2026-03-06T18:09:55,033 Created temporary directory: /tmp/pip-ephem-wheel-cache-oab1i6io 2026-03-06T18:09:55,039 Created temporary directory: /tmp/pip-req-tracker-9ndjftp3 2026-03-06T18:09:55,039 Initialized build tracking at /tmp/pip-req-tracker-9ndjftp3 2026-03-06T18:09:55,040 Created build tracker: /tmp/pip-req-tracker-9ndjftp3 2026-03-06T18:09:55,040 Entered build tracker: /tmp/pip-req-tracker-9ndjftp3 2026-03-06T18:09:55,041 Created temporary directory: /tmp/pip-wheel-shwx2ai1 2026-03-06T18:09:55,087 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple, https://www.piwheels.org/simple 2026-03-06T18:09:55,091 2 location(s) to search for versions of kssdutils: 2026-03-06T18:09:55,091 * https://pypi.org/simple/kssdutils/ 2026-03-06T18:09:55,091 * https://www.piwheels.org/simple/kssdutils/ 2026-03-06T18:09:55,091 Fetching project page and analyzing links: https://pypi.org/simple/kssdutils/ 2026-03-06T18:09:55,093 Getting page https://pypi.org/simple/kssdutils/ 2026-03-06T18:09:55,096 Found index url https://pypi.org/simple 2026-03-06T18:09:55,105 Starting new HTTPS connection (1): pypi.org:443 2026-03-06T18:09:55,276 https://pypi.org:443 "GET /simple/kssdutils/ HTTP/1.1" 200 1800 2026-03-06T18:09:55,455 Found link https://files.pythonhosted.org/packages/61/ef/1bdb91b53dbe31ea0be28ab2c2292994b6228b357a8d54b69ac642f81f01/kssdutils-1.0.0.tar.gz#sha256=8d679d5f963a767a4df5ded96f9aa2cd10524d23f7d418797ae62baaca759e1f (from https://pypi.org/simple/kssdutils/), version: 1.0.0 2026-03-06T18:09:55,456 Found link https://files.pythonhosted.org/packages/6f/f6/cc67acf92ea770b5f6a8bd97d375432881861935beafe9ebd4031a73482c/kssdutils-1.0.1.tar.gz#sha256=cc08f86ac8152ac9a7f506f8d2f4808dca0754cebd06565f3de1cb7e639a310c (from https://pypi.org/simple/kssdutils/), version: 1.0.1 2026-03-06T18:09:55,457 Found link https://files.pythonhosted.org/packages/57/17/dd41697db7220423d0ab77f9f035b9a347edc1edefc2c35d9890178cbe17/kssdutils-1.0.2.tar.gz#sha256=384edc154817d0cbea825d78f0d58bee3fbe1811532e1f8ea77b8b7cb1e7fc84 (from https://pypi.org/simple/kssdutils/), version: 1.0.2 2026-03-06T18:09:55,458 Found link https://files.pythonhosted.org/packages/3e/92/7a94130bd54e0e3dd20c1a609aef2f24875b86e9d61752f63b500d3f86f5/kssdutils-1.0.3.tar.gz#sha256=412ff6a0cfd2bd03e01e83c8cb7cb663679b530682d69aad8733e696d8a2fae7 (from https://pypi.org/simple/kssdutils/), version: 1.0.3 2026-03-06T18:09:55,459 Found link https://files.pythonhosted.org/packages/42/01/15ec102f7ac6b4fc3158ba60de64598a005cefffc773fa69eecbd3c9b016/kssdutils-1.0.5.tar.gz#sha256=34a917037f0205223ec2e2b6a87da9381a3c5224a109a2ca92f010b72824f284 (from https://pypi.org/simple/kssdutils/), version: 1.0.5 2026-03-06T18:09:55,459 Found link https://files.pythonhosted.org/packages/aa/08/08fa5f76478fd3dbe9534ad21332b5dc03826197935c2b696e189af49f0b/kssdutils-1.0.6.tar.gz#sha256=9e8e97befc6bcdf3bc904d558ac9e6a0bddf4458096aaaa5f0ef1ab344223ed5 (from https://pypi.org/simple/kssdutils/), version: 1.0.6 2026-03-06T18:09:55,460 Found link https://files.pythonhosted.org/packages/78/17/7776b7c3b149fedfb0fba98bce07fdf08cb53773dafa174f7fda9ce4df55/kssdutils-1.0.7.tar.gz#sha256=f5862cfef7ea29d8c668475cdedf83af1b6c352d24827694a07af0fc82597032 (from https://pypi.org/simple/kssdutils/), version: 1.0.7 2026-03-06T18:09:55,461 Found link https://files.pythonhosted.org/packages/a7/50/138f2b5f98dcd2327609362e505af19857468da67dba88eaf6c8d8fdb83a/kssdutils-1.1.0.tar.gz#sha256=07328ca56be9994670fea19e700d7c9b8f67c317bc8731c48939dd54e1cba32e (from https://pypi.org/simple/kssdutils/), version: 1.1.0 2026-03-06T18:09:55,462 Found link https://files.pythonhosted.org/packages/be/be/659d775f3dd37e727d782fa46b7b665e69a59c78312fa5fc1bad8640f980/kssdutils-1.1.2.tar.gz#sha256=f004a475c18f6a22a770cd9f6dd981521f2817c11b8f848aad411d59127df50d (from https://pypi.org/simple/kssdutils/), version: 1.1.2 2026-03-06T18:09:55,462 Found link https://files.pythonhosted.org/packages/d0/e9/badb25888a9e48aa82e2389e848aff81ae6affd17af96622974dc314ae52/kssdutils-1.1.3.tar.gz#sha256=50dd2c513e94169e8fff9f28ff60e4bc059f409b49c3cff387d3ef49564f3c82 (from https://pypi.org/simple/kssdutils/), version: 1.1.3 2026-03-06T18:09:55,463 Found link https://files.pythonhosted.org/packages/b3/43/18e812a7529c356cfa20627f201f1956e4b8203e1db782861ad6e5900bf8/kssdutils-1.1.4.tar.gz#sha256=4f833f05e3fbed227f6cba1b2db89b12a0dbe7fc4634fa9c89c20446c3efab1b (from https://pypi.org/simple/kssdutils/), version: 1.1.4 2026-03-06T18:09:55,464 Found link https://files.pythonhosted.org/packages/98/8c/0eb4850f10a9da51072d7be474ecffd0f808423f21838f543dc88db7ddd2/kssdutils-1.1.5.tar.gz#sha256=416f323a70d8f556b186cc63e8f0b2e4b0b2ce9d3d7f716e04bb2a3f7d08e86c (from https://pypi.org/simple/kssdutils/), version: 1.1.5 2026-03-06T18:09:55,465 Found link https://files.pythonhosted.org/packages/c3/44/c52bfc36ee73ebbc978099403a176e76446f23b1691c9df71bd38bbe6430/kssdutils-1.1.7.tar.gz#sha256=837148a9c069b8be1673edc80e4e380e956ed68df704095b6718e9ed927db051 (from https://pypi.org/simple/kssdutils/), version: 1.1.7 2026-03-06T18:09:55,465 Found link https://files.pythonhosted.org/packages/a8/d7/8426d81d46965dcb35320a45f5b457453be5160b18551902b31860952f69/kssdutils-1.1.8.tar.gz#sha256=54608ccc25c64db2983ef65844a7932bc6d8cc53afd1370ca8073409d488df2e (from https://pypi.org/simple/kssdutils/), version: 1.1.8 2026-03-06T18:09:55,466 Found link https://files.pythonhosted.org/packages/4e/b4/5e5af5267d953d53d92b1f74c11fac8874cc94a7e1f5a0e699ba3ecc57f2/kssdutils-1.1.9.tar.gz#sha256=fdfc3cd69b375b4cfa96aed7837bc1214a2d1744234dadd729b9b06963ae0769 (from https://pypi.org/simple/kssdutils/), version: 1.1.9 2026-03-06T18:09:55,467 Found link https://files.pythonhosted.org/packages/bd/e0/d7aec62c770afea4b416e12c6e0afcb31d4d07c6a9320c903e87821c1512/kssdutils-1.2.0.tar.gz#sha256=d90d21776b50649c2175b53bc0cb02279ea0a75159e76ad86f6f17bd08368b3f (from https://pypi.org/simple/kssdutils/), version: 1.2.0 2026-03-06T18:09:55,467 Found link https://files.pythonhosted.org/packages/bc/23/9cb4f9e681bcb9f0b76a4ba9ba04ee7196be39eb751f096b15c73846da91/kssdutils-1.2.1.tar.gz#sha256=27ed3758b8ba203ede482c8d5982a96003c89d11f526436f6cce84056aa088d8 (from https://pypi.org/simple/kssdutils/), version: 1.2.1 2026-03-06T18:09:55,468 Fetching project page and analyzing links: https://www.piwheels.org/simple/kssdutils/ 2026-03-06T18:09:55,469 Getting page https://www.piwheels.org/simple/kssdutils/ 2026-03-06T18:09:55,471 Found index url https://www.piwheels.org/simple 2026-03-06T18:09:55,475 Starting new HTTPS connection (1): www.piwheels.org:443 2026-03-06T18:09:55,594 https://www.piwheels.org:443 "GET /simple/kssdutils/ HTTP/1.1" 200 1888 2026-03-06T18:09:55,674 Skipping link: No binaries permitted for kssdutils: https://www.piwheels.org/simple/kssdutils/kssdutils-1.2.1-cp311-cp311-linux_armv6l.whl#sha256=9d55e37a6df79cb1066656b0f52692392178b3f97bda504b42bd688c9f56e70f (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,675 Skipping link: No binaries permitted for kssdutils: https://www.piwheels.org/simple/kssdutils/kssdutils-1.2.1-cp311-cp311-linux_armv7l.whl#sha256=9d55e37a6df79cb1066656b0f52692392178b3f97bda504b42bd688c9f56e70f (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,676 Skipping link: No binaries permitted for kssdutils: https://www.piwheels.org/simple/kssdutils/kssdutils-1.2.0-cp311-cp311-linux_armv6l.whl#sha256=f4620cb11cd680f7dcbbd7744c03dee2183ec0a4c4c6abd29bc599c70af26d1d (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,676 Skipping link: No binaries permitted for kssdutils: https://www.piwheels.org/simple/kssdutils/kssdutils-1.2.0-cp311-cp311-linux_armv7l.whl#sha256=f4620cb11cd680f7dcbbd7744c03dee2183ec0a4c4c6abd29bc599c70af26d1d (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,677 Skipping link: No binaries permitted for kssdutils: https://www.piwheels.org/simple/kssdutils/kssdutils-1.2.0-cp39-cp39-linux_armv6l.whl#sha256=0674b995d5f29ef2b9143b006e7cc27c8e11a011739c5415abbec13423c68cd1 (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,677 Skipping link: No binaries permitted for kssdutils: https://www.piwheels.org/simple/kssdutils/kssdutils-1.2.0-cp39-cp39-linux_armv7l.whl#sha256=0674b995d5f29ef2b9143b006e7cc27c8e11a011739c5415abbec13423c68cd1 (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,678 Skipping link: No binaries permitted for kssdutils: https://www.piwheels.org/simple/kssdutils/kssdutils-1.1.9-cp311-cp311-linux_armv6l.whl#sha256=4170c6f7b1539a2959a5c83dab6344741df3727fe6cd0c2f5f067e5bc498d13f (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,678 Skipping link: No binaries permitted for kssdutils: https://www.piwheels.org/simple/kssdutils/kssdutils-1.1.9-cp311-cp311-linux_armv7l.whl#sha256=4170c6f7b1539a2959a5c83dab6344741df3727fe6cd0c2f5f067e5bc498d13f (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,679 Skipping link: No binaries permitted for kssdutils: https://www.piwheels.org/simple/kssdutils/kssdutils-1.1.8-cp311-cp311-linux_armv6l.whl#sha256=1ca8d1a14ea2253a85ab097f8a97a065c394460f12019e954e44a8de87f5392c (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,679 Skipping link: No binaries permitted for kssdutils: https://www.piwheels.org/simple/kssdutils/kssdutils-1.1.8-cp311-cp311-linux_armv7l.whl#sha256=1ca8d1a14ea2253a85ab097f8a97a065c394460f12019e954e44a8de87f5392c (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,680 Skipping link: No binaries permitted for kssdutils: https://www.piwheels.org/simple/kssdutils/kssdutils-1.1.8-cp39-cp39-linux_armv6l.whl#sha256=a94391f6b776dcdd0dd75533da283828a5fc4b0a4fcb195c96189d4da6984850 (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,681 Skipping link: No binaries permitted for kssdutils: https://www.piwheels.org/simple/kssdutils/kssdutils-1.1.8-cp39-cp39-linux_armv7l.whl#sha256=a94391f6b776dcdd0dd75533da283828a5fc4b0a4fcb195c96189d4da6984850 (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,681 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.1.7-cp311-cp311-linux_armv6l.whl#sha256=5beb32a7772765a880c50ab75f1b8a504d6c960523a444ea7829d7fef3671c4c (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,682 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.1.7-cp311-cp311-linux_armv7l.whl#sha256=5beb32a7772765a880c50ab75f1b8a504d6c960523a444ea7829d7fef3671c4c (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,682 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.1.7-cp39-cp39-linux_armv6l.whl#sha256=bea859a11c139a17abe9233844b7d680aab56d553fc883a214cb8aea8147aa7c (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,683 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.1.7-cp39-cp39-linux_armv7l.whl#sha256=bea859a11c139a17abe9233844b7d680aab56d553fc883a214cb8aea8147aa7c (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,683 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.1.5-cp311-cp311-linux_armv6l.whl#sha256=954571c31f45999b6eeb2cc007104d4a864f065c6aac3ff584a2e5d01fe7d22f (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,684 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.1.5-cp311-cp311-linux_armv7l.whl#sha256=954571c31f45999b6eeb2cc007104d4a864f065c6aac3ff584a2e5d01fe7d22f (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,684 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.1.5-cp39-cp39-linux_armv6l.whl#sha256=109623235074cfc937bce9a38d6d20bcf42003659045c0bda63bb091408c003d (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,685 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.1.5-cp39-cp39-linux_armv7l.whl#sha256=109623235074cfc937bce9a38d6d20bcf42003659045c0bda63bb091408c003d (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,685 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.1.4-cp311-cp311-linux_armv6l.whl#sha256=887ef39ec2c7cd34700ce800859855937714cdcebb02dcbd1c99aa7266df6c1b (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,686 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.1.4-cp311-cp311-linux_armv7l.whl#sha256=887ef39ec2c7cd34700ce800859855937714cdcebb02dcbd1c99aa7266df6c1b (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,687 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.1.4-cp39-cp39-linux_armv6l.whl#sha256=c752a2d90aa02aedfa92d27348e83c6e3cecace8633c4e91679da40ada370a66 (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,687 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.1.4-cp39-cp39-linux_armv7l.whl#sha256=c752a2d90aa02aedfa92d27348e83c6e3cecace8633c4e91679da40ada370a66 (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,688 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.1.3-cp311-cp311-linux_armv6l.whl#sha256=5584c66cba9b3b3dc5863d4eadba8674b765a709b4c7abc210ce12f9e49d68a3 (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,688 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.1.3-cp311-cp311-linux_armv7l.whl#sha256=5584c66cba9b3b3dc5863d4eadba8674b765a709b4c7abc210ce12f9e49d68a3 (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,689 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.1.3-cp39-cp39-linux_armv6l.whl#sha256=0bc9a271bdbc41d568d8a3834e847d4a29d5af0a18cc86d8743ca8a193272a98 (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,689 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.1.3-cp39-cp39-linux_armv7l.whl#sha256=0bc9a271bdbc41d568d8a3834e847d4a29d5af0a18cc86d8743ca8a193272a98 (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,690 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.1.2-cp311-cp311-linux_armv6l.whl#sha256=aae5676066e2d651e6883867221d727acb24b9ccd831cc4209fb7b18df10cfbb (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,690 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.1.2-cp311-cp311-linux_armv7l.whl#sha256=aae5676066e2d651e6883867221d727acb24b9ccd831cc4209fb7b18df10cfbb (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,691 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.1.2-cp39-cp39-linux_armv6l.whl#sha256=e7719ceb9b4ce3c5cfbfa12e1b4e8d314e117ca845fd6bedcafe8abadb5ca1f3 (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,691 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.1.2-cp39-cp39-linux_armv7l.whl#sha256=e7719ceb9b4ce3c5cfbfa12e1b4e8d314e117ca845fd6bedcafe8abadb5ca1f3 (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,692 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.1.0-cp311-cp311-linux_armv6l.whl#sha256=0c8e77f57ec908176d8961c597a98abc9259dee9141399da1712be9b1d560bc8 (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,692 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.1.0-cp311-cp311-linux_armv7l.whl#sha256=0c8e77f57ec908176d8961c597a98abc9259dee9141399da1712be9b1d560bc8 (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,693 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.1.0-cp39-cp39-linux_armv6l.whl#sha256=8a0994f4f968bd25192b59f99dc7d482fae725cc841190d55a79c2ec3c47e0cd (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,693 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.1.0-cp39-cp39-linux_armv7l.whl#sha256=8a0994f4f968bd25192b59f99dc7d482fae725cc841190d55a79c2ec3c47e0cd (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,694 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.7-cp311-cp311-linux_armv6l.whl#sha256=c45bd36d62b251ee659d4aeaaca8255ff10d29d84edaf2551a0fed903f1a5fe3 (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,694 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.7-cp311-cp311-linux_armv7l.whl#sha256=c45bd36d62b251ee659d4aeaaca8255ff10d29d84edaf2551a0fed903f1a5fe3 (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,695 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.7-cp39-cp39-linux_armv6l.whl#sha256=fcc578373bf2b252b22da188e4ca939bebcc53786b1f302a901a5cf261df624e (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,695 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.7-cp39-cp39-linux_armv7l.whl#sha256=fcc578373bf2b252b22da188e4ca939bebcc53786b1f302a901a5cf261df624e (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,696 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.6-cp311-cp311-linux_armv6l.whl#sha256=24cea74c37c72ec3f541e6eca026f6a906455d0e0160dc7d0f4526ab89a58125 (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,697 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.6-cp311-cp311-linux_armv7l.whl#sha256=24cea74c37c72ec3f541e6eca026f6a906455d0e0160dc7d0f4526ab89a58125 (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,697 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.6-cp39-cp39-linux_armv6l.whl#sha256=bfe64af80d2aab63dccf6fb0418e3b806f4ee1b2fcff0eab77094040d2b6dca5 (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,698 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.6-cp39-cp39-linux_armv7l.whl#sha256=bfe64af80d2aab63dccf6fb0418e3b806f4ee1b2fcff0eab77094040d2b6dca5 (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,698 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.5-cp311-cp311-linux_armv6l.whl#sha256=29ec8af3f080743643fee31ce978f3d65a6d90b950248e2ed6827316567aaa62 (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,699 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.5-cp311-cp311-linux_armv7l.whl#sha256=29ec8af3f080743643fee31ce978f3d65a6d90b950248e2ed6827316567aaa62 (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,699 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.5-cp39-cp39-linux_armv6l.whl#sha256=fb21de5c7d85619ac9cc1fafe3280f0130178032b169f1cf7ceac0cb6326d42e (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,700 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.5-cp39-cp39-linux_armv7l.whl#sha256=fb21de5c7d85619ac9cc1fafe3280f0130178032b169f1cf7ceac0cb6326d42e (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,700 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.2-cp311-cp311-linux_armv6l.whl#sha256=85c10f6c3223fb99e39dfddbef722fd2913bd5c63f089283ce23dae20c6a4a4d (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,701 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.2-cp311-cp311-linux_armv7l.whl#sha256=85c10f6c3223fb99e39dfddbef722fd2913bd5c63f089283ce23dae20c6a4a4d (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,701 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.2-cp39-cp39-linux_armv6l.whl#sha256=809195defd92c452797e9a87d99cfa8217c9ca4800c4a57d3e669846368160b1 (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,702 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.2-cp39-cp39-linux_armv7l.whl#sha256=809195defd92c452797e9a87d99cfa8217c9ca4800c4a57d3e669846368160b1 (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,702 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.1-cp311-cp311-linux_armv6l.whl#sha256=88788d94e7e118cfdf4e2cb04c558d2032ffa4f9352b663efd1a76f098c9f31d (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,703 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.1-cp311-cp311-linux_armv7l.whl#sha256=88788d94e7e118cfdf4e2cb04c558d2032ffa4f9352b663efd1a76f098c9f31d (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,703 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.1-cp39-cp39-linux_armv6l.whl#sha256=29a695a62aae6fa18fcad3ae6bfc6bbe19f545f66740fde177ddbf23efa45d15 (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,704 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.1-cp39-cp39-linux_armv7l.whl#sha256=29a695a62aae6fa18fcad3ae6bfc6bbe19f545f66740fde177ddbf23efa45d15 (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,704 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.0-cp311-cp311-linux_armv6l.whl#sha256=e93f43f34a8ab412f6a0c97bc930a5c9c72997258d109e3f069a56b6270ff331 (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,705 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.0-cp311-cp311-linux_armv7l.whl#sha256=e93f43f34a8ab412f6a0c97bc930a5c9c72997258d109e3f069a56b6270ff331 (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,705 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.0-cp39-cp39-linux_armv6l.whl#sha256=0d9c0566cba326dbedbea1c1ea643cc81efe1b0b47b292f956e933d1a9fedb35 (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,706 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.0-cp39-cp39-linux_armv7l.whl#sha256=0d9c0566cba326dbedbea1c1ea643cc81efe1b0b47b292f956e933d1a9fedb35 (from https://www.piwheels.org/simple/kssdutils/) 2026-03-06T18:09:55,783 Given no hashes to check 1 links for project 'kssdutils': discarding no candidates 2026-03-06T18:09:55,862 Collecting kssdutils==1.2.1 2026-03-06T18:09:55,865 Created temporary directory: /tmp/pip-unpack-1qa775on 2026-03-06T18:09:55,873 Starting new HTTPS connection (1): files.pythonhosted.org:443 2026-03-06T18:09:55,948 https://files.pythonhosted.org:443 "GET /packages/bc/23/9cb4f9e681bcb9f0b76a4ba9ba04ee7196be39eb751f096b15c73846da91/kssdutils-1.2.1.tar.gz HTTP/1.1" 200 45835 2026-03-06T18:09:55,951 Downloading kssdutils-1.2.1.tar.gz (45 kB) 2026-03-06T18:09:56,133 Added kssdutils==1.2.1 from https://files.pythonhosted.org/packages/bc/23/9cb4f9e681bcb9f0b76a4ba9ba04ee7196be39eb751f096b15c73846da91/kssdutils-1.2.1.tar.gz#sha256=27ed3758b8ba203ede482c8d5982a96003c89d11f526436f6cce84056aa088d8 to build tracker '/tmp/pip-req-tracker-9ndjftp3' 2026-03-06T18:09:56,135 Running setup.py (path:/tmp/pip-wheel-shwx2ai1/kssdutils_50e1e222379741b8bf0668d0fa8b159d/setup.py) egg_info for package kssdutils 