py3-none-any.whl (74 kB) 2026-03-05T02:20:20,420 Collecting async-lru>=1.0.0 2026-03-05T02:20:20,435 Using cached 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webencodings, pure-eval, ptyprocess, fastjsonschema, websocket-client, webcolors, wcwidth, urllib3, uri-template, tzdata, typing_extensions, traitlets, tornado, tinycss2, soupsieve, six, setuptools, send2trash, rpds-py, rfc3986-validator, pyzmq, pyyaml, python-json-logger, pygments, pycparser, psutil, prometheus-client, platformdirs, pexpect, parso, pandocfilters, packaging, overrides, nest-asyncio, mistune, MarkupSafe, lark, jupyterlab-pygments, jsonpointer, json5, idna, h11, fqdn, executing, defusedxml, decorator, debugpy, comm, charset_normalizer, certifi, bleach, babel, attrs, async-lru, asttokens, wheel, terminado, stack_data, rfc3987-syntax, rfc3339-validator, requests, referencing, python-dateutil, prompt_toolkit, matplotlib-inline, jupyter-core, jinja2, jedi, ipython-pygments-lexers, httpcore, cffi, beautifulsoup4, anyio, jupyter-server-terminals, jupyter-client, jsonschema-specifications, ipython, httpx, arrow, argon2-cffi-bindings, jsonschema, isoduration, ipykernel, argon2-cffi, nbformat, nbclient, jupyter-events, nbconvert, jupyter-server, notebook-shim, jupyterlab-server, jupyter-lsp, jupyterlab 2026-03-05T02:20:59,921 Creating /tmp/pip-build-env-336wadwx/overlay/local/bin 2026-03-05T02:20:59,923 changing mode of /tmp/pip-build-env-336wadwx/overlay/local/bin/wsdump to 755 2026-03-05T02:21:06,577 changing mode of /tmp/pip-build-env-336wadwx/overlay/local/bin/send2trash to 755 2026-03-05T02:21:10,817 changing mode of /tmp/pip-build-env-336wadwx/overlay/local/bin/pygmentize to 755 2026-03-05T02:21:14,078 changing mode of /tmp/pip-build-env-336wadwx/overlay/local/bin/pyjson5 to 755 2026-03-05T02:21:18,415 changing mode of /tmp/pip-build-env-336wadwx/overlay/local/bin/debugpy to 755 2026-03-05T02:21:18,417 changing mode of /tmp/pip-build-env-336wadwx/overlay/local/bin/debugpy-adapter to 755 2026-03-05T02:21:18,621 changing mode of /tmp/pip-build-env-336wadwx/overlay/local/bin/normalizer to 755 2026-03-05T02:21:22,285 changing mode of /tmp/pip-build-env-336wadwx/overlay/local/bin/pybabel to 755 2026-03-05T02:21:22,933 changing mode of /tmp/pip-build-env-336wadwx/overlay/local/bin/wheel to 755 2026-03-05T02:21:25,424 changing mode of /tmp/pip-build-env-336wadwx/overlay/local/bin/jupyter to 755 2026-03-05T02:21:25,426 changing mode of /tmp/pip-build-env-336wadwx/overlay/local/bin/jupyter-migrate to 755 2026-03-05T02:21:25,429 changing mode of /tmp/pip-build-env-336wadwx/overlay/local/bin/jupyter-troubleshoot to 755 2026-03-05T02:21:31,283 changing mode of /tmp/pip-build-env-336wadwx/overlay/local/bin/jupyter-kernel to 755 2026-03-05T02:21:31,285 changing mode of /tmp/pip-build-env-336wadwx/overlay/local/bin/jupyter-kernelspec to 755 2026-03-05T02:21:31,288 changing mode of /tmp/pip-build-env-336wadwx/overlay/local/bin/jupyter-run to 755 2026-03-05T02:21:33,069 changing mode of /tmp/pip-build-env-336wadwx/overlay/local/bin/ipython to 755 2026-03-05T02:21:33,071 changing mode of /tmp/pip-build-env-336wadwx/overlay/local/bin/ipython3 to 755 2026-03-05T02:21:33,348 changing mode of /tmp/pip-build-env-336wadwx/overlay/local/bin/httpx to 755 2026-03-05T02:21:33,955 changing mode of /tmp/pip-build-env-336wadwx/overlay/local/bin/jsonschema to 755 2026-03-05T02:21:35,577 changing mode of /tmp/pip-build-env-336wadwx/overlay/local/bin/jupyter-trust to 755 2026-03-05T02:21:35,673 changing mode of /tmp/pip-build-env-336wadwx/overlay/local/bin/jupyter-execute to 755 2026-03-05T02:21:35,780 changing mode of /tmp/pip-build-env-336wadwx/overlay/local/bin/jupyter-events to 755 2026-03-05T02:21:36,319 changing mode of /tmp/pip-build-env-336wadwx/overlay/local/bin/jupyter-dejavu to 755 2026-03-05T02:21:36,321 changing mode of /tmp/pip-build-env-336wadwx/overlay/local/bin/jupyter-nbconvert to 755 2026-03-05T02:21:37,154 changing mode of /tmp/pip-build-env-336wadwx/overlay/local/bin/jupyter-server to 755 2026-03-05T02:21:40,858 changing mode of /tmp/pip-build-env-336wadwx/overlay/local/bin/jlpm to 755 2026-03-05T02:21:40,860 changing mode of /tmp/pip-build-env-336wadwx/overlay/local/bin/jupyter-lab to 755 2026-03-05T02:21:40,862 changing mode of /tmp/pip-build-env-336wadwx/overlay/local/bin/jupyter-labextension to 755 2026-03-05T02:21:40,864 