2026-03-05T04:27:14,260 Created temporary directory: /tmp/pip-ephem-wheel-cache-n5n9o7hv 2026-03-05T04:27:14,262 Created temporary directory: /tmp/pip-build-tracker-g46ubicp 2026-03-05T04:27:14,263 Initialized build tracking at /tmp/pip-build-tracker-g46ubicp 2026-03-05T04:27:14,263 Created build tracker: /tmp/pip-build-tracker-g46ubicp 2026-03-05T04:27:14,264 Entered build tracker: /tmp/pip-build-tracker-g46ubicp 2026-03-05T04:27:14,265 Created temporary directory: /tmp/pip-wheel-x23wnb5r 2026-03-05T04:27:14,268 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2026-03-05T04:27:14,270 Created temporary directory: /tmp/pip-ephem-wheel-cache-23_jzny5 2026-03-05T04:27:14,294 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2026-03-05T04:27:14,297 2 location(s) to search for versions of biobb-common: 2026-03-05T04:27:14,297 * https://pypi.org/simple/biobb-common/ 2026-03-05T04:27:14,297 * https://www.piwheels.org/simple/biobb-common/ 2026-03-05T04:27:14,298 Fetching project page and analyzing links: https://pypi.org/simple/biobb-common/ 2026-03-05T04:27:14,299 Getting page https://pypi.org/simple/biobb-common/ 2026-03-05T04:27:14,301 Found index url https://pypi.org/simple 2026-03-05T04:27:14,515 Fetched page https://pypi.org/simple/biobb-common/ as application/vnd.pypi.simple.v1+json 2026-03-05T04:27:14,528 Skipping link: No binaries permitted for biobb-common: 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https://files.pythonhosted.org/packages/d8/70/ed7989632ffcc2e3e546866796402010fd5732c2ea309aea8b10614fba11/biobb_common-5.0.0.tar.gz (from https://pypi.org/simple/biobb-common/) (requires-python:>=3.9), version: 5.0.0 2026-03-05T04:27:14,629 Skipping link: No binaries permitted for biobb-common: https://files.pythonhosted.org/packages/b8/f8/06ba55df04693d87cfdf384aad1e678b8895cc27fa95a297dbbed636a9c5/biobb_common-5.0.1-py3-none-any.whl (from https://pypi.org/simple/biobb-common/) (requires-python:>=3.9) 2026-03-05T04:27:14,631 Found link https://files.pythonhosted.org/packages/19/3d/c9c6e67b647d3f968e867aad344c18454f30ee9d0276e4dcd91831f289a8/biobb_common-5.0.1.tar.gz (from https://pypi.org/simple/biobb-common/) (requires-python:>=3.9), version: 5.0.1 2026-03-05T04:27:14,632 Skipping link: No binaries permitted for biobb-common: https://files.pythonhosted.org/packages/45/db/8c6bf34389e8dc59a5d2daa865ccaec3b9262878203a5b5b655e352bc541/biobb_common-5.1.0-py3-none-any.whl (from https://pypi.org/simple/biobb-common/) (requires-python:>=3.9) 2026-03-05T04:27:14,633 Found link https://files.pythonhosted.org/packages/95/3e/f6895e3c2512bc1292cf5014920ccfd42cc5a9fbb9bd30cc5612c0a030f4/biobb_common-5.1.0.tar.gz (from https://pypi.org/simple/biobb-common/) (requires-python:>=3.9), version: 5.1.0 2026-03-05T04:27:14,635 Skipping link: No binaries permitted for biobb-common: https://files.pythonhosted.org/packages/bb/c3/c3efdadceac7ea6ad0bcf6c804da29ba9550cfe66f6735821fc75bd802db/biobb_common-5.1.1-py3-none-any.whl (from https://pypi.org/simple/biobb-common/) (requires-python:>=3.9) 2026-03-05T04:27:14,637 Found link https://files.pythonhosted.org/packages/26/28/78bb60ce10de7662531d004c0a962a50c05da080d32bffafae0baa564b6c/biobb_common-5.1.1.tar.gz (from https://pypi.org/simple/biobb-common/) (requires-python:>=3.9), version: 