2026-03-06T18:09:56,137 Created temporary directory: /tmp/pip-pip-egg-info-i4ll3_k_ 2026-03-06T18:09:56,137 Running command python setup.py egg_info 2026-03-06T18:09:58,211 running egg_info 2026-03-06T18:09:58,285 creating /tmp/pip-pip-egg-info-i4ll3_k_/kssdutils.egg-info 2026-03-06T18:09:58,286 writing /tmp/pip-pip-egg-info-i4ll3_k_/kssdutils.egg-info/PKG-INFO 2026-03-06T18:09:58,294 writing dependency_links to /tmp/pip-pip-egg-info-i4ll3_k_/kssdutils.egg-info/dependency_links.txt 2026-03-06T18:09:58,299 writing top-level names to /tmp/pip-pip-egg-info-i4ll3_k_/kssdutils.egg-info/top_level.txt 2026-03-06T18:09:58,302 writing manifest file '/tmp/pip-pip-egg-info-i4ll3_k_/kssdutils.egg-info/SOURCES.txt' 2026-03-06T18:09:58,499 reading manifest file '/tmp/pip-pip-egg-info-i4ll3_k_/kssdutils.egg-info/SOURCES.txt' 2026-03-06T18:09:58,502 reading manifest template 'MANIFEST.in' 2026-03-06T18:09:58,523 writing manifest file '/tmp/pip-pip-egg-info-i4ll3_k_/kssdutils.egg-info/SOURCES.txt' 2026-03-06T18:09:58,680 Source in /tmp/pip-wheel-shwx2ai1/kssdutils_50e1e222379741b8bf0668d0fa8b159d has version 1.2.1, which satisfies requirement kssdutils==1.2.1 from https://files.pythonhosted.org/packages/bc/23/9cb4f9e681bcb9f0b76a4ba9ba04ee7196be39eb751f096b15c73846da91/kssdutils-1.2.1.tar.gz#sha256=27ed3758b8ba203ede482c8d5982a96003c89d11f526436f6cce84056aa088d8 2026-03-06T18:09:58,682 Removed kssdutils==1.2.1 from https://files.pythonhosted.org/packages/bc/23/9cb4f9e681bcb9f0b76a4ba9ba04ee7196be39eb751f096b15c73846da91/kssdutils-1.2.1.tar.gz#sha256=27ed3758b8ba203ede482c8d5982a96003c89d11f526436f6cce84056aa088d8 from build tracker '/tmp/pip-req-tracker-9ndjftp3' 2026-03-06T18:09:58,691 Created temporary directory: /tmp/pip-unpack-40_agoc9 2026-03-06T18:09:58,692 Building wheels for collected packages: kssdutils 2026-03-06T18:09:58,701 Created temporary directory: /tmp/pip-wheel-gezs4gnj 2026-03-06T18:09:58,702 Building wheel for kssdutils (setup.py): started 2026-03-06T18:09:58,759 Destination directory: /tmp/pip-wheel-gezs4gnj 2026-03-06T18:09:58,759 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-shwx2ai1/kssdutils_50e1e222379741b8bf0668d0fa8b159d/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-shwx2ai1/kssdutils_50e1e222379741b8bf0668d0fa8b159d/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-gezs4gnj 2026-03-06T18:10:00,743 running bdist_wheel 2026-03-06T18:10:01,002 running build 2026-03-06T18:10:01,003 running build_py 2026-03-06T18:10:01,070 creating build/lib.linux-armv7l-cpython-39 2026-03-06T18:10:01,073 copying kssdutils.py -> build/lib.linux-armv7l-cpython-39 2026-03-06T18:10:01,077 running egg_info 2026-03-06T18:10:01,140 writing kssdutils.egg-info/PKG-INFO 2026-03-06T18:10:01,146 writing dependency_links to kssdutils.egg-info/dependency_links.txt 2026-03-06T18:10:01,151 writing top-level names to kssdutils.egg-info/top_level.txt 2026-03-06T18:10:01,217 reading manifest file 'kssdutils.egg-info/SOURCES.txt' 2026-03-06T18:10:01,225 reading manifest template 'MANIFEST.in' 2026-03-06T18:10:01,244 writing manifest file 'kssdutils.egg-info/SOURCES.txt' 2026-03-06T18:10:01,248 running build_ext 2026-03-06T18:10:02,396 building 'kssdtool' extension 2026-03-06T18:10:02,399 creating build/temp.linux-armv7l-cpython-39 2026-03-06T18:10:02,403 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-eDAWto/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ikssdheaders -I/usr/include/python3.9 -c co2mco.c -o build/temp.linux-armv7l-cpython-39/co2mco.o -fopenmp 2026-03-06T18:10:02,796 co2mco.c: In function ‘combco2mco’: 2026-03-06T18:10:02,798 co2mco.c:38:22: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘4294967296’ to ‘0’ [-Woverflow] 2026-03-06T18:10:02,799 38 | size_t comp_sz = (1LLU << 4 * COMPONENT_SZ); 2026-03-06T18:10:02,799 | ^ 2026-03-06T18:10:02,804 co2mco.c: In function ‘cdb_kmerf2kmerdb’: 2026-03-06T18:10:02,805 co2mco.c:96:25: warning: left shift count >= width of type [-Wshift-count-overflow] 2026-03-06T18:10:02,806 96 | size_t comp_sz = (1 << 4 * COMPONENT_SZ); 2026-03-06T18:10:02,806 | ^~ 2026-03-06T18:10:02,808 co2mco.c:109:32: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 2026-03-06T18:10:02,809 109 | for (unsigned int i = 0; i < comp_num; i++) { 2026-03-06T18:10:02,809 | ^ 2026-03-06T18:10:02,816 co2mco.c: In function ‘co2unitllmco’: 2026-03-06T18:10:02,817 co2mco.c:184:31: warning: left shift count >= width of type [-Wshift-count-overflow] 2026-03-06T18:10:02,818 184 | unsigned int comp_sz = (1 << 4 * COMPONENT_SZ); 2026-03-06T18:10:02,818 | ^~ 2026-03-06T18:10:02,819 co2mco.c:191:32: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 2026-03-06T18:10:02,820 191 | for (unsigned int i = 0; i < bin_sz; i++) { 2026-03-06T18:10:02,820 | ^ 2026-03-06T18:10:02,823 co2mco.c: In function ‘llmco2arrmco’: 2026-03-06T18:10:02,824 co2mco.c:213:31: warning: left shift count >= width of type [-Wshift-count-overflow] 2026-03-06T18:10:02,824 213 | unsigned int comp_sz = (1 << 4 * COMPONENT_SZ); 2026-03-06T18:10:02,825 | ^~ 2026-03-06T18:10:02,827 co2mco.c: In function ‘write_unit_arrmco_file’: 2026-03-06T18:10:02,828 co2mco.c:251:31: warning: left shift count >= width of type [-Wshift-count-overflow] 2026-03-06T18:10:02,829 251 | unsigned int comp_sz = (1 << 4 * COMPONENT_SZ); 2026-03-06T18:10:02,829 | ^~ 2026-03-06T18:10:02,830 co2mco.c: In function ‘read_unit_arrmco_file’: 2026-03-06T18:10:02,830 co2mco.c:267:31: warning: left shift count >= width of type [-Wshift-count-overflow] 2026-03-06T18:10:02,831 267 | unsigned int comp_sz = (1 << 4 * COMPONENT_SZ); 2026-03-06T18:10:02,831 | ^~ 2026-03-06T18:10:02,831 co2mco.c: In function ‘free_unit_arrmco’: 2026-03-06T18:10:02,832 co2mco.c:282:31: warning: left shift count >= width of type [-Wshift-count-overflow] 2026-03-06T18:10:02,832 282 | unsigned int comp_sz = (1 << 4 * COMPONENT_SZ); 2026-03-06T18:10:02,833 | ^~ 2026-03-06T18:10:02,833 co2mco.c: In function ‘est_unitllmco_mem’: 2026-03-06T18:10:02,834 co2mco.c:292:32: warning: left shift count >= width of type [-Wshift-count-overflow] 2026-03-06T18:10:02,835 292 | unsigned int comp_sz = (1U << 4 * COMPONENT_SZ); 2026-03-06T18:10:02,836 | ^~ 2026-03-06T18:10:02,837 co2mco.c: In function ‘precise_est_unitllmco_mem’: 2026-03-06T18:10:02,837 co2mco.c:308:32: warning: left shift count >= width of type [-Wshift-count-overflow] 2026-03-06T18:10:02,838 308 | unsigned int comp_sz = (1U << 4 * COMPONENT_SZ); 2026-03-06T18:10:02,838 | ^~ 2026-03-06T18:10:04,032 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-eDAWto/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ikssdheaders -I/usr/include/python3.9 -c command_composite.c -o build/temp.linux-armv7l-cpython-39/command_composite.o -fopenmp 2026-03-06T18:10:04,759 command_composite.c: In function ‘get_species_abundance’: 2026-03-06T18:10:04,759 command_composite.c:32:34: warning: ‘%s’ directive argument is null [-Wformat-overflow=] 2026-03-06T18:10:04,760 32 | if (ref_dstat_fpath == NULL) fprintf(stderr, "cannot find %s under %s ", co_dstat, ref_dstat_fpath); 2026-03-06T18:10:04,761 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:04,761 command_composite.c:34:34: warning: ‘%s’ directive argument is null [-Wformat-overflow=] 2026-03-06T18:10:04,762 34 | if (qry_dstat_fpath == NULL) fprintf(stderr, "cannot find %s under %s ", co_dstat, qry_dstat_fpath); 2026-03-06T18:10:04,762 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:04,763 command_composite.c:64:37: warning: ‘.’ directive writing 1 byte into a region of size between 0 and 255 [-Wformat-overflow=] 2026-03-06T18:10:04,763 64 | sprintf(tmpfname, "%s/%s.%d", composite_opt->refdir, skch_prefix, c); 2026-03-06T18:10:04,763 | ^ 2026-03-06T18:10:04,764 command_composite.c:64:13: note: ‘sprintf’ output 4 or more bytes (assuming 259) into a destination of size 256 2026-03-06T18:10:04,765 64 | sprintf(tmpfname, "%s/%s.%d", composite_opt->refdir, skch_prefix, c); 2026-03-06T18:10:04,766 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:04,766 command_composite.c:70:37: warning: ‘.’ directive writing 1 byte into a region of size between 0 and 255 [-Wformat-overflow=] 2026-03-06T18:10:04,767 70 | sprintf(tmpfname, "%s/%s.%d", composite_opt->refdir, idx_prefix, c); 2026-03-06T18:10:04,767 | ^ 2026-03-06T18:10:04,768 command_composite.c:70:13: note: ‘sprintf’ output 4 or more bytes (assuming 259) into a destination of size 256 2026-03-06T18:10:04,768 70 | sprintf(tmpfname, "%s/%s.%d", composite_opt->refdir, idx_prefix, c); 2026-03-06T18:10:04,768 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:04,769 command_composite.c:76:37: warning: ‘.’ directive writing 1 byte into a region of size between 0 and 255 [-Wformat-overflow=] 2026-03-06T18:10:04,769 76 | sprintf(tmpfname, "%s/%s.%d", composite_opt->qrydir, skch_prefix, c); 2026-03-06T18:10:04,770 | ^ 2026-03-06T18:10:04,770 command_composite.c:76:13: note: ‘sprintf’ output 4 or more bytes (assuming 259) into a destination of size 256 2026-03-06T18:10:04,771 76 | sprintf(tmpfname, "%s/%s.%d", composite_opt->qrydir, skch_prefix, c); 2026-03-06T18:10:04,771 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:04,772 command_composite.c:82:37: warning: ‘.’ directive writing 1 byte into a region of size between 0 and 255 [-Wformat-overflow=] 2026-03-06T18:10:04,772 82 | sprintf(tmpfname, "%s/%s.%d", composite_opt->qrydir, idx_prefix, c); 2026-03-06T18:10:04,773 | ^ 2026-03-06T18:10:04,773 command_composite.c:82:13: note: ‘sprintf’ output 4 or more bytes (assuming 259) into a destination of size 256 2026-03-06T18:10:04,774 82 | sprintf(tmpfname, "%s/%s.%d", composite_opt->qrydir, idx_prefix, c); 2026-03-06T18:10:04,774 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:04,775 command_composite.c:88:37: warning: ‘.’ directive writing 1 byte into a region of size between 0 and 255 [-Wformat-overflow=] 2026-03-06T18:10:04,775 88 | sprintf(tmpfname, "%s/%s.%d.a", composite_opt->qrydir, skch_prefix, c); 2026-03-06T18:10:04,776 | ^ 2026-03-06T18:10:04,776 command_composite.c:88:13: note: ‘sprintf’ output 6 or more bytes (assuming 261) into a destination of size 256 2026-03-06T18:10:04,777 88 | sprintf(tmpfname, "%s/%s.