changing mode of /tmp/pip-build-env-336wadwx/overlay/local/bin/jupyter-labhub to 755 2026-03-05T02:21:47,587 Successfully installed MarkupSafe-3.0.3 anyio-4.12.1 argon2-cffi-25.1.0 argon2-cffi-bindings-25.1.0 arrow-1.4.0 asttokens-3.0.1 async-lru-2.2.0 attrs-25.4.0 babel-2.18.0 beautifulsoup4-4.14.3 bleach-6.3.0 certifi-2026.2.25 cffi-2.0.0 charset_normalizer-3.4.4 comm-0.2.3 debugpy-1.8.20 decorator-5.2.1 defusedxml-0.7.1 executing-2.2.1 fastjsonschema-2.21.2 fqdn-1.5.1 h11-0.16.0 httpcore-1.0.9 httpx-0.28.1 idna-3.11 ipykernel-7.2.0 ipython-9.10.0 ipython-pygments-lexers-1.1.1 isoduration-20.11.0 jedi-0.19.2 jinja2-3.1.6 json5-0.13.0 jsonpointer-3.0.0 jsonschema-4.26.0 jsonschema-specifications-2025.9.1 jupyter-client-8.8.0 jupyter-core-5.9.1 jupyter-events-0.12.0 jupyter-lsp-2.3.0 jupyter-server-2.17.0 jupyter-server-terminals-0.5.4 jupyterlab-4.5.5 jupyterlab-pygments-0.3.0 jupyterlab-server-2.28.0 lark-1.3.1 matplotlib-inline-0.2.1 mistune-3.2.0 nbclient-0.10.4 nbconvert-7.17.0 nbformat-5.10.4 nest-asyncio-1.6.0 notebook-shim-0.2.4 overrides-7.7.0 packaging-26.0 pandocfilters-1.5.1 parso-0.8.6 pexpect-4.9.0 platformdirs-4.9.2 prometheus-client-0.24.1 prompt_toolkit-3.0.52 psutil-6.0.0 ptyprocess-0.7.0 pure-eval-0.2.3 pycparser-3.0 pygments-2.19.2 python-dateutil-2.9.0.post0 python-json-logger-4.0.0 pyyaml-6.0.3 pyzmq-27.1.0 referencing-0.37.0 requests-2.32.5 rfc3339-validator-0.1.4 rfc3986-validator-0.1.1 rfc3987-syntax-1.1.0 rpds-py-0.30.0 send2trash-2.1.0 setuptools-82.0.0 six-1.17.0 soupsieve-2.8.3 stack_data-0.6.3 terminado-0.18.1 tinycss2-1.4.0 tornado-6.5.3 traitlets-5.14.3 typing_extensions-4.15.0 tzdata-2025.3 uri-template-1.3.0 urllib3-2.6.3 wcwidth-0.6.0 webcolors-25.10.0 webencodings-0.5.1 websocket-client-1.9.0 wheel-0.46.3 2026-03-05T02:21:48,748 Installing build dependencies: finished with status 'done' 2026-03-05T02:21:48,756 Getting requirements to build wheel: started 2026-03-05T02:21:48,757 Running command Getting requirements to build wheel 2026-03-05T02:21:49,546 /tmp/pip-build-env-336wadwx/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-03-05T02:21:49,546 !! 2026-03-05T02:21:49,547 ******************************************************************************** 2026-03-05T02:21:49,548 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-03-05T02:21:49,549 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-03-05T02:21:49,549 or your builds will no longer be supported. 2026-03-05T02:21:49,550 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-03-05T02:21:49,551 ******************************************************************************** 2026-03-05T02:21:49,552 !! 2026-03-05T02:21:49,552 corresp(dist, value, root_dir) 2026-03-05T02:21:49,734 /tmp/pip-build-env-336wadwx/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-03-05T02:21:49,734 !! 2026-03-05T02:21:49,735 ******************************************************************************** 2026-03-05T02:21:49,736 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-03-05T02:21:49,737 License :: OSI Approved :: BSD License 2026-03-05T02:21:49,738 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-03-05T02:21:49,738 ******************************************************************************** 2026-03-05T02:21:49,739 !! 2026-03-05T02:21:49,740 dist._finalize_license_expression() 2026-03-05T02:21:49,740 /tmp/pip-build-env-336wadwx/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-03-05T02:21:49,741 !! 2026-03-05T02:21:49,742 ******************************************************************************** 2026-03-05T02:21:49,742 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-03-05T02:21:49,744 License :: OSI Approved :: BSD License 2026-03-05T02:21:49,745 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-03-05T02:21:49,745 ******************************************************************************** 2026-03-05T02:21:49,746 !! 