5.1.1 2026-03-05T04:27:14,638 Skipping link: No binaries permitted for biobb-common: https://files.pythonhosted.org/packages/60/23/8cf7ffa5e9cfcc2757f0ebbff840c6a043e1c02cf7fedb8d1cf3bab52c8d/biobb_common-5.2.0-py3-none-any.whl (from https://pypi.org/simple/biobb-common/) (requires-python:>=3.10) 2026-03-05T04:27:14,640 Found link https://files.pythonhosted.org/packages/62/31/c71e8a82c6e62bbc0b9027f14ae204a5490aee45ef0ef406a8a26bdc81cc/biobb_common-5.2.0.tar.gz (from https://pypi.org/simple/biobb-common/) (requires-python:>=3.10), version: 5.2.0 2026-03-05T04:27:14,641 Skipping link: No binaries permitted for biobb-common: https://files.pythonhosted.org/packages/f4/c2/9860fd576a0ea291737dd9f4d3168013372cab37352b7a00d0890494b971/biobb_common-5.2.1-py3-none-any.whl (from https://pypi.org/simple/biobb-common/) (requires-python:>=3.10) 2026-03-05T04:27:14,643 Found link https://files.pythonhosted.org/packages/88/1d/671df1279ded70e47d17afc86a1ad56084767953c842d42bc2bac4770747/biobb_common-5.2.1.tar.gz (from https://pypi.org/simple/biobb-common/) (requires-python:>=3.10), version: 5.2.1 2026-03-05T04:27:14,645 Skipping link: No binaries permitted for biobb-common: https://files.pythonhosted.org/packages/b0/ed/038e9768c85f22c369fa8339474a7ce9a2c3cc8a3c302a2fec1cc78e0353/biobb_common-5.2.2-py3-none-any.whl (from https://pypi.org/simple/biobb-common/) (requires-python:>=3.10) 2026-03-05T04:27:14,647 Found link https://files.pythonhosted.org/packages/d8/ed/24dbd5a331417a8892ba3850e766e656863a26b6eb1da1f59543b03924fc/biobb_common-5.2.2.tar.gz (from https://pypi.org/simple/biobb-common/) (requires-python:>=3.10), version: 5.2.2 2026-03-05T04:27:14,650 Fetching project page and analyzing links: https://www.piwheels.org/simple/biobb-common/ 2026-03-05T04:27:14,651 Getting page https://www.piwheels.org/simple/biobb-common/ 2026-03-05T04:27:14,653 Found index url https://www.piwheels.org/simple 2026-03-05T04:27:14,821 Fetched page https://www.piwheels.org/simple/biobb-common/ as text/html 2026-03-05T04:27:14,831 Skipping link: No binaries permitted for biobb-common: https://archive1.piwheels.org/simple/biobb-common/biobb_common-5.2.1-py3-none-any.whl#sha256=af8cbe6f3966c7a18d1e243a7da834b37c7b3c4152ef9cf36ea55c8c2c9fbe86 (from https://www.piwheels.org/simple/biobb-common/) (requires-python:>=3.10) 2026-03-05T04:27:14,833 Skipping link: No binaries permitted for biobb-common: https://archive1.piwheels.org/simple/biobb-common/biobb_common-5.2.0-py3-none-any.whl#sha256=a939547cf3c94a64d479447d757ff765a52a89f6479d233be8244bbae8add402 (from https://www.piwheels.org/simple/biobb-common/) (requires-python:>=3.10) 2026-03-05T04:27:14,835 Skipping link: No binaries permitted for biobb-common: https://archive1.piwheels.org/simple/biobb-common/biobb_common-5.1.1-py3-none-any.whl#sha256=3144e93b4dbdc666a37c37830e779ac6a9b41dda7133aa213f8a0b9bf2238285 (from https://www.piwheels.org/simple/biobb-common/) (requires-python:>=3.9) 2026-03-05T04:27:14,837 Skipping link: No binaries permitted for biobb-common: https://archive1.piwheels.org/simple/biobb-common/biobb_common-5.1.0-py3-none-any.whl#sha256=2c149d4d53ab1b0788ce15f7d3742e95dd793fadb38966d9b93f2008f2f6af17 (from https://www.piwheels.org/simple/biobb-common/) (requires-python:>=3.9) 2026-03-05T04:27:14,840 