%d.a", composite_opt->qrydir, skch_prefix, c); 2026-03-06T18:10:04,777 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:05,337 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-eDAWto/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ikssdheaders -I/usr/include/python3.9 -c command_dist.c -o build/temp.linux-armv7l-cpython-39/command_dist.o -fopenmp 2026-03-06T18:10:05,819 command_dist.c: In function ‘mco_cbd_co_dist’: 2026-03-06T18:10:05,821 command_dist.c:637:22: warning: left shift count >= width of type [-Wshift-count-overflow] 2026-03-06T18:10:05,821 637 | int comp_sz = (1 << 4 * COMPONENT_SZ); 2026-03-06T18:10:05,822 | ^~ 2026-03-06T18:10:05,828 command_dist.c:664:27: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 2026-03-06T18:10:05,829 664 | printf("disf_sz=%lu\trefnum=%d\tqrynum=%d\tnum_mapping_distf=%dbnum_infile=%d\t\t%lu\t%lu\tflag1:Ok\n", 2026-03-06T18:10:05,829 | ~~^ 2026-03-06T18:10:05,830 | | 2026-03-06T18:10:05,830 | long unsigned int 2026-03-06T18:10:05,831 | %u 2026-03-06T18:10:05,831 665 | disf_sz, mco_dstat_readin.infile_num, co_dstat_readin.infile_num, num_mapping_distf, bnum_infile, 2026-03-06T18:10:05,831 | ~~~~~~~ 2026-03-06T18:10:05,832 | | 2026-03-06T18:10:05,832 | size_t {aka unsigned int} 2026-03-06T18:10:05,833 command_dist.c:664:92: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 7 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 2026-03-06T18:10:05,833 664 | printf("disf_sz=%lu\trefnum=%d\tqrynum=%d\tnum_mapping_distf=%dbnum_infile=%d\t\t%lu\t%lu\tflag1:Ok\n", 2026-03-06T18:10:05,833 | ~~^ 2026-03-06T18:10:05,834 | | 2026-03-06T18:10:05,834 | long unsigned int 2026-03-06T18:10:05,835 | %u 2026-03-06T18:10:05,835 665 | disf_sz, mco_dstat_readin.infile_num, co_dstat_readin.infile_num, num_mapping_distf, bnum_infile, 2026-03-06T18:10:05,835 666 | maplength, (size_t) b * unitsz_distf_mapped); 2026-03-06T18:10:05,836 | ~~~~~~~~~ 2026-03-06T18:10:05,836 | | 2026-03-06T18:10:05,837 | size_t {aka unsigned int} 2026-03-06T18:10:05,837 command_dist.c:664:97: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 8 has type ‘unsigned int’ [-Wformat=] 2026-03-06T18:10:05,838 664 | printf("disf_sz=%lu\trefnum=%d\tqrynum=%d\tnum_mapping_distf=%dbnum_infile=%d\t\t%lu\t%lu\tflag1:Ok\n", 2026-03-06T18:10:05,838 | ~~^ 2026-03-06T18:10:05,839 | | 2026-03-06T18:10:05,839 | long unsigned int 2026-03-06T18:10:05,840 | %u 2026-03-06T18:10:05,840 665 | disf_sz, mco_dstat_readin.infile_num, co_dstat_readin.infile_num, num_mapping_distf, bnum_infile, 2026-03-06T18:10:05,840 666 | maplength, (size_t) b * unitsz_distf_mapped); 2026-03-06T18:10:05,841 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:05,841 | | 2026-03-06T18:10:05,842 | unsigned int 2026-03-06T18:10:05,842 command_dist.c:702:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 2026-03-06T18:10:05,843 702 | for (int n = 0; n < fco_pos[k + 1] - fco_pos[k]; n++) { 2026-03-06T18:10:05,843 | ^ 2026-03-06T18:10:05,849 command_dist.c: In function ‘mco_cbdco_nobin_dist’: 2026-03-06T18:10:05,850 command_dist.c:791:25: warning: left shift count >= width of type [-Wshift-count-overflow] 2026-03-06T18:10:05,850 791 | size_t comp_sz = (1 << 4 * COMPONENT_SZ); 2026-03-06T18:10:05,851 | ^~ 2026-03-06T18:10:05,861 command_dist.c:850:27: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 2026-03-06T18:10:05,861 850 | printf("disf_sz=%lu\trefnum=%d\tqrynum=%d\tnum_mapping_distf=%d\tbatch_qrynum=%d\t%lu\t%lu\n", disf_sz, 2026-03-06T18:10:05,862 | ~~^ ~~~~~~~ 2026-03-06T18:10:05,862 | | | 2026-03-06T18:10:05,862 | long unsigned int size_t {aka unsigned int} 2026-03-06T18:10:05,863 | %u 2026-03-06T18:10:05,864 command_dist.c:850:93: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 7 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 2026-03-06T18:10:05,865 850 | printf("disf_sz=%lu\trefnum=%d\tqrynum=%d\tnum_mapping_distf=%d\tbatch_qrynum=%d\t%lu\t%lu\n", disf_sz, 2026-03-06T18:10:05,865 | ~~^ 2026-03-06T18:10:05,865 | | 2026-03-06T18:10:05,866 | long unsigned int 2026-03-06T18:10:05,866 | %u 2026-03-06T18:10:05,867 851 | mco_dstat_readin.infile_num, co_dstat_readin.infile_num, num_mapping_distf, bnum_infile, maplength, 2026-03-06T18:10:05,867 | ~~~~~~~~~ 2026-03-06T18:10:05,867 | | 2026-03-06T18:10:05,868 | size_t {aka unsigned int} 2026-03-06T18:10:05,868 command_dist.c:850:98: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 8 has type ‘unsigned int’ [-Wformat=] 2026-03-06T18:10:05,869 850 | printf("disf_sz=%lu\trefnum=%d\tqrynum=%d\tnum_mapping_distf=%d\tbatch_qrynum=%d\t%lu\t%lu\n", disf_sz, 2026-03-06T18:10:05,869 | ~~^ 2026-03-06T18:10:05,870 | | 2026-03-06T18:10:05,870 | long unsigned int 2026-03-06T18:10:05,870 | %u 2026-03-06T18:10:05,871 851 | mco_dstat_readin.infile_num, co_dstat_readin.infile_num, num_mapping_distf, bnum_infile, maplength, 2026-03-06T18:10:05,871 852 | (size_t) b * unitsz_distf_mapped); 2026-03-06T18:10:05,872 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:05,872 | | 2026-03-06T18:10:05,872 | unsigned int 2026-03-06T18:10:05,873 command_dist.c:797:13: warning: unused variable ‘fco_pos’ [-Wunused-variable] 2026-03-06T18:10:05,873 797 | size_t *fco_pos = malloc(sizeof(size_t) * (co_dstat_readin.infile_num + 1)); 2026-03-06T18:10:05,874 | ^~~~~~~ 2026-03-06T18:10:05,874 command_dist.c:796:17: warning: unused variable ‘cbd_fcode_stat’ [-Wunused-variable] 2026-03-06T18:10:05,875 796 | struct stat cbd_fcode_stat; 2026-03-06T18:10:05,875 | ^~~~~~~~~~~~~~ 2026-03-06T18:10:05,875 command_dist.c:795:31: warning: unused variable ‘cbd_fcode_comp_index_fp’ [-Wunused-variable] 2026-03-06T18:10:05,876 795 | FILE *cbd_fcode_comp_fp, *cbd_fcode_comp_index_fp; 2026-03-06T18:10:05,876 | ^~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:05,877 command_dist.c:795:11: warning: unused variable ‘cbd_fcode_comp_fp’ [-Wunused-variable] 2026-03-06T18:10:05,877 795 | FILE *cbd_fcode_comp_fp, *cbd_fcode_comp_index_fp; 2026-03-06T18:10:05,878 | ^~~~~~~~~~~~~~~~~ 2026-03-06T18:10:05,884 command_dist.c: In function ‘mco_cbd_koc_compatible_dist’: 2026-03-06T18:10:05,885 command_dist.c:957:25: warning: left shift count >= width of type [-Wshift-count-overflow] 2026-03-06T18:10:05,885 957 | size_t comp_sz = (1 << 4 * COMPONENT_SZ); 2026-03-06T18:10:05,886 | ^~ 2026-03-06T18:10:05,895 command_dist.c:1005:27: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 2026-03-06T18:10:05,896 1005 | printf("disf_sz=%lu\trefnum=%d\tqrynum=%d\tnum_mapping_distf=%dbnum_infile=%d\t\t%lu\t%lu\tflag1:Ok\n", 2026-03-06T18:10:05,896 | ~~^ 2026-03-06T18:10:05,897 | | 2026-03-06T18:10:05,897 | long unsigned int 2026-03-06T18:10:05,897 | %u 2026-03-06T18:10:05,898 1006 | disf_sz, mco_dstat_readin.infile_num, co_dstat_readin.infile_num, num_mapping_distf, bnum_infile, 2026-03-06T18:10:05,898 | ~~~~~~~ 2026-03-06T18:10:05,898 | | 2026-03-06T18:10:05,899 | size_t {aka unsigned int} 2026-03-06T18:10:05,899 command_dist.c:1005:92: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 7 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 2026-03-06T18:10:05,900 1005 | printf("disf_sz=%lu\trefnum=%d\tqrynum=%d\tnum_mapping_distf=%dbnum_infile=%d\t\t%lu\t%lu\tflag1:Ok\n", 2026-03-06T18:10:05,900 | ~~^ 2026-03-06T18:10:05,901 | | 2026-03-06T18:10:05,901 | long unsigned int 2026-03-06T18:10:05,901 | %u 2026-03-06T18:10:05,902 1006 | disf_sz, mco_dstat_readin.infile_num, co_dstat_readin.infile_num, num_mapping_distf, bnum_infile, 2026-03-06T18:10:05,902 1007 | maplength, (size_t) b * unitsz_distf_mapped); 2026-03-06T18:10:05,902 | ~~~~~~~~~ 2026-03-06T18:10:05,903 | | 2026-03-06T18:10:05,903 | size_t {aka unsigned int} 2026-03-06T18:10:05,904 command_dist.c:1005:97: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 8 has type ‘unsigned int’ [-Wformat=] 2026-03-06T18:10:05,904 1005 | printf("disf_sz=%lu\trefnum=%d\tqrynum=%d\tnum_mapping_distf=%dbnum_infile=%d\t\t%lu\t%lu\tflag1:Ok\n", 2026-03-06T18:10:05,905 | ~~^ 2026-03-06T18:10:05,905 | | 2026-03-06T18:10:05,906 | long unsigned int 2026-03-06T18:10:05,906 | %u 2026-03-06T18:10:05,906 1006 | disf_sz, mco_dstat_readin.infile_num, co_dstat_readin.infile_num, num_mapping_distf, bnum_infile, 2026-03-06T18:10:05,907 1007 | maplength, (size_t) b * unitsz_distf_mapped); 2026-03-06T18:10:05,907 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:05,908 | | 2026-03-06T18:10:05,908 | unsigned int 2026-03-06T18:10:05,908 command_dist.c:1021:27: warning: comparison of integer expressions of different signedness: ‘__off_t’ {aka ‘long int’} and ‘unsigned int’ [-Wsign-compare] 2026-03-06T18:10:05,909 1021 | if (s.st_size > sizeof(gidobj_t) * MCOMM_SZ) mco_mem = (gidobj_t *) realloc(mco_mem, s.st_size); 2026-03-06T18:10:05,909 | ^ 2026-03-06T18:10:05,915 command_dist.c: In function ‘mco_co_dist_core’: 2026-03-06T18:10:05,916 command_dist.c:1103:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘gidobj_t’ {aka ‘unsigned int’} [-Wsign-compare] 2026-03-06T18:10:05,917 1103 | for (int k = 1; k < unit_arrmco[ind][0] + 1; k++) { 2026-03-06T18:10:05,918 | ^ 2026-03-06T18:10:05,931 command_dist.c: In function ‘koc_dist_print_nobin’: 2026-03-06T18:10:05,932 command_dist.c:1226:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 2026-03-06T18:10:05,933 1226 | for (int rid = 0; rid < ref_num; rid++) 2026-03-06T18:10:05,933 | ^ 2026-03-06T18:10:05,936 command_dist.c:1232:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 2026-03-06T18:10:05,937 1232 | for (int rid = 0; rid < ref_num; rid++) { 2026-03-06T18:10:05,937 | ^ 2026-03-06T18:10:05,949 command_dist.c: In function ‘dist_print_nobin’: 2026-03-06T18:10:05,950 command_dist.c:1322:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 2026-03-06T18:10:05,951 1322 | if ((N_max > NREF) || (N_max > ref_num)) { 2026-03-06T18:10:05,951 | ^ 2026-03-06T18:10:05,955 command_dist.c:1343:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 2026-03-06T18:10:05,956 1343 | for (int rid = 0; rid < ref_num; rid++) { 2026-03-06T18:10:05,956 | ^ 2026-03-06T18:10:05,959 command_dist.c:1367:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 2026-03-06T18:10:05,959 1367 | for (int rid = 0; rid < ref_num; rid++) 2026-03-06T18:10:05,960 | ^ 2026-03-06T18:10:05,961 command_dist.c:1369:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 2026-03-06T18:10:05,962 1369 | for (int rid = 0; rid < ref_num; rid++) 2026-03-06T18:10:05,962 | ^ 2026-03-06T18:10:06,559 command_dist.c: In function ‘run_stageI._omp_fn.1’: 2026-03-06T18:10:06,559 command_dist.c:390:21: warning: ‘com_abund_fp’ may be used uninitialized in this function [-Wmaybe-uninitialized] 2026-03-06T18:10:06,560 390 | fwrite(tmp_mem, sizeof(unsigned short) * tmpkmerct, 1, com_abund_fp); 2026-03-06T18:10:06,560 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:06,561 command_dist.c:362:40: note: ‘com_abund_fp’ was declared here 2026-03-06T18:10:06,561 362 | FILE *com_cofp, *indexfp, *com_abund_fp; 2026-03-06T18:10:06,562 | ^~~~~~~~~~~~ 2026-03-06T18:10:08,316 command_dist.c: In function ‘get_dim_shuffle’: 2026-03-06T18:10:08,317 command_dist.c:267:36: warning: ‘%s’ directive writing up to 264 bytes into a region