2026-03-05T02:21:49,747 self._finalize_license_expression() 2026-03-05T02:21:49,765 running egg_info 2026-03-05T02:21:49,790 writing python/chemiscope.egg-info/PKG-INFO 2026-03-05T02:21:49,795 writing dependency_links to python/chemiscope.egg-info/dependency_links.txt 2026-03-05T02:21:49,797 writing entry points to python/chemiscope.egg-info/entry_points.txt 2026-03-05T02:21:49,800 writing requirements to python/chemiscope.egg-info/requires.txt 2026-03-05T02:21:49,801 writing top-level names to python/chemiscope.egg-info/top_level.txt 2026-03-05T02:21:49,885 reading manifest file 'python/chemiscope.egg-info/SOURCES.txt' 2026-03-05T02:21:49,890 reading manifest template 'MANIFEST.in' 2026-03-05T02:21:49,907 adding license file 'LICENSE' 2026-03-05T02:21:49,912 writing manifest file 'python/chemiscope.egg-info/SOURCES.txt' 2026-03-05T02:21:50,015 Getting requirements to build wheel: finished with status 'done' 2026-03-05T02:21:50,018 Created temporary directory: /tmp/pip-modern-metadata-018_0qfo 2026-03-05T02:21:50,021 Preparing metadata (pyproject.toml): started 2026-03-05T02:21:50,022 Running command Preparing metadata (pyproject.toml) 2026-03-05T02:21:50,659 /tmp/pip-build-env-336wadwx/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-03-05T02:21:50,660 !! 2026-03-05T02:21:50,661 ******************************************************************************** 2026-03-05T02:21:50,661 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-03-05T02:21:50,662 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-03-05T02:21:50,662 or your builds will no longer be supported. 2026-03-05T02:21:50,663 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-03-05T02:21:50,664 ******************************************************************************** 2026-03-05T02:21:50,665 !! 2026-03-05T02:21:50,665 corresp(dist, value, root_dir) 2026-03-05T02:21:50,834 /tmp/pip-build-env-336wadwx/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-03-05T02:21:50,835 !! 2026-03-05T02:21:50,836 ******************************************************************************** 2026-03-05T02:21:50,836 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-03-05T02:21:50,837 License :: OSI Approved :: BSD License 2026-03-05T02:21:50,838 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-03-05T02:21:50,839 ******************************************************************************** 2026-03-05T02:21:50,840 !! 2026-03-05T02:21:50,840 dist._finalize_license_expression() 2026-03-05T02:21:50,841 /tmp/pip-build-env-336wadwx/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-03-05T02:21:50,841 !! 2026-03-05T02:21:50,842 ******************************************************************************** 2026-03-05T02:21:50,843 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-03-05T02:21:50,844 License :: OSI Approved :: BSD License 2026-03-05T02:21:50,845 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-03-05T02:21:50,846 ******************************************************************************** 2026-03-05T02:21:50,847 !! 2026-03-05T02:21:50,847 self._finalize_license_expression() 2026-03-05T02:21:50,868 running dist_info 2026-03-05T02:21:50,915 creating /tmp/pip-modern-metadata-018_0qfo/chemiscope.egg-info 2026-03-05T02:21:50,916 writing /tmp/pip-modern-metadata-018_0qfo/chemiscope.egg-info/PKG-INFO 2026-03-05T02:21:50,922 writing dependency_links to /tmp/pip-modern-metadata-018_0qfo/chemiscope.egg-info/dependency_links.txt 2026-03-05T02:21:50,923 writing entry points to /tmp/pip-modern-metadata-018_0qfo/chemiscope.egg-info/entry_points.txt 2026-03-05T02:21:50,926 writing requirements to /tmp/pip-modern-metadata-018_0qfo/chemiscope.egg-info/requires.txt 2026-03-05T02:21:50,927 writing top-level names to /tmp/pip-modern-metadata-018_0qfo/chemiscope.egg-info/top_level.txt 2026-03-05T02:21:50,929 writing manifest file '/tmp/pip-modern-metadata-018_0qfo/chemiscope.egg-info/SOURCES.txt' 2026-03-05T02:21:51,010 reading manifest file '/tmp/pip-modern-metadata-018_0qfo/chemiscope.egg-info/SOURCES.txt' 2026-03-05T02:21:51,012 reading manifest template 'MANIFEST.in' 2026-03-05T02:21:51,028 adding license file 'LICENSE' 2026-03-05T02:21:51,032 writing manifest file '/tmp/pip-modern-metadata-018_0qfo/chemiscope.egg-info/SOURCES.txt' 2026-03-05T02:21:51,033 creating '/tmp/pip-modern-metadata-018_0qfo/chemiscope-1.0.1.dist-info' 2026-03-05T02:21:51,189 Preparing metadata (pyproject.toml): finished with status 'done' 2026-03-05T02:21:51,194 Source in /tmp/pip-wheel-hlth4pme/chemiscope_a9f811711f674cd0ba135ddee342099f has version 1.0.1, which satisfies requirement chemiscope==1.0.1 from https://files.pythonhosted.org/packages/40/93/71bcb280b9b4cf4352ece31aa28511d272db0b1bd7b3366573a6f4fb43c3/chemiscope-1.0.1.tar.gz 2026-03-05T02:21:51,195 