Skipping link: No binaries permitted for biobb-common: https://archive1.piwheels.org/simple/biobb-common/biobb_common-5.0.1-py3-none-any.whl#sha256=08ad463441f5fa8ba3bd4029ffb95967cf3f9aedeea9da93f41f3f90c2100fc7 (from https://www.piwheels.org/simple/biobb-common/) (requires-python:>=3.9) 2026-03-05T04:27:14,842 Skipping link: No binaries permitted for biobb-common: https://archive1.piwheels.org/simple/biobb-common/biobb_common-5.0.0-py3-none-any.whl#sha256=195704daf6d9f7a19933af0f25b68d85dc051436d511c2f0764e7b9ad83c47a2 (from https://www.piwheels.org/simple/biobb-common/) (requires-python:>=3.9) 2026-03-05T04:27:14,844 Skipping link: No binaries permitted for biobb-common: https://archive1.piwheels.org/simple/biobb-common/biobb_common-4.2.0-py3-none-any.whl#sha256=e669410b27fde4b72dec104529370d2a4d011172c055712583477cda8069eee5 (from https://www.piwheels.org/simple/biobb-common/) (requires-python:>=3.8) 2026-03-05T04:27:14,846 Skipping link: No binaries permitted for biobb-common: https://archive1.piwheels.org/simple/biobb-common/biobb_common-4.1.0-py3-none-any.whl#sha256=64ab05312d647e4b49c13e752817bbec317937bea4e160b41ea0727d245bff5c (from https://www.piwheels.org/simple/biobb-common/) (requires-python:>=3.8) 2026-03-05T04:27:14,848 Skipping link: No binaries permitted for biobb-common: https://archive1.piwheels.org/simple/biobb-common/biobb_common-4.0.0-py3-none-any.whl#sha256=653feb0ce5b8b93b65ecce97ae0c212f4c8ba34706c2782917f6dda40af77de3 (from https://www.piwheels.org/simple/biobb-common/) (requires-python:>=3.7,<=3.10) 2026-03-05T04:27:14,850 Skipping link: No binaries permitted for biobb-common: https://archive1.piwheels.org/simple/biobb-common/biobb_common-3.9.0-py3-none-any.whl#sha256=8f63271c0ec62b1d3b0ca479e040510a449d15396b4ae8eb9c386a4cfe7e5034 (from https://www.piwheels.org/simple/biobb-common/) (requires-python:>=3.7,<3.10) 2026-03-05T04:27:14,851 Skipping link: No binaries permitted for biobb-common: https://archive1.piwheels.org/simple/biobb-common/biobb_common-3.8.1-py3-none-any.whl#sha256=dae9749e1f31aa2d418693f995639be3df1ba89046ec23b6a3f30d65df9eb955 (from https://www.piwheels.org/simple/biobb-common/) (requires-python:>=3.7) 2026-03-05T04:27:14,854 Skipping link: No binaries permitted for biobb-common: https://archive1.piwheels.org/simple/biobb-common/biobb_common-3.8.0-py3-none-any.whl#sha256=45eb220d07651d07ff15e16b9b6b45cfab9795b12d11de62d0db9aa0c82a9f27 (from https://www.piwheels.org/simple/biobb-common/) (requires-python:>=3.7) 2026-03-05T04:27:14,857 Skipping link: No binaries permitted for biobb-common: https://archive1.piwheels.org/simple/biobb-common/biobb_common-3.7.0-py3-none-any.whl#sha256=5085489b03b0233979e5b1f1b9358ef5f07daaf833d6ff945285ca116b60a902 (from https://www.piwheels.org/simple/biobb-common/) (requires-python:==3.7.*) 2026-03-05T04:27:14,859 Skipping link: No binaries permitted for biobb-common: https://archive1.piwheels.org/simple/biobb-common/biobb_common-3.6.0-py3-none-any.whl#sha256=d004cdff66a825a5ad21f1bfd25feaf823b97d8e72f0eca2da867b16ea5b545e (from https://www.piwheels.org/simple/biobb-common/) (requires-python:==3.7.