of size 256 [-Wformat-overflow=] 2026-03-06T18:10:08,317 267 | sprintf(shuf_infile_name, "%s.shuf", shuf_infile_name_prefix); 2026-03-06T18:10:08,318 | ^~ ~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:08,318 command_dist.c:267:9: note: ‘sprintf’ output between 6 and 270 bytes into a destination of size 256 2026-03-06T18:10:08,319 267 | sprintf(shuf_infile_name, "%s.shuf", shuf_infile_name_prefix); 2026-03-06T18:10:08,319 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:10,219 command_dist.c: In function ‘mco_cbd_co_dist’: 2026-03-06T18:10:10,220 command_dist.c:583:37: warning: ‘%s’ directive writing 13 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2026-03-06T18:10:10,221 583 | sprintf(refmco_dstat_fpath, "%s/%s", refmco_dname, mco_dstat); 2026-03-06T18:10:10,221 | ^~ ~~~~~~~~~ 2026-03-06T18:10:10,222 command_dist.c:583:5: note: ‘sprintf’ output between 15 and 270 bytes into a destination of size 256 2026-03-06T18:10:10,222 583 | sprintf(refmco_dstat_fpath, "%s/%s", refmco_dname, mco_dstat); 2026-03-06T18:10:10,223 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:10,223 command_dist.c:612:25: warning: ‘/sharedk_ct.dat’ directive writing 15 bytes into a region of size between 1 and 256 [-Wformat-overflow=] 2026-03-06T18:10:10,224 612 | sprintf(onedist, "%s/sharedk_ct.dat", distout_dir); 2026-03-06T18:10:10,224 | ^~~~~~~~~~~~~~~ 2026-03-06T18:10:10,225 command_dist.c:612:5: note: ‘sprintf’ output between 16 and 271 bytes into a destination of size 256 2026-03-06T18:10:10,225 612 | sprintf(onedist, "%s/sharedk_ct.dat", distout_dir); 2026-03-06T18:10:10,226 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:10,227 command_dist.c:668:41: warning: ‘/mco.index.’ directive writing 11 bytes into a region of size between 1 and 256 [-Wformat-overflow=] 2026-03-06T18:10:10,227 668 | sprintf(mco_index_fcode, "%s/mco.index.%d", refmco_dname, j); 2026-03-06T18:10:10,228 | ^~~~~~~~~~~ 2026-03-06T18:10:10,228 command_dist.c:668:13: note: ‘sprintf’ output between 13 and 278 bytes into a destination of size 256 2026-03-06T18:10:10,228 668 | sprintf(mco_index_fcode, "%s/mco.index.%d", refmco_dname, j); 2026-03-06T18:10:10,229 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:10,229 command_dist.c:669:35: warning: ‘/mco.’ directive writing 5 bytes into a region of size between 1 and 256 [-Wformat-overflow=] 2026-03-06T18:10:10,230 669 | sprintf(mco_fcode, "%s/mco.%d", refmco_dname, j); 2026-03-06T18:10:10,230 | ^~~~~ 2026-03-06T18:10:10,231 command_dist.c:669:13: note: ‘sprintf’ output between 7 and 272 bytes into a destination of size 256 2026-03-06T18:10:10,231 669 | sprintf(mco_fcode, "%s/mco.%d", refmco_dname, j); 2026-03-06T18:10:10,231 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:10,715 command_dist.c: In function ‘mco_cbdco_nobin_dist’: 2026-03-06T18:10:10,717 command_dist.c:750:37: warning: ‘%s’ directive writing 13 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2026-03-06T18:10:10,718 750 | sprintf(refmco_dstat_fpath, "%s/%s", refmco_dname, mco_dstat); 2026-03-06T18:10:10,718 | ^~ ~~~~~~~~~ 2026-03-06T18:10:10,718 command_dist.c:750:5: note: ‘sprintf’ output between 15 and 270 bytes into a destination of size 256 2026-03-06T18:10:10,719 750 | sprintf(refmco_dstat_fpath, "%s/%s", refmco_dname, mco_dstat); 2026-03-06T18:10:10,719 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:10,720 command_dist.c:777:25: warning: ‘/sharedk_ct.dat’ directive writing 15 bytes into a region of size between 1 and 256 [-Wformat-overflow=] 2026-03-06T18:10:10,721 777 | sprintf(onedist, "%s/sharedk_ct.dat", distout_dir); 2026-03-06T18:10:10,721 | ^~~~~~~~~~~~~~~ 2026-03-06T18:10:10,721 command_dist.c:777:5: note: ‘sprintf’ output between 16 and 271 bytes into a destination of size 256 2026-03-06T18:10:10,722 777 | sprintf(onedist, "%s/sharedk_ct.dat", distout_dir); 2026-03-06T18:10:10,722 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:10,723 command_dist.c:810:23: warning: ‘/distance.out’ directive writing 13 bytes into a region of size between 1 and 256 [-Wformat-overflow=] 2026-03-06T18:10:10,723 810 | sprintf(distf, "%s/distance.out", distout_dir); 2026-03-06T18:10:10,724 | ^~~~~~~~~~~~~ 2026-03-06T18:10:10,724 command_dist.c:810:5: note: ‘sprintf’ output between 14 and 269 bytes into a destination of size 256 2026-03-06T18:10:10,725 810 | sprintf(distf, "%s/distance.out", distout_dir); 2026-03-06T18:10:10,725 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:10,727 command_dist.c:836:39: warning: ‘.’ directive writing 1 byte into a region of size between 0 and 255 [-Wformat-overflow=] 2026-03-06T18:10:10,727 836 | sprintf(mco_index_fcode, "%s/%s.%d", refmco_dname, mco_idx_prefix, j); 2026-03-06T18:10:10,728 | ^ 2026-03-06T18:10:10,728 command_dist.c:836:33: note: directive argument in the range [0, 536870912] 2026-03-06T18:10:10,729 836 | sprintf(mco_index_fcode, "%s/%s.%d", refmco_dname, mco_idx_prefix, j); 2026-03-06T18:10:10,729 | ^~~~~~~~~~ 2026-03-06T18:10:10,730 command_dist.c:836:8: note: ‘sprintf’ output 4 or more bytes (assuming 267) into a destination of size 256 2026-03-06T18:10:10,730 836 | sprintf(mco_index_fcode, "%s/%s.%d", refmco_dname, mco_idx_prefix, j); 2026-03-06T18:10:10,731 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:10,731 command_dist.c:838:34: warning: ‘.’ directive writing 1 byte into a region of size between 0 and 255 [-Wformat-overflow=] 2026-03-06T18:10:10,732 838 | sprintf(mco_fcode, "%s/%s.%d", refmco_dname, mco_gids_prefix, j); 2026-03-06T18:10:10,732 | ^ 2026-03-06T18:10:10,733 command_dist.c:838:28: note: directive argument in the range [0, 536870912] 2026-03-06T18:10:10,733 838 | sprintf(mco_fcode, "%s/%s.%d", refmco_dname, mco_gids_prefix, j); 2026-03-06T18:10:10,734 | ^~~~~~~~~~ 2026-03-06T18:10:10,734 command_dist.c:838:9: note: ‘sprintf’ output 4 or more bytes (assuming 267) into a destination of size 256 2026-03-06T18:10:10,735 838 | sprintf(mco_fcode, "%s/%s.%d", refmco_dname, mco_gids_prefix, j); 2026-03-06T18:10:10,735 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:11,288 command_dist.c: In function ‘mco_cbd_koc_compatible_dist’: 2026-03-06T18:10:11,291 command_dist.c:914:37: warning: ‘%s’ directive writing 13 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2026-03-06T18:10:11,291 914 | sprintf(refmco_dstat_fpath, "%s/%s", refmco_dname, mco_dstat); 2026-03-06T18:10:11,291 | ^~ ~~~~~~~~~ 2026-03-06T18:10:11,292 command_dist.c:914:5: note: ‘sprintf’ output between 15 and 270 bytes into a destination of size 256 2026-03-06T18:10:11,293 914 | sprintf(refmco_dstat_fpath, "%s/%s", refmco_dname, mco_dstat); 2026-03-06T18:10:11,293 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:11,294 command_dist.c:943:25: warning: ‘/sharedk_ct.dat’ directive writing 15 bytes into a region of size between 1 and 256 [-Wformat-overflow=] 2026-03-06T18:10:11,295 943 | sprintf(onedist, "%s/sharedk_ct.dat", distout_dir); 2026-03-06T18:10:11,295 | ^~~~~~~~~~~~~~~ 2026-03-06T18:10:11,296 command_dist.c:943:5: note: ‘sprintf’ output between 16 and 271 bytes into a destination of size 256 2026-03-06T18:10:11,296 943 | sprintf(onedist, "%s/sharedk_ct.dat", distout_dir); 2026-03-06T18:10:11,297 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:11,298 command_dist.c:977:23: warning: ‘/distance.out’ directive writing 13 bytes into a region of size between 1 and 256 [-Wformat-overflow=] 2026-03-06T18:10:11,298 977 | sprintf(distf, "%s/distance.out", distout_dir); 2026-03-06T18:10:11,299 | ^~~~~~~~~~~~~ 2026-03-06T18:10:11,300 command_dist.c:977:5: note: ‘sprintf’ output between 14 and 269 bytes into a destination of size 256 2026-03-06T18:10:11,300 977 | sprintf(distf, "%s/distance.out", distout_dir); 2026-03-06T18:10:11,301 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:11,303 command_dist.c:1009:41: warning: ‘/mco.index.’ directive writing 11 bytes into a region of size between 1 and 256 [-Wformat-overflow=] 2026-03-06T18:10:11,303 1009 | sprintf(mco_index_fcode, "%s/mco.index.%d", refmco_dname, j); 2026-03-06T18:10:11,303 | ^~~~~~~~~~~ 2026-03-06T18:10:11,304 command_dist.c:1009:13: note: ‘sprintf’ output between 13 and 278 bytes into a destination of size 256 2026-03-06T18:10:11,305 1009 | sprintf(mco_index_fcode, "%s/mco.index.%d", refmco_dname, j); 2026-03-06T18:10:11,305 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:11,306 command_dist.c:1010:35: warning: ‘/mco.’ directive writing 5 bytes into a region of size between 1 and 256 [-Wformat-overflow=] 2026-03-06T18:10:11,306 1010 | sprintf(mco_fcode, "%s/mco.%d", refmco_dname, j); 2026-03-06T18:10:11,307 | ^~~~~ 2026-03-06T18:10:11,308 command_dist.c:1010:13: note: ‘sprintf’ output between 7 and 272 bytes into a destination of size 256 2026-03-06T18:10:11,308 1010 | sprintf(mco_fcode, "%s/mco.%d", refmco_dname, j); 2026-03-06T18:10:11,309 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:11,888 command_dist.c: In function ‘combine_queries’: 2026-03-06T18:10:11,891 command_dist.c:1479:41: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 2026-03-06T18:10:11,891 1479 | sprintf(one_kmerct_list_name, "%s/%s", co_dir, kmerct_list_fname); 2026-03-06T18:10:11,892 | ^ 2026-03-06T18:10:11,893 command_dist.c:1479:5: note: ‘sprintf’ output 2 or more bytes (assuming 257) into a destination of size 256 2026-03-06T18:10:11,894 1479 | sprintf(one_kmerct_list_name, "%s/%s", co_dir, kmerct_list_fname); 2026-03-06T18:10:11,894 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:11,896 command_dist.c:1486:40: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 2026-03-06T18:10:11,896 1486 | sprintf(one_infilename_name, "%s/%s", co_dir, fname_fname); 2026-03-06T18:10:11,897 | ^ 2026-03-06T18:10:11,898 command_dist.c:1486:5: note: ‘sprintf’ output 2 or more bytes (assuming 257) into a destination of size 256 2026-03-06T18:10:11,899 1486 | sprintf(one_infilename_name, "%s/%s", co_dir, fname_fname); 2026-03-06T18:10:11,899 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:11,904 command_dist.c:1590:32: warning: ‘%s’ directive writing 12 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2026-03-06T18:10:11,904 1590 | sprintf(one_stat_name, "%s/%s", co_dir, co_dstat); 2026-03-06T18:10:11,904 | ^~ ~~~~~~~~ 2026-03-06T18:10:11,906 command_dist.c:1590:5: note: ‘sprintf’ output between 14 and 269 bytes into a destination of size 256 2026-03-06T18:10:11,907 1590 | sprintf(one_stat_name, "%s/%s", co_dir, co_dstat); 2026-03-06T18:10:11,907 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:13,117 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-eDAWto/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ikssdheaders -I/usr/include/python3.9 -c command_dist_wrapper.c -o build/temp.linux-armv7l-cpython-39/command_dist_wrapper.o -fopenmp 2026-03-06T18:10:13,527 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-eDAWto/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ikssdheaders -I/usr/include/python3.9 -c command_set.c -o build/temp.linux-armv7l-cpython-39/command_set.o -fopenmp 2026-03-06T18:10:13,884 command_set.c: In function ‘sketch_union’: 2026-03-06T18:10:13,885 command_set.c:77:22: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘4294967296’ to ‘0’ [-Woverflow] 2026-03-06T18:10:13,885 77 | size_t comp_sz = (1LLU << 4*COMPONENT_SZ); 2026-03-06T18:10:13,886 | ^ 2026-03-06T18:10:13,890 command_set.c: In function ‘sketch_operate’: 2026-03-06T18:10:13,890 command_set.c:148:22: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘4294967296’ to ‘0’ [-Woverflow] 2026-03-06T18:10:13,891 148 | size_t comp_sz = (1LLU << 4*COMPONENT_SZ); 2026-03-06T18:10:13,891 | ^ 2026-03-06T18:10:13,894 command_set.c:178:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 2026-03-06T18:10:13,894 178 | for(int n = 0; n < fco_pos[i+1] - fco_pos[i]; n++){ 2026-03-06T18:10:13,895 | ^ 2026-03-06T18:10:13,899 command_set.c: In function ‘uniq_sketch_union’: 2026-03-06T18:10:13,899 command_set.c:240:22: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘4294967296’ to ‘0’ [-Woverflow] 2026-03-06T18:10:13,900 240 | size_t comp_sz = (1LLU << 4*COMPONENT_SZ); 2026-03-06T18:10:13,900 | ^ 2026-03-06T18:10:13,918 command_set.c: In function ‘combin_subset_pans’: 2026-03-06T18:10:13,919 command_set.c:457:10: warning: passing argument 1 of ‘free’ discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 2026-03-06T18:10:13,920 457 | free(co_dstat_fpath); 2026-03-06T18:10:13,920 | ^~~~~~~~~~~~~~ 2026-03-06T18:10:13,921 In file included from kssdheaders/global_basic.h:159, 2026-03-06T18:10:13,921 from command_set.c:15: 2026-03-06T18:10:13,921 /usr/include/stdlib.h:565:25: note: expected ‘void *’ but argument is of type ‘const char *’ 2026-03-06T18:10:13,922 565 | extern void free (void *__ptr) __THROW; 2026-03-06T18:10:13,922 | ~~~~~~^~~~~ 2026-03-06T18:10:13,923 command_set.c:465:22: warning: conversion from ‘long long unsigned int’ to ‘size_t’ {aka ‘unsigned int’} changes value from ‘4294967296’ to ‘0’ [-Woverflow] 2026-03-06T18:10:13,923 465 | size_t comp_sz = (1LLU << 4*COMPONENT_SZ); 2026-03-06T18:10:13,924 | ^ 2026-03-06T18:10:13,931 command_set.c: In function ‘grouping_genomes’: 2026-03-06T18:10:13,932 command_set.c:562:10: warning: passing argument 1 of ‘free’ discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 2026-03-06T18:10:13,933 562 | free(co_dstat_fpath); 2026-03-06T18:10:13,933 | ^~~~~~~~~~~~~~ 2026-03-06T18:10:13,934 In file included from kssdheaders/global_basic.h:159, 2026-03-06T18:10:13,934 from command_set.c:15: 2026-03-06T18:10:13,935 /usr/include/stdlib.h:565:25: note: expected ‘void *’ but argument is of type ‘const char *’ 2026-03-06T18:10:13,935 565 | extern void free (void *__ptr) __THROW; 2026-03-06T18:10:13,936 | ~~~~~~^~~~~ 2026-03-06T18:10:14,182 command_set.c: In function ‘sketch_union’: 2026-03-06T18:10:14,182 command_set.c:71:27: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 2026-03-06T18:10:14,183 71 | sprintf(outpath,"%s/%s",set_opt.outdir,co_dstat); 2026-03-06T18:10:14,183 | ^ 2026-03-06T18:10:14,184 command_set.c:71:5: note: ‘sprintf’ output 2 or more bytes (assuming 257) into a destination of size 256 2026-03-06T18:10:14,184 71 | sprintf(outpath,"%s/%s",set_opt.outdir,co_dstat); 2026-03-06T18:10:14,185 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:14,185 command_set.c:82:29: warning: ‘%s’ directive writing 6 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2026-03-06T18:10:14,186 82 | sprintf(outpath,"%s/%s.%d",set_opt.insketchpath,skch_prefix,i); 2026-03-06T18:10:14,186 | ^~ ~~~~~~~~~~~ 2026-03-06T18:10:14,187 command_set.c:82:9: note: ‘sprintf’ output between 10 and 275 bytes into a destination of size 256 2026-03-06T18:10:14,187 82 | sprintf(outpath,"%s/%s.%d",set_opt.insketchpath,skch_prefix,i); 2026-03-06T18:10:14,188 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:14,188 command_set.c:92:29: warning: ‘%s’ directive writing 3 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2026-03-06T18:10:14,189 92 | sprintf(outpath,"%s/%s.%d",set_opt.outdir,pan_prefix,i); 2026-03-06T18:10:14,189 | ^~ ~~~~~~~~~~ 2026-03-06T18:10:14,190 command_set.c:92:9: note: ‘sprintf’ output between 7 and 272 bytes into a destination of size 256 2026-03-06T18:10:14,190 92 | sprintf(outpath,"%s/%s.%d",set_opt.outdir,pan_prefix,i); 2026-03-06T18:10:14,191 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:14,420 command_set.c: In function ‘sketch_operate’: 2026-03-06T18:10:14,421 command_set.c:153:29: warning: ‘%s’ directive writing 3 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2026-03-06T18:10:14,421 153 | sprintf(tmppath,"%s/%s.%d",set_opt.pansketchpath, pan_prefix, c); 2026-03-06T18:10:14,421 | ^~ ~~~~~~~~~~ 2026-03-06T18:10:14,422 command_set.c:153:9: note: ‘sprintf’ output between 7 and 272 bytes into a destination of size 256 2026-03-06T18:10:14,422 153 | sprintf(tmppath,"%s/%s.%d",set_opt.pansketchpath, pan_prefix, c); 2026-03-06T18:10:14,423 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:14,423 command_set.c:155:33: warning: ‘%s’ directive writing 8 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2026-03-06T18:10:14,424 155 | sprintf(tmppath,"%s/%s.%d",set_opt.pansketchpath, uniq_pan_prefix, c); 2026-03-06T18:10:14,424 | ^~ ~~~~~~~~~~~~~~~ 2026-03-06T18:10:14,425 command_set.c:155:13: note: ‘sprintf’ output between 12 and 277 bytes into a destination of size 256 2026-03-06T18:10:14,425 155 | sprintf(tmppath,"%s/%s.%d",set_opt.pansketchpath, uniq_pan_prefix, c); 2026-03-06T18:10:14,426 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:14,426 command_set.c:165:29: warning: ‘%s’ directive writing 6 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2026-03-06T18:10:14,426 165 | sprintf(tmppath,"%s/%s.index.%d",set_opt.insketchpath,skch_prefix, c); 2026-03-06T18:10:14,427 | ^~ ~~~~~~~~~~~ 2026-03-06T18:10:14,427 command_set.c:165:9: note: ‘sprintf’ output between 16 and 281 bytes into a destination of size 256 2026-03-06T18:10:14,428 165 | sprintf(tmppath,"%s/%s.index.%d",set_opt.insketchpath,skch_prefix, c); 2026-03-06T18:10:14,428 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:14,429 command_set.c:169:29: warning: ‘%s’ directive writing 6 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2026-03-06T18:10:14,429 169 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,skch_prefix, c); 2026-03-06T18:10:14,429 | ^~ ~~~~~~~~~~~ 2026-03-06T18:10:14,430 command_set.c:169:9: note: ‘sprintf’ output between 10 and 275 bytes into a destination of size 256 2026-03-06T18:10:14,430 169 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,skch_prefix, c); 2026-03-06T18:10:14,431 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:14,431 command_set.c:174:29: warning: ‘%s’ directive writing 6 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2026-03-06T18:10:14,432 174 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix, c); 2026-03-06T18:10:14,432 | ^~ ~~~~~~~~~~~ 2026-03-06T18:10:14,433 command_set.c:174:9: note: ‘sprintf’ output between 10 and 275 bytes into a destination of size 256 2026-03-06T18:10:14,433 174 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix, c); 2026-03-06T18:10:14,433 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:14,434 command_set.c:187:29: warning: ‘%s’ directive writing 6 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2026-03-06T18:10:14,434 187 | sprintf(tmppath,"%s/%s.index.%d",set_opt.outdir,skch_prefix, c); 2026-03-06T18:10:14,435 | ^~ ~~~~~~~~~~~ 2026-03-06T18:10:14,435 command_set.c:187:9: note: ‘sprintf’ output between 16 and 281 bytes into a destination of size 256 2026-03-06T18:10:14,436 187 | sprintf(tmppath,"%s/%s.index.%d",set_opt.outdir,skch_prefix, c); 2026-03-06T18:10:14,436 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:14,437 command_set.c:192:27: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 2026-03-06T18:10:14,437 192 | sprintf(tmppath,"%s/%s",set_opt.outdir,co_dstat); 2026-03-06T18:10:14,438 | ^ 2026-03-06T18:10:14,438 command_set.c:192:5: note: ‘sprintf’ output 2 or more bytes (assuming 257) into a destination of size 256 2026-03-06T18:10:14,439 192 | sprintf(tmppath,"%s/%s",set_opt.outdir,co_dstat); 2026-03-06T18:10:14,439 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:14,772 command_set.c: In function ‘uniq_sketch_union’: 2026-03-06T18:10:14,773 command_set.c:234:27: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 2026-03-06T18:10:14,774 234 | sprintf(outpath,"%s/%s",set_opt.outdir,co_dstat); 2026-03-06T18:10:14,774 | ^ 2026-03-06T18:10:14,774 command_set.c:234:5: note: ‘sprintf’ output 2 or more bytes (assuming 257) into a destination of size 256 2026-03-06T18:10:14,775 234 | sprintf(outpath,"%s/%s",set_opt.outdir,co_dstat); 2026-03-06T18:10:14,775 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:14,776 command_set.c:247:29: warning: ‘%s’ directive writing 6 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2026-03-06T18:10:14,776 247 | sprintf(outpath,"%s/%s.%d",set_opt.insketchpath,skch_prefix,i); 2026-03-06T18:10:14,777 | ^~ ~~~~~~~~~~~ 2026-03-06T18:10:14,777 command_set.c:247:9: note: ‘sprintf’ output between 10 and 275 bytes into a destination of size 256 2026-03-06T18:10:14,778 247 | sprintf(outpath,"%s/%s.%d",set_opt.insketchpath,skch_prefix,i); 2026-03-06T18:10:14,778 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:14,779 command_set.c:259:29: warning: ‘%s’ directive writing 8 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2026-03-06T18:10:14,779 259 | sprintf(outpath,"%s/%s.%d",set_opt.outdir,uniq_pan_prefix,i); 2026-03-06T18:10:14,779 | ^~ ~~~~~~~~~~~~~~~ 2026-03-06T18:10:14,780 command_set.c:259:9: note: ‘sprintf’ output between 12 and 277 bytes into a destination of size 256 2026-03-06T18:10:14,780 259 | sprintf(outpath,"%s/%s.