Removed chemiscope==1.0.1 from https://files.pythonhosted.org/packages/40/93/71bcb280b9b4cf4352ece31aa28511d272db0b1bd7b3366573a6f4fb43c3/chemiscope-1.0.1.tar.gz from build tracker '/tmp/pip-build-tracker-85w603vq' 2026-03-05T02:21:51,200 Created temporary directory: /tmp/pip-unpack-ja9_s0ee 2026-03-05T02:21:51,201 Building wheels for collected packages: chemiscope 2026-03-05T02:21:51,206 Created temporary directory: /tmp/pip-wheel-08o1_lko 2026-03-05T02:21:51,207 Destination directory: /tmp/pip-wheel-08o1_lko 2026-03-05T02:21:51,209 Building wheel for chemiscope (pyproject.toml): started 2026-03-05T02:21:51,210 Running command Building wheel for chemiscope (pyproject.toml) 2026-03-05T02:21:51,867 /tmp/pip-build-env-336wadwx/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2026-03-05T02:21:51,867 !! 2026-03-05T02:21:51,868 ******************************************************************************** 2026-03-05T02:21:51,869 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2026-03-05T02:21:51,870 By 2027-Feb-18, you need to update your project and remove deprecated calls 2026-03-05T02:21:51,870 or your builds will no longer be supported. 2026-03-05T02:21:51,871 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-03-05T02:21:51,872 ******************************************************************************** 2026-03-05T02:21:51,873 !! 2026-03-05T02:21:51,873 corresp(dist, value, root_dir) 2026-03-05T02:21:52,033 /tmp/pip-build-env-336wadwx/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-03-05T02:21:52,034 !! 2026-03-05T02:21:52,035 ******************************************************************************** 2026-03-05T02:21:52,036 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-03-05T02:21:52,037 License :: OSI Approved :: BSD License 2026-03-05T02:21:52,037 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-03-05T02:21:52,038 ******************************************************************************** 2026-03-05T02:21:52,039 !! 2026-03-05T02:21:52,039 dist._finalize_license_expression() 2026-03-05T02:21:52,043 /tmp/pip-build-env-336wadwx/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-03-05T02:21:52,043 !! 2026-03-05T02:21:52,044 ******************************************************************************** 2026-03-05T02:21:52,044 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-03-05T02:21:52,045 License :: OSI Approved :: BSD License 2026-03-05T02:21:52,046 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-03-05T02:21:52,046 ******************************************************************************** 2026-03-05T02:21:52,047 !! 2026-03-05T02:21:52,048 self._finalize_license_expression() 2026-03-05T02:21:52,048 running bdist_wheel 2026-03-05T02:21:52,142 running build 2026-03-05T02:21:52,143 running build_py 2026-03-05T02:21:52,170 creating build/lib/chemiscope 2026-03-05T02:21:52,173 copying python/chemiscope/jupyter.py -> build/lib/chemiscope 2026-03-05T02:21:52,176 copying python/chemiscope/input.py -> build/lib/chemiscope 2026-03-05T02:21:52,179 copying python/chemiscope/headless.py -> build/lib/chemiscope 2026-03-05T02:21:52,182 copying python/chemiscope/version.py -> build/lib/chemiscope 2026-03-05T02:21:52,184 copying python/chemiscope/main.py -> build/lib/chemiscope 2026-03-05T02:21:52,187 copying python/chemiscope/__init__.py -> build/lib/chemiscope 2026-03-05T02:21:52,189 creating build/lib/chemiscope/streamlit 2026-03-05T02:21:52,190 copying python/chemiscope/streamlit/__init__.py -> build/lib/chemiscope/streamlit 2026-03-05T02:21:52,194 creating build/lib/chemiscope/explore 2026-03-05T02:21:52,195 copying python/chemiscope/explore/_metatomic.py -> build/lib/chemiscope/explore 2026-03-05T02:21:52,197 copying python/chemiscope/explore/__init__.py -> build/lib/chemiscope/explore 2026-03-05T02:21:52,200 creating build/lib/chemiscope/structures 2026-03-05T02:21:52,202 copying python/chemiscope/structures/_mda.py -> build/lib/chemiscope/structures 2026-03-05T02:21:52,204 copying python/chemiscope/structures/_chemfiles.py -> build/lib/chemiscope/structures 2026-03-05T02:21:52,207 copying python/chemiscope/structures/_stk.py -> build/lib/chemiscope/structures 2026-03-05T02:21:52,209 copying python/chemiscope/structures/_shapes.py -> build/lib/chemiscope/structures 2026-03-05T02:21:52,212 copying