*) 2026-03-05T04:27:14,861 Skipping link: No binaries permitted for biobb-common: https://archive1.piwheels.org/simple/biobb-common/biobb_common-3.5.1-py3-none-any.whl#sha256=78c1eabab884dc319a5573ef3fdade03a72b2184958280ceeec0c0bc3d1ffc6e (from https://www.piwheels.org/simple/biobb-common/) (requires-python:==3.7.*) 2026-03-05T04:27:14,863 Skipping link: No binaries permitted for biobb-common: https://archive1.piwheels.org/simple/biobb-common/biobb_common-3.5.0-py3-none-any.whl#sha256=1fb01c465893c08ef4effe8f7724f13ad487522efae8fa23d8b5fc333728463f (from https://www.piwheels.org/simple/biobb-common/) (requires-python:==3.7.*) 2026-03-05T04:27:14,863 Skipping link: No binaries permitted for biobb-common: https://archive1.piwheels.org/simple/biobb-common/biobb_common-3.0.1-py3-none-any.whl#sha256=4c96506f33d4cddf0ad4911458f9b2be08e3b86b3383c6e8a401bd6f085034eb (from https://www.piwheels.org/simple/biobb-common/) (requires-python:==3.7.*) 2026-03-05T04:27:14,864 Skipping link: No binaries permitted for biobb-common: https://archive1.piwheels.org/simple/biobb-common/biobb_common-3.0.0-py3-none-any.whl#sha256=36a676d19c294eee249a924f95df4b6290bc1a7f12c19a1fb9819ec7c576dca7 (from https://www.piwheels.org/simple/biobb-common/) (requires-python:==3.7.*) 2026-03-05T04:27:14,864 Skipping link: No binaries permitted for biobb-common: https://archive1.piwheels.org/simple/biobb-common/biobb_common-0.1.2-py3-none-any.whl#sha256=274c8a9cb8539476d6b48fa2ce890fcffb14ae05b4345bca20a663b63ef16c6b (from https://www.piwheels.org/simple/biobb-common/) (requires-python:>=3) 2026-03-05T04:27:14,865 Skipping link: No binaries permitted for biobb-common: https://archive1.piwheels.org/simple/biobb-common/biobb_common-0.1.0-py3-none-any.whl#sha256=5be2889bbd1c9bb60e1ad2b580751962e5389a6816ddf32d121e3ef94ca8f266 (from https://www.piwheels.org/simple/biobb-common/) (requires-python:>=3) 2026-03-05T04:27:14,866 Skipping link: No binaries permitted for biobb-common: https://archive1.piwheels.org/simple/biobb-common/biobb_common-0.0.9-py3-none-any.whl#sha256=f1549b73d8292356d8eed6e0ca8763da60e5cfa10da47bd4a562251c7fdcb307 (from https://www.piwheels.org/simple/biobb-common/) (requires-python:>=3) 2026-03-05T04:27:14,866 Skipping link: No binaries permitted for biobb-common: https://archive1.piwheels.org/simple/biobb-common/biobb_common-0.0.8-py3-none-any.whl#sha256=eac3dce0ded89886d3edf386cf334c28ee614312348e52ea21750eb1268c87b4 (from https://www.piwheels.org/simple/biobb-common/) (requires-python:>=3) 2026-03-05T04:27:14,867 Skipping link: No binaries permitted for biobb-common: https://archive1.piwheels.org/simple/biobb-common/biobb_common-0.0.6-py3-none-any.whl#sha256=2360f02d71a91e957a22079c58f5a85f40f121286883d347cfb848cf75659723 (from https://www.piwheels.org/simple/biobb-common/) (requires-python:>=3) 2026-03-05T04:27:14,868 Skipping link: No binaries permitted for biobb-common: https://archive1.piwheels.org/simple/biobb-common/biobb_common-0.0.5-py3-none-any.whl#sha256=af1f39077addbd6c2f8a84d6e566ff75c4f31f293d22b36557ca5aebe52e6cb5 (from https://www.piwheels.org/simple/biobb-common/) (requires-python:>=3.5) 2026-03-05T04:27:14,869 Skipping link: No binaries permitted for biobb-common: https://archive1.piwheels.org/simple/biobb-common/biobb_common-0.0.4-py3-none-any.whl#sha256=2668431408eb3a4edf20402f70aa06bf360fa054846640e0813fabd6b49cb810 (from https://www.piwheels.org/simple/biobb-common/) (requires-python:~=3.6) 