%d",set_opt.outdir,uniq_pan_prefix,i); 2026-03-06T18:10:14,781 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:15,030 command_set.c: In function ‘combin_pans’: 2026-03-06T18:10:15,031 command_set.c:297:29: warning: ‘%s’ directive writing 6 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2026-03-06T18:10:15,032 297 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix,c); 2026-03-06T18:10:15,032 | ^~ ~~~~~~~~~~~ 2026-03-06T18:10:15,032 command_set.c:297:25: note: directive argument in the range [0, 1073741823] 2026-03-06T18:10:15,033 297 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix,c); 2026-03-06T18:10:15,033 | ^~~~~~~~~~ 2026-03-06T18:10:15,034 command_set.c:297:9: note: ‘sprintf’ output between 10 and 274 bytes into a destination of size 256 2026-03-06T18:10:15,034 297 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix,c); 2026-03-06T18:10:15,035 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:15,035 command_set.c:300:29: warning: ‘%s’ directive writing 12 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2026-03-06T18:10:15,036 300 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,idx_prefix,c); 2026-03-06T18:10:15,036 | ^~ ~~~~~~~~~~ 2026-03-06T18:10:15,036 command_set.c:300:25: note: directive argument in the range [0, 1073741823] 2026-03-06T18:10:15,037 300 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,idx_prefix,c); 2026-03-06T18:10:15,037 | ^~~~~~~~~~ 2026-03-06T18:10:15,038 command_set.c:300:9: note: ‘sprintf’ output between 16 and 280 bytes into a destination of size 256 2026-03-06T18:10:15,038 300 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,idx_prefix,c); 2026-03-06T18:10:15,039 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:15,039 command_set.c:342:27: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 2026-03-06T18:10:15,040 342 | sprintf(tmppath,"%s/%s",set_opt.outdir,co_dstat); 2026-03-06T18:10:15,040 | ^ 2026-03-06T18:10:15,040 command_set.c:342:5: note: ‘sprintf’ output 2 or more bytes (assuming 257) into a destination of size 256 2026-03-06T18:10:15,041 342 | sprintf(tmppath,"%s/%s",set_opt.outdir,co_dstat); 2026-03-06T18:10:15,041 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:15,459 command_set.c: In function ‘combin_subset_pans’: 2026-03-06T18:10:15,460 command_set.c:469:29: warning: ‘%s’ directive writing 6 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2026-03-06T18:10:15,461 469 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,skch_prefix,c); 2026-03-06T18:10:15,461 | ^~ ~~~~~~~~~~~ 2026-03-06T18:10:15,462 command_set.c:469:9: note: ‘sprintf’ output between 10 and 275 bytes into a destination of size 256 2026-03-06T18:10:15,462 469 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,skch_prefix,c); 2026-03-06T18:10:15,463 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:15,463 command_set.c:475:29: warning: ‘%s’ directive writing 12 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2026-03-06T18:10:15,463 475 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,idx_prefix,c); 2026-03-06T18:10:15,464 | ^~ ~~~~~~~~~~ 2026-03-06T18:10:15,464 command_set.c:475:9: note: ‘sprintf’ output between 16 and 281 bytes into a destination of size 256 2026-03-06T18:10:15,465 475 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,idx_prefix,c); 2026-03-06T18:10:15,465 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:15,466 command_set.c:481:29: warning: ‘%s’ directive writing 6 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2026-03-06T18:10:15,466 481 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix,c); 2026-03-06T18:10:15,467 | ^~ ~~~~~~~~~~~ 2026-03-06T18:10:15,467 command_set.c:481:9: note: ‘sprintf’ output between 10 and 275 bytes into a destination of size 256 2026-03-06T18:10:15,468 481 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix,c); 2026-03-06T18:10:15,468 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:15,468 command_set.c:512:29: warning: ‘%s’ directive writing 12 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2026-03-06T18:10:15,469 512 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,idx_prefix,c); 2026-03-06T18:10:15,469 | ^~ ~~~~~~~~~~ 2026-03-06T18:10:15,470 command_set.c:512:9: note: ‘sprintf’ output between 16 and 281 bytes into a destination of size 256 2026-03-06T18:10:15,470 512 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,idx_prefix,c); 2026-03-06T18:10:15,470 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:15,471 command_set.c:523:27: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 2026-03-06T18:10:15,471 523 | sprintf(tmppath,"%s/%s",set_opt.outdir,co_dstat); 2026-03-06T18:10:15,472 | ^ 2026-03-06T18:10:15,472 command_set.c:523:5: note: ‘sprintf’ output 2 or more bytes (assuming 257) into a destination of size 256 2026-03-06T18:10:15,473 523 | sprintf(tmppath,"%s/%s",set_opt.outdir,co_dstat); 2026-03-06T18:10:15,473 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:15,903 command_set.c: In function ‘grouping_genomes’: 2026-03-06T18:10:15,904 command_set.c:574:29: warning: ‘%s’ directive writing 6 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2026-03-06T18:10:15,905 574 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,skch_prefix,c); 2026-03-06T18:10:15,905 | ^~ ~~~~~~~~~~~ 2026-03-06T18:10:15,905 command_set.c:574:9: note: ‘sprintf’ output between 10 and 275 bytes into a destination of size 256 2026-03-06T18:10:15,906 574 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,skch_prefix,c); 2026-03-06T18:10:15,906 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:15,907 command_set.c:580:29: warning: ‘%s’ directive writing 12 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2026-03-06T18:10:15,907 580 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,idx_prefix,c); 2026-03-06T18:10:15,907 | ^~ ~~~~~~~~~~ 2026-03-06T18:10:15,908 command_set.c:580:9: note: ‘sprintf’ output between 16 and 281 bytes into a destination of size 256 2026-03-06T18:10:15,908 580 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,idx_prefix,c); 2026-03-06T18:10:15,909 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:15,912 command_set.c:612:29: warning: ‘%s’ directive writing 6 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2026-03-06T18:10:15,912 612 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix,c); 2026-03-06T18:10:15,913 | ^~ ~~~~~~~~~~~ 2026-03-06T18:10:15,913 command_set.c:612:9: note: ‘sprintf’ output between 10 and 275 bytes into a destination of size 256 2026-03-06T18:10:15,914 612 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix,c); 2026-03-06T18:10:15,914 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:15,915 command_set.c:634:29: warning: ‘%s’ directive writing 12 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2026-03-06T18:10:15,916 634 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,idx_prefix,c); 2026-03-06T18:10:15,916 | ^~ ~~~~~~~~~~ 2026-03-06T18:10:15,916 command_set.c:634:9: note: ‘sprintf’ output between 16 and 281 bytes into a destination of size 256 2026-03-06T18:10:15,917 634 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,idx_prefix,c); 2026-03-06T18:10:15,917 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:15,918 command_set.c:645:27: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 2026-03-06T18:10:15,918 645 | sprintf(tmppath,"%s/%s",set_opt.outdir,co_dstat); 2026-03-06T18:10:15,919 | ^ 2026-03-06T18:10:15,919 command_set.c:645:5: note: ‘sprintf’ output 2 or more bytes (assuming 257) into a destination of size 256 2026-03-06T18:10:15,919 645 | sprintf(tmppath,"%s/%s",set_opt.outdir,co_dstat); 2026-03-06T18:10:15,920 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:16,572 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-eDAWto/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ikssdheaders -I/usr/include/python3.9 -c command_shuffle.c -o build/temp.linux-armv7l-cpython-39/command_shuffle.o -fopenmp 2026-03-06T18:10:17,253 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-eDAWto/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ikssdheaders -I/usr/include/python3.9 -c global_basic.c -o build/temp.linux-armv7l-cpython-39/global_basic.o -fopenmp 2026-03-06T18:10:17,618 global_basic.c: In function ‘organize_infile_list’: 2026-03-06T18:10:17,619 global_basic.c:195:20: warning: implicit declaration of function ‘isspace’ [-Wimplicit-function-declaration] 2026-03-06T18:10:17,619 195 | while (isspace(*buf)) buf++; 2026-03-06T18:10:17,620 | ^~~~~~~ 2026-03-06T18:10:17,620 global_basic.c:201:69: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 6 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 2026-03-06T18:10:17,622 201 | "the input list: %s\n %dth line: %s has %lu characters exceed the maximal allowed length %d", 2026-03-06T18:10:17,622 | ~~^ 2026-03-06T18:10:17,623 | | 2026-03-06T18:10:17,623 | long unsigned int 2026-03-06T18:10:17,624 | %u 2026-03-06T18:10:17,625 202 | list_path, file_num, buf, strlen(buf), PATHLEN); 2026-03-06T18:10:17,625 | ~~~~~~~~~~~ 2026-03-06T18:10:17,626 | | 2026-03-06T18:10:17,627 | size_t {aka unsigned int} 2026-03-06T18:10:17,628 global_basic.c:233:69: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 6 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 2026-03-06T18:10:17,629 233 | "the input list: %s\n %dth line: %s has %lu characters exceed the maximal allowed length %d", 2026-03-06T18:10:17,630 | ~~^ 2026-03-06T18:10:17,631 | | 2026-03-06T18:10:17,632 | long unsigned int 2026-03-06T18:10:17,633 | %u 2026-03-06T18:10:17,633 234 | list_path, file_num, buf, strlen(buf), PATHLEN); 2026-03-06T18:10:17,634 | ~~~~~~~~~~~ 2026-03-06T18:10:17,635 | | 2026-03-06T18:10:17,635 | size_t {aka unsigned int} 2026-03-06T18:10:19,257 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-eDAWto/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ikssdheaders -I/usr/include/python3.9 -c iseq2comem.c -o build/temp.linux-armv7l-cpython-39/iseq2comem.o -fopenmp 2026-03-06T18:10:19,626 iseq2comem.c: In function ‘reads2mco’: 2026-03-06T18:10:19,627 iseq2comem.c:156:18: warning: comparison of integer expressions of different signedness: ‘llong’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 2026-03-06T18:10:19,628 156 | if (base > TL) { 2026-03-06T18:10:19,628 | ^ 2026-03-06T18:10:19,629 iseq2comem.c:160:26: warning: comparison of integer expressions of different signedness: ‘llong’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 2026-03-06T18:10:19,629 160 | if ((pfilter >= dim_end) || (pfilter < dim_start)) continue; 2026-03-06T18:10:19,630 | ^~ 2026-03-06T18:10:19,630 iseq2comem.c:160:50: warning: comparison of integer expressions of different signedness: ‘llong’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 2026-03-06T18:10:19,631 160 | if ((pfilter >= dim_end) || (pfilter < dim_start)) continue; 2026-03-06T18:10:19,631 | ^ 2026-03-06T18:10:19,632 iseq2comem.c: In function ‘fasta2co’: 2026-03-06T18:10:19,632 iseq2comem.c:213:69: warning: too many arguments for format [-Wformat-extra-args] 2026-03-06T18:10:19,633 213 | if ((infp = popen(fas_fname, "r")) == NULL) fprintf(stderr, "fasta2co():%s", fas_fname, "\n"); 2026-03-06T18:10:19,633 | ^~~~~~~~~~~~~~~ 