python/chemiscope/structures/__init__.py -> build/lib/chemiscope/structures 2026-03-05T02:21:52,214 copying python/chemiscope/structures/_ase.py -> build/lib/chemiscope/structures 2026-03-05T02:21:52,218 creating build/lib/chemiscope/sphinx 2026-03-05T02:21:52,219 copying python/chemiscope/sphinx/_file_path_iterator.py -> build/lib/chemiscope/sphinx 2026-03-05T02:21:52,222 copying python/chemiscope/sphinx/_utils.py -> build/lib/chemiscope/sphinx 2026-03-05T02:21:52,224 copying python/chemiscope/sphinx/_scraper.py -> build/lib/chemiscope/sphinx 2026-03-05T02:21:52,226 copying python/chemiscope/sphinx/_directive.py -> build/lib/chemiscope/sphinx 2026-03-05T02:21:52,229 copying python/chemiscope/sphinx/_nodes.py -> build/lib/chemiscope/sphinx 2026-03-05T02:21:52,231 copying python/chemiscope/sphinx/__init__.py -> build/lib/chemiscope/sphinx 2026-03-05T02:21:52,233 running egg_info 2026-03-05T02:21:52,284 writing python/chemiscope.egg-info/PKG-INFO 2026-03-05T02:21:52,288 writing dependency_links to python/chemiscope.egg-info/dependency_links.txt 2026-03-05T02:21:52,290 writing entry points to python/chemiscope.egg-info/entry_points.txt 2026-03-05T02:21:52,293 writing requirements to python/chemiscope.egg-info/requires.txt 2026-03-05T02:21:52,295 writing top-level names to python/chemiscope.egg-info/top_level.txt 2026-03-05T02:21:52,329 reading manifest file 'python/chemiscope.egg-info/SOURCES.txt' 2026-03-05T02:21:52,334 reading manifest template 'MANIFEST.in' 2026-03-05T02:21:52,350 adding license file 'LICENSE' 2026-03-05T02:21:52,355 writing manifest file 'python/chemiscope.egg-info/SOURCES.txt' 2026-03-05T02:21:52,357 /tmp/pip-build-env-336wadwx/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:215: _Warning: Package 'chemiscope.sphinx.static' is absent from the `packages` configuration. 2026-03-05T02:21:52,358 !! 2026-03-05T02:21:52,359 ******************************************************************************** 2026-03-05T02:21:52,359 ############################ 2026-03-05T02:21:52,360 # Package would be ignored # 2026-03-05T02:21:52,360 ############################ 2026-03-05T02:21:52,361 Python recognizes 'chemiscope.sphinx.static' as an importable package[^1], 2026-03-05T02:21:52,361 but it is absent from setuptools' `packages` configuration. 2026-03-05T02:21:52,362 This leads to an ambiguous overall configuration. If you want to distribute this 2026-03-05T02:21:52,363 package, please make sure that 'chemiscope.sphinx.static' is explicitly added 2026-03-05T02:21:52,363 to the `packages` configuration field. 2026-03-05T02:21:52,364 Alternatively, you can also rely on setuptools' discovery methods 2026-03-05T02:21:52,365 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2026-03-05T02:21:52,365 instead of `find_packages(...)`/`find:`). 2026-03-05T02:21:52,366 You can read more about "package discovery" on setuptools documentation page: 2026-03-05T02:21:52,367 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2026-03-05T02:21:52,368 If you don't want 'chemiscope.sphinx.static' to be distributed and are 2026-03-05T02:21:52,368 already explicitly excluding 'chemiscope.sphinx.static' via 2026-03-05T02:21:52,369 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2026-03-05T02:21:52,370 you can try to use `exclude_package_data`, or `include-package-data=False` in 2026-03-05T02:21:52,370 combination with a more fine grained `package-data` configuration. 2026-03-05T02:21:52,371 You can read more about "package data files" on setuptools documentation page: 2026-03-05T02:21:52,372 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2026-03-05T02:21:52,374 [^1]: For Python, any directory (with suitable naming) can be imported, 2026-03-05T02:21:52,374 even if it does not contain any `.py` files. 2026-03-05T02:21:52,375 On the other hand, currently there is no concept of package data 2026-03-05T02:21:52,375 directory, all directories are treated like packages. 2026-03-05T02:21:52,375 ******************************************************************************** 2026-03-05T02:21:52,376 !! 