2026-03-05T04:27:14,871 Skipping link: No binaries permitted for biobb-common: https://archive1.piwheels.org/simple/biobb-common/biobb_common-0.0.3-py3-none-any.whl#sha256=1bdca5cdc8e83609522dfd54c2f68aaabc3eca8c0d138821750b213987eb08d7 (from https://www.piwheels.org/simple/biobb-common/) (requires-python:~=3.0) 2026-03-05T04:27:14,873 Skipping link: not a file: https://www.piwheels.org/simple/biobb-common/ 2026-03-05T04:27:14,875 Skipping link: not a file: https://pypi.org/simple/biobb-common/ 2026-03-05T04:27:14,902 Given no hashes to check 1 links for project 'biobb-common': discarding no candidates 2026-03-05T04:27:14,921 Collecting biobb-common==5.2.2 2026-03-05T04:27:14,925 Created temporary directory: /tmp/pip-unpack-l8cx4f3t 2026-03-05T04:27:15,134 Downloading biobb_common-5.2.2.tar.gz (30 kB) 2026-03-05T04:27:15,361 Added biobb-common==5.2.2 from https://files.pythonhosted.org/packages/d8/ed/24dbd5a331417a8892ba3850e766e656863a26b6eb1da1f59543b03924fc/biobb_common-5.2.2.tar.gz to build tracker '/tmp/pip-build-tracker-g46ubicp' 2026-03-05T04:27:15,364 Running setup.py (path:/tmp/pip-wheel-x23wnb5r/biobb-common_61aa9d9169d04152bd78d2712e542975/setup.py) egg_info for package biobb-common 2026-03-05T04:27:15,366 Created temporary directory: /tmp/pip-pip-egg-info-7sspdwqo 2026-03-05T04:27:15,368 Preparing metadata (setup.py): started 2026-03-05T04:27:15,370 Running command python setup.py egg_info 2026-03-05T04:27:16,338 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-03-05T04:27:16,338 !! 2026-03-05T04:27:16,339 ******************************************************************************** 2026-03-05T04:27:16,340 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-03-05T04:27:16,341 License :: OSI Approved :: Apache Software License 2026-03-05T04:27:16,342 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-03-05T04:27:16,343 ******************************************************************************** 2026-03-05T04:27:16,344 !! 2026-03-05T04:27:16,345 self._finalize_license_expression() 2026-03-05T04:27:16,367 running egg_info 2026-03-05T04:27:16,394 creating /tmp/pip-pip-egg-info-7sspdwqo/biobb_common.egg-info 2026-03-05T04:27:16,395 writing /tmp/pip-pip-egg-info-7sspdwqo/biobb_common.egg-info/PKG-INFO 2026-03-05T04:27:16,399 writing dependency_links to /tmp/pip-pip-egg-info-7sspdwqo/biobb_common.egg-info/dependency_links.txt 2026-03-05T04:27:16,400 writing entry points to /tmp/pip-pip-egg-info-7sspdwqo/biobb_common.egg-info/entry_points.txt 2026-03-05T04:27:16,402 writing requirements to /tmp/pip-pip-egg-info-7sspdwqo/biobb_common.egg-info/requires.txt 2026-03-05T04:27:16,403 writing top-level names to /tmp/pip-pip-egg-info-7sspdwqo/biobb_common.egg-info/top_level.txt 2026-03-05T04:27:16,404 writing manifest file '/tmp/pip-pip-egg-info-7sspdwqo/biobb_common.egg-info/SOURCES.txt' 2026-03-05T04:27:16,500 reading manifest file '/tmp/pip-pip-egg-info-7sspdwqo/biobb_common.egg-info/SOURCES.txt' 2026-03-05T04:27:16,501 adding license file 'LICENSE' 2026-03-05T04:27:16,504 writing manifest file '/tmp/pip-pip-egg-info-7sspdwqo/biobb_common.egg-info/SOURCES.txt' 2026-03-05T04:27:16,611 Preparing metadata (setup.py): finished with status 'done' 2026-03-05T04:27:16,616 Source in /tmp/pip-wheel-x23wnb5r/biobb-common_61aa9d9169d04152bd78d2712e542975 has version 5.2.2, which satisfies requirement biobb-common==5.2.2 from https://files.pythonhosted.org/packages/d8/ed/24dbd5a331417a8892ba3850e766e656863a26b6eb1da1f59543b03924fc/biobb_common-5.2.2.tar.gz 2026-03-05T04:27:16,617 Removed biobb-common==5.2.2 from https://files.pythonhosted.org/packages/d8/ed/24dbd5a331417a8892ba3850e766e656863a26b6eb1da1f59543b03924fc/biobb_common-5.2.2.tar.gz from build tracker '/tmp/pip-build-tracker-g46ubicp' 2026-03-05T04:27:16,623 Created temporary directory: /tmp/pip-unpack-h10qrvdf 2026-03-05T04:27:16,623 Building wheels for collected packages: biobb-common 2026-03-05T04:27:16,628 Created temporary directory: /tmp/pip-wheel-fd4dz3kb 2026-03-05T04:27:16,629 Building wheel for biobb-common (setup.py): started 2026-03-05T04:27:16,630 Destination directory: /tmp/pip-wheel-fd4dz3kb 2026-03-05T04:27:16,630 Running command python setup.py bdist_wheel 2026-03-05T04:27:17,472 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:765: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2026-03-05T04:27:17,472 !! 2026-03-05T04:27:17,473 ******************************************************************************** 2026-03-05T04:27:17,474 Please consider removing the following classifiers in favor of a SPDX license expression: 2026-03-05T04:27:17,475 License :: OSI Approved :: Apache Software License 2026-03-05T04:27:17,476 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2026-03-05T04:27:17,476 ******************************************************************************** 2026-03-05T04:27:17,477 !! 2026-03-05T04:27:17,478 self._finalize_license_expression() 2026-03-05T04:27:17,478 running bdist_wheel 2026-03-05T04:27:17,611 running build 2026-03-05T04:27:17,612 running build_py 2026-03-05T04:27:17,646 creating build/lib/biobb_common 2026-03-05T04:27:17,648 copying biobb_common/__init__.py -> build/lib/biobb_common 2026-03-05T04:27:17,650 creating build/lib/biobb_common/command_wrapper 2026-03-05T04:27:17,651 copying biobb_common/command_wrapper/cmd_wrapper.py -> build/lib/biobb_common/command_wrapper 2026-03-05T04:27:17,654 copying biobb_common/command_wrapper/__init__.py -> build/lib/biobb_common/command_wrapper 2026-03-05T04:27:17,656 creating build/lib/biobb_common/tools 2026-03-05T04:27:17,657 copying biobb_common/tools/file_utils.py -> build/lib/biobb_common/tools 2026-03-05T04:27:17,660 copying biobb_common/tools/__init__.py -> build/lib/biobb_common/tools 2026-03-05T04:27:17,662 copying biobb_common/tools/test_fixtures.py -> build/lib/biobb_common/tools 2026-03-05T04:27:17,665 creating build/lib/biobb_common/configuration 2026-03-05T04:27:17,666 copying biobb_common/configuration/settings.py -> build/lib/biobb_common/configuration 2026-03-05T04:27:17,669 copying biobb_common/configuration/__init__.py -> build/lib/biobb_common/configuration 2026-03-05T04:27:17,671 creating build/lib/biobb_common/generic 2026-03-05T04:27:17,672 copying biobb_common/generic/folder_test.py -> build/lib/biobb_common/generic 2026-03-05T04:27:17,674 copying biobb_common/generic/biobb_object.py -> build/lib/biobb_common/generic 2026-03-05T04:27:17,677 copying biobb_common/generic/__init__.py -> build/lib/biobb_common/generic 2026-03-05T04:27:17,680 creating build/lib/biobb_common/test 2026-03-05T04:27:17,681 copying biobb_common/test/__init__.py -> build/lib/biobb_common/test 2026-03-05T04:27:17,687 copying biobb_common/py.typed -> build/lib/biobb_common 2026-03-05T04:27:17,723 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2026-03-05T04:27:17,723 !! 