2026-03-06T18:10:19,634 iseq2comem.c:219:69: warning: too many arguments for format [-Wformat-extra-args] 2026-03-06T18:10:19,634 219 | if ((infp = popen(fas_fname, "r")) == NULL) fprintf(stderr, "fasta2co():%s", fas_fname, "\n"); 2026-03-06T18:10:19,635 | ^~~~~~~~~~~~~~~ 2026-03-06T18:10:19,635 iseq2comem.c:261:18: warning: comparison of integer expressions of different signedness: ‘llong’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 2026-03-06T18:10:19,636 261 | if (base > TL) { 2026-03-06T18:10:19,636 | ^ 2026-03-06T18:10:19,637 iseq2comem.c:265:26: warning: comparison of integer expressions of different signedness: ‘llong’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 2026-03-06T18:10:19,637 265 | if ((pfilter >= dim_end) || (pfilter < dim_start)) continue; 2026-03-06T18:10:19,638 | ^~ 2026-03-06T18:10:19,638 iseq2comem.c:265:50: warning: comparison of integer expressions of different signedness: ‘llong’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 2026-03-06T18:10:19,639 265 | if ((pfilter >= dim_end) || (pfilter < dim_start)) continue; 2026-03-06T18:10:19,639 | ^ 2026-03-06T18:10:19,639 iseq2comem.c: In function ‘fastq2co’: 2026-03-06T18:10:19,640 iseq2comem.c:295:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long long unsigned int’ [-Wsign-compare] 2026-03-06T18:10:19,640 295 | if (M >= CT_MAX) fprintf(stderr, "fastq2co(): Occurence num should smaller than %d", (int) CT_MAX); 2026-03-06T18:10:19,641 | ^~ 2026-03-06T18:10:19,641 iseq2comem.c:307:68: warning: too many arguments for format [-Wformat-extra-args] 2026-03-06T18:10:19,642 307 | if ((infp = popen(fq_fname, "r")) == NULL) fprintf(stderr, "fastq2co():%s", fq_fname, "\n"); 2026-03-06T18:10:19,642 | ^~~~~~~~~~~~~~~ 2026-03-06T18:10:19,643 iseq2comem.c:313:68: warning: too many arguments for format [-Wformat-extra-args] 2026-03-06T18:10:19,643 313 | if ((infp = popen(fq_fname, "r")) == NULL) fprintf(stderr, "fastq2co():%s", fq_fname, "\n"); 2026-03-06T18:10:19,644 | ^~~~~~~~~~~~~~~ 2026-03-06T18:10:19,644 iseq2comem.c:352:18: warning: comparison of integer expressions of different signedness: ‘llong’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 2026-03-06T18:10:19,645 352 | if (base > TL) { 2026-03-06T18:10:19,645 | ^ 2026-03-06T18:10:19,646 iseq2comem.c:356:26: warning: comparison of integer expressions of different signedness: ‘llong’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 2026-03-06T18:10:19,646 356 | if ((pfilter >= dim_end) || (pfilter < dim_start)) continue; 2026-03-06T18:10:19,646 | ^~ 2026-03-06T18:10:19,647 iseq2comem.c:356:50: warning: comparison of integer expressions of different signedness: ‘llong’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 2026-03-06T18:10:19,647 356 | if ((pfilter >= dim_end) || (pfilter < dim_start)) continue; 2026-03-06T18:10:19,648 | ^ 2026-03-06T18:10:19,648 iseq2comem.c:375:44: warning: comparison of integer expressions of different signedness: ‘long long unsigned int’ and ‘int’ [-Wsign-compare] 2026-03-06T18:10:19,649 375 | if (!((co[n] & CT_MAX) < M)) co[n] |= CT_MAX; 2026-03-06T18:10:19,649 | ^ 2026-03-06T18:10:19,650 iseq2comem.c: In function ‘fastq2koc’: 2026-03-06T18:10:19,650 iseq2comem.c:403:68: warning: too many arguments for format [-Wformat-extra-args] 2026-03-06T18:10:19,651 403 | if ((infp = popen(fq_fname, "r")) == NULL) fprintf(stderr, "fastq2koc():%s", fq_fname, "\n"); 2026-03-06T18:10:19,651 | ^~~~~~~~~~~~~~~~ 2026-03-06T18:10:19,651 iseq2comem.c:409:68: warning: too many arguments for format [-Wformat-extra-args] 2026-03-06T18:10:19,652 409 | if ((infp = popen(fq_fname, "r")) == NULL) fprintf(stderr, "fastq2koc():%s", fq_fname, "\n"); 2026-03-06T18:10:19,652 | ^~~~~~~~~~~~~~~~ 2026-03-06T18:10:19,653 iseq2comem.c:448:18: warning: comparison of integer expressions of different signedness: ‘llong’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 2026-03-06T18:10:19,653 448 | if (base > TL) { 2026-03-06T18:10:19,654 | ^ 2026-03-06T18:10:19,654 iseq2comem.c:452:26: warning: comparison of integer expressions of different signedness: ‘llong’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 2026-03-06T18:10:19,655 452 | if ((pfilter >= dim_end) || (pfilter < dim_start)) continue; 2026-03-06T18:10:19,655 | ^~ 2026-03-06T18:10:19,656 iseq2comem.c:452:50: warning: comparison of integer expressions of different signedness: ‘llong’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 2026-03-06T18:10:19,656 452 | if ((pfilter >= dim_end) || (pfilter < dim_start)) continue; 2026-03-06T18:10:19,657 | ^ 2026-03-06T18:10:19,665 iseq2comem.c: In function ‘mt_shortreads2koc’: 2026-03-06T18:10:19,666 iseq2comem.c:628:34: warning: comparison of integer expressions of different signedness: ‘llong’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 2026-03-06T18:10:19,666 628 | if ((pfilter >= dim_end) || (pfilter < dim_start)) continue; 2026-03-06T18:10:19,667 | ^~ 2026-03-06T18:10:19,667 iseq2comem.c:628:58: warning: comparison of integer expressions of different signedness: ‘llong’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare] 2026-03-06T18:10:19,668 628 | if ((pfilter >= dim_end) || (pfilter < dim_start)) continue; 2026-03-06T18:10:19,668 | ^ 2026-03-06T18:10:22,570 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-eDAWto/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ikssdheaders -I/usr/include/python3.9 -c mman.c -o build/temp.linux-armv7l-cpython-39/mman.o -fopenmp 2026-03-06T18:10:22,727 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-eDAWto/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ikssdheaders -I/usr/include/python3.9 -c mytime.c -o build/temp.linux-armv7l-cpython-39/mytime.o -fopenmp 2026-03-06T18:10:23,022 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-eDAWto/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ikssdheaders -I/usr/include/python3.9 -c pykssd.c -o build/temp.linux-armv7l-cpython-39/pykssd.o -fopenmp 2026-03-06T18:10:23,792 pykssd.c: In function ‘py_dist_dispatch’: 2026-03-06T18:10:23,793 pykssd.c:436:13: warning: unused variable ‘state1’ [-Wunused-variable] 2026-03-06T18:10:23,794 436 | int state1 = dist_dispatch(&dist_opt_val1); 2026-03-06T18:10:23,794 | ^~~~~~ 2026-03-06T18:10:23,796 pykssd.c:501:13: warning: unused variable ‘state2’ [-Wunused-variable] 2026-03-06T18:10:23,796 501 | int state2 = dist_dispatch(&dist_opt_val2); 2026-03-06T18:10:23,797 | ^~~~~~ 2026-03-06T18:10:23,800 pykssd.c:635:13: warning: unused variable ‘state4’ [-Wunused-variable] 2026-03-06T18:10:23,801 635 | int state4 = dist_dispatch(&dist_opt_val4); 2026-03-06T18:10:23,801 | ^~~~~~ 2026-03-06T18:10:24,167 pykssd.c: In function ‘rename_file’: 2026-03-06T18:10:24,168 pykssd.c:64:5: warning: ‘strncpy’ specified bound depends on the length of the source argument [-Wstringop-overflow=] 2026-03-06T18:10:24,169 64 | strncpy(newfile, p1, len - suffix_len); 2026-03-06T18:10:24,169 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2026-03-06T18:10:24,170 pykssd.c:50:15: note: length computed here 2026-03-06T18:10:24,170 50 | int len = strlen(p1); 2026-03-06T18:10:24,171 | ^~~~~~~~~~ 2026-03-06T18:10:25,440 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/co2mco.o build/temp.linux-armv7l-cpython-39/command_composite.o build/temp.linux-armv7l-cpython-39/command_dist.o build/temp.linux-armv7l-cpython-39/command_dist_wrapper.o build/temp.linux-armv7l-cpython-39/command_set.o build/temp.linux-armv7l-cpython-39/command_shuffle.o build/temp.linux-armv7l-cpython-39/global_basic.o build/temp.linux-armv7l-cpython-39/iseq2comem.o build/temp.linux-armv7l-cpython-39/mman.o build/temp.linux-armv7l-cpython-39/mytime.o build/temp.linux-armv7l-cpython-39/pykssd.o -L/usr/lib -lz -o build/lib.linux-armv7l-cpython-39/kssdtool.cpython-39-arm-linux-gnueabihf.so -fopenmp 2026-03-06T18:10:25,857 /usr/local/lib/python3.9/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2026-03-06T18:10:25,858 !! 2026-03-06T18:10:25,859 ******************************************************************************** 2026-03-06T18:10:25,859 Please avoid running ``setup.py`` directly. 2026-03-06T18:10:25,860 Instead, use pypa/build, pypa/installer or other 2026-03-06T18:10:25,861 standards-based tools. 2026-03-06T18:10:25,862 This deprecation is overdue, please update your project and remove deprecated 2026-03-06T18:10:25,862 calls to avoid build errors in the future. 2026-03-06T18:10:25,863 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2026-03-06T18:10:25,863 ******************************************************************************** 2026-03-06T18:10:25,864 !! 2026-03-06T18:10:25,865 self.initialize_options() 2026-03-06T18:10:25,919 installing to build/bdist.linux-armv7l/wheel 2026-03-06T18:10:25,920 running install 2026-03-06T18:10:25,972 running install_lib 2026-03-06T18:10:26,034 creating build/bdist.linux-armv7l/wheel 2026-03-06T18:10:26,038 copying build/lib.linux-armv7l-cpython-39/kssdutils.py -> build/bdist.linux-armv7l/wheel/. 2026-03-06T18:10:26,043 copying build/lib.linux-armv7l-cpython-39/kssdtool.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/. 2026-03-06T18:10:26,065 running install_egg_info 2026-03-06T18:10:26,144 Copying kssdutils.egg-info to build/bdist.linux-armv7l/wheel/./kssdutils-1.2.1-py3.9.egg-info 2026-03-06T18:10:26,165 running install_scripts 2026-03-06T18:10:26,280 creating build/bdist.linux-armv7l/wheel/kssdutils-1.2.1.dist-info/WHEEL 2026-03-06T18:10:26,286 creating '/tmp/pip-wheel-gezs4gnj/kssdutils-1.2.1-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2026-03-06T18:10:26,514 adding 'kssdtool.cpython-39-arm-linux-gnueabihf.so' 2026-03-06T18:10:26,527 adding 'kssdutils.py' 2026-03-06T18:10:26,531 adding 'kssdutils-1.2.1.dist-info/METADATA' 2026-03-06T18:10:26,534 adding 'kssdutils-1.2.1.dist-info/WHEEL' 2026-03-06T18:10:26,536 adding 'kssdutils-1.2.1.dist-info/dependency_links.txt' 2026-03-06T18:10:26,538 adding 'kssdutils-1.2.1.dist-info/top_level.txt' 2026-03-06T18:10:26,539 adding 'kssdutils-1.2.1.dist-info/RECORD' 2026-03-06T18:10:26,548 removing build/bdist.linux-armv7l/wheel 2026-03-06T18:10:26,796 Building wheel for kssdutils (setup.py): finished with status 'done' 2026-03-06T18:10:26,805 Created wheel for kssdutils: filename=kssdutils-1.2.1-cp39-cp39-linux_armv7l.whl size=179822 sha256=18b02cc11b46e92433f41505fa10f920e12890e34304ecfb64a57b223062f9f6 2026-03-06T18:10:26,806 Stored in directory: /tmp/pip-ephem-wheel-cache-oab1i6io/wheels/84/03/53/f227c809401a14f64601afb29839a1aac41d92214d8e9c5048 2026-03-06T18:10:26,823 Successfully built kssdutils 2026-03-06T18:10:26,844 Removed build tracker: '/tmp/pip-req-tracker-9ndjftp3'