2026-03-05T02:21:52,377 check.warn(importable) 2026-03-05T02:21:52,377 creating build/lib/chemiscope/sphinx/static 2026-03-05T02:21:52,378 copying python/chemiscope/sphinx/static/chemiscope.min.js -> build/lib/chemiscope/sphinx/static 2026-03-05T02:21:52,430 copying python/chemiscope/sphinx/static/chemiscope-sphinx.css -> build/lib/chemiscope/sphinx/static 2026-03-05T02:21:52,433 copying python/chemiscope/sphinx/static/chemiscope-loading.svg -> build/lib/chemiscope/sphinx/static 2026-03-05T02:21:52,435 copying python/chemiscope/sphinx/static/chemiscope-sphinx.html -> build/lib/chemiscope/sphinx/static 2026-03-05T02:21:52,438 copying python/chemiscope/sphinx/static/chemiscope-sphinx.js -> build/lib/chemiscope/sphinx/static 2026-03-05T02:21:52,441 copying python/chemiscope/streamlit/chemiscope-streamlit.min.js -> build/lib/chemiscope/streamlit 2026-03-05T02:21:52,493 copying python/chemiscope/streamlit/index.html -> build/lib/chemiscope/streamlit 2026-03-05T02:21:52,496 copying python/chemiscope/sphinx/static/.gitignore -> build/lib/chemiscope/sphinx/static 2026-03-05T02:21:52,549 installing to build/bdist.linux-armv7l/wheel 2026-03-05T02:21:52,549 running install 2026-03-05T02:21:52,573 running install_lib 2026-03-05T02:21:52,597 creating build/bdist.linux-armv7l/wheel 2026-03-05T02:21:52,599 creating build/bdist.linux-armv7l/wheel/chemiscope 2026-03-05T02:21:52,601 creating build/bdist.linux-armv7l/wheel/chemiscope/streamlit 2026-03-05T02:21:52,602 copying build/lib/chemiscope/streamlit/chemiscope-streamlit.min.js -> build/bdist.linux-armv7l/wheel/./chemiscope/streamlit 2026-03-05T02:21:52,654 copying build/lib/chemiscope/streamlit/index.html -> build/bdist.linux-armv7l/wheel/./chemiscope/streamlit 2026-03-05T02:21:52,656 copying build/lib/chemiscope/streamlit/__init__.py -> build/bdist.linux-armv7l/wheel/./chemiscope/streamlit 2026-03-05T02:21:52,658 copying build/lib/chemiscope/jupyter.py -> build/bdist.linux-armv7l/wheel/./chemiscope 2026-03-05T02:21:52,661 creating build/bdist.linux-armv7l/wheel/chemiscope/explore 2026-03-05T02:21:52,662 copying build/lib/chemiscope/explore/_metatomic.py -> build/bdist.linux-armv7l/wheel/./chemiscope/explore 2026-03-05T02:21:52,664 copying build/lib/chemiscope/explore/__init__.py -> build/bdist.linux-armv7l/wheel/./chemiscope/explore 2026-03-05T02:21:52,666 copying build/lib/chemiscope/input.py -> build/bdist.linux-armv7l/wheel/./chemiscope 2026-03-05T02:21:52,669 copying build/lib/chemiscope/headless.py -> build/bdist.linux-armv7l/wheel/./chemiscope 2026-03-05T02:21:52,672 copying build/lib/chemiscope/version.py -> build/bdist.linux-armv7l/wheel/./chemiscope 2026-03-05T02:21:52,674 creating build/bdist.linux-armv7l/wheel/chemiscope/structures 2026-03-05T02:21:52,675 copying build/lib/chemiscope/structures/_mda.py -> build/bdist.linux-armv7l/wheel/./chemiscope/structures 2026-03-05T02:21:52,677 copying build/lib/chemiscope/structures/_chemfiles.py -> build/bdist.linux-armv7l/wheel/./chemiscope/structures 2026-03-05T02:21:52,680 copying build/lib/chemiscope/structures/_stk.py -> build/bdist.linux-armv7l/wheel/./chemiscope/structures 2026-03-05T02:21:52,682 copying build/lib/chemiscope/structures/_shapes.py -> build/bdist.linux-armv7l/wheel/./chemiscope/structures 2026-03-05T02:21:52,684 copying build/lib/chemiscope/structures/__init__.py -> build/bdist.linux-armv7l/wheel/./chemiscope/structures 2026-03-05T02:21:52,686 copying build/lib/chemiscope/structures/_ase.py -> build/bdist.linux-armv7l/wheel/./chemiscope/structures 2026-03-05T02:21:52,689 creating build/bdist.linux-armv7l/wheel/chemiscope/sphinx 2026-03-05T02:21:52,690 copying build/lib/chemiscope/sphinx/_file_path_iterator.py -> build/bdist.linux-armv7l/wheel/./chemiscope/sphinx 2026-03-05T02:21:52,692 copying build/lib/chemiscope/sphinx/_utils.py -> build/bdist.linux-armv7l/wheel/./chemiscope/sphinx 2026-03-05T02:21:52,694 copying build/lib/chemiscope/sphinx/_scraper.py -> build/bdist.linux-armv7l/wheel/./chemiscope/sphinx 2026-03-05T02:21:52,695 copying build/lib/chemiscope/sphinx/_directive.py -> build/bdist.linux-armv7l/wheel/./chemiscope/sphinx 2026-03-05T02:21:52,698 copying build/lib/chemiscope/sphinx/_nodes.py -> build/bdist.linux-armv7l/wheel/./chemiscope/sphinx 2026-03-05T02:21:52,700 creating build/bdist.linux-armv7l/wheel/chemiscope/sphinx/static 2026-03-05T02:21:52,701 copying build/lib/chemiscope/sphinx/static/chemiscope.min.js -> build/bdist.linux-armv7l/wheel/./chemiscope/sphinx/static 2026-03-05T02:21:52,801 copying build/lib/chemiscope/sphinx/static/.gitignore -> build/bdist.linux-armv7l/wheel/./chemiscope/sphinx/static 2026-03-05T02:21:52,803 copying