2026-03-05T04:27:17,725 ******************************************************************************** 2026-03-05T04:27:17,725 Please avoid running ``setup.py`` directly. 2026-03-05T04:27:17,726 Instead, use pypa/build, pypa/installer or other 2026-03-05T04:27:17,727 standards-based tools. 2026-03-05T04:27:17,728 This deprecation is overdue, please update your project and remove deprecated 2026-03-05T04:27:17,729 calls to avoid build errors in the future. 2026-03-05T04:27:17,729 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2026-03-05T04:27:17,730 ******************************************************************************** 2026-03-05T04:27:17,731 !! 2026-03-05T04:27:17,731 self.initialize_options() 2026-03-05T04:27:17,752 installing to build/bdist.linux-armv7l/wheel 2026-03-05T04:27:17,753 running install 2026-03-05T04:27:17,776 running install_lib 2026-03-05T04:27:17,811 creating build/bdist.linux-armv7l/wheel 2026-03-05T04:27:17,814 creating build/bdist.linux-armv7l/wheel/biobb_common 2026-03-05T04:27:17,818 creating build/bdist.linux-armv7l/wheel/biobb_common/command_wrapper 2026-03-05T04:27:17,820 copying build/lib/biobb_common/command_wrapper/cmd_wrapper.py -> build/bdist.linux-armv7l/wheel/./biobb_common/command_wrapper 2026-03-05T04:27:17,823 copying build/lib/biobb_common/command_wrapper/__init__.py -> build/bdist.linux-armv7l/wheel/./biobb_common/command_wrapper 2026-03-05T04:27:17,827 copying build/lib/biobb_common/py.typed -> build/bdist.linux-armv7l/wheel/./biobb_common 2026-03-05T04:27:17,831 creating build/bdist.linux-armv7l/wheel/biobb_common/tools 2026-03-05T04:27:17,833 copying build/lib/biobb_common/tools/file_utils.py -> build/bdist.linux-armv7l/wheel/./biobb_common/tools 2026-03-05T04:27:17,837 copying build/lib/biobb_common/tools/__init__.py -> build/bdist.linux-armv7l/wheel/./biobb_common/tools 2026-03-05T04:27:17,839 copying build/lib/biobb_common/tools/test_fixtures.py -> build/bdist.linux-armv7l/wheel/./biobb_common/tools 2026-03-05T04:27:17,843 copying build/lib/biobb_common/__init__.py -> build/bdist.linux-armv7l/wheel/./biobb_common 2026-03-05T04:27:17,846 creating build/bdist.linux-armv7l/wheel/biobb_common/configuration 2026-03-05T04:27:17,847 copying build/lib/biobb_common/configuration/settings.py -> build/bdist.linux-armv7l/wheel/./biobb_common/configuration 2026-03-05T04:27:17,850 copying build/lib/biobb_common/configuration/__init__.py -> build/bdist.linux-armv7l/wheel/./biobb_common/configuration 2026-03-05T04:27:17,854 creating build/bdist.linux-armv7l/wheel/biobb_common/generic 2026-03-05T04:27:17,855 copying build/lib/biobb_common/generic/folder_test.py -> build/bdist.linux-armv7l/wheel/./biobb_common/generic 2026-03-05T04:27:17,860 copying build/lib/biobb_common/generic/biobb_object.py -> build/bdist.linux-armv7l/wheel/./biobb_common/generic 2026-03-05T04:27:17,863 copying build/lib/biobb_common/generic/__init__.py -> build/bdist.linux-armv7l/wheel/./biobb_common/generic 