build/lib/chemiscope/sphinx/static/chemiscope-sphinx.css -> build/bdist.linux-armv7l/wheel/./chemiscope/sphinx/static 2026-03-05T02:21:52,805 copying build/lib/chemiscope/sphinx/static/chemiscope-loading.svg -> build/bdist.linux-armv7l/wheel/./chemiscope/sphinx/static 2026-03-05T02:21:52,807 copying build/lib/chemiscope/sphinx/static/chemiscope-sphinx.html -> build/bdist.linux-armv7l/wheel/./chemiscope/sphinx/static 2026-03-05T02:21:52,808 copying build/lib/chemiscope/sphinx/static/chemiscope-sphinx.js -> build/bdist.linux-armv7l/wheel/./chemiscope/sphinx/static 2026-03-05T02:21:52,811 copying build/lib/chemiscope/sphinx/__init__.py -> build/bdist.linux-armv7l/wheel/./chemiscope/sphinx 2026-03-05T02:21:52,812 copying build/lib/chemiscope/main.py -> build/bdist.linux-armv7l/wheel/./chemiscope 2026-03-05T02:21:52,815 copying build/lib/chemiscope/__init__.py -> build/bdist.linux-armv7l/wheel/./chemiscope 2026-03-05T02:21:52,816 running install_data 2026-03-05T02:21:52,841 creating build/bdist.linux-armv7l/wheel/chemiscope-1.0.1.data/data 2026-03-05T02:21:52,843 creating build/bdist.linux-armv7l/wheel/chemiscope-1.0.1.data/data/share/jupyter/nbextensions/chemiscope 2026-03-05T02:21:52,846 copying python/jupyter/extension.js -> build/bdist.linux-armv7l/wheel/chemiscope-1.0.1.data/data/share/jupyter/nbextensions/chemiscope 2026-03-05T02:21:52,848 copying python/jupyter/nbextension/chemiscope.min.js -> build/bdist.linux-armv7l/wheel/chemiscope-1.0.1.data/data/share/jupyter/nbextensions/chemiscope 2026-03-05T02:21:52,898 creating build/bdist.linux-armv7l/wheel/chemiscope-1.0.1.data/data/etc/jupyter/nbconfig/notebook.d 2026-03-05T02:21:52,902 copying python/jupyter/chemiscope.json -> build/bdist.linux-armv7l/wheel/chemiscope-1.0.1.data/data/etc/jupyter/nbconfig/notebook.d 2026-03-05T02:21:52,904 creating build/bdist.linux-armv7l/wheel/chemiscope-1.0.1.data/data/share/jupyter/labextensions/chemiscope 2026-03-05T02:21:52,906 copying python/jupyter/labextension/install.json -> build/bdist.linux-armv7l/wheel/chemiscope-1.0.1.data/data/share/jupyter/labextensions/chemiscope 2026-03-05T02:21:52,908 copying python/jupyter/labextension/package.json -> build/bdist.linux-armv7l/wheel/chemiscope-1.0.1.data/data/share/jupyter/labextensions/chemiscope 2026-03-05T02:21:52,910 creating build/bdist.linux-armv7l/wheel/chemiscope-1.0.1.data/data/share/jupyter/labextensions/chemiscope/static 2026-03-05T02:21:52,911 copying python/jupyter/labextension/static/third-party-licenses.json -> build/bdist.linux-armv7l/wheel/chemiscope-1.0.1.data/data/share/jupyter/labextensions/chemiscope/static 2026-03-05T02:21:52,916 copying python/jupyter/labextension/static/841.46a475ffbb6420ad3fd6.js -> build/bdist.linux-armv7l/wheel/chemiscope-1.0.1.data/data/share/jupyter/labextensions/chemiscope/static 2026-03-05T02:21:52,965 copying python/jupyter/labextension/static/style.js -> build/bdist.linux-armv7l/wheel/chemiscope-1.0.1.data/data/share/jupyter/labextensions/chemiscope/static 2026-03-05T02:21:52,967 copying python/jupyter/labextension/static/78.f5feb34705ba910804f4.js -> build/bdist.linux-armv7l/wheel/chemiscope-1.0.1.data/data/share/jupyter/labextensions/chemiscope/static 2026-03-05T02:21:53,018 copying python/jupyter/labextension/static/305.cdab8d8e064955d0ed36.js -> build/bdist.linux-armv7l/wheel/chemiscope-1.0.1.data/data/share/jupyter/labextensions/chemiscope/static 2026-03-05T02:21:53,024 copying python/jupyter/labextension/static/78.f5feb34705ba910804f4.js.LICENSE.txt -> build/bdist.linux-armv7l/wheel/chemiscope-1.0.1.data/data/share/jupyter/labextensions/chemiscope/static 2026-03-05T02:21:53,027 copying python/jupyter/labextension/static/remoteEntry.9c30d65a6e6cdbec6ca6.js -> build/bdist.linux-armv7l/wheel/chemiscope-1.0.1.data/data/share/jupyter/labextensions/chemiscope/static 2026-03-05T02:21:53,029 running install_egg_info 2026-03-05T02:21:53,054 Copying python/chemiscope.egg-info to build/bdist.linux-armv7l/wheel/./chemiscope-1.0.1-py3.11.egg-info 2026-03-05T02:21:53,066 running install_scripts 2026-03-05T02:21:53,078 creating build/bdist.linux-armv7l/wheel/chemiscope-1.0.1.dist-info/WHEEL 2026-03-05T02:21:53,081 creating '/tmp/pip-wheel-08o1_lko/.tmp-acdw0czi/chemiscope-1.0.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-03-05T02:21:53,083 adding 'chemiscope/__init__.py' 2026-03-05T02:21:53,085 adding 'chemiscope/headless.py' 2026-03-05T02:21:53,091 adding 'chemiscope/input.py' 2026-03-05T02:21:53,095 adding 'chemiscope/jupyter.py' 2026-03-05T02:21:53,097 adding 'chemiscope/main.py' 2026-03-05T02:21:53,098 adding 'chemiscope/version.py' 2026-03-05T02:21:53,100 adding 'chemiscope/explore/__init__.py' 2026-03-05T02:21:53,102 adding 'chemiscope/explore/_metatomic.py' 2026-03-05T02:21:53,104 adding 'chemiscope/sphinx/__init__.py' 2026-03-05T02:21:53,106 adding 'chemiscope/sphinx/_directive.py' 2026-03-05T02:21:53,107 adding 'chemiscope/sphinx/_file_path_iterator.py' 2026-03-05T02:21:53,108 adding 'chemiscope/sphinx/_nodes.py' 2026-03-05T02:21:53,110 adding 'chemiscope/sphinx/_scraper.py' 2026-03-05T02:21:53,111 adding 'chemiscope/sphinx/_utils.py' 2026-03-05T02:21:53,113 adding 'chemiscope/sphinx/static/.gitignore' 2026-03-05T02:21:53,114 adding 'chemiscope/sphinx/static/chemiscope-loading.svg' 2026-03-05T02:21:53,115 adding 'chemiscope/sphinx/static/chemiscope-sphinx.css' 2026-03-05T02:21:53,116 adding 'chemiscope/sphinx/static/chemiscope-sphinx.html' 2026-03-05T02:21:53,118 adding 'chemiscope/sphinx/static/chemiscope-sphinx.js' 2026-03-05T02:21:53,486 adding 'chemiscope/sphinx/static/chemiscope.min.js' 2026-03-05T02:21:53,507 adding 'chemiscope/streamlit/__init__.py' 2026-03-05T02:21:53,897 adding 'chemiscope/streamlit/chemiscope-streamlit.min.js' 2026-03-05T02:21:53,921 adding 'chemiscope/streamlit/index.html' 2026-03-05T02:21:53,923 adding 'chemiscope/structures/__init__.py' 2026-03-05T02:21:53,926 adding 'chemiscope/structures/_ase.py' 2026-03-05T02:21:53,928 adding 'chemiscope/structures/_chemfiles.py' 2026-03-05T02:21:53,929 adding 'chemiscope/structures/_mda.py' 2026-03-05T02:21:53,931 adding 'chemiscope/structures/_shapes.py' 2026-03-05T02:21:53,932 adding 'chemiscope/structures/_stk.py' 2026-03-05T02:21:53,936 adding 'chemiscope-1.0.1.data/data/etc/jupyter/nbconfig/notebook.d/chemiscope.json' 2026-03-05T02:21:53,939 adding 'chemiscope-1.0.1.data/data/share/jupyter/labextensions/chemiscope/install.json' 2026-03-05T02:21:53,940 adding 'chemiscope-1.0.1.data/data/share/jupyter/labextensions/chemiscope/package.json' 2026-03-05T02:21:53,973 adding 'chemiscope-1.0.1.data/data/share/jupyter/labextensions/chemiscope/static/305.cdab8d8e064955d0ed36.js' 2026-03-05T02:21:54,327 adding 'chemiscope-1.0.1.data/data/share/jupyter/labextensions/chemiscope/static/78.f5feb34705ba910804f4.js' 2026-03-05T02:21:54,348 adding 'chemiscope-1.0.1.data/data/share/jupyter/labextensions/chemiscope/static/78.f5feb34705ba910804f4.js.LICENSE.txt' 2026-03-05T02:21:54,716 adding 'chemiscope-1.0.1.data/data/share/jupyter/labextensions/chemiscope/static/841.46a475ffbb6420ad3fd6.js' 2026-03-05T02:21:54,737 adding 'chemiscope-1.0.1.data/data/share/jupyter/labextensions/chemiscope/static/remoteEntry.9c30d65a6e6cdbec6ca6.js' 2026-03-05T02:21:54,738 adding 'chemiscope-1.0.1.data/data/share/jupyter/labextensions/chemiscope/static/style.js' 2026-03-05T02:21:54,745 adding 'chemiscope-1.0.1.data/data/share/jupyter/labextensions/chemiscope/static/third-party-licenses.json' 2026-03-05T02:21:55,120 adding 'chemiscope-1.0.1.data/data/share/jupyter/nbextensions/chemiscope/chemiscope.min.js' 2026-03-05T02:21:55,141 adding 'chemiscope-1.0.1.data/data/share/jupyter/nbextensions/chemiscope/extension.js' 2026-03-05T02:21:55,144 adding 'chemiscope-1.0.1.dist-info/licenses/LICENSE' 2026-03-05T02:21:55,145 adding 'chemiscope-1.0.1.dist-info/METADATA' 2026-03-05T02:21:55,146 adding 'chemiscope-1.0.1.dist-info/WHEEL' 2026-03-05T02:21:55,147 adding 'chemiscope-1.0.1.dist-info/entry_points.txt' 2026-03-05T02:21:55,148 adding 'chemiscope-1.0.1.dist-info/top_level.txt' 2026-03-05T02:21:55,149 adding 'chemiscope-1.0.1.dist-info/RECORD' 2026-03-05T02:21:55,211 removing build/bdist.linux-armv7l/wheel 2026-03-05T02:21:55,396 Building wheel for chemiscope (pyproject.toml): finished with status 'done' 2026-03-05T02:21:55,554 Created wheel for chemiscope: filename=chemiscope-1.0.1-py3-none-any.whl size=5037337 sha256=d333a8069918961bb6ac47669eed2ab0723d230064e4207dd07a95541be2ebd8 2026-03-05T02:21:55,555 Stored in directory: /tmp/pip-ephem-wheel-cache-n2nxis_w/wheels/fb/85/76/cff6b0f17800d9eb12b9d60cd6d7ca8e3a5a7773e026063f2a 2026-03-05T02:21:55,569 Successfully built chemiscope 2026-03-05T02:21:55,707 Removed build tracker: '/tmp/pip-build-tracker-85w603vq'