2026-03-05T04:27:17,866 creating build/bdist.linux-armv7l/wheel/biobb_common/test 2026-03-05T04:27:17,867 copying build/lib/biobb_common/test/__init__.py -> build/bdist.linux-armv7l/wheel/./biobb_common/test 2026-03-05T04:27:17,868 running install_egg_info 2026-03-05T04:27:17,907 running egg_info 2026-03-05T04:27:17,935 writing biobb_common.egg-info/PKG-INFO 2026-03-05T04:27:17,939 writing dependency_links to biobb_common.egg-info/dependency_links.txt 2026-03-05T04:27:17,940 writing entry points to biobb_common.egg-info/entry_points.txt 2026-03-05T04:27:17,942 writing requirements to biobb_common.egg-info/requires.txt 2026-03-05T04:27:17,944 writing top-level names to biobb_common.egg-info/top_level.txt 2026-03-05T04:27:17,982 reading manifest file 'biobb_common.egg-info/SOURCES.txt' 2026-03-05T04:27:17,986 adding license file 'LICENSE' 2026-03-05T04:27:17,989 writing manifest file 'biobb_common.egg-info/SOURCES.txt' 2026-03-05T04:27:17,990 Copying biobb_common.egg-info to build/bdist.linux-armv7l/wheel/./biobb_common-5.2.2-py3.11.egg-info 2026-03-05T04:27:18,006 running install_scripts 2026-03-05T04:27:18,021 creating build/bdist.linux-armv7l/wheel/biobb_common-5.2.2.dist-info/WHEEL 2026-03-05T04:27:18,023 creating '/tmp/pip-wheel-fd4dz3kb/biobb_common-5.2.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-03-05T04:27:18,025 adding 'biobb_common/__init__.py' 2026-03-05T04:27:18,027 adding 'biobb_common/py.typed' 2026-03-05T04:27:18,028 adding 'biobb_common/command_wrapper/__init__.py' 2026-03-05T04:27:18,030 adding 'biobb_common/command_wrapper/cmd_wrapper.py' 2026-03-05T04:27:18,031 adding 'biobb_common/configuration/__init__.py' 2026-03-05T04:27:18,033 adding 'biobb_common/configuration/settings.py' 2026-03-05T04:27:18,035 adding 'biobb_common/generic/__init__.py' 2026-03-05T04:27:18,038 adding 'biobb_common/generic/biobb_object.py' 2026-03-05T04:27:18,040 adding 'biobb_common/generic/folder_test.py' 2026-03-05T04:27:18,042 adding 'biobb_common/test/__init__.py' 2026-03-05T04:27:18,044 adding 'biobb_common/tools/__init__.py' 2026-03-05T04:27:18,048 adding 'biobb_common/tools/file_utils.py' 2026-03-05T04:27:18,050 adding 'biobb_common/tools/test_fixtures.py' 2026-03-05T04:27:18,054 adding 'biobb_common-5.2.2.dist-info/licenses/LICENSE' 2026-03-05T04:27:18,055 adding 'biobb_common-5.2.2.dist-info/METADATA' 2026-03-05T04:27:18,056 adding 'biobb_common-5.2.2.dist-info/WHEEL' 2026-03-05T04:27:18,057 adding 'biobb_common-5.2.2.dist-info/entry_points.txt' 2026-03-05T04:27:18,058 adding 'biobb_common-5.2.2.dist-info/top_level.txt' 2026-03-05T04:27:18,059 adding 'biobb_common-5.2.2.dist-info/RECORD' 2026-03-05T04:27:18,061 removing build/bdist.linux-armv7l/wheel 2026-03-05T04:27:18,179 Building wheel for biobb-common (setup.py): finished with status 'done' 2026-03-05T04:27:18,182 Created wheel for biobb-common: filename=biobb_common-5.2.2-py3-none-any.whl size=32814 sha256=408882cfcce8b3acfec1b238ef8af149aa5115db12bb07b3c44a96837280ea7a 2026-03-05T04:27:18,183 Stored in directory: /tmp/pip-ephem-wheel-cache-23_jzny5/wheels/3e/c0/6c/ace62b04fe19b3364805e35d8905e59f446d4066282f71483b 2026-03-05T04:27:18,195 Successfully built biobb-common 2026-03-05T04:27:18,199 Removed build tracker: '/tmp